Carg28273 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCATAGATCAAACCACGACACAAATTCTTAACTTTTTGTGGAAAAATAGGAAACAAAATGGAGAATTCAACCACAAAGACCAACAAGCTGACTGATGAACCTGATGTTCATTCTCATTCTACTCTCTGTGATTGCATCCTACACTTTTTCATCGCCATTTTGAGTTATTTCGGATTTAATCACCGTGGACGTTATCGACCAACACCCGATGAACCTGTAAGTCGCTCTTTCTCTTACTGTGTTTTCCTTTTTTTTCTCTTAATTTAAAAAATATGACGAGAGAAAGAAAATGAAGAATTAATATATACATGTTTGTGTTGGGTTTGATAGGAGGAGGAAAGTGAGTACTTTAGAGGGCATGCTCCTCCTCCACCGCCGTGGAGCACCGGCGGCGGTGGTCAAACCGACTAAGATATTGTAACTAGCATCGCCTCGTTTTAGATCTGTGTAGCAATGTAATATGTATTATAGTGTATGAAGTAGCAAACCAAAATTCCAAGCTTCTCTCTTTCTATAATTTAAAATAATTTATTAATTACTTTTTTAATTTCAAACAATATATA AAAACCATAGATCAAACCACGACACAAATTCTTAACTTTTTGTGGAAAAATAGGAAACAAAATGGAGAATTCAACCACAAAGACCAACAAGCTGACTGATGAACCTGATGTTCATTCTCATTCTACTCTCTGTGATTGCATCCTACACTTTTTCATCGCCATTTTGAGTTATTTCGGATTTAATCACCGTGGACGTTATCGACCAACACCCGATGAACCTGAGGAGGAAAGTGAGTACTTTAGAGGGCATGCTCCTCCTCCACCGCCGTGGAGCACCGGCGGCGGTGGTCAAACCGACTAAGATATTGTAACTAGCATCGCCTCGTTTTAGATCTGTGTAGCAATGTAATATGTATTATAGTGTATGAAGTAGCAAACCAAAATTCCAAGCTTCTCTCTTTCTATAATTTAAAATAATTTATTAATTACTTTTTTAATTTCAAACAATATATA ATGGAGAATTCAACCACAAAGACCAACAAGCTGACTGATGAACCTGATGTTCATTCTCATTCTACTCTCTGTGATTGCATCCTACACTTTTTCATCGCCATTTTGAGTTATTTCGGATTTAATCACCGTGGACGTTATCGACCAACACCCGATGAACCTGAGGAGGAAAGTGAGTACTTTAGAGGGCATGCTCCTCCTCCACCGCCGTGGAGCACCGGCGGCGGTGGTCAAACCGACTAA MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD Homology
BLAST of Carg28273 vs. NCBI nr
Match: KAG7024354.1 (hypothetical protein SDJN02_13168 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 173.3 bits (438), Expect = 8.2e-40 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg28273 vs. NCBI nr
Match: KAG6592221.1 (hypothetical protein SDJN03_14567, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.2 bits (430), Expect = 6.9e-39 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Carg28273 vs. NCBI nr
Match: XP_038886557.1 (uncharacterized protein LOC120076731 [Benincasa hispida]) HSP 1 Score: 87.8 bits (216), Expect = 4.5e-14 Identity = 49/94 (52.13%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Carg28273 vs. NCBI nr
Match: XP_008464348.1 (PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]) HSP 1 Score: 68.2 bits (165), Expect = 3.7e-08 Identity = 47/107 (43.93%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Carg28273 vs. NCBI nr
Match: KAA0039201.1 (uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa] >TYK18468.1 uncharacterized protein E5676_scaffold607G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 3.7e-08 Identity = 47/107 (43.93%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Carg28273 vs. ExPASy TrEMBL
Match: A0A5D3D4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00380 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08 Identity = 47/107 (43.93%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Carg28273 vs. ExPASy TrEMBL
Match: A0A1S3CLD8 (uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08 Identity = 47/107 (43.93%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Carg28273 vs. ExPASy TrEMBL
Match: A0A0A0KBZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020160 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07 Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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