Carg28238 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28238
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	two-component response regulator ORR26-like
Location	Carg_Chr04: 16037805 .. 16038563 (-)
RNA-Seq Expression	Carg28238
Synteny	Carg28238

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATACAAAGCACAAGTAGAGTCCATGAAAAGGGGGAGAAAAAATAAATTAGTTCCATGGATGGAAGCATCCAAATTCAATTTCTCAGTCCGGACTCAACTTCCTCCGTTGGTGCAAAAGCAGCAGAATCATGAGGCAAACAAATCTACACAGCAGAATCATGAGACAAACAAATCTACACACGGAGGTTCAACCTCTCTTTCAGGAGGGAAAAGATTCCGACTTATTGCTCCTAAGCCTGTGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGCATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCCAAAGGTAACTTCTTCTCGTGTATTTGATGAAATTCAGTTCTCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTCAGTTGATGTCAAAGAACATTGCTTTACCTGATTCAACCAACTTGGACAATGTTGCTGCAAATTTTGTAAATGAAGGAAGCCAACAACAATTAGCAGAATATGATTATCTCTTAAATGTTTTAGAAGACGATCCACCCGACTTTGGCAGCGACTTTGATCTGAGTGATGTAGATAAATACAGCGAGTGGCTAAGGAACACTATTCTGGAAAACGGAAGCGGTCCAGATAGCTTTATCAATGACAATGCAGAAAACTTTCAAGTTGAAATCAATCAATAA

mRNA sequence

AAATACAAAGCACAAGTAGAGTCCATGAAAAGGGGGAGAAAAAATAAATTAGTTCCATGGATGGAAGCATCCAAATTCAATTTCTCAGTCCGGACTCAACTTCCTCCGTTGGTGCAAAAGCAGCAGAATCATGAGGCAAACAAATCTACACAGCAGAATCATGAGACAAACAAATCTACACACGGAGGTTCAACCTCTCTTTCAGGAGGGAAAAGATTCCGACTTATTGCTCCTAAGCCTGTGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGCATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCCAAAGGTAACTTCTTCTCGTGTATTTGATGAAATTCAGTTCTCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTCAGTTGATGTCAAAGAACATTGCTTTACCTGATTCAACCAACTTGGACAATGTTGCTGCAAATTTTGTAAATGAAGGAAGCCAACAACAATTAGCAGAATATGATTATCTCTTAAATGTTTTAGAAGACGATCCACCCGACTTTGGCAGCGACTTTGATCTGAGTGATGTAGATAAATACAGCGAGTGGCTAAGGAACACTATTCTGGAAAACGGAAGCGGTCCAGATAGCTTTATCAATGACAATGCAGAAAACTTTCAAGTTGAAATCAATCAATAA

Coding sequence (CDS)

ATGAAAAGGGGGAGAAAAAATAAATTAGTTCCATGGATGGAAGCATCCAAATTCAATTTCTCAGTCCGGACTCAACTTCCTCCGTTGGTGCAAAAGCAGCAGAATCATGAGGCAAACAAATCTACACAGCAGAATCATGAGACAAACAAATCTACACACGGAGGTTCAACCTCTCTTTCAGGAGGGAAAAGATTCCGACTTATTGCTCCTAAGCCTGTGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGCATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCCAAAGGTAACTTCTTCTCGTGTATTTGATGAAATTCAGTTCTCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTCAGTTGATGTCAAAGAACATTGCTTTACCTGATTCAACCAACTTGGACAATGTTGCTGCAAATTTTGTAAATGAAGGAAGCCAACAACAATTAGCAGAATATGATTATCTCTTAAATGTTTTAGAAGACGATCCACCCGACTTTGGCAGCGACTTTGATCTGAGTGATGTAGATAAATACAGCGAGTGGCTAAGGAACACTATTCTGGAAAACGGAAGCGGTCCAGATAGCTTTATCAATGACAATGCAGAAAACTTTCAAGTTGAAATCAATCAATAA

Protein sequence

MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ

Homology

[Close]

BLAST of Carg28238 vs. NCBI nr
Match: KAG7032530.1 (hypothetical protein SDJN02_06579 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.6 bits (1246), Expect = 5.1e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLS 60
           MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLS
Sbjct: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLS 60

Query: 61  GGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSS 120
           GGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSS
Sbjct: 61  GGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSS 120

Query: 121 RVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQ 180
           RVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQ
Sbjct: 121 RVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQ 180

Query: 181 QQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQV 240
           QQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQV
Sbjct: 181 QQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQV 240

Query: 241 EINQ 245
           EINQ
Sbjct: 241 EINQ 244

[Close]

BLAST of Carg28238 vs. NCBI nr
Match: XP_022990810.1 (two-component response regulator ORR26-like [Cucurbita maxima])

HSP 1 Score: 401.0 bits (1029), Expect = 7.5e-108
Identity = 208/254 (81.89%), Postives = 220/254 (86.61%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +K+G+KNKL P MEASKF+ SV+TQLPPLV +          QQNHEANKSTQQNHE NK
Sbjct: 297 IKKGKKNKLAPRMEASKFDCSVKTQLPPLVLRQQNHEANKSIQQNHEANKSTQQNHEANK 356

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI
Sbjct: 357 STQGGSTSLSGGKRFRLIAPKPALNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 416

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF D+HQ DVAQQLEAMEF GTSEGIQLMSKNIALPDSTNLDN+
Sbjct: 417 NKTTPEVTSYRAFDEIQFPDMHQVDVAQQLEAMEFIGTSEGIQLMSKNIALPDSTNLDNI 476

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEGSQQQ AEYDYLLNVLEDDP D  +DF LSDVDKYSEWLRNT+LENGS  DS 
Sbjct: 477 AANFGNEGSQQQFAEYDYLLNVLEDDPYDLRNDFSLSDVDKYSEWLRNTVLENGSSLDSL 536

Query: 241 INDNAENFQVEINQ 245
           INDN ENF V+INQ
Sbjct: 537 INDNLENFPVKINQ 550

[Close]

BLAST of Carg28238 vs. NCBI nr
Match: XP_022952593.1 (putative two-component response regulator-like APRR6 isoform X2 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 316 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 375

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 376 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 435

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 436 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 495

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 496 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 555

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 556 INDEAENFPVEIN 568

[Close]

BLAST of Carg28238 vs. NCBI nr
Match: XP_022952584.1 (putative two-component response regulator-like APRR6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 319 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 378

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 379 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 438

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 439 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 498

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 499 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 558

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 559 INDEAENFPVEIN 571

[Close]

BLAST of Carg28238 vs. NCBI nr
Match: XP_022952602.1 (putative two-component response regulator-like APRR6 isoform X3 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 306 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 365

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 366 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 425

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 426 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 485

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 486 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 545

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 546 INDEAENFPVEIN 558

[Close]

BLAST of Carg28238 vs. ExPASy TrEMBL
Match: A0A6J1JR42 (two-component response regulator ORR26-like OS=Cucurbita maxima OX=3661 GN=LOC111487593 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.6e-108
Identity = 208/254 (81.89%), Postives = 220/254 (86.61%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +K+G+KNKL P MEASKF+ SV+TQLPPLV +          QQNHEANKSTQQNHE NK
Sbjct: 297 IKKGKKNKLAPRMEASKFDCSVKTQLPPLVLRQQNHEANKSIQQNHEANKSTQQNHEANK 356

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI
Sbjct: 357 STQGGSTSLSGGKRFRLIAPKPALNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 416

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF D+HQ DVAQQLEAMEF GTSEGIQLMSKNIALPDSTNLDN+
Sbjct: 417 NKTTPEVTSYRAFDEIQFPDMHQVDVAQQLEAMEFIGTSEGIQLMSKNIALPDSTNLDNI 476

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEGSQQQ AEYDYLLNVLEDDP D  +DF LSDVDKYSEWLRNT+LENGS  DS 
Sbjct: 477 AANFGNEGSQQQFAEYDYLLNVLEDDPYDLRNDFSLSDVDKYSEWLRNTVLENGSSLDSL 536

Query: 241 INDNAENFQVEINQ 245
           INDN ENF V+INQ
Sbjct: 537 INDNLENFPVKINQ 550

[Close]

BLAST of Carg28238 vs. ExPASy TrEMBL
Match: A0A6J1GKU9 (putative two-component response regulator-like APRR6 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.8e-107
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 306 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 365

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 366 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 425

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 426 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 485

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 486 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 545

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 546 INDEAENFPVEIN 558

[Close]

BLAST of Carg28238 vs. ExPASy TrEMBL
Match: A0A6J1GL19 (putative two-component response regulator-like APRR6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.8e-107
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 316 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 375

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 376 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 435

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 436 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 495

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 496 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 555

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 556 INDEAENFPVEIN 568

[Close]

BLAST of Carg28238 vs. ExPASy TrEMBL
Match: A0A6J1GM46 (putative two-component response regulator-like APRR6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.8e-107
Identity = 208/253 (82.21%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNK 60
           +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNK
Sbjct: 319 IRKGRKNKLAPRMEASKFDCSVTTQLPPSVQRHQNHEANNSIQQNHEANKSTQQNHETNK 378

Query: 61  STHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI 120
           ST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPY+I
Sbjct: 379 STQGGSTSLSGGKRFRLIAPKPPLNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNI 438

Query: 121 NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNV 180
           NKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+
Sbjct: 439 NKTTPEVTSYRAFDEIQFPDIHQVDAAQQLEAMEFCGTSEGIQLMSKNIALPGSTNLDNI 498

Query: 181 AANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSF 240
           AANF NEG QQQ AEYDYLLNVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSF
Sbjct: 499 AANFGNEGIQQQFAEYDYLLNVLEDDPYDFRNDFSLSDVDKYSEWLRNTILEDESGLDSF 558

Query: 241 INDNAENFQVEIN 244
           IND AENF VEIN
Sbjct: 559 INDEAENFPVEIN 571

[Close]

BLAST of Carg28238 vs. ExPASy TrEMBL
Match: A0A6J1GRD9 (two-component response regulator ORR26-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456349 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.9e-81
Identity = 170/252 (67.46%), Postives = 189/252 (75.00%), Query Frame = 0


Query: 1   MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLS 60
           MK+GR+NKL P  E SKFNFSVRTQLPP +  +Q H+         E N ST GGSTS  
Sbjct: 316 MKKGRENKLAPRRETSKFNFSVRTQLPPPLVPKQPHD---------EANSSTKGGSTSFI 375

Query: 61  GGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSS 120
           GG+RFRLIAP+PVPNP L VSANF NHGL MLD NF+HV SNY SVPY IN+TTP+VTSS
Sbjct: 376 GGERFRLIAPRPVPNPTLPVSANFANHGLIMLDQNFRHVDSNYYSVPYIINQTTPEVTSS 435

Query: 121 RVFDEIQFSDIHQADVAQQ---------LEAMEFSGTSEGIQLMSKNIALPDSTNLDNVA 180
            VFD  QFSD +  DV QQ          EAME +GTSEGIQLMS N+A P STNLDN+A
Sbjct: 436 CVFDGTQFSD-NPLDVVQQDLTAFKIGNQEAMECNGTSEGIQLMSNNMAFPYSTNLDNIA 495

Query: 181 ANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFI 240
           ANF NEGSQQQ AEYDYLLN LEDDP DF SD +LSDVDKYSEWL+NT+LEN SGPDSF+
Sbjct: 496 ANFGNEGSQQQSAEYDYLLNFLEDDPHDFDSDLNLSDVDKYSEWLKNTVLENRSGPDSFL 555

Query: 241 NDNAENFQVEIN 244
            DN ENF +  N
Sbjct: 556 GDNTENFPMGNN 557

The following BLAST results are available for this feature:

BLAST of Carg28238 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032530.1	5.1e-133	100.00	hypothetical protein SDJN02_06579 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022990810.1	7.5e-108	81.89	two-component response regulator ORR26-like [Cucurbita maxima]	[more]
XP_022952593.1	1.4e-106	82.21	putative two-component response regulator-like APRR6 isoform X2 [Cucurbita mosch...	[more]
XP_022952584.1	1.4e-106	82.21	putative two-component response regulator-like APRR6 isoform X1 [Cucurbita mosch...	[more]
XP_022952602.1	1.4e-106	82.21	putative two-component response regulator-like APRR6 isoform X3 [Cucurbita mosch...	[more]

BLAST of Carg28238 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg28238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JR42	3.6e-108	81.89	two-component response regulator ORR26-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GKU9	6.8e-107	82.21	putative two-component response regulator-like APRR6 isoform X3 OS=Cucurbita mos...	[more]
A0A6J1GL19	6.8e-107	82.21	putative two-component response regulator-like APRR6 isoform X2 OS=Cucurbita mos...	[more]
A0A6J1GM46	6.8e-107	82.21	putative two-component response regulator-like APRR6 isoform X1 OS=Cucurbita mos...	[more]
A0A6J1GRD9	4.9e-81	67.46	two-component response regulator ORR26-like isoform X1 OS=Cucurbita moschata OX=...	[more]

BLAST of Carg28238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28238-RA	Carg28238-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016301	kinase activity