Carg28203 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28203
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein BUD31-like protein
Location	Carg_Chr13: 2918688 .. 2920740 (-)
RNA-Seq Expression	Carg28203
Synteny	Carg28203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGACTCACAATTCAAATCAATGTGAGCATTTCTGTTTACATTCACATTTATTATTGTCCATGCAAGAAGATTTATATAAAAACACTATCGAACTTACCGGAATTTAGTAGTATACGCTAACAACAGAATACAGACAACAGATTTCACGCAGATTCAACTACAGTCTCAAACAATCCAATATCAATAGTTCACAATCAAGGTGCTAGCCACCGTATCAACTGTACTTGTATTCAAGCTAGCACAGCAAGTCAGTACGGAGCTTATATATCGAATTACAGATCGGAAGAATGGTTGACAAAGAAAAAATCTCTACTTGAACAGGTTTCGTTCACTATACCTATGAAATTTCGTTGGACCCTGAAATGATGCATTGGAAGAATCTTTTTGGGCTCTCCAAGCACAGACGTCTTGTTCACTGGAATCCAGAAGGGAAAAAATAATGTTTGTTGCGACTGAAACTATCTAAATAAGTGGTTTGGGTATGAATGATACCTTTTTCCATTTAGCAATGAGGTTGGCCATCTGATAGCCTCTGCTTCTAAGCAGATCACCATAGAGCTCCCTGGATATTGCACCCTGTTGTGGAAATAAGGTCAAAAATGTATCGCCGCCACTCCTAACTTGATCTGCAGCTTCACTCCCACCCACAACGTTCCCTTCACACCTTCCGCGTTCCGCCATTGCCCAGCCTTGCACGCGACATATAATAGTGCGAGGTGTGGTAAGAGACTAAACACACAAAAATAACCCTAAAAACATCACAAAAGAAAGAAAAGGAACTTGAGAATAAACAATATAATCAATCCACAGCTGAACCTCGTCAGCGGGAAATAACATAAGACATCGCCATCACGTCTATGCGCGGCCGAATTTGAATTGTACACTTTCTATAGCGTACTAGGTCTCTCAAAGCTATTCTTCGTATACTTTATTCTTTTTTTTGAAGCGGACCGCCTCTCGTAGCGAGTAATTGGTCTCTACAAATCATTGCCTTAAAACGAGGACGGAAAAGGGCTAAGCTTTTGGCACCTTGATATATTATCCTGGATATTATTCTCTCTCTAAGTTCTTGTGCTTTCTTTTGTGATGTTTTTAGGGTTATTTTTGTGTTGTTTTGCAGCTGAAATTGATCCGCAGGATGGGAAGCGGAAGTGTGAAGCATTGTGGCCTATTTTCAAGATTTCACATCAAAGGAGCCGATACATTTTTGACCTTTTCCACAAAAGGAGTGAAATATCCAGGGAGCTCTATGAGTTCTGCTTAGAACAAGGCTATGCAGATGCCAACCTCATTGCTAAATGGAAAAAGGTATTCATTCATACCCAAACCACTTCATCATAAAGATAGTTTCAGTCCAACAAAATTATTTTTCCCCTTCTGGATTCCAAGTGAACAAGACGTCTGTGCTTGGAAGAGCCAAAAGATTCTTCCAATGCATCATTTCAGGGTCCAACGAAATTCATAGGTATAGGAAGAAACCCTGTCAAGTAGAGATTTTTTCTTTCAACCATCTTCCGATTGTTAATACGATATATAAGTACTGCTACTACAAATAGTGCTACACCCTTGATTGTGAAATATTGATTGCATGTTGAACCCTGTGAATTGCGTGAAAGTAGGATACTCTAATTCCGGAAGTCTTAGTGTTTTATAAAACGTTCTTCATGGAAAAAAAATGTGAATGAAAGATCTCACTGAATTGAATTGAGTCCATGAATCTAAGAAATAGTGAGAATTCTTAGTCTCTCAGTTCGAAAATCTAGAATTTGAATTGATAGTCGTTCATTAACCAACCATTCGTCTCACCAGTGTTTGAACCTTGCATGGGTGATATTTAATATTTATGATAGTTCAGATTGGTATCTAAACAAACTCCTGTTGAAAATACAGCCAGGATATGAGCGTCTCTGTTGCCTCCGTTGCATACAGCCTCGGGACCATAACTTCGGCACGACGTGTGTCTGCCGAGTCCCGAAACACTTGAGAGAAGAGAAAGTCGTGGAGTGTGTGCATTGTGGTTGCAGGGGATGTGCCAGTGGGGATTGA

mRNA sequence

ATGTCATCGACTCACAATTCAAATCAATCTGAAATTGATCCGCAGGATGGGAAGCGGAAGTGTGAAGCATTGTGGCCTATTTTCAAGATTTCACATCAAAGGAGCCGATACATTTTTGACCTTTTCCACAAAAGGAGTGAAATATCCAGGGAGCTCTATGAGTTCTGCTTAGAACAAGGCTATGCAGATGCCAACCTCATTGCTAAATGGAAAAAGCCAGGATATGAGCGTCTCTGTTGCCTCCGTTGCATACAGCCTCGGGACCATAACTTCGGCACGACGTGTGTCTGCCGAGTCCCGAAACACTTGAGAGAAGAGAAAGTCGTGGAGTGTGTGCATTGTGGTTGCAGGGGATGTGCCAGTGGGGATTGA

Coding sequence (CDS)

ATGTCATCGACTCACAATTCAAATCAATCTGAAATTGATCCGCAGGATGGGAAGCGGAAGTGTGAAGCATTGTGGCCTATTTTCAAGATTTCACATCAAAGGAGCCGATACATTTTTGACCTTTTCCACAAAAGGAGTGAAATATCCAGGGAGCTCTATGAGTTCTGCTTAGAACAAGGCTATGCAGATGCCAACCTCATTGCTAAATGGAAAAAGCCAGGATATGAGCGTCTCTGTTGCCTCCGTTGCATACAGCCTCGGGACCATAACTTCGGCACGACGTGTGTCTGCCGAGTCCCGAAACACTTGAGAGAAGAGAAAGTCGTGGAGTGTGTGCATTGTGGTTGCAGGGGATGTGCCAGTGGGGATTGA

Protein sequence

MSSTHNSNQSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD

Homology

[Close]

BLAST of Carg28203 vs. NCBI nr
Match: KAG7019312.1 (Protein BUD31-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 9.0e-70
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSSTHNSNQSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQG 60
           MSSTHNSNQSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQG
Sbjct: 1   MSSTHNSNQSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQG 60

Query: 61  YADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCA 120
           YADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCA
Sbjct: 61  YADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCA 120

Query: 121 SGD 124
           SGD
Sbjct: 121 SGD 123

[Close]

BLAST of Carg28203 vs. NCBI nr
Match: XP_022930057.1 (protein BUD31 homolog 1-like [Cucurbita moschata] >XP_023519809.1 protein BUD31 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023519810.1 protein BUD31 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++EIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA
Sbjct: 31  EAEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. NCBI nr
Match: KAG6583640.1 (Protein BUD31-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++EIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA
Sbjct: 78  EAEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 137

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 138 KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 192

[Close]

BLAST of Carg28203 vs. NCBI nr
Match: XP_022970345.1 (protein BUD31 homolog 1-like [Cucurbita maxima] >XP_022970346.1 protein BUD31 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++EIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISREL+EFCLEQGYADANLIA
Sbjct: 31  EAEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELFEFCLEQGYADANLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCL CIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLHCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. NCBI nr
Match: XP_008461749.1 (PREDICTED: protein BUD31 homolog 1-like [Cucumis melo] >XP_008461758.1 PREDICTED: protein BUD31 homolog 1-like [Cucumis melo] >XP_008461765.1 PREDICTED: protein BUD31 homolog 1-like [Cucumis melo] >KAA0040917.1 protein BUD31-like protein 1-like [Cucumis melo var. makuwa] >TYK10620.1 protein BUD31-like protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E DPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADAN+IA
Sbjct: 31  EAENDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANIIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy Swiss-Prot
Match: Q94DE2 (Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0857700 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-59
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E D  DGKRKCEALWPIF+ISHQRSRYI+DL+++R EIS+ELYEFCL+QGYAD NLIA
Sbjct: 31  EAENDTHDGKRKCEALWPIFRISHQRSRYIYDLYYRRKEISKELYEFCLDQGYADRNLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQ RDHNF TTCVCRVPKHLREEKV+ECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy Swiss-Prot
Match: Q65WT0 (Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0446300 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-59
Identity = 97/115 (84.35%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E DP DGKRKCEALWPIF+ISHQ+SRYI+DL+++R EIS+ELYEFCL+QG+AD NLIA
Sbjct: 31  EAENDPHDGKRKCEALWPIFRISHQKSRYIYDLYYRRKEISKELYEFCLDQGHADKNLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQ RDHNF TTCVCRVPKHLREEKV+ECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy Swiss-Prot
Match: P35682 (Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0149800 PE=2 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-57
Identity = 95/124 (76.61%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MSSTHNS-NQSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQ 60
           +S  H+   ++E DP DG+RKCEALWPIFKI+HQRSRY++DL++ R EIS+ELYEFCL+Q
Sbjct: 22  LSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYLYDLYYNRKEISQELYEFCLDQ 81

Query: 61  GYADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGC 120
           G+AD NLIAKWKK GYERLCCLRCIQ RDHNF TTCVCRVPKHLREE+V+ECVHCGC+GC
Sbjct: 82  GHADRNLIAKWKKQGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEQVIECVHCGCKGC 141

Query: 121 ASGD 124
           ASGD
Sbjct: 142 ASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy Swiss-Prot
Match: Q962X9 (Protein BUD31 homolog OS=Branchiostoma belcheri OX=7741 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-47
Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E +P +GKRK EALWPIFKI HQ+SRYIFDLF++R  ISRELYE+CL++G AD NLIA
Sbjct: 31  EAETEPHEGKRKVEALWPIFKIHHQKSRYIFDLFYRRKAISRELYEYCLKEGIADKNLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKVVECVHCGCRGCA 121
           KWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L E ++VECVHCGCRGC+
Sbjct: 91  KWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEEGRIVECVHCGCRGCS 143

[Close]

BLAST of Carg28203 vs. ExPASy Swiss-Prot
Match: Q2NKU3 (Protein BUD31 homolog OS=Bos taurus OX=9913 GN=BUD31 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.6e-46
Identity = 77/113 (68.14%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E +P +GKRK E+LWPIF+I HQ++RYIFDLF+KR  ISRELYE+C+++GYAD NLIA
Sbjct: 31  EAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKVVECVHCGCRGCA 121
           KWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   +++EC HCGCRGC+
Sbjct: 91  KWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 143

[Close]

BLAST of Carg28203 vs. ExPASy TrEMBL
Match: A0A6J1EPA7 (protein BUD31 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436528 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++EIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA
Sbjct: 31  EAEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy TrEMBL
Match: A0A6J1I2L5 (protein BUD31 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469339 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++EIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISREL+EFCLEQGYADANLIA
Sbjct: 31  EAEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELFEFCLEQGYADANLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCL CIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLHCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy TrEMBL
Match: A0A1S3CFA8 (protein BUD31 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103500278 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E DPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADAN+IA
Sbjct: 31  EAENDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANIIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy TrEMBL
Match: A0A5D3CGY5 (Protein BUD31-like protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00980 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E DPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADAN+IA
Sbjct: 31  EAENDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANIIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. ExPASy TrEMBL
Match: A0A0A0LSL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153010 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E DPQDGKRKCEALWPIFKISHQRSRYIFDLF+KRSEISRELYEFCLEQGYADANLIA
Sbjct: 31  EAENDPQDGKRKCEALWPIFKISHQRSRYIFDLFYKRSEISRELYEFCLEQGYADANLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD
Sbjct: 91  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 145

[Close]

BLAST of Carg28203 vs. TAIR 10
Match: AT4G21110.1 (G10 family protein )

HSP 1 Score: 226.9 bits (577), Expect = 9.0e-60
Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 9   QSEIDPQDGKRKCEALWPIFKISHQRSRYIFDLFHKRSEISRELYEFCLEQGYADANLIA 68
           ++E D  DGKRKCE LWPIFK+SHQRSRY++DL+++R EIS+ELYEFCL+QGYAD +LIA
Sbjct: 31  EAETDSHDGKRKCETLWPIFKVSHQRSRYVYDLYYRREEISKELYEFCLDQGYADRSLIA 90

Query: 69  KWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKVVECVHCGCRGCASGD 124
           KWKK GYERLCCLRCIQPRDHN+GTTCVCRVPKHLREEKVVECVHCGC+GCASGD
Sbjct: 91  KWKKSGYERLCCLRCIQPRDHNYGTTCVCRVPKHLREEKVVECVHCGCQGCASGD 145

The following BLAST results are available for this feature:

BLAST of Carg28203 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019312.1	9.0e-70	100.00	Protein BUD31-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022930057.1	2.6e-64	98.26	protein BUD31 homolog 1-like [Cucurbita moschata] >XP_023519809.1 protein BUD31 ...	[more]
KAG6583640.1	2.6e-64	98.26	Protein BUD31-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022970345.1	2.8e-63	96.52	protein BUD31 homolog 1-like [Cucurbita maxima] >XP_022970346.1 protein BUD31 ho...	[more]
XP_008461749.1	2.8e-63	96.52	PREDICTED: protein BUD31 homolog 1-like [Cucumis melo] >XP_008461758.1 PREDICTED...	[more]

BLAST of Carg28203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94DE2	2.6e-59	85.22	Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0857700...	[more]
Q65WT0	2.6e-59	84.35	Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0446300...	[more]
P35682	4.1e-57	76.61	Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0149800...	[more]
Q962X9	2.3e-47	72.57	Protein BUD31 homolog OS=Branchiostoma belcheri OX=7741 PE=2 SV=1	[more]
Q2NKU3	5.6e-46	68.14	Protein BUD31 homolog OS=Bos taurus OX=9913 GN=BUD31 PE=2 SV=1	[more]

BLAST of Carg28203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPA7	1.2e-64	98.26	protein BUD31 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436528 PE=3 ...	[more]
A0A6J1I2L5	1.4e-63	96.52	protein BUD31 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469339 PE=3 SV...	[more]
A0A1S3CFA8	1.4e-63	96.52	protein BUD31 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103500278 PE=3 SV=1	[more]
A0A5D3CGY5	1.4e-63	96.52	Protein BUD31-like protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LSL5	4.0e-63	96.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153010 PE=3 SV=1	[more]

BLAST of Carg28203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21110.1	9.0e-60	82.61	G10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001748	G10 protein	PRINTS	PR00322	G10	coord: 25..48 score: 66.15 coord: 111..120 score: 83.75 coord: 75..100 score: 78.37 coord: 49..74 score: 71.63
IPR001748	G10 protein	PFAM	PF01125	G10	coord: 9..121 e-value: 1.1E-52 score: 177.7
IPR001748	G10 protein	PANTHER	PTHR19411	PROTEIN BUD31-RELATED	coord: 9..123
None	No IPR available	PANTHER	PTHR19411:SF6	G10, PUTATIVE-RELATED	coord: 9..123
IPR018230	BUD31/G10-related, conserved site	PROSITE	PS00998	G10_2	coord: 111..120
IPR018230	BUD31/G10-related, conserved site	PROSITE	PS00997	G10_1	coord: 78..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28203-RA	Carg28203-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005634	nucleus