Carg28119 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28119
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	golgin candidate 5-like
Location	Carg_Chr20: 10472892 .. 10475181 (-)
RNA-Seq Expression	Carg28119
Synteny	Carg28119

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGGAAATTGAATCGTTGCGAGAGGAATACATCAGAGAGTCTCAACTCTTTGGAAAAAGAGGTTTGCTTTTCTTTTTATTATATTTGTCCAACAATTCTTCTGTATGAAGTTTAATTGCTTGATGTTTACTAAAAGTAGGTTAAGACAGCTTGAGATTTTCGAAAACCTTTTTTTTCATCAACCATTACACATTTTCTTTCCATGCGGCCTGATTATTGAAGGTTTGAACTCAATGGATGCCATTAATAACATAATGTTTAGAATCTACCAAGAATCAATGGAAGTTTTTCTAGTTTCGGTTACATGATTTACTTAAATCACTTCTCTGGTTTGGAAAAAAAAGAACGTCAACGAGTTGAATATATTATTCATATTTTAGTTTCTTTGGTGATTTCTAATGCTTTTAGATAGTAACATTACAGGTATATTGCTCTTACTAAGGAGACGAATACACCTTAGGAGGAGCAAAAGTAGAAGGAGTGATGTGGCTGCTCTTTTGAAGGAAAAAGATGAAATAATAATCAAGGTTATGGCAAAAGGTGAGGAACTTCTTATATCTTTTCTTATATATGTCTAATGTATTTTCTTACCTCTAATTCTGCAGAAATGAAAAATTTCCTTATCCTAAAAAAAATATTCTGCAGAAATGACAACTGGACTAGTTGCTTTTTTCTTTCAGTGCGGTATTGTGGGGGAATAAAATATTTGCTTGTCTGCATCTCACATTCACTCAGCTCTCTGTCCTTTTTCGTTTTTGAAATATTACACCTATGCATGTTAGTAGTGTACCTATAAGTAGCAGTTTGTCTTCCTATTTGATAATAACCATTGAAACTATTTGTCTACCAAACCAGGCGAGATGCTTTCAAAGAAGCAGGCTGCTCTAAGAATCTCAGATTAGGGAAATTAAGGGCCAGGTGGTAACTTTCACTGAGATTTCGTTGGGAAAAAAAAATTATATTACTCAGACGACATACTAATTAATTGGTTTCTGAGGCATAGATAGAGAGCCTGAAGAAGAGAAGAAGGGATTAATACCAAAGCTTCAGGTAATTGACTTATCATCAGGTTTGTAAAGACATTGGATTAGATTTCTGCGATGAAGAACTGATTGTTAAAAACGTCTTTGTTCCTCTACTATCCATATATTCTGTAGTATGTTTTTGAATATGTTCATTGAAATCATGTGGGGGCACAGAAGGTTTCATTTGGAATTTTCTCTTTCCCAGAATGTATGGTCTGTGTTGCACCTATCATCTGCAAGGACTTCATTTTTTTATGCATCTCTACTTTGATTTTCACTGGTGAAGAAAATAAAGTAGATGCATCAAGAGGGACAAAACAAAAAACTGCTACAGAGAATTGCTGCAAGAAACATAGAAAAGCAACCCAAACAAGAACTAGCAGCACCAAAAGAGTACGATACCAGCTGCCTTTAACTGTTGCCAAGGAGCCGAAGCTGCTAGCAGAGCACGTGCAAACAAGTGACACCAGAACTGAGCTAAAAGTCGTCTATAGGGAGGCTGAGGAGCTGACACATGCTAGTCTCAGACACTGAAGAATTAAGACAAACATTATAGTAGAAAGGAGCAGCAGGTCTTCTCTTGTTCATTCTAAAAGTTTCATTGTAGGAAAAGTGAGCTAAAATTAAGAAATTGCAGTCAGATGACTTTATCATTAAATTTTTTTTTGCAGGCGTCTTTAGAGAAGCCCATGCTTCGTAGGGGACATCAGGACCTTCAAAGCAGTTACAGCTATGTTGCATTCTCTATTCAGTGCTCTTTAGCTTCCTTCCTACTAAACGGACCTGGGAACTGGAAAACATAAAAGGAAATTTTGGAAGATAATCTCGTTATCTTCTTTATATTTATATCTTAGCAATCCATTGTTTTACAGGCAAGTGAGCGACGTTGTGAGGAATTGATCACTCAAGGTCCCAGAGTCTACAAGGCCACTTTGAGACAGATTGAAGCAATGCAGGTCAGTAATCTTACAATGCATTTGCAGAATTCTTATGTTGATCTTGTTACTTCAAGTTCAGGCCTATGTGACTTATCTCTAACCTCTCGTATCATGATAGGAAACAACTGCTAAGAAGGGCAGAAGCGTGGGGTGCTGTTGAAGATCTCTTAACTCATAGACTTTCAGGTGTTATCGGATTTATTCTGTGCTATATCACCATTTTCCCAGCATATAGACATCAATCTTTATTGATTTTATTGAATGCACAGGAAGCAGAAGCGCAAAGCTGCTGCTGCTGAGAGACAGAGAACAATTTGTAAATGA

mRNA sequence

ATGCGGGAAATTGAATCGTTGCGAGAGGAATACATCAGAGAGTCTCAACTCTTTGGAAAAAGAGGTATATTGCTCTTACTAAGGAGACGAATACACCTTAGGAGGAGCAAAAGTAGAAGGAGTGATGTGGCTGCTCTTTTGAAGGAAAAAGATGAAATAATAATCAAGGTTATGGCAAAAGATAGAGAGCCTGAAGAAGAGAAGAAGGGATTAATACCAAAGCTTCAGGTAATTGACTTATCATCAGAATGTATGGTCTGTGTTGCACCTATCATCTGCAAGGACTTCATTTTTTTATGCATCTCTACTTTGATTTTCACTGGTGAAGAAAATAAAGTAGATGCATCAAGAGGGACAAAACAAAAAACTGCTACAGAGAATTGCTGCAAGAAACATAGAAAAGCAACCCAAACAAGAACTAGCAGCACCAAAAGAGTACGATACCAGCTGCCTTTAACTGTTGCCAAGGAGCCGAAGCTGCTAGCAGAGCACGTGCAAACAAGTGACACCAGAACTGAGCTAAAAGTCGCGTCTTTAGAGAAGCCCATGCTTCGTAGGGGACATCAGGACCTTCAAAGCAGTTACAGCTATGCAAGTGAGCGACGTTGTGAGGAATTGATCACTCAAGGTCCCAGAGTCTACAAGGCCACTTTGAGACAGATTGAAGCAATGCAGGAAACAACTGCTAAGAAGGGCAGAAGCGTGGGGAAGCAGAAGCGCAAAGCTGCTGCTGCTGAGAGACAGAGAACAATTTGTAAATGA

Coding sequence (CDS)

ATGCGGGAAATTGAATCGTTGCGAGAGGAATACATCAGAGAGTCTCAACTCTTTGGAAAAAGAGGTATATTGCTCTTACTAAGGAGACGAATACACCTTAGGAGGAGCAAAAGTAGAAGGAGTGATGTGGCTGCTCTTTTGAAGGAAAAAGATGAAATAATAATCAAGGTTATGGCAAAAGATAGAGAGCCTGAAGAAGAGAAGAAGGGATTAATACCAAAGCTTCAGGTAATTGACTTATCATCAGAATGTATGGTCTGTGTTGCACCTATCATCTGCAAGGACTTCATTTTTTTATGCATCTCTACTTTGATTTTCACTGGTGAAGAAAATAAAGTAGATGCATCAAGAGGGACAAAACAAAAAACTGCTACAGAGAATTGCTGCAAGAAACATAGAAAAGCAACCCAAACAAGAACTAGCAGCACCAAAAGAGTACGATACCAGCTGCCTTTAACTGTTGCCAAGGAGCCGAAGCTGCTAGCAGAGCACGTGCAAACAAGTGACACCAGAACTGAGCTAAAAGTCGCGTCTTTAGAGAAGCCCATGCTTCGTAGGGGACATCAGGACCTTCAAAGCAGTTACAGCTATGCAAGTGAGCGACGTTGTGAGGAATTGATCACTCAAGGTCCCAGAGTCTACAAGGCCACTTTGAGACAGATTGAAGCAATGCAGGAAACAACTGCTAAGAAGGGCAGAAGCGTGGGGAAGCAGAAGCGCAAAGCTGCTGCTGCTGAGAGACAGAGAACAATTTGTAAATGA

Protein sequence

MREIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKDREPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCISTLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLLAEHVQTSDTRTELKVASLEKPMLRRGHQDLQSSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKRKAAAAERQRTICK

Homology

[Close]

BLAST of Carg28119 vs. NCBI nr
Match: KAG7011140.1 (Golgin candidate 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MREIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAK 60
           MREIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAK
Sbjct: 1   MREIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAK 60

Query: 61  DREPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCISTLIFTGEENKVDASRGTK 120
           DREPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCISTLIFTGEENKVDASRGTK
Sbjct: 61  DREPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCISTLIFTGEENKVDASRGTK 120

Query: 121 QKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLLAEHVQTSDTRTELKVASLE 180
           QKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLLAEHVQTSDTRTELKVASLE
Sbjct: 121 QKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLLAEHVQTSDTRTELKVASLE 180

Query: 181 KPMLRRGHQDLQSSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR 240
           KPMLRRGHQDLQSSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR
Sbjct: 181 KPMLRRGHQDLQSSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR 240

Query: 241 KAAAAERQRTICK 254
           KAAAAERQRTICK
Sbjct: 241 KAAAAERQRTICK 253

[Close]

BLAST of Carg28119 vs. NCBI nr
Match: KAG6571370.1 (Golgin candidate 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-23
Identity = 122/307 (39.74%), Postives = 149/307 (48.53%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 438 EIESLREEYHQRVSTLEKK-VYALTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 497

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 498 ELSKKQAAQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 557

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE + L
Sbjct: 558 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAL 617

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 618 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 677

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 678 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 708

[Close]

BLAST of Carg28119 vs. NCBI nr
Match: XP_022928026.1 (golgin candidate 5-like [Cucurbita moschata])

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-23
Identity = 122/307 (39.74%), Postives = 149/307 (48.53%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 435 EIESLREEYHQRVSTLEKK-VYALTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 494

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 495 ELSKKQASQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 554

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE + L
Sbjct: 555 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAL 614

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 615 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 674

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 675 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 705

[Close]

BLAST of Carg28119 vs. NCBI nr
Match: XP_023512322.1 (golgin candidate 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-23
Identity = 122/307 (39.74%), Postives = 149/307 (48.53%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 437 EIESLREEYHQRVSTLEKK-VYSLTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 496

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 497 ELSKKQASQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 556

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE + L
Sbjct: 557 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAL 616

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 617 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 676

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 677 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 707

[Close]

BLAST of Carg28119 vs. NCBI nr
Match: XP_022971745.1 (golgin candidate 5-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 7.7e-23
Identity = 121/307 (39.41%), Postives = 148/307 (48.21%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 430 EIESLREEYHQRVSTLEKK-VYALTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 489

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 490 ELSKKQAAQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 549

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE +  
Sbjct: 550 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAQ 609

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 610 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 669

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 670 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 700

[Close]

BLAST of Carg28119 vs. ExPASy Swiss-Prot
Match: Q0WVL7 (Golgin candidate 5 OS=Arabidopsis thaliana OX=3702 GN=GC5 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 107/311 (34.41%), Postives = 143/311 (45.98%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           E+ESLREEY +      +R +  L + R  LRR ++++SD AALLKEKDEII +VMA+  
Sbjct: 395 EVESLREEYHQRVATL-ERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGE 454

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQ                         
Sbjct: 455 ELSKKQAAQEAQIRKLRAQIREAEEEKKGLITKLQ------------------------- 514

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKV++ +  + KTATE   ++  +  Q   +S K   Y   L  AKE + L
Sbjct: 515 ------SEENKVESIK--RDKTATEKLLQETIEKHQAELTSQKDY-YSNALAAAKEAQAL 574

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    ++ R+EL+             V +LE                + M R   +DLQ
Sbjct: 575 AEERTNNEARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEIEDLQ 634

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQET---TAKKGRSVGK---------QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQET   TA+   +V +         + +
Sbjct: 635 RRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETSYRTAEAWAAVERTLNSRLQEAESK 669

[Close]

BLAST of Carg28119 vs. ExPASy TrEMBL
Match: A0A6J1EJ47 (golgin candidate 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434935 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.5e-24
Identity = 122/307 (39.74%), Postives = 149/307 (48.53%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 435 EIESLREEYHQRVSTLEKK-VYALTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 494

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 495 ELSKKQASQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 554

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE + L
Sbjct: 555 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAL 614

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 615 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 674

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 675 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 705

[Close]

BLAST of Carg28119 vs. ExPASy TrEMBL
Match: A0A6J1I6L0 (golgin candidate 5-like OS=Cucurbita maxima OX=3661 GN=LOC111470412 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-23
Identity = 121/307 (39.41%), Postives = 148/307 (48.21%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +      K+ +  L + R  LRR +SRRSDVAALLKEKDEII +VMA+  
Sbjct: 430 EIESLREEYHQRVSTLEKK-VYALTKERDTLRREQSRRSDVAALLKEKDEIINQVMAEGE 489

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 490 ELSKKQAAQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 549

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LTVAKE +  
Sbjct: 550 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTVAKEAEAQ 609

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ RTEL+             V +LE                + MLRR  +DLQ
Sbjct: 610 AEARANSEARTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 669

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKGRSVGKQKR-----------K 249
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++  + G  +R           K
Sbjct: 670 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWGAVERSLNSRLQEAEAK 700

[Close]

BLAST of Carg28119 vs. ExPASy TrEMBL
Match: A0A0A0LQ56 (TMF_TATA_bd domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G299360 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 119/311 (38.26%), Postives = 152/311 (48.87%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +   +  K+ +  L + R  LRR ++R+SDVAALLKEKDEII +VMA+  
Sbjct: 450 EIESLREEYHQRVSVLEKK-VYALTKERDSLRREQNRKSDVAALLKEKDEIINQVMAEGE 509

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQV                        
Sbjct: 510 ELSKKQASQESQIRKLRAQIRELEEEKKGLITKLQV------------------------ 569

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LT AKE + L
Sbjct: 570 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTAAKEAEAL 629

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ +TEL+             V +LE                + MLRR  +DLQ
Sbjct: 630 AEARANSEAKTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 689

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKG-------RSVGK-----QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++        RS+       + +
Sbjct: 690 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWAAVERSLNSRLQEAEAK 724

[Close]

BLAST of Carg28119 vs. ExPASy TrEMBL
Match: A0A5D3BVJ8 (Golgin candidate 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00970 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.1e-22
Identity = 118/311 (37.94%), Postives = 152/311 (48.87%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +   +  K+ +  L + R  LRR ++R+SDVAALLKEKDEII +VMA+  
Sbjct: 566 EIESLREEYHQRVSVLEKK-VYALTKERDSLRREQNRKSDVAALLKEKDEIINQVMAEGE 625

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKG+I KLQV                        
Sbjct: 626 ELSKKQAAQESQIRKLRAQIRELEEEKKGVITKLQV------------------------ 685

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LT AKE + L
Sbjct: 686 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTAAKEAEAL 745

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ +TEL+             V +LE                + MLRR  +DLQ
Sbjct: 746 AEARANSEAKTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 805

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKG-------RSVGK-----QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++        RS+       + +
Sbjct: 806 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWAAVERSLNSRLQEAEAK 840

[Close]

BLAST of Carg28119 vs. ExPASy TrEMBL
Match: A0A1S3CE12 (golgin candidate 5 OS=Cucumis melo OX=3656 GN=LOC103499665 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.1e-22
Identity = 118/311 (37.94%), Postives = 152/311 (48.87%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           EIESLREEY +   +  K+ +  L + R  LRR ++R+SDVAALLKEKDEII +VMA+  
Sbjct: 451 EIESLREEYHQRVSVLEKK-VYALTKERDSLRREQNRKSDVAALLKEKDEIINQVMAEGE 510

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKG+I KLQV                        
Sbjct: 511 ELSKKQAAQESQIRKLRAQIRELEEEKKGVITKLQV------------------------ 570

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKVD+ +  + KTATE   ++  +  QT  ++ K   Y   LT AKE + L
Sbjct: 571 -------EENKVDSIK--RDKTATEKLLQETIEKHQTELAAQKEY-YTTALTAAKEAEAL 630

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    S+ +TEL+             V +LE                + MLRR  +DLQ
Sbjct: 631 AEARANSEAKTELESRLREAEERETMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQ 690

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQETTAKKG-------RSVGK-----QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQETTA++        RS+       + +
Sbjct: 691 KRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETTARRAEAWAAVERSLNSRLQEAEAK 725

[Close]

BLAST of Carg28119 vs. TAIR 10
Match: AT1G79830.1 (golgin candidate 5 )

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 107/311 (34.41%), Postives = 143/311 (45.98%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           E+ESLREEY +      +R +  L + R  LRR ++++SD AALLKEKDEII +VMA+  
Sbjct: 395 EVESLREEYHQRVATL-ERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGE 454

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQ                         
Sbjct: 455 ELSKKQAAQEAQIRKLRAQIREAEEEKKGLITKLQ------------------------- 514

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKV++ +  + KTATE   ++  +  Q   +S K   Y   L  AKE + L
Sbjct: 515 ------SEENKVESIK--RDKTATEKLLQETIEKHQAELTSQKDY-YSNALAAAKEAQAL 574

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    ++ R+EL+             V +LE                + M R   +DLQ
Sbjct: 575 AEERTNNEARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEIEDLQ 634

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQET---TAKKGRSVGK---------QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQET   TA+   +V +         + +
Sbjct: 635 RRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETSYRTAEAWAAVERTLNSRLQEAESK 669

[Close]

BLAST of Carg28119 vs. TAIR 10
Match: AT1G79830.2 (golgin candidate 5 )

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 107/311 (34.41%), Postives = 143/311 (45.98%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           E+ESLREEY +      +R +  L + R  LRR ++++SD AALLKEKDEII +VMA+  
Sbjct: 395 EVESLREEYHQRVATL-ERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGE 454

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQ                         
Sbjct: 455 ELSKKQAAQEAQIRKLRAQIREAEEEKKGLITKLQ------------------------- 514

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKV++ +  + KTATE   ++  +  Q   +S K   Y   L  AKE + L
Sbjct: 515 ------SEENKVESIK--RDKTATEKLLQETIEKHQAELTSQKDY-YSNALAAAKEAQAL 574

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    ++ R+EL+             V +LE                + M R   +DLQ
Sbjct: 575 AEERTNNEARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEIEDLQ 634

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQET---TAKKGRSVGK---------QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQET   TA+   +V +         + +
Sbjct: 635 RRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETSYRTAEAWAAVERTLNSRLQEAESK 669

[Close]

BLAST of Carg28119 vs. TAIR 10
Match: AT1G79830.3 (golgin candidate 5 )

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 107/311 (34.41%), Postives = 143/311 (45.98%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           E+ESLREEY +      +R +  L + R  LRR ++++SD AALLKEKDEII +VMA+  
Sbjct: 395 EVESLREEYHQRVATL-ERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGE 454

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQ                         
Sbjct: 455 ELSKKQAAQEAQIRKLRAQIREAEEEKKGLITKLQ------------------------- 514

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKV++ +  + KTATE   ++  +  Q   +S K   Y   L  AKE + L
Sbjct: 515 ------SEENKVESIK--RDKTATEKLLQETIEKHQAELTSQKDY-YSNALAAAKEAQAL 574

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    ++ R+EL+             V +LE                + M R   +DLQ
Sbjct: 575 AEERTNNEARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEIEDLQ 634

Query: 243 SSYSYASERRCEELITQGPRVYKATLRQIEAMQET---TAKKGRSVGK---------QKR 252
             Y  ASERRCEELITQ P   +  LRQIEAMQET   TA+   +V +         + +
Sbjct: 635 RRYQ-ASERRCEELITQVPESTRPLLRQIEAMQETSYRTAEAWAAVERTLNSRLQEAESK 669

[Close]

BLAST of Carg28119 vs. TAIR 10
Match: AT1G79830.4 (golgin candidate 5 )

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-17
Identity = 107/330 (32.42%), Postives = 143/330 (43.33%), Query Frame = 0


Query: 3   EIESLREEYIRESQLFGKRGILLLLRRRIHLRRSKSRRSDVAALLKEKDEIIIKVMAKD- 62
           E+ESLREEY +      +R +  L + R  LRR ++++SD AALLKEKDEII +VMA+  
Sbjct: 395 EVESLREEYHQRVATL-ERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGE 454

Query: 63  --------------------REPEEEKKGLIPKLQVIDLSSECMVCVAPIICKDFIFLCI 122
                               RE EEEKKGLI KLQ                         
Sbjct: 455 ELSKKQAAQEAQIRKLRAQIREAEEEKKGLITKLQ------------------------- 514

Query: 123 STLIFTGEENKVDASRGTKQKTATENCCKKHRKATQTRTSSTKRVRYQLPLTVAKEPKLL 182
                  EENKV++ +  + KTATE   ++  +  Q   +S K   Y   L  AKE + L
Sbjct: 515 ------SEENKVESIK--RDKTATEKLLQETIEKHQAELTSQKDY-YSNALAAAKEAQAL 574

Query: 183 AEHVQTSDTRTELK-------------VASLE----------------KPMLRRGHQDLQ 242
           AE    ++ R+EL+             V +LE                + M R   +DLQ
Sbjct: 575 AEERTNNEARSELENRLKEAGERESMLVQALEELRQTLSKKEQQAVYREDMFRGEIEDLQ 634

Query: 243 SSYS-------------------YASERRCEELITQGPRVYKATLRQIEAMQET---TAK 252
             Y                     ASERRCEELITQ P   +  LRQIEAMQET   TA+
Sbjct: 635 RRYQVKSRCFVVSMHISFFGYRLLASERRCEELITQVPESTRPLLRQIEAMQETSYRTAE 689

The following BLAST results are available for this feature:

BLAST of Carg28119 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011140.1	1.8e-128	100.00	Golgin candidate 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571370.1	1.5e-23	39.74	Golgin candidate 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928026.1	1.5e-23	39.74	golgin candidate 5-like [Cucurbita moschata]	[more]
XP_023512322.1	2.0e-23	39.74	golgin candidate 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022971745.1	7.7e-23	39.41	golgin candidate 5-like [Cucurbita maxima]	[more]

BLAST of Carg28119 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WVL7	2.7e-18	34.41	Golgin candidate 5 OS=Arabidopsis thaliana OX=3702 GN=GC5 PE=1 SV=1	[more]

BLAST of Carg28119 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ47	7.5e-24	39.74	golgin candidate 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434935 PE=4 SV=1	[more]
A0A6J1I6L0	3.7e-23	39.41	golgin candidate 5-like OS=Cucurbita maxima OX=3661 GN=LOC111470412 PE=4 SV=1	[more]
A0A0A0LQ56	1.4e-22	38.26	TMF_TATA_bd domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G299360...	[more]
A0A5D3BVJ8	3.1e-22	37.94	Golgin candidate 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G0...	[more]
A0A1S3CE12	3.1e-22	37.94	golgin candidate 5 OS=Cucumis melo OX=3656 GN=LOC103499665 PE=4 SV=1	[more]

BLAST of Carg28119 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79830.1	1.9e-19	34.41	golgin candidate 5	[more]
AT1G79830.2	1.9e-19	34.41	golgin candidate 5	[more]
AT1G79830.3	1.9e-19	34.41	golgin candidate 5	[more]
AT1G79830.4	3.0e-17	32.42	golgin candidate 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..253
None	No IPR available	PANTHER	PTHR47347	GOLGIN CANDIDATE 5	coord: 3..77 coord: 171..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28119-RA	Carg28119-RA	mRNA