Carg28096 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28096
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	vacuolar protein sorting-associated protein 20 homolog 2-like
Location	Carg_Chr03: 1546466 .. 1554060 (-)
RNA-Seq Expression	Carg28096
Synteny	Carg28096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTTGTTCGTCAAGAAGCCTAAAGTCACCGATGTTGATAAAGCGATTCTTTCTCTCAAGACGCAGAGACGCAAACTAGGTCAATATCAACAGCAGGTTTTCAATTCATCCCCTACTCTTAATTTACTCCTGCAGTTGGATTCTTTAAATTGCGTATGAATGAAACTGGATTGGAAAGAACTGAATATGTTTCTGGAATTGCAAGCCGTGGTAAAATGTGTGTTGTTTGTGTGGCTGTTAGAGCATAACTTTAGCATTAGTAGGTAGAATAAATTGGTTTATAAGACCCTTTTCGTGTTTACTCTCAGCCCCATAGTTTGTTCTCTCCAATGGAATGATATTGTCCACTTTGAGCATAAGCTCTCATTGCTTTGCTTTGGGCTACCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTTACTTACAAACCCATGAAGGATTTCCCCGTTTGCTTGTATGTTCAAGTTCTGCAGTTTGAAAACGCCTCTGGGAAAATTATGGAGAATGTTCTACCTTTATATGATGTAATTAGCTTATATTACAAAGGTATTTTGCAGTTACTATCTAATTCTTGGAATTCCATGAAGCTCTAAGATTTATTACTGATGGTGTGTTTTCTAGTTCGAGAAGTTTTGCGCTAAAAGAACTTGATAAATGTTATATTTTCTTTGATTGTGACAAAAAGTTAACCCATTCATTGTTGGTTAATGCATGTATGTGCTGGAGTAGTTCAGATGTCAGACCTACGCTTGGGTCTCTGTTACCAAAAATTCTTGGGATTGTCCTTTCTTCCTCCTTTTGAACTGGAACTTCCTTTTTCTCTCTCTCTTTTTTTTTTCCAAAAAAAAATACTGGCTTATATATATATATATATATATATATATATCAATCCTGTATCTTACTTGGGGTAAATGCTATCCCCCTTTCATAAACTGCAACCTTGATGATCTTGTTAATTGGAGAGCTTTTTATGTAACTCTATCTGATAGGATTTCTGGTATTGGTATTCCCTTTTGCAATATTCAATATCATCAATAAGATATTTACTTTTCCTATCAAGTAATTTAATAAAATATTTGTTTCCTATATCAACAGATAAATAATAGAATTAGAAGATGAGAAGAAAGAACAAAGGAGATCAAACATGACTTTGAGAAGGCGTATGAGAGACTCTTTGATAGTGACAAGATTGATGTTTCTTACTTGCAGTTTTGGATACACTGTGTTTTGTAAGGATAGATAATGCTATAAAGACTGTTGAATTTATCTCAGACCTGAAGAATAATTAGGCAAAATCAGCAATAATAACATTAGTTTAGAAGATTTAAAATTGGAGGATTCGACTTTTTCAATCGAGTTGCACAGTTAAAGAACTACTTGTGCTTTTTCTGCAGTTGCCACTAGAAGGTAATTGAAGATGACCTTTGATATATGTTCTTTGTATGAAGACTAGTGTAGACGAAGATCATGTTTTCTTCCATTGCCCTATAAATGCTCCAAGAAATAGTACTATTCAACTTCTTTGTTATGTTGAGCTCAAAAGCAAAGCCAAGCTGATTTGGGTAAGGTGTAGTTAAAGCAATTATCTCATAAATTTTGTTTGAAGTGTCATTTTCTGTTTCTCTTATCCTTCAATTCCTTAAAAATGTTTCCTTTCATTGAAGTTTGAAACTAAAGAACCAGCAAGTAGCAACTGAAGATAGGGCAGTTTTTCAAAAGTTTGATTCATTTCATCAATTGTTTCCTCTGATAGCTTTTTACTTCTTTTCCTCTCTTTGAACGTTTCTCTTTTGCTCTCAGTTCAGCATCCTCATTACCTTATATCACAACACAAAAACACCTTGTTTTCTTTTGTTTGTAGCTAATACTCCAATTTCTGAACTGTTTGAACTAATAAATGTTTTGATTGATCTGGCACTACTACCTTGTATGCATCTTGTGTTTTGAAAAAAGTAAACAAATGTAAGTCTCATTAGTATTAATGCATTTGTTATGAAATTCTTTCTAGAAAACCATGGAACTTTAATGATATCTCATAAAGTAATGCATTCTTTTTTTTTTTAAAAAAAAAAAAAAAGCTTGAGACCTTGAAGATATCCCCTTTCATGATGTTCCAACGTCTTAGTCTATGTAAAGAATTCTCCTAAAAGTCCATCTCTCAAAATATTTATGATTTTCCATATTTCAGAATGGTGCCATAAACTCATCTTTAATGATCTAAATTTAATTTATTCAATATGACATATTGATGAATTATTAGTATTTTCTTCTTGAGTTCAACATGGGGGTGGGGGATTCAAATCGGTGAAGTATGTGTATTAATTCACCAATATTTTAAATAACTTTTTAAGTCATCTATGAATCATGGAATTGAATTATGCCTGACCAAAATTATCATAAACTCATAAAGTAAAGTTGCTTTTACCCTGGGCATAAAACCCAGAACCAATAAATAACTTCTGGTTGGGTTTCTTTCATAGGAATGCAAGTGTATTTTACTTTGAAAATTGAATAATTATTTTTTACTTTTCGTGACCTTTTCTTCCCTAGCTTGATGCTGTCATTGAAGCAGAAAAGAACGCTGCAAGAGAGTTAGTTCGACAAAAGAAAAAGGATAGGGCCTTGTTAGCTTTGAAGAAGAAAAAGGCACAAGAAGAATTGTTAAAGCAAGTTGATGCCTGGCTGATTAATGTTGAGCAACAAGTGAGTTCTGTTAATTTTTCCCTTGTCTATTCAAATCTCGTTGTCTTCTCCCTTTTAACTTGAAATTTATACTTTTTTGTTTCTCTTAAAAGTAATGGTTGCATTAGATCTTAAAATCAAGATTTTGGTGGTTGCAATAGTAAGGTTTGGTTTTTTAGTTCCACGTTCAGAATTAAATCGTCTTCTTCACAAAACTTTTTGTACTCTAGAAATTTATGTTCGTGCTTTAATATTGTTGTTGGCTCAGTTGTCAGATATTGAATTGGCCAGCAAACAGAAAGCTGTTTTTGAAAGTTTGAAGGCTGGCAATAATGCTATCAAAGCTATACAAAGTGAAATTAATATAGATGATGTCCAAAAGCTGATGGATGATACCGCTGAAGCTAAGGCATATCAAGATGTAAGTTCGTAAGTTTTTTTTTAAATTGATTGTTTTATTAGGATCATATTTGAAATTTTTATTCTATTACCTGGTTTACAAGTTAGATTATGGTTACAAGTTATGTCTTAATTTTGATGGAATTAAATATTCTTGTATTCCAATAATCTAATTATCAAATAGTAAGATTGATAACCCTCTTATATGGGAGAAAGAGCCCACACGAGACAAAAAAGAAGAATAGACGTGAGATCCCACATTGATTGGAGAGAGGAACGAGTGCCAGCGAGGACACCGGCCCCAAAGGGGGGTCGATCGCCACATGGAGGACAAAAAAGGTGAAGCCACATGGTAGTGGGTGAGAGAACAAACACACCATTTAAAAGGTCGTGTGTGAAACCTTCCCCTAGCAAGAATAGAACTGATAAGGGAAAGTGAGGACAATATCTGCCCACAGTGATCTGGGTCGTTACAAATTGGTATCAGAGTCTAGGTACCGGACTATGTCCCAGTATTTCTCGTTGTTCCCCGAAGGTAGACAACGAAGGCGGATGTGCCAGTAAGGACACTGGCCCCAATAAAGGGGGGTGGATTTGGGGTGATGGAATTCCCACATCGATTGAGAGGAAAAAGTGAGTACGCAGCAAGGACGCTGGGCCCCGAAGGGGAGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACACATTTTAAAGCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAGAAACATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCAGTTGCATTTTAAAACCTTGAGGGGAAGCTCGGAAAGGAAAGCCTAAAGAGGACAATATCCGCTAGCGGTGGGCTTGGATGGTTAGAATAGAATAAAACCATTACTGGATACACCTAATTAAAATATTACTATTAGTATAGCCAATGGTGCATTAGTAAGAAAGTAACTTAACACAATAATTGTTAATTGCTTGCGGAAGATAGACAAACAGATACAATCCCAACAAAATCTGTCTCCAAGATGGTAATGGCGCCACCACCCTCTTTTGGATGGACGCATGGATCACTACTTTGATATTGGCCTCTCGTTACCCTCTATTATATAGTCTTTCTCGTTGCAAGGACCGGAAATTCTTTTTGAGATTTAAAGCTTGGCCGTAACTTAAAGGACTAGGAGACTATTGAATGGGCAGATCTTATCCTTGACCTTGATTGATTTTACTCTCACAATAACAATCAAGGCTATATAAAGTCGTATGTTATATTTGTAAAAGAGACTTAGAGAAGGTAGTAAAAAGAGCCTTTGTGCTTTTTTTTAGCCAATAACTAAGCTTCTTTGTAATTCTATATAGTTTAGGTTGTATGTTTAGAATCGTTCAAGTTTAACATGATCGATCTTGCATGTGGAGTGATTCAAATCTCAATCAAGTGTTCTTGCCTTGAGATATTTGATCAACAAGGTAATCCAAATTTTACTTTCCCTTGGAGTGATTCCTTATCATTAGGACTAAGTGTTCTTACCTTTCCTTTAGCTAAGGGTTAAGTTTCTTTGCAATTTTATGTAGTTTAGGTTGCATGTTTAGAATCATTCAAACTTTACATGATCAATTTTGCTTGTGAAACGATTCGAATCTCAAACTAGTGTTCTTGTCTTGAGATATTCGATCAACTCCCTTGTAGTGATTCCTTCTCGCTAACAATCTCTCATTTGACCATTTCAATGTTCTCATCACTTAACCTTTATCACAATATGGGGATCTTCTTCTTCCTTAGCTTTTGGTGACAAAATTGCATAATTTTGTGGATCTTTTCTATTTTATTATGCATATATGTTTTATTTTTAGATAAAAGTCTTGCACCCGCTTTGAGGCCCAGACTTAGGAGACATGAAGAAGTTTTCTTATTAAGTTCACTCGAAGATTCGAACATGCAATATCTAGGTAGGTGTTACTTAGAGACTGCTGGCCTTGGGTAATGGGTTGCCTTTATATTGAATCCTCAAGTCAGCATGCTCCTTGGTTTGACCAATTTCTTGATGCAAACTCCTTGATAAACTATCCAGCCTTGCCATTTCAGAAACCCAACACAGAATATGCCCCTATGGTACTCAAGTAATTTGTCAAACAGATACAATCCAAGCACTCTGAAAGCTTGATACTCTCTCCAAATCCAAGCACTTTACCTTATCACTATTCCTCGAACTCAGAATCACATTTTCACCTACTAATTGTCTGTTCTTTTTCTAAATATTATGGTTCTGGAAGTATTTGGGTGGTCTTTGGTCATGCCAAGTGATATCCCTGATTTCCTTACCTCAATCCTTGTGGGGCATCCTTTCAAATGAACTAAGAAACTTATTTGTTGTGCCTTGAATAGAGCTTTTTTGTGGATCTTATGGCGAAAACGAATACTTGGGTTTTCATTGGGTTACAGTCCAACTATTCTTTTTAGTGCTTTTGATTGGTGTAAATGTTCACTACAACGTAATCATTATACTCTTACTACTCTCGTCTGTACTTGGAAATCATTTTTTAACCACTAAGGGTAATTTTTTCTTGATCCTTGGTAATTTGATTCATTAATAAAATAAGATTCTGTTTCTCCTAAAAGAAGAAGAAAAAGAAGAAGAAAAAAAAGAAAAAAAAGAAAAAAAAGAACGCTTTCCAAACTATTCTCCAAAATATTTCTTACTCTCAATGCTCCTTCTCAACTCACCTTATAATCGATTAACATGTCCTAGAAACATATCCAACTTGCTATCATCAATCGTCCTTTGGGGTGTACATTAAACTCGAGAACCCAAGAACTCGAACTGACCCAACTTGAATTATAAGAGTTGGGTTGTGTTAGATAGCATTTTCGGGTTGGGTTGGGTTGTGTTACTAGGACTTGATTCGGTTCGGGTTCAGTGGACAAAGAACTGGATCAACCCGACCTCCCCCTCTCTCTACATACCCCTTTTCTTATTGCAGAAATAACAAATTAATTAATTAATTATTATTATTATTTTTTAAATATTGAACAACCTGACAATCCAATCCAATCCAACCCAACCCAAAAATAGAGGTTTGGGTAGGGTTAGGTTTTGAAACAAGTTCGGGTTGGGTTGGGTTACCAATCTAACCAACCTAAACTTTTGGGTTGGTCCAAAAATATTTCTCAAACCGAACGGACTCAACCCAACCCATATACAACCCTAAGTGTCCTCACTGACCAAGAGAACACATGGGTTTGGAACATTGATAAAGAGGGTGTTTTCACCTTTGCTACAGCTTTTTGGAATTTGGAATTTGATCATTGCTGCTTTTGGTTGTTAGAACAAGGCTCCAACTCTTTTATTGATTCTACTATTTATTTAGCTCTTTATTGGTGTGAATTGTCTCTATTAGGGTCCCGTACTCTCACATGTCCAAATTTAGTTTCATACTTTCAGTAAATCTTAAAAGTTAGGACGTGGTTGTGCACTGTAACTGAATTAGATTTTTGGGATCATTCTATTCCTCTACTTCTTTTATTTAATATCTGTGCTCCAATATCATTATGTATCCTTTTTCTTGTGCCTAAATTTTATTTATATTTTTGAAGGAAATTAATGCCATCTTAGGAGAGAAATTATCAGAAGAAGATGAGGAGCAAATCTTAGCAGAGTTTGAAGGCTTGGAAGCTCAGGTACCATATGTTTTGTTGTCTTATTCATTATTATTTTTCATCCCGCATCATAGGGTCGGTCCATTCAGTCATTTAATTGAACAGAGAAACCAGAATAAGTTATAAACTCATAACATTAATAGCTACGGCTGCTCCCATTCGTCTTTTACTATACTATCTCAAGGCGATCCCCGATCAACCTTTTTCTCAGCTCACTGTTGAAGATCTGCCTGAGGTCCCAACATCCGAAGAAAATGCTGAAAAGTTGGATCTTCCCAACGTACCAACCAAAAAACCTGTTGCAGCTGATGCCATTGAAGAAGATGCTGTAATTGTTTCATCTGATGCCTCCACAAAGAGAAGAGGTCTCTTTTTCTCTCTTTCTCTCTCTCAAACAAAAAGAAAAGAAAAAAAAAAAAAGTTACCCTTTTAAATCCACTGGTTTCATAACACATTAAATTTGTTGAATGCAGTTATGGAAGAACCATTGCCAGCATAAGTGTTTGGTATATACTTGATCGAGGTTGGTGAAGTGGTTTGAGCTGAGACTCTGTTATTTGCTTTTGTTATTTATTATGTCTCATTCACCAATATGATGTTGTACAGACACTTCCTTATGCACATGTATAAATTTATTTTCTCTGTTTAGGGGTGTGTTTTATATATGAAGTGTTTCATTTTGTATGAAAGAAAATTAAATAATAGTTTTTTTTTTTTAATAGTGATTTTTTACTATTTGGTAGGTAAATTTTCAAAAGGTATGA

mRNA sequence

ATGGGGAATTTGTTCGTCAAGAAGCCTAAAGTCACCGATGTTGATAAAGCGATTCTTTCTCTCAAGACGCAGAGACGCAAACTAGGTCAATATCAACAGCAGCTTGATGCTGTCATTGAAGCAGAAAAGAACGCTGCAAGAGAGTTAGTTCGACAAAAGAAAAAGGATAGGGCCTTGTTAGCTTTGAAGAAGAAAAAGGCACAAGAAGAATTGTTAAAGCAAGTTGATGCCTGGCTGATTAATGTTGAGCAACAATTGTCAGATATTGAATTGGCCAGCAAACAGAAAGCTGTTTTTGAAAGTTTGAAGGCTGGCAATAATGCTATCAAAGCTATACAAAGTGAAATTAATATAGATGATGTCCAAAAGCTGATGGATGATACCGCTGAAGCTAAGGCATATCAAGATGAAATTAATGCCATCTTAGGAGAGAAATTATCAGAAGAAGATGAGGAGCAAATCTTAGCAGAGTTTGAAGGCTTGGAAGCTCAGCTCACTGTTGAAGATCTGCCTGAGGTCCCAACATCCGAAGAAAATGCTGAAAAGTTGGATCTTCCCAACGTAAATTTTCAAAAGGTATGA

Coding sequence (CDS)

ATGGGGAATTTGTTCGTCAAGAAGCCTAAAGTCACCGATGTTGATAAAGCGATTCTTTCTCTCAAGACGCAGAGACGCAAACTAGGTCAATATCAACAGCAGCTTGATGCTGTCATTGAAGCAGAAAAGAACGCTGCAAGAGAGTTAGTTCGACAAAAGAAAAAGGATAGGGCCTTGTTAGCTTTGAAGAAGAAAAAGGCACAAGAAGAATTGTTAAAGCAAGTTGATGCCTGGCTGATTAATGTTGAGCAACAATTGTCAGATATTGAATTGGCCAGCAAACAGAAAGCTGTTTTTGAAAGTTTGAAGGCTGGCAATAATGCTATCAAAGCTATACAAAGTGAAATTAATATAGATGATGTCCAAAAGCTGATGGATGATACCGCTGAAGCTAAGGCATATCAAGATGAAATTAATGCCATCTTAGGAGAGAAATTATCAGAAGAAGATGAGGAGCAAATCTTAGCAGAGTTTGAAGGCTTGGAAGCTCAGCTCACTGTTGAAGATCTGCCTGAGGTCCCAACATCCGAAGAAAATGCTGAAAAGTTGGATCTTCCCAACGTAAATTTTCAAAAGGTATGA

Protein sequence

MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALLALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENAEKLDLPNVNFQKV

Homology

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BLAST of Carg28096 vs. NCBI nr
Match: KAG7033577.1 (Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPNVNFQKV 194
           EKLDLPNVNFQKV
Sbjct: 181 EKLDLPNVNFQKV 193

[Close]

BLAST of Carg28096 vs. NCBI nr
Match: XP_022928588.1 (vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 2.8e-89
Identity = 188/192 (97.92%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDE+NAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA
Sbjct: 121 VQKLMDDTAEAKAYQDEMNAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. NCBI nr
Match: KAG6603293.1 (Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.6 bits (867), Expect = 3.6e-89
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLK GNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKTGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. NCBI nr
Match: XP_023520722.1 (vacuolar protein sorting-associated protein 20 homolog 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.8 bits (865), Expect = 6.1e-89
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFE LEAQLTVEDLPEVPTSEENA
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. NCBI nr
Match: XP_022967900.1 (vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQK VFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKDVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEF GLEAQLT+EDLPEVPTS+ENA
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFGGLEAQLTIEDLPEVPTSDENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. ExPASy Swiss-Prot
Match: Q9FY89 (Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS20.2 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.6e-76
Identity = 155/191 (81.15%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPK+T+VD+AILSLKTQRRKLGQYQQQL+ VIEAEK AAR+L+R+K+KDRALL
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVD WLINVEQQL+DIEL SKQKAVFESLK GNNAIKAIQSE+N+DD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSE--- 180
           VQKLMDDTAEAKAYQDE++AILGEKLS EDEE+ILAEF+ LE+ L VED+PEVPT+E   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 181 ENAEKLDLPNV 189
           E  EK+DLP+V
Sbjct: 181 EEPEKMDLPDV 191

[Close]

BLAST of Carg28096 vs. ExPASy Swiss-Prot
Match: Q8GXN6 (Vacuolar protein sorting-associated protein 20 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS20.1 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.6e-74
Identity = 149/189 (78.84%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+K+KDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KK+ QEELLKQVD W+INVEQQL+DIEL SKQKAVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSE-EN 180
           VQKLMDDTA+AKAYQDE+NAILGEKLS EDEE ILAEF+ LE+QL V+++PEVPT E E 
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 AEKLDLPNV 189
           +EKLDLP+V
Sbjct: 181 SEKLDLPDV 189

[Close]

BLAST of Carg28096 vs. ExPASy Swiss-Prot
Match: Q503V0 (Charged multivesicular body protein 6 OS=Danio rerio OX=7955 GN=chmp6 PE=2 SV=3)

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-30
Identity = 82/192 (42.71%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRA 60
           MGNLF KK   +VT+ D+A+L LK QR KL QYQ+++   ++ E+  A++L++  KKD+A
Sbjct: 1   MGNLFGKKKATRVTEQDRAVLQLKQQRDKLKQYQKRITLQMDKERQLAKQLLKDGKKDKA 60

Query: 61  LLALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI 120
           LL LKKK+ Q++LL++ +  + N+E+ + DIE A  +  V E LK GN+ +K +   ++I
Sbjct: 61  LLLLKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGL---EAQLTV-----EDL 180
           ++V+K+MD+T +A  YQ +I+ +L   L++EDEE +LAE E +   EA L +     E+L
Sbjct: 121 EEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITQGEADLELPEVPGEEL 180

Query: 181 PEVPTSEENAEK 183
           PEVP  E   EK
Sbjct: 181 PEVPEQEPVREK 192

[Close]

BLAST of Carg28096 vs. ExPASy Swiss-Prot
Match: Q5ZL55 (Charged multivesicular body protein 6 OS=Gallus gallus OX=9031 GN=CHMP6 PE=2 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-28
Identity = 76/190 (40.00%), Postives = 121/190 (63.68%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRA 60
           MGNLF +K   +VT+ DKA+L LK QR KL QYQ+++   +E E+  AR+L+++ KK++A
Sbjct: 1   MGNLFGRKRRSRVTEQDKAVLQLKQQRDKLRQYQKRISLGLERERELARQLLKEGKKEKA 60

Query: 61  LLALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI 120
           +L LKKK+ QE+LL + D  + N+E+ + DIE    +  V E LK GN  +  +   ++I
Sbjct: 61  MLLLKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGL-EAQLTVEDLPEVPTSE 180
           ++V++++ +T +A  YQ +I+ IL   L+EEDE+ IL E   + + QL + D+P  P  E
Sbjct: 121 EEVERIIGETQDAVEYQRQIDEILAGSLTEEDEDAILEELNAITQEQLELPDVPSEPLPE 180

Query: 181 ENAEKLDLPN 188
           E  E   + N
Sbjct: 181 EPPEATPVKN 190

[Close]

BLAST of Carg28096 vs. ExPASy Swiss-Prot
Match: Q6NU11 (Charged multivesicular body protein 6-B OS=Xenopus laevis OX=8355 GN=chmp6-b PE=2 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 4.1e-27
Identity = 76/190 (40.00%), Postives = 120/190 (63.16%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRA 60
           MGNLF +K   +VT+ DKA+L LK QR KL QYQ+++   ++ E+  A++L+   KK++A
Sbjct: 1   MGNLFARKRRSRVTEQDKAVLQLKQQRDKLKQYQKKITLQLQRERELAKQLLHDGKKEKA 60

Query: 61  LLALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI 120
            L LKKK+ QE+LL++ D  + N+E+ + DIE A  +  V E LK GN  +K +   ++I
Sbjct: 61  KLLLKKKRYQEQLLEKTDNQISNLEKMVDDIEFAQIEMKVIEGLKVGNEWLKKMHEVMSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGL-EAQLTVEDLPEVPTSE 180
           ++V+K+M++T E   YQ +I+ +L   L+ EDEE IL E E + +  L + + P  P S+
Sbjct: 121 EEVEKIMEETQEGIEYQRQIDEMLSGSLTAEDEEAILEELEAITQEDLELPEAPSEPLSD 180

Query: 181 ENAEKLDLPN 188
              EK  + N
Sbjct: 181 TVPEKQAVKN 190

[Close]

BLAST of Carg28096 vs. ExPASy TrEMBL
Match: A0A6J1EPH4 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435445 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 188/192 (97.92%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDE+NAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA
Sbjct: 121 VQKLMDDTAEAKAYQDEMNAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. ExPASy TrEMBL
Match: A0A6J1HVP8 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111467276 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.6e-88
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQK VFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKDVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEF GLEAQLT+EDLPEVPTS+ENA
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFGGLEAQLTIEDLPEVPTSDENA 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLPNV  +K
Sbjct: 181 EKLDLPNVPTKK 192

[Close]

BLAST of Carg28096 vs. ExPASy TrEMBL
Match: A0A1S3B5R7 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103486109 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 184/192 (95.83%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLK VDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKHVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFE LEAQLTVEDLPEVPTSEE  
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEVPTSEEKE 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLP V  +K
Sbjct: 181 EKLDLPEVPSKK 192

[Close]

BLAST of Carg28096 vs. ExPASy TrEMBL
Match: A0A6J1D5M8 (vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017847 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86
Identity = 181/192 (94.27%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAA+ELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAAKELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEIN+DD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFE LEAQ+TV+DLPEVPTS EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQITVQDLPEVPTSNENV 180

Query: 181 EKLDLPNVNFQK 193
           EKLDLP+V  +K
Sbjct: 181 EKLDLPDVPTKK 192

[Close]

BLAST of Carg28096 vs. ExPASy TrEMBL
Match: A0A6J1EBQ2 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432566 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86
Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI+D
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIED 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFE LEAQLTVEDLPE+PTS+EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEIPTSKENG 180

Query: 181 EKLDLPNVNFQK 193
           E LDLP+V  +K
Sbjct: 181 EGLDLPDVPTKK 192

[Close]

BLAST of Carg28096 vs. TAIR 10
Match: AT5G09260.1 (vacuolar protein sorting-associated protein 20.2 )

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77
Identity = 155/191 (81.15%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKPK+T+VD+AILSLKTQRRKLGQYQQQL+ VIEAEK AAR+L+R+K+KDRALL
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVD WLINVEQQL+DIEL SKQKAVFESLK GNNAIKAIQSE+N+DD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSE--- 180
           VQKLMDDTAEAKAYQDE++AILGEKLS EDEE+ILAEF+ LE+ L VED+PEVPT+E   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 181 ENAEKLDLPNV 189
           E  EK+DLP+V
Sbjct: 181 EEPEKMDLPDV 191

[Close]

BLAST of Carg28096 vs. TAIR 10
Match: AT5G63880.1 (SNF7 family protein )

HSP 1 Score: 278.1 bits (710), Expect = 5.4e-75
Identity = 149/189 (78.84%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+K+KDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KK+ QEELLKQVD W+INVEQQL+DIEL SKQKAVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSE-EN 180
           VQKLMDDTA+AKAYQDE+NAILGEKLS EDEE ILAEF+ LE+QL V+++PEVPT E E 
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 AEKLDLPNV 189
           +EKLDLP+V
Sbjct: 181 SEKLDLPDV 189

[Close]

BLAST of Carg28096 vs. TAIR 10
Match: AT5G63880.2 (SNF7 family protein )

HSP 1 Score: 264.6 bits (675), Expect = 6.1e-71
Identity = 149/213 (69.95%), Postives = 176/213 (82.63%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+K+KDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KK+ QEELLKQVD W+INVEQQL+DIEL SKQKAVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQD------------------------EINAILGEKLSEEDEEQILA 180
           VQKLMDDTA+AKAYQD                        E+NAILGEKLS EDEE ILA
Sbjct: 121 VQKLMDDTADAKAYQDCENLYNLFCRAFVFDDSIYISECQELNAILGEKLSAEDEEDILA 180

Query: 181 EFEGLEAQLTVEDLPEVPTSE-ENAEKLDLPNV 189
           EF+ LE+QL V+++PEVPT E E +EKLDLP+V
Sbjct: 181 EFDNLESQLIVDEMPEVPTKESEESEKLDLPDV 213

[Close]

BLAST of Carg28096 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           M  LF K  + T   + +  L      L + +  L      E   A+E  R K K  A+ 
Sbjct: 3   MNRLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQ 62

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
            LK+K+  E+ ++Q+  + + +  Q+  +E A       ++L+ G +A+KA+Q   NIDD
Sbjct: 63  CLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDD 122

Query: 121 VQKLMDD----TAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLE-AQLTVEDLPEVP 175
           V K MD+    T   K  Q+ ++A  G   ++ DE+++ AE + LE A+L  + L  VP
Sbjct: 123 VDKTMDEINEQTENMKQIQEALSAPFG--ANDFDEDELEAELDELEGAELEEQLLQPVP 179

[Close]

BLAST of Carg28096 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 51/187 (27.27%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60
           M  LF K  +  +  + +  L      L + ++ L     AE   A+E  R K K  A+ 
Sbjct: 2   MNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQ 61

Query: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120
            LK+K+  E  ++Q+  + + +  Q+  +E A       ++L++G +A+KA+Q   NIDD
Sbjct: 62  CLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDD 121

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKL---SEEDEEQILAEFEGLEAQ----------LTV 175
           V K MD+  E      +I   L   +   ++ DE+++ AE + LE++           T 
Sbjct: 122 VDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATTA 181

The following BLAST results are available for this feature:

BLAST of Carg28096 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033577.1	2.0e-92	100.00	Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyro...	[more]
XP_022928588.1	2.8e-89	97.92	vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita moschat...	[more]
KAG6603293.1	3.6e-89	97.92	Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyro...	[more]
XP_023520722.1	6.1e-89	97.92	vacuolar protein sorting-associated protein 20 homolog 2-like isoform X2 [Cucurb...	[more]
XP_022967900.1	1.2e-87	96.35	vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita maxima]	[more]

BLAST of Carg28096 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FY89	3.6e-76	81.15	Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana...	[more]
Q8GXN6	7.6e-74	78.84	Vacuolar protein sorting-associated protein 20 homolog 1 OS=Arabidopsis thaliana...	[more]
Q503V0	2.3e-30	42.71	Charged multivesicular body protein 6 OS=Danio rerio OX=7955 GN=chmp6 PE=2 SV=3	[more]
Q5ZL55	6.3e-28	40.00	Charged multivesicular body protein 6 OS=Gallus gallus OX=9031 GN=CHMP6 PE=2 SV=...	[more]
Q6NU11	4.1e-27	40.00	Charged multivesicular body protein 6-B OS=Xenopus laevis OX=8355 GN=chmp6-b PE=...	[more]

BLAST of Carg28096 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPH4	1.3e-89	97.92	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita mosch...	[more]
A0A6J1HVP8	5.6e-88	96.35	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita maxim...	[more]
A0A1S3B5R7	1.1e-86	95.83	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucumis melo OX...	[more]
A0A6J1D5M8	1.8e-86	94.27	vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 OS=Momo...	[more]
A0A6J1EBQ2	2.4e-86	94.79	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita mosch...	[more]

BLAST of Carg28096 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09260.1	2.6e-77	81.15	vacuolar protein sorting-associated protein 20.2	[more]
AT5G63880.1	5.4e-75	78.84	SNF7 family protein	[more]
AT5G63880.2	6.1e-71	69.95	SNF7 family protein	[more]
AT2G19830.1	4.3e-08	29.61	SNF7 family protein	[more]
AT4G29160.1	2.2e-07	27.27	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	GENE3D	6.10.250.1710		coord: 116..168 e-value: 2.5E-5 score: 26.1
None	No IPR available	GENE3D	1.10.287.1060		coord: 14..90 e-value: 2.8E-10 score: 42.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..193
None	No IPR available	PANTHER	PTHR22761:SF50	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20 HOMOLOG 1	coord: 2..191
None	No IPR available	PANTHER	PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 2..191
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 16..177 e-value: 1.3E-39 score: 135.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28096-RA	Carg28096-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005768	endosome