Carg28033 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28033
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionO-fucosyltransferase family protein
LocationCarg_Chr03: 1829584 .. 1832529 (-)
RNA-Seq ExpressionCarg28033
SyntenyCarg28033
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGGTGCTTCTTCCTCTTTTCTAATCCTATAATGAGTTATACTTGATGATAGTTTGAAACGGGTATCAATTGATTCGCTTCATGCTTCAAACTAAGACGCGAACTCCCTTGGATAAAGATCTTTGTTCTTCATGTGTTTGTGATCTTTTCTAGAAAGAACACAGAATCTGAATTTGTTCTCTGCATTGCAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGTTAGTCGTATTGAACTCAGAGACGACAGCCGCTACTCCAATCTTTTGATAATAAATCGAACTGCCAGCCCTCTTTCATGGTAAATCAAACTTGGGGTAATAAGATTCTTTTATGTCTTTTGTATGTGTCTGTGAGATCCCATATCGGTGGGAGAGAGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGCAGACGAGTTTTAAAACGTTGAAGGGAATCCCAGAAGGGAAAACCCAAAGAGGACAATATCTACTAGCGGTGGGATTGGGCTGTTACAAATGTTATCAGAGCCAACCGGGCGGTGTGCCAGCGAGGACGTTGGTCCTCCAAGGGGGGTGGATTGCGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGAGTGTAGAAATCTTTCCCTAGCAGACACGTTTTAAAATATTGAGGGGAAGCCCAGAAGGAAAAACCCAAAGAGGACACTATCTACTAGCGGTGAGCTTGGGCTGTTACAAATAGTATCAGAACCAGACACCAGACAGTGTGCCACCGGGCGGTAAAAGCTCAATTAGGCTCGTCTTTTTAATGTTTTGTTTTCATGCATTTCTTTGCAACTTGGTACGACGGATATTTCAATTTAAGATCCCAATTTATGAATGATTAGGGCGTTAATGCCGTGATAACTCTTTAGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTTTTTGAAACCATATTAGGTTCTTTCTTTTGTTATTCATTTTGCAGTCTTCCTACGAATCATGACAATAACGGAGAGCCTATCGCTGGTTAGCTCGCTGCTTACGAAACCTAGCTTTCCGGTGCATTTCTTTATTTTCTACGTTGCCACTGTGAAATAGATTGTTAGTAGATTCTCAACTTCCGTGTTATAAGGATTTAGGCATTGCTTTATTTTGGTTTTCCCTGGATGCTTCTAGCATAAACTCACCCTCTTAAGAAATATTAGATTACTACTGAACTCTTGATGATTTCGAAGAAGACTTTCACTTTAGAATACCCTGACACGAATAACGAACCTAAATTTTAAAGACTCACGAGGGAAGTAGGCATAATTCTTAGAAACAGAGAAACTAATAAACATAATAGGTTCCTATGGGCCTAATTTTCCTCTCCTAGGATGACGCTAGCCAGTATTCCTTGCCGGGCTTGGAGTTGATTGAAAAGTAGCGCTCAGAGGATTGTTAATATGGAAATGGAAGCTCGGTTTCCTCGCACTCATTATTTGAATTGGGATTTGCCTCTTTCTTTCTTCTACCGCCTGTGATCTATCTCCGTAGAGCTTTGCCAACGTAGGATAGCTTCTAAGTCATATCCAAAGTACTTGGAAATTCGTTTTTTTCCGTCTTTGATGAACTTTGAAGTTTTTGTCATCAGGCATGGTTGTATAGGTGAAAGGCAGAAGAACATAGACAGGGCTGTATGCTAAACTATTTGCAGAAAGCAAGCCAGGTTGTAACCATTTATTTATGGATAGGTTGTAGAAAATCTTGAAGTACATGAAATTTATGGTTTTGGTGCATTGGAAACTGTACAGAGGCACCATTTTATTTATTTCATAGGAAAATTTCGATGAAATCCGAAGCGAGTAATTAGCTTACCAGTGAGTGGTTTTGGTAAGCTTGATATTACGCTCAGAGACCGAGTTTGTTCTGCAACGTTCTCTGTCTTCTGTTTGGGCTTACTTATATGTATACTGTTGTGTATAGCTGTGAGAAAAGATCTACAACGTTGTTTCTCATCATTTTGGAATATAGTTCTATTAAGTAATAATTGAAAAGAATTGCTGATCAAATAGATGAAAACTGATTACGACTCATCCATGTTCGTCGTGGAGATAAAATAAGACATTATAAGTCAGGATGTTGATAGAAGCTTAATCCACATTCTCGACAGGATACACGGCCTTGAGTTTATGCTTAAGAGAATAGCCAATGGGTTTCCGCCATGGGCGGACACTTTTTATTGCTTCAAATGAGAGAATGGCCGGGTTCTTCTCGGCCTCTCTTTGCTCGGTGAGTCCATCTCACTAACGTTTTTTAGTTCGCTCGATGGAGCTGAATGTTGGTTCTTATTGCCATTTAGTATAATAGTGCCCGAAGACATTCGTTCAAAAAGATCGATCTTCTTGTTGTATCCGATAGCGATATAATAAATCAATTGAACTGTCTCTCATTTAGCCTACACCACCATTATTCATGATACCCAAACAATTCTCTGCAGGTACAAGCTGGCTGTATTCCCTTCTCGAACATAGCCATATTTCTGATCCTGTGGTTAAAGAACAATTTATCAGTTGTGTCAGGTGATCGAGAGGCTATTGGCGGGTGCCAAATACGATCATCAGAACGTTCAAAGAAGACGATTACAGATCTTAGCCTTCACCGATGACCCAAAGAGAAGTCACGAA

mRNA sequence

ATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTTTTTGAAACCATATTAGTCTTCCTACGAATCATGACAATAACGGAGAGCCTATCGCTGGTGATCGAGAGGCTATTGGCGGGTGCCAAATACGATCATCAGAACGTTCAAAGAAGACGATTACAGATCTTAGCCTTCACCGATGACCCAAAGAGAAGTCACGAA

Coding sequence (CDS)

ATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTTTTTGAAACCATATTAGTCTTCCTACGAATCATGACAATAACGGAGAGCCTATCGCTGGTGATCGAGAGGCTATTGGCGGGTGCCAAATACGATCATCAGAACGTTCAAAGAAGACGATTACAGATCTTAGCCTTCACCGATGACCCAAAGAGAAGTCACGAA

Protein sequence

MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAENLRDASEKVFFETILVFLRIMTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE
Homology
[Close]
BLAST of Carg28033 vs. NCBI nr
Match: KAG7033578.1 (hypothetical protein SDJN02_03302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.4 bits (838), Expect = 7.0e-86
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60

Query: 61  QVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAENLRDASEKVFFETILVFLRI 120
           QVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAENLRDASEKVFFETILVFLRI
Sbjct: 61  QVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAENLRDASEKVFFETILVFLRI 120

Query: 121 MTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE 165
           MTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE
Sbjct: 121 MTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE 164

[Close]
BLAST of Carg28033 vs. NCBI nr
Match: XP_022932890.1 (uncharacterized protein LOC111439414 isoform X2 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 94  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 153

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 154 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAIL 213

[Close]
BLAST of Carg28033 vs. NCBI nr
Match: KAG7033584.1 (hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 122 MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 181

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 182 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLLINRTASPLSWFMECKDRNNRSAIL 241

[Close]
BLAST of Carg28033 vs. NCBI nr
Match: KAG6603306.1 (hypothetical protein SDJN03_03915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 94  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 153

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 154 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAIL 213

[Close]
BLAST of Carg28033 vs. NCBI nr
Match: XP_022932889.1 (uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 121 MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 180

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 181 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAIL 240

[Close]
BLAST of Carg28033 vs. ExPASy TrEMBL
Match: A0A6J1EY95 (uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439414 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 121 MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 180

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 181 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAIL 240

[Close]
BLAST of Carg28033 vs. ExPASy TrEMBL
Match: A0A6J1F3E8 (O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC111439414 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 108/141 (76.60%), Postives = 109/141 (77.30%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 94  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 153

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 154 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAIL 213

[Close]
BLAST of Carg28033 vs. ExPASy TrEMBL
Match: A0A6J1HRU4 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 107/141 (75.89%), Postives = 108/141 (76.60%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILH STNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 121 MPSRMCINPIHNKKGILHQSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 180

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 181 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLLINRTASPLSWFMECKDRNNRSAIL 240

[Close]
BLAST of Carg28033 vs. ExPASy TrEMBL
Match: A0A6J1HW65 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 107/141 (75.89%), Postives = 108/141 (76.60%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGILH STNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY
Sbjct: 94  MPSRMCINPIHNKKGILHQSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 153

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QVQSTGMKLGSRVVAHVDQ                                DRNNRSAIL
Sbjct: 154 QVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLLINRTASPLSWFMECKDRNNRSAIL 213

[Close]
BLAST of Carg28033 vs. ExPASy TrEMBL
Match: A0A5D3DWC1 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00060 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.4e-44
Identity = 95/141 (67.38%), Postives = 102/141 (72.34%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKG+LH STNASSEE WE NSCAMDSLYDMDLISDTVPVILDNSK WY
Sbjct: 120 MPSRMCINPIHNKKGLLHQSTNASSEESWEANSCAMDSLYDMDLISDTVPVILDNSKSWY 179

Query: 61  QVQSTGMKLGSRVVAHVDQ--------------------------------DRNNRSAIL 110
           QV ST MKLG+R VAHV+Q                                DRNNRSA++
Sbjct: 180 QVLSTSMKLGARAVAHVEQVSRIELRDSSHYSNLLLINRTASPLSWFMECKDRNNRSAVM 239

[Close]
BLAST of Carg28033 vs. TAIR 10
Match: AT3G56750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). )

HSP 1 Score: 141.4 bits (355), Expect = 6.7e-34
Identity = 73/140 (52.14%), Postives = 91/140 (65.00%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPS MCINPIHNKKGIL+ S N ++EE W  +SCAMDSLYD+DLIS+ +PVILD+SK W+
Sbjct: 113 MPSGMCINPIHNKKGILNRSDNKTTEEGWLGSSCAMDSLYDIDLISEKIPVILDDSKTWH 172

Query: 61  QVQSTGMKLGSRVVAHVD-------------------------------QDRNNRSAILL 110
            V ST MKLG R +AHV                                +DR+NRSA++L
Sbjct: 173 IVLSTSMKLGERGIAHVSGVTRHRLKESHYSNLLIINRTASPLAWFVECKDRSNRSAVML 232

[Close]
BLAST of Carg28033 vs. TAIR 10
Match: AT2G41150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 71/141 (50.35%), Postives = 87/141 (61.70%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGIL+ S N + EE WE +SCAM+SLYD+DLIS+ +PVILD+S+ W+
Sbjct: 113 MPSRMCINPIHNKKGILNRSNNETREESWEVSSCAMESLYDIDLISEKIPVILDDSETWH 172

Query: 61  QVQSTGMKLGSRVVAHV--------------------------------DQDRNNRSAIL 110
            + ST MKL  R  AHV                                 +DR NRS ++
Sbjct: 173 IMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLLLINRTASPLAWFVECKDRGNRSDVM 232

[Close]
BLAST of Carg28033 vs. TAIR 10
Match: AT2G41150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 70/141 (49.65%), Postives = 87/141 (61.70%), Query Frame = 0 

Query: 1   MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWY 60
           MPSRMCINPIHNKKGIL+ S N + EE WE +SCAM+SLYD+DLIS+ +PVILD+S+ W+
Sbjct: 113 MPSRMCINPIHNKKGILNRSNNETREESWEVSSCAMESLYDIDLISEKIPVILDDSETWH 172

Query: 61  QVQSTGMKLGSRVVAHV--------------------------------DQDRNNRSAIL 110
            + ST MKL  R  AHV                                 +DR NRS ++
Sbjct: 173 IMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLLLINRTASPLAWFVECKDRGNRSDVM 232

The following BLAST results are available for this feature:
BLAST of Carg28033 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7033578.17.0e-86100.00hypothetical protein SDJN02_03302, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022932890.14.8e-5076.60uncharacterized protein LOC111439414 isoform X2 [Cucurbita moschata][more]
KAG7033584.14.8e-5076.60hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6603306.14.8e-5076.60hypothetical protein SDJN03_03915, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022932889.14.8e-5076.60uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata][more]
BLAST of Carg28033 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg28033 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EY952.3e-5076.60uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1F3E82.3e-5076.60O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC11143941... [more]
A0A6J1HRU42.0e-4975.89O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 ... [more]
A0A6J1HW652.0e-4975.89O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 ... [more]
A0A5D3DWC19.4e-4467.38O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of Carg28033 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G56750.16.7e-3452.14unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41150.11.1e-3150.35unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41150.21.4e-3149.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31469OS07G0633600 PROTEINcoord: 79..109
NoneNo IPR availablePANTHERPTHR31469:SF8PLANT/PROTEINcoord: 79..109
NoneNo IPR availablePANTHERPTHR31469:SF8PLANT/PROTEINcoord: 1..78
NoneNo IPR availablePANTHERPTHR31469OS07G0633600 PROTEINcoord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28033-RACarg28033-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane