Carg28032 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28032
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionO-fucosyltransferase family protein
LocationCarg_Chr03: 1832530 .. 1833728 (-)
RNA-Seq ExpressionCarg28032
SyntenyCarg28032
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCAAAGTTACATATCAATCAATCAATCCATAATATCCTTTACGATTAGTTTATAATTCTCAGTACTGACTACGATACTTGCTCGATCCAAGTTCTTGTCCTTCACCGGATGCGATCTATTAGCATCCCTGTTTGCGCCGAAGATTACAATCTCTCTTCCACTCTGCAATTTCCATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGGTAATTTTCATGAAGTTTTTCTGATTTCTGGGGCTTAATCTTTACATGAACATGTTTTCTCCTAGTTTAATTTGGTGGATTGGCATGTTAGGATTTCTGTGTGAAAGGGGTTTGGAATTGGATTAGCAGTAACTCATCAGCACTGTAGTGGTTCTATCATCACTAAACGTAGAATTATCCGTTGAGGATGGTTGGGAGGGAGTCACACGTTGGCTAATACATCTCTAGATGAAAGCCATGTGGACAATAGCATACCATTGTGGAGATACTTGGTATCAGAGTCATGCCTTTAACTTAACCATGTCAATAGAATCCTCAAATGTCGAACCAAGAAGTTGTGAGCCTTAATTAAGGGGAGGTTGTTCGAGGACTCTATAGGCCTCAAGGGAGGCTCTATGGTGTACTTCGTTCGAGGGGAGGACTGTGGAGATTCGTGATTCCTAACATTATCATATCTTGAAACTCACGAGTTCAAGAAACTTCTGTTGGCCCCTTGCTTGATCTTTTATGCTGTGTTATTGGTATGAGGTGCCATTTAGTTTGTCTCAGCTCTTTGTAATGGTAATGGATTGGTCCAACGCCGTTAAGTTCAGCATAATTTATTGGTAGAATGCTTTTGCATAACCTACTTAGACAATTTACTTTACTTTCTTTTTTGGTGCAGAGTATTTTGA

mRNA sequence

ATTCAAAGTTACATATCAATCAATCAATCCATAATATCCTTTACGATTAGTTTATAATTCTCAGTACTGACTACGATACTTGCTCGATCCAAGTTCTTGTCCTTCACCGGATGCGATCTATTAGCATCCCTGTTTGCGCCGAAGATTACAATCTCTCTTCCACTCTGCAATTTCCATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTTGA

Coding sequence (CDS)

ATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTTGA

Protein sequence

MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKNLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Homology
BLAST of Carg28032 vs. NCBI nr
Match: XP_022932889.1 (uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 119

BLAST of Carg28032 vs. NCBI nr
Match: KAG7033579.1 (hypothetical protein SDJN02_03303 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 119

BLAST of Carg28032 vs. NCBI nr
Match: XP_022967807.1 (uncharacterized protein LOC111467213 isoform X1 [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLIST GVSSSFPSSNSIREIFRFKN
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTNGVSSSFPSSNSIREIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 119

BLAST of Carg28032 vs. NCBI nr
Match: KAG7033584.1 (hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGV-SSSFPSSNSIREIFRFK 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLIST GV SSSFPSSNSIREIFRFK
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTNGVSSSSFPSSNSIREIFRFK 60

Query: 61  NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120

BLAST of Carg28032 vs. NCBI nr
Match: XP_023545162.1 (uncharacterized protein LOC111804548 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGV-SSSFPSSNSIREIFRFK 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLIST GV SSSFPSSNSIREIFRFK
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTNGVSSSSFPSSNSIREIFRFK 60

Query: 61  NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  NLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120

BLAST of Carg28032 vs. ExPASy TrEMBL
Match: A0A6J1EY95 (uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439414 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.9e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 119

BLAST of Carg28032 vs. ExPASy TrEMBL
Match: A0A6J1HRU4 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLIST GVSSSFPSSNSIREIFRFKN
Sbjct: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTNGVSSSFPSSNSIREIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF
Sbjct: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 119

BLAST of Carg28032 vs. ExPASy TrEMBL
Match: A0A0A0L0X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G430860 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MA  +TQK KPKPRSP +FFFV+L+ IAFLFLFSSLIST G SSSFPSSNSI++IFR KN
Sbjct: 1   MAFPRTQKPKPKPRSPLIFFFVSLSAIAFLFLFSSLISTNG-SSSFPSSNSIQKIFRLKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           L QKQRRNRH FS NDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQR F
Sbjct: 61  LTQKQRRNRHFFSVNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRTF 118

BLAST of Carg28032 vs. ExPASy TrEMBL
Match: A0A5D3DWC1 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00060 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.8e-48
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MA  +TQK KPK RSP +FFFV+LA IAFLFLFSSLIST G SSSFPSSNSI++IFRFKN
Sbjct: 1   MAFPRTQKPKPKHRSPLIFFFVSLAAIAFLFLFSSLISTNG-SSSFPSSNSIQKIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           L QKQRR RH FS NDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQR F
Sbjct: 61  LTQKQRRGRHFFSVNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRTF 118

BLAST of Carg28032 vs. ExPASy TrEMBL
Match: A0A1S3C1H9 (O-fucosyltransferase family protein OS=Cucumis melo OX=3656 GN=LOC103495824 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.8e-48
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0

Query: 1   MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKN 60
           MA  +TQK KPK RSP +FFFV+LA IAFLFLFSSLIST G SSSFPSSNSI++IFRFKN
Sbjct: 1   MAFPRTQKPKPKHRSPLIFFFVSLAAIAFLFLFSSLISTNG-SSSFPSSNSIQKIFRFKN 60

Query: 61  LNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           L QKQRR RH FS NDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQR F
Sbjct: 61  LTQKQRRGRHFFSVNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRTF 118

BLAST of Carg28032 vs. TAIR 10
Match: AT2G41150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 8.6e-23
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0

Query: 5   KTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKNLNQK 64
           K  K K  P S  L     +AV AFL LF+S+IST G+  + P   ++   F       +
Sbjct: 6   KPHKLKATPGSQRLVLLCIVAV-AFLLLFTSVISTGGL--ALPYRTTLIGYF------VR 65

Query: 65  QRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
             RN+   S +DK+LYWGNRIDCPGK+CE+C GLGHQESSLRCALEEAMFL R F
Sbjct: 66  STRNKTQHSLSDKYLYWGNRIDCPGKNCETCAGLGHQESSLRCALEEAMFLNRTF 111

BLAST of Carg28032 vs. TAIR 10
Match: AT2G41150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 8.6e-23
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0

Query: 5   KTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKNLNQK 64
           K  K K  P S  L     +AV AFL LF+S+IST G+  + P   ++   F       +
Sbjct: 6   KPHKLKATPGSQRLVLLCIVAV-AFLLLFTSVISTGGL--ALPYRTTLIGYF------VR 65

Query: 65  QRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
             RN+   S +DK+LYWGNRIDCPGK+CE+C GLGHQESSLRCALEEAMFL R F
Sbjct: 66  STRNKTQHSLSDKYLYWGNRIDCPGKNCETCAGLGHQESSLRCALEEAMFLNRTF 111

BLAST of Carg28032 vs. TAIR 10
Match: AT3G56750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 0

Query: 5   KTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKNLNQK 64
           K Q+ KP   S  L  F  + V +FL LFSS+IST       P   ++ + F +    ++
Sbjct: 6   KAQRTKPTSGSQRLVLF-CIVVFSFLLLFSSVIST--GKLGLPYQQTLIDYFVWSPRGKR 65

Query: 65  QRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVF 120
           Q       S ++K+LYWGNRIDCPGK+CE+C GLGHQESSLRCALEEAMFL R F
Sbjct: 66  QH------SLSEKYLYWGNRIDCPGKNCETCAGLGHQESSLRCALEEAMFLNRTF 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022932889.11.8e-59100.00uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata][more]
KAG7033579.11.8e-59100.00hypothetical protein SDJN02_03303 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022967807.11.2e-5899.16uncharacterized protein LOC111467213 isoform X1 [Cucurbita maxima][more]
KAG7033584.12.9e-5798.33hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023545162.12.9e-5798.33uncharacterized protein LOC111804548 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EY958.9e-60100.00uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HRU45.7e-5999.16O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 ... [more]
A0A0A0L0X31.6e-4884.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G430860 PE=4 SV=1[more]
A0A5D3DWC17.8e-4884.87O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3C1H97.8e-4884.87O-fucosyltransferase family protein OS=Cucumis melo OX=3656 GN=LOC103495824 PE=3... [more]
Match NameE-valueIdentityDescription
AT2G41150.18.6e-2353.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41150.28.6e-2353.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G56750.13.3e-2250.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31469:SF8PLANT/PROTEINcoord: 3..119
NoneNo IPR availablePANTHERPTHR31469OS07G0633600 PROTEINcoord: 3..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28032-RACarg28032-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006004 fucose metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016740 transferase activity