Carg28014 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28014
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnuclear speckle splicing regulatory protein 1-like
LocationCarg_Chr13: 4679169 .. 4686378 (+)
RNA-Seq ExpressionCarg28014
SyntenyCarg28014
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGACCCTCAGTTTCACGGCGGCTCCCCCTCCTTCGGATCAGGCACTGCTGTTCTGCTCCCTTTTTCATCTCTGGATCTCAGGTATTCTTCTTAATTCCAATCTCTGTCTTTCAATCGTTCTTGTTTTGCTATATTTTGAATTCAATCGTCTGGTTTCATTGCAACCGATTTTGCTCCTCAATGGGTTCATCCGATTTCTCACTCGAATATCAGCTTCAATTACTTCTGGCCTGTTTGGAATTGCCAAAATCACTTTTGCAATTGCGCAGAGGATGAAATTGATTTTTGAAGTGTTAGTTGGTAGATGATTTTTGATAGGGTGACTGACCTGAAATCAGCTCCAAAATTTACCTGGATTTTATTCAGCTTGCCCATAAATATAAAAACACGATTCTCAGCCCTGAACAATTTCTTTGCTTTCGATCTTTTCCGCTTTCTCTCACCATTGTAGCATCTTCAGAGGACTCTTTCATCTCTGGCCGCTTTCTCTCTCGTTCTGCTGATCATTTCGTTGGTTTTCGCTGGTAGTTGTTAGCTTCATCCTTGTTTGGGTTTTGGACGTGTGGTTTCCACATTGATTGTGATCTGTTTGCATTATTCTTAAATTTTTGAACTAGGTTTTCAATTTGTTTATGTAATTTTGACCGGTGGTTTTGATTTGTGTTTCGTTTTGAACTAGGTTTTCGATTTGTTCCGTAATTGCTTCATTGATTAGGTTGCCAATTGTGTTTGTTTTTCTTACTTTTGATTGGCGGTGTGTTTCTGGAATTTGACGGCAGTGAGTTTTGTTTCTTTGGTGTGTTTTTGTTTGTGCTTTTGGTGGTATTGCATTGCTGGAGTTTGCCTTCATTTGTGAAGCTTTTCTGTTTTCGATTTTGATCTTACTGATGGGGCTTTTTTTGTTAATTGTATATATGAAAATCCTTGTTGGAGCATTGTTAGTTGGAAGCTTTTGGCTACCATTATATTTCTAGGGAGCTTTTCTTTGGTTGTCATTGTTTTGATTGTGGTTAGATCAGTAATCTTCCACCATTTTGTTTCCTTCTCATCCTCCTCCTCATCTTCCTCCTCATCTGATCAATAATCTTACCTCTCTTTCTACTTTTGCTTCTGTTTTTTTGTGAATAGTTCATGTAGCTATATATAATTTTTTTTTTTATCATAATTCTGGTGTGAATAGTTAATTTAAGTTAACAAATATTATATGTAAATCACTTCAAACCAAACATTCAAATGGCTATATGAAAATCACTTTGACAAAACCAATTGTAATTAGATATAATTTTATGAAATCACTGATACTACAATGACTCTCAAACATGCCCTTCATGATTAAACCCATTTGAGTTTGAGCATGCTTGTTCTATCCCGTTTGGTTTTGTGTTCAACTCATTTCGGATTTTACACTTCTTCAGTTCTTATTTGTTTCCATCTTATTGGTTGTTTTGTTTCTCATGTTCTTCATTTTTGCGTGCAATTTTTTTCAGTTCTTAATCTCTTCGATTTGATTATTCTTTTTCTTCTCTTTTTGCACTTGTCCCATTGCCCTAGATTTCAATTTCATTTTCTCTGTTCTCTTCAATTTTGATTTTGCAAGTCCAGTCATCATCTCCACCAAGTGTTTTTCCAATTCCACCTGTGGTCATCTAGTCCCTGAACCCATATCAAACTGCTCTGGCTAATTTTATTGGTACAAAGGATTGAAACAGAAATTGCTGAAAACTTGAATAACCAAAAAAGAAAAAGAAAAAGAAAAAAAAAAAAAAAGGAAAATTTTCCAAAGCAACTTAGAGGGACCTCAACGTGAGCCAGTTGAAGCTAAGACAGAAAAATACACTTTTGGTATCTCAGGTTTGAGTTTTGTAGCATTTAGGTACTTAGTTTTCAAACTCAACAATTTAGTCCACGAGTTTTGGATTTAGTTGCATTTAGTTCTTCCGTCCAAATATTTGTCAATTATTAATGGAATGTTAGATGTAACATTTTTTATTAAAATTTTTTAATTTCTTGAAATAAAATTTTCTTTTTTCCTTCTCTCCCTTCTCTTCTCTCTTCTTTCTCCCTCCTCCTTCCATGGCCGTTGCCGTCCACTATCATCACAACTAATTGCCTCTTTCGACAGACCATAATGACAATCCGATAGCCTTTGATTGGCGGTGACAAACATAGCTTGCACATCCATGGCTTTACGACCCACGGATGATAACAATCCCTTAAATTTGTGACTAACCACTCCTCCCAATTGACGATGACTTGACAATACTCACGAATTGGTCTGGCAAAGCAGTGGAAACCTGTGAGCTAATCCAGATTTCAGATCTGGAACAAACCCAAATCTGATTCAAGGAGGTGACCGTTGATGGCTTTGTTGTGAGGGGGCAATGACTGACGGTGCAAGTGCGAAGAGGCATTGATTGACGACTTTGCTGCTGCAAAGATTATTCCTTGACGGAGCTGCTGCGAGGACTAACCCTGTGCAACTATCAAAAGAGAAAGAGATGAAGATAAAAGAGGGAGAGTGTAACAGCACTGATACACTGGATCTCATAAGAAGTATTAAGTTGGGTGACCACTTGGGCAGTCCTAAGAGTAGTACTAAGTTGGGTGACCACTTGGGCAGTCCTAGACCATGGGCCCTCCTTTCCACACCAAAAACATTGACCCCAATGATTGTTTCCACATTCATGACACTTGGGTCTATCGTCTCATTTGTTTTCACTTCCCTATTGACCACGCCTAAAGCTGCGGCGTTAACTGTTTGGTCGTCTCTATGGCTGTGATGGAGACGAATCATGACGGTCAATCTGGTCATGACGTCGCTTTTGTCCCACTGACGATGAAAGGGGTTCAACGAGAACTATCAGCTCCCTCCATGGCCTTAGCTACTCTTAGGGCGGCAGCATAAGTAATAGGCGTTATCGCCTCAACAATATTGTAGATCCTCTTGTCTAACCCCAACACAAACCGTTGTGTTGTTCTGTAGTCAGTGTCCACCAACTCCGAGGCGAAACGATTCAACTTGGAAAACTCTCCCGCGTATGGGGTAACAGAACGCCCCCTCTGACACAACTGGGTGAACTCTTGCTGTTTGCGAAGTTGAATATCCTCTGGGTAGTACTCATCAATAAAAGCACCCTTCGAATTTCACCCACGAGATTTGCACCTCCCTCAAGACTAATAATCTCGCAGGTGGACTGCTACTATAGTTTTGCATCATCTCGCAGCATGAATGCTGCACACTCCACCTTCTTATCTTGAGGATAGTTGGTCAACACAAACACTGTCTCTATAGATCTCAACTACATTTGTGCCATAGCCGGATCATTAAAAGTTCCCTTAAAGGTTTGCTCATGCAAGCACCTTGCTTCCTTGGTTGATGATGAAGCATTTGCTTGGTTATCAGCAGTTAGGTTTTGTATAACAGTTTGCAATGCGTCCACCAGAGCAGCTGTTGAGTCTGGTGTGACCTGAGGTACGCTAGTGGTGGGAATGACACAACTACATCAGGAATCCTTGTGTTCTGAACCTCGTCCTCTTCCATCCCTTCCTCTACCCGTAAGTGGGGGTCTCTCCTAATACCTCCTCTTTGAGTTTTAGGTGACATATCTATACAAAACACATAACTACTAAAGCACATACTTATCTATTAGGTTTTATAAACATTCATAATAATACAAGCCACAAATACTTACGGTCATAGCTTTAACATAGTCATCATACATGCCATATCATATTTAGTCTTACCACGTCATAAATCATGCTAACATTTAAAACATGTACATTATATCATACCTTATCAAATACAAATCAATCTACTGCATGCATCATTTAACTAATTAATTTTAATTCTTAAAAGACATACCTGATGGCAACGGTGCGTTTGCAGGAGGACCATGGAAGTACGCTAGAGTAGGCTGGTCTACAAGATCTGTAACTTAAGGCTCTAATACGGTAATATCCCTAATTTTCTTAAGCTAATTAGTGATGTCAACCTAATACATGCTTAGAAATAAAGCCATGATCTTACATAAATAGTTCAAAACATGGAAATTCAACTCAACTCAAGAAAACGTTAACACTAAAATTAGAAATTCAAATGCAACTATTCATTCTCTGAATTAAATCTCAAACAAAACATCTATTGCCCTATTATACCCCCGTTTCAACTTCCATGGTCTCCACAGTATCCACCGTCATCCGTGCGGGAGCCTTGCCTTTACCTGAAAAAAATTATGGTAGCACGTGCTTTGAGTATTTTATGAAATACTTAGTAAGTCACCCACTGTTGAGGTTAGATATGCAAAACATGAGGTTAGATATGCAAAACATGAGTGGGATCTATCTTTCATAAAATTTACATAACCTTAGGCTCTTTTCTAGTTCGGGCAGGGTTGGATGTATGGTATTTCCCCACACACGGCCCACATACACGCACATGGGCCCACCAGGCGGGCTCGTATACTACCCCTGGGCCTAACTTGGTCAGACACAATGCATTACACGTCACCGGATGCCACAAAAAAGCAAAGGCCTACATGATTTCATAGCAAACATAAATATCAAACGTGCGTCGTACTATCATAATATAAAGGGGAAGTATCCCGATGCATATGATATACAAACATGCATGAGGTCCCATGATTTACATTCATGACATAATACTTAATAATACCTTCATTTCATTACTCTTACGCATTCCCTATTATAATTCATTTATGGAACATGTATGCATGACAACATTATTCAATCCATCACACTCATTACATATTAGACTTAAATATCATTTATAGCATTTCAATTCAGTTGAATTGAAATAAAAATAGGGTAATCTGAATTGAAATAAAAATAGGGTAATGGATTACATGCCTACGTAGCAAACATTTCTTATCAATACAAAAATACATAAATATTGCATAACATAGACATTTCACATCTAATATGGTGCATCAAAAGCCACAGGGGATGCACCATCATATAATACACTAAGCTAACACCAACGATAAGTTAAATGCTACAATTTATTTATTTTTTGGAAAACCGAATCGTTACAATTAGCTGATTATTCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCTTTCCATTTATCTTGTAAACCAAGTGATGAAGGCTATTTTACCGTTTGTTCAATGTTGGCCATATTCTGACAATTTATTTTCCTCATAGCTGCTTTACATTTTCTGCCCATATTTAGCAGCCGACGAGGATTGTAGCCAATGTTTAAGAATTAGGCCATTGTGTTCATACAATCATTCAGGACCTTGAAAAGTATTTTTATTTTGTTTAATCTTTCCTGGTAGAGAATTGGCGTTTTATGCATATGGAAGAATTTTGTATGTTTTATGCATCAATGAAGTACATTCAAGTCTTCACAGGAACAGTTAGAAGACATTAAAAATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCATACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGATGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATGTAAGCTAGCTTGTATATGACTGTGTCATTAACAACAATATCGTGGTTGTATGCTACCCTTAATTTTATTTTTCTCCCTTGAAATATCAATTTAGATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTTGATTACGATGGAGTCTATGATGAAATGAAAGAAAAGGCTGTTCTGCCTCGAGCATATGATCGTGAAGAGCGAAAGGTATGTTTATAATTTGATCCCAAACTCGTGTAAAAATTCAGTATCACCCTAATATAATGCTCTGCCATTGTGGTGAAATTACTTATTTGCTCACTGCCTTTTCTATTGCAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTATGTTTAACTTTGCACGCTGTTTCTTTTTCTTTTCGTTTTATAGTTTTATAAGTTATTATACTTTGCTAAATGCCCTCCGTGACAAAATGAGCGAGTATAAGTTATTTGTGACTGAACGAGGAACATTGTGACAAAATGAGCGAGTATAAGTTATTTGTGACTGAACGAGGAACATTGAACCTAACAAGGGTCCTAATATGCCACCACTAATAAGGGTCTAATATAATCATAAAATGATTTAGGACCCTTGTTAGGAACATTGAATAAGGTGTAGAAATCTCTCCCTAGCAGATGAGTTTTTAAAAATCTTGAGGGGAAGCCCGGAAGGGTAAGTCTGAAGAGGACAATATCTCTTTAGTGGTGGGCTTGGGTCGTTTCAGCAATCCATTATCTTGTTCTTGGGTTATCTTAAGAAATTGCTTTATGCTTTCGTTAATGTGTGTTTTTCATTGACAGCCAATTGTCTGATTGTTCTTTTCGTTCTAATTTGAAGGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCTACAGAAGCTTCAATCAGAGAAGCAGGCTGAAGTCCAGAAATTTGAAGAAAGCATGAAGAGAGTGCTAATGCTGATATCGTTAATGATCATCAGTCACCGAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGATAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCGTCTGATGTACGAGGTACTAGCCCCCTCCATTACACAATAAAACTCCAGTTGAGAAAACAGCCCGAACATGACCAAGGTGAACAACAACCAAAGCGCGATCATCATAAAAGAAGTGAAAATGCTGTCGCTGCTGCAAAAGAGCGATTTTGGGCTCGAAAAAGAACAAAGGAGGTGTGAAATACTTAACCTGGATGGATTAAACTGAGGACAAATATGTAAATGTTATTGTTCTATGGATGATAGTTGATAGTTATGTTCTTAATGGGTCAAATTCATCTTGGATCTCTGGCTTTGACATC

mRNA sequence

TCGACCCTCAGTTTCACGGCGGCTCCCCCTCCTTCGGATCAGGCACTGCTGTTCTGCTCCCTTTTTCATCTCTGGATCTCAGGAACAGTTAGAAGACATTAAAAATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCATACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGATGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTTGATTACGATGGAGTCTATGATGAAATGAAAGAAAAGGCTGTTCTGCCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCTACAGAAGCTTCAATCAGAGAAGCAGGCTGAAGTCCAGAAATTTGAAGAAAGCATGAAGAGAGTGCTAATGCTGATATCGTTAATGATCATCAGTCACCGAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGATAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCGTCTGATGTACGAGGTACTAGCCCCCTCCATTACACAATAAAACTCCAGTTGAGAAAACAGCCCGAACATGACCAAGGTGAACAACAACCAAAGCGCGATCATCATAAAAGAAGTGAAAATGCTGTCGCTGCTGCAAAAGAGCGATTTTGGGCTCGAAAAAGAACAAAGGAGGTGTGAAATACTTAACCTGGATGGATTAAACTGAGGACAAATATGTAAATGTTATTGTTCTATGGATGATAGTTGATAGTTATGTTCTTAATGGGTCAAATTCATCTTGGATCTCTGGCTTTGACATC

Coding sequence (CDS)

ATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCATACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGATGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTTGATTACGATGGAGTCTATGATGAAATGAAAGAAAAGGCTGTTCTGCCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCTACAGAAGCTTCAATCAGAGAAGCAGGCTGAAGTCCAGAAATTTGAAGAAAGCATGAAGAGAGTGCTAATGCTGATATCGTTAATGATCATCAGTCACCGAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGATAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCGTCTGA

Protein sequence

MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKKALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFNLQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMKRVLMLISLMIISHRIPQLAFPVSKDNRTGSSPRRAPFEFKQNNTV
Homology
BLAST of Carg28014 vs. NCBI nr
Match: KAG7019348.1 (Nuclear speckle splicing regulatory protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.2 bits (1284), Expect = 2.2e-137
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMKRVLMLISLMIISHRIPQLAFPV 240
           LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMKRVLMLISLMIISHRIPQLAFPV
Sbjct: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMKRVLMLISLMIISHRIPQLAFPV 240

Query: 241 SKDNRTGSSPRRAPFEFKQNNTV 264
           SKDNRTGSSPRRAPFEFKQNNTV
Sbjct: 241 SKDNRTGSSPRRAPFEFKQNNTV 263

BLAST of Carg28014 vs. NCBI nr
Match: XP_022927406.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_022927407.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata])

HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-106
Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEE 216
           LQKNIAYGAGNAVEPREP QKLQSEKQAEVQK ++
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKK 215

BLAST of Carg28014 vs. NCBI nr
Match: XP_022973152.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973153.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973154.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 2.6e-106
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEE 216
           LQKNIAYGAGNAVEPREP QKLQSEKQA+VQK ++
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQADVQKMKK 215

BLAST of Carg28014 vs. NCBI nr
Match: XP_023520694.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 218/261 (83.52%), Postives = 227/261 (86.97%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMKRVLMLISLMIISHRIPQLAFPV 240
           LQKNIAYGAGNAVEPREP QKLQSEKQAEVQK ++  + V   I   +  H+ P+     
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADI---VNDHQSPKYPSSP 240

Query: 241 SKDNRTGSSPRRAPFEFKQNN 262
           S+  +T    R        +N
Sbjct: 241 SQSAKTIEQDRHLEEHLSNSN 258

BLAST of Carg28014 vs. NCBI nr
Match: XP_038877232.1 (nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877234.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877235.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-97
Identity = 194/218 (88.99%), Postives = 204/218 (93.58%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIE+QH+K
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEDQHRK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           AL EDPSVFDYDGVYD+MKEKAV PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDQMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMK 219
           LQKNIAYGA NA+EPREP  KL SEKQ +  +   S K
Sbjct: 181 LQKNIAYGARNAIEPREPPNKLLSEKQEKQTEVHISEK 218

BLAST of Carg28014 vs. ExPASy Swiss-Prot
Match: Q2KIC0 (Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-24
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = 0

Query: 3   KYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDD---VEREISRQASKNKALKDIEEQHK 62
           +YGL L  K   Q+ H     P+  G   DDDDD   V   + R+A+K +A+K  + + +
Sbjct: 7   QYGLILPKK--AQQLHPVLQKPSVFGNDSDDDDDETSVSESLQREAAKKQAMKQTKLEIQ 66

Query: 63  KALAEDPSVFDYDGVYDEM--KEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYE 122
           KALAED +V++YD +YDEM  K++   P+    ++RKPKYI NL+K  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 123 RKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDF 182
           +K+ +ER  +   +  K+ FVTSAYKKKL E+A+  E ER     E + DVTK+ D+S F
Sbjct: 127 KKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGF 186

Query: 183 YFNLQKNIAYGAGNAVEPREPLQKLQSEKQAEVQK 213
           Y +L   +    G    P    ++ +SE + E  K
Sbjct: 187 YRHL---LNQAVGEEEVPTCSFREARSEIKEEKSK 216

BLAST of Carg28014 vs. ExPASy Swiss-Prot
Match: Q9H0G5 (Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-23
Identity = 77/185 (41.62%), Postives = 114/185 (61.62%), Query Frame = 0

Query: 3   KYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREIS----RQASKNKALKDIEEQH 62
           +YGL L     ++ Q   P L  P  F +D DDD E  +S    R+A+K +A+K  + + 
Sbjct: 7   QYGLIL----PKKTQQLHPVLQKPSVFGNDSDDDDETSVSESLQREAAKKQAMKQTKLEI 66

Query: 63  KKALAEDPSVFDYDGVYDEMKEKAV--LPRAYDREERKPKYIQNLMKKAKEREREQEVIY 122
           +KALAED +V++YD +YDEM++K     P+    ++RKPKYI NL+K  + R++EQE   
Sbjct: 67  QKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRM 126

Query: 123 ERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISD 182
           E+K+ +ER  +   +  K+ FVTSAYKKKL E+A+  E E+     E   DVTK+ D+S 
Sbjct: 127 EKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACLDVTKQKDLSG 186

BLAST of Carg28014 vs. ExPASy Swiss-Prot
Match: Q5NCR9 (Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.7e-23
Identity = 76/182 (41.76%), Postives = 112/182 (61.54%), Query Frame = 0

Query: 3   KYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDD-DVEREISRQASKNKALKDIEEQHKKA 62
           +YGL L  K   Q  H     P+  G   DDD+  V   + R+A+K +A+K  + + +KA
Sbjct: 7   QYGLILPKK--TQPLHRVLQKPSVFGSDSDDDETSVSESLQREAAKKQAMKQTKLEIQKA 66

Query: 63  LAEDPSVFDYDGVYDEMKEKAV--LPRAYDREERKPKYIQNLMKKAKEREREQEVIYERK 122
           LAED +V++YD VYDEM++K     P+    ++RKPKYI NL+K  + R++EQE   E+K
Sbjct: 67  LAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRMEKK 126

Query: 123 LAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYF 182
           + +ER  ++  +  K+ FVTSAYKKKL E+A+  E E+     E   DVTK+ D+S FY 
Sbjct: 127 IQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGFYR 186

BLAST of Carg28014 vs. ExPASy Swiss-Prot
Match: Q4FZU3 (Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 74/184 (40.22%), Postives = 113/184 (61.41%), Query Frame = 0

Query: 3   KYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDD---VEREISRQASKNKALKDIEEQHK 62
           +YGL L     ++ Q     L  P  F +D DDD   V   + R+A+K +A++  + + +
Sbjct: 7   QYGLIL----PKKTQPLNRVLQKPSVFGNDSDDDEASVSESLQREAAKKQAMRQTKLEIQ 66

Query: 63  KALAEDPSVFDYDGVYDEMKEKAV--LPRAYDREERKPKYIQNLMKKAKEREREQEVIYE 122
           KALAED +V++YD +YDEM++K     P+    ++RKPKYI NL+K  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 123 RKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDF 182
           +K+ +ER  +   +  K+ FVTSAYKKKL E+A+  E E+     E + DVTK+ D+S F
Sbjct: 127 KKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEARLDVTKQKDLSGF 186

BLAST of Carg28014 vs. ExPASy Swiss-Prot
Match: Q568R1 (Nuclear speckle splicing regulatory protein 1 OS=Danio rerio OX=7955 GN=nsrp1 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.6e-20
Identity = 67/182 (36.81%), Postives = 107/182 (58.79%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDD--VEREISRQASKNKALKDIEEQH 60
           M+  G Q  +   Q++     PL  P  F DD DD+  V   + ++A K K +K    + 
Sbjct: 1   MATSGKQYGLILPQKRASKSAPLARPSVFGDDSDDETSVGESLQKEAIKKKMMKQTRLEM 60

Query: 61  KKALAEDPSVFDYDGVYDEMKEKAV--LPRAYDREERKPKYIQNLMKKAKEREREQEVIY 120
           +KAL ED +V++YD VYD+++++ +    +    E++KPKYI  L++  +ER++EQE   
Sbjct: 61  QKALEEDSTVYEYDNVYDDIQKQRLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRD 120

Query: 121 ERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISD 179
           ERK+ KER  +   +A K+ FVTSAY++KL E+ + +E E+     E   DV K+ D+S 
Sbjct: 121 ERKIQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSG 180

BLAST of Carg28014 vs. ExPASy TrEMBL
Match: A0A6J1EHK7 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434242 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.6e-107
Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEE 216
           LQKNIAYGAGNAVEPREP QKLQSEKQAEVQK ++
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKK 215

BLAST of Carg28014 vs. ExPASy TrEMBL
Match: A0A6J1I6R6 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471664 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.3e-106
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEE 216
           LQKNIAYGAGNAVEPREP QKLQSEKQA+VQK ++
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQADVQKMKK 215

BLAST of Carg28014 vs. ExPASy TrEMBL
Match: A0A0A0LJE9 (DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.5e-96
Identity = 195/222 (87.84%), Postives = 204/222 (91.89%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ TRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           AL EDPSVFDYDGVYDEMKEK V PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQ---SEKQAEV---QKFEES 217
           LQKN+AYGA NA+EP  P +KLQ    EKQ EV   +K EES
Sbjct: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEES 222

BLAST of Carg28014 vs. ExPASy TrEMBL
Match: A0A1S4E1R3 (nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.8e-96
Identity = 195/222 (87.84%), Postives = 205/222 (92.34%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ  RPPLPAPLGFQDDDDD+VEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNIAYGAGNAVEPREPLQKLQ---SEKQAEV---QKFEES 217
           LQKN+AYGA NA+EPR   +KLQ    EKQ EV   +K EES
Sbjct: 181 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEES 222

BLAST of Carg28014 vs. ExPASy TrEMBL
Match: A0A1S3BQM2 (nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.8e-96
Identity = 195/222 (87.84%), Postives = 205/222 (92.34%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQ  RPPLPAPLGFQDDDDD+VEREISRQASKNKALKDIEEQHKK
Sbjct: 13  MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 72

Query: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 73  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 132

Query: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 133 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 192

Query: 181 LQKNIAYGAGNAVEPREPLQKLQ---SEKQAEV---QKFEES 217
           LQKN+AYGA NA+EPR   +KLQ    EKQ EV   +K EES
Sbjct: 193 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEES 234

BLAST of Carg28014 vs. TAIR 10
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 142/219 (64.84%), Postives = 177/219 (80.82%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQ-HTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 60
           M KYGLQ+R  PSQ+KQ  +RPPL     F +++D DVE+EISRQA+K KA K+IEEQHK
Sbjct: 1   MKKYGLQIRA-PSQKKQSSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHK 60

Query: 61  KALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERK 120
           KAL EDPS F YD VYD+MK+KAVLPR  DREERKP+YIQNLMK+A+ RE+E E++YERK
Sbjct: 61  KALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIVYERK 120

Query: 121 LAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYF 180
           LAKER KD+HL++ K+KFVT AYK+KL EQ KW+ EERLR+LREE+DDVTKK D+SDFYF
Sbjct: 121 LAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYF 180

Query: 181 NLQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMK 219
           N+ KN+A+GA   VE +E  +KL+ +++AE  K EE  K
Sbjct: 181 NIGKNVAFGA-REVEAKE-AEKLEEQRKAE--KLEEQRK 214

BLAST of Carg28014 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 231.9 bits (590), Expect = 6.0e-61
Identity = 128/222 (57.66%), Postives = 175/222 (78.83%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPL--PAPLGFQDDDDDDVEREISRQASKNKALKDIEEQH 60
           + KYGLQ+R  PSQ+KQ +  PL   A +  +DD+++DVE+EISRQASK K+LK IE+QH
Sbjct: 142 IKKYGLQIRA-PSQKKQSSSRPLLRTASIFGEDDEENDVEKEISRQASKTKSLKKIEKQH 201

Query: 61  KKALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYER 120
           KKA+ EDPS F YD VYD++K +A LPR  DREE K +YIQ++MK+A+ RE+E E++YER
Sbjct: 202 KKAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREKEHEIVYER 261

Query: 121 KLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFY 180
           KLAKER+KD+HLY+ K+KFVT  +K+KL EQ KW+EEERLR+LREE+DDVTKK+D+S+FY
Sbjct: 262 KLAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTKKNDLSEFY 321

Query: 181 FNLQKNIAYGAGNAVEPREP--LQKLQSEKQAEVQKFEESMK 219
            N+ KN+A+GA + +E RE   L++L+   + E  + EE+ K
Sbjct: 322 INIGKNVAFGARD-IEAREAGRLKELRKVDRLEELRKEETRK 361

BLAST of Carg28014 vs. TAIR 10
Match: AT1G55928.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51
Identity = 114/220 (51.82%), Postives = 162/220 (73.64%), Query Frame = 0

Query: 1   MSKYGLQLRVKPSQQKQHTRPPLP-APLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 60
           M+K+GLQLR      K  ++  LP AP+  +D++D+DV++EISRQASK K+LK  EEQHK
Sbjct: 12  MNKFGLQLR------KTLSKKVLPIAPILGEDEEDNDVDKEISRQASKTKSLKKFEEQHK 71

Query: 61  KALAEDPSVFDYDGVYDEMKEKAVLPRAYDREE-RKPKYIQNLMKKAKEREREQEVIYER 120
           KAL EDP  F YD VYD+ K++A LPR ++R+E  KP Y Q + +KA  R++E+E++YER
Sbjct: 72  KALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNKPIYNQLMKEKADRRQKEREIVYER 131

Query: 121 KLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFY 180
           KLAKER+K+ HL+  + K VT +YK+KL E+ +W+ EERLR+L EEKDDVTKK D+SDFY
Sbjct: 132 KLAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSEERLRELGEEKDDVTKKKDLSDFY 191

Query: 181 FNLQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKFEESMK 219
           FN+ KN+A+GA + ++ RE  +  +  K  ++++  E MK
Sbjct: 192 FNIGKNVAFGARD-IKARETERLKEQRKVPKLEELREKMK 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019348.12.2e-137100.00Nuclear speckle splicing regulatory protein 1 [Cucurbita argyrosperma subsp. arg... [more]
XP_022927406.11.2e-10697.67nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_0229... [more]
XP_022973152.12.6e-10697.21nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973... [more]
XP_023520694.13.4e-10683.52nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_038877232.11.3e-9788.99nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_03887... [more]
Match NameE-valueIdentityDescription
Q2KIC05.7e-2439.07Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=... [more]
Q9H0G52.8e-2341.62Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 P... [more]
Q5NCR93.7e-2341.76Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 ... [more]
Q4FZU33.1e-2240.22Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=N... [more]
Q568R16.6e-2036.81Nuclear speckle splicing regulatory protein 1 OS=Danio rerio OX=7955 GN=nsrp1 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1EHK75.6e-10797.67nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1I6R61.3e-10697.21nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 G... [more]
A0A0A0LJE91.5e-9687.84DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=... [more]
A0A1S4E1R35.8e-9687.84nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX... [more]
A0A1S3BQM25.8e-9687.84nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX... [more]
Match NameE-valueIdentityDescription
AT2G27285.11.7e-6864.84Coiled-coil domain-containing protein 55 (DUF2040) [more]
AT2G27280.16.0e-6157.66Coiled-coil domain-containing protein 55 (DUF2040) [more]
AT1G55928.12.5e-5151.82Coiled-coil domain-containing protein 55 (DUF2040) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableCOILSCoilCoilcoord: 144..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..263
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 1..216
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL PROTEIN (DUF2040)-RELATEDcoord: 1..216
IPR018612Domain of unknown function DUF2040PFAMPF09745DUF2040coord: 55..171
e-value: 2.1E-38
score: 131.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28014-RACarg28014-RAmRNA