Carg28010 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28010
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nuclear transport factor 2 family protein
Location	Carg_Chr17: 2773854 .. 2775609 (-)
RNA-Seq Expression	Carg28010
Synteny	Carg28010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCAGCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCGAACCATCCATGTTTGTAAATTGCAATGGCGACGATTTTCCCTTTTCAATCTCGTACATCTCTTCAAACATCTCTCAACGTCATTCGACCTAATCGCCCTCTCAAGATCTGCACAATCCGGTGTCAAGGGGACAATCCCGCTACCGATTCGCCGAAGAAGCGAGAATCTAAGCCCGAGAATGCGGTGCTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCTCAAGAGCTCACGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCATACTTCGTCACAGGTTTGGGAAATTTTTGTTTATGCGAGAGCTTACGATTGTGCTTTGGTTTTGTCTCTGAATGTTTGGAAGTTCTAGAGTTCTAGGGTTCTTTGAAATGAAGATAGTTTGTTTTCTTCAATTCAAGTTGTTCTTACCATAAGCACTAAGTTGAAACTAAATCTAAACCATAAATACTCAAATTATCGGAATTATATTGAAATTTTTTAAGATCATAGAGATTAAATTCAAATTTTATCCAAACCATGGAAGCTAAATTTGTAATTTAGCATAAGTAATGATTTTCATCCTCAATATTGTTGTCCTTAACTGTGTAATAGATGAACATATGTATATTACACTGCTAACGTGGGTATATAAGGAACAATGAAGTAGGTGAATTATAGAGTAGGTTGATATTAGATGACATTATAAAAGTTTTGAATACGACGAGAAACTACTAGGCACAAAATCGAAAGTTTAGGGATTGAATAAACATTTATTTTAATTTAGGGACTTGTTAGACACAAAATTAAGAGTTCGGGGTCTGTTAACATTTATAAATTTAAAGATTTTTAGACACGAGCGACTAAATTTTGTAATTCAACTGACCTCTTCAAAGTAAGAGAATGAGTATCCCATGAGGGGCAGACTCGTTGGCAAGGGCTTGGTGTCTCTTGGATACACTAGTTTAGAGGTCCCAAGTCCGATCCTTTGGGTGAGCTTAATACCAAATACCCTCAATGTCTTACGGGTTCGGGCCTTGGGGAGGGTGCAGGTGCCCCCAAATATAGGGATAAAAGCTCCGACTCCCAATCAAATAAAAGTAAAGTTGAAGAACATAACATTCAAAAATACTAATTCAATGAATAAAAAAGTTAGAAAAGATTGCATAAAGAATCTAATTAGCAAAATAATGAAGTGTATGTGTTCATTTATATTAACTTTGGCTGACTAATTGTAGAACTTGTGAGTAGTTTTTCCAAGTTTTGTTCATTTGTATTTGGTGATGATCAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGTGAGCTCAGTCTATAGAGATTACTGTTTTTTGTTTACTAAGCTTAGTGTTGAATTGTTGGTTGATTGGATTGAGTACAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGGTATGTTTAATTTATGA

mRNA sequence

ATTTTCAGCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCGAACCATCCATGTTTGTAAATTGCAATGGCGACGATTTTCCCTTTTCAATCTCGTACATCTCTTCAAACATCTCTCAACGTCATTCGACCTAATCGCCCTCTCAAGATCTGCACAATCCGGTGTCAAGGGGACAATCCCGCTACCGATTCGCCGAAGAAGCGAGAATCTAAGCCCGAGAATGCGGTGCTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCTCAAGAGCTCACGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCATACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGGTATGTTTAATTTATGA

Coding sequence (CDS)

ATGGCGACGATTTTCCCTTTTCAATCTCGTACATCTCTTCAAACATCTCTCAACGTCATTCGACCTAATCGCCCTCTCAAGATCTGCACAATCCGGTGTCAAGGGGACAATCCCGCTACCGATTCGCCGAAGAAGCGAGAATCTAAGCCCGAGAATGCGGTGCTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCTCAAGAGCTCACGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCATACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGGTATGTTTAATTTATGA

Protein sequence

MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSGMFNL

Homology

[Close]

BLAST of Carg28010 vs. NCBI nr
Match: KAG7013759.1 (hypothetical protein SDJN02_23926 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSGMFNL 195
           SFPWRPILSGMFNL
Sbjct: 181 SFPWRPILSGMFNL 194

[Close]

BLAST of Carg28010 vs. NCBI nr
Match: KAG6575195.1 (hypothetical protein SDJN03_25834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.6 bits (1002), Expect = 8.0e-105
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDK NMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKLNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. NCBI nr
Match: XP_023547468.1 (uncharacterized protein LOC111806404 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLN IRPNRPLKICTIRCQGDNPATDSPK +ESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICTIRCQGDNPATDSPKNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. NCBI nr
Match: XP_023006651.1 (uncharacterized protein LOC111499312 [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSL+TSLN IRPNRPLKICTIRCQGDNPATDSPK RESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLRTSLNAIRPNRPLKICTIRCQGDNPATDSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWVDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. NCBI nr
Match: XP_022959200.1 (uncharacterized protein LOC111460260 [Cucurbita moschata])

HSP 1 Score: 380.9 bits (977), Expect = 6.3e-102
Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLN IRPNRPLKIC IRCQG+NPAT SPK RESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. ExPASy TrEMBL
Match: A0A6J1KYC4 (uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.6e-103
Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSL+TSLN IRPNRPLKICTIRCQGDNPATDSPK RESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLRTSLNAIRPNRPLKICTIRCQGDNPATDSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWVDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. ExPASy TrEMBL
Match: A0A6J1H5M4 (uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC111460260 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLN IRPNRPLKIC IRCQG+NPAT SPK RESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. ExPASy TrEMBL
Match: A0A5D3BY85 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001340 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 162/189 (85.71%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATI  FQ  +SLQTSL  IRPN  L+IC I C+G+NP TDSP  +ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHCRGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPP+DV+TPVRAQELT DVSGAI RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASFLRPPSDVQTPVRAQELTTDVSGAIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. ExPASy TrEMBL
Match: A0A1S3C8H3 (uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 162/189 (85.71%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATI  FQ  +SLQTSL  IRPN  L+IC I C+G+NP TDSP  +ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHCRGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPP+DV+TPVRAQELT DVSGAI RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASFLRPPSDVQTPVRAQELTTDVSGAIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. ExPASy TrEMBL
Match: A0A0A0K7I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006760 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.3e-88
Identity = 158/189 (83.60%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWY 60
           MATI  FQ  +SL TSLN IRPN  L+IC I CQG+NP TDSP  +ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQPHSSLHTSLNSIRPNPSLRICRIHCQGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAAS+LRPP DV+TP+RAQELT DVSG+I RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASYLRPPLDVQTPLRAQELTTDVSGSIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           +AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWE FEDKGIGHWKFSCIL
Sbjct: 121 QAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILS 190
           SFPWRPILS
Sbjct: 181 SFPWRPILS 189

[Close]

BLAST of Carg28010 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-61
Identity = 106/172 (61.63%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 18  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTD 77
           ++ R NR  +   + C+G NP  +    +  +P+N +LK+AWYGSELLGIAAS  R P +
Sbjct: 24  SIFRTNRRFEATGVSCRGQNPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSP-E 83

Query: 78  VETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFK 137
               V   E+  D SG   R  +V++IK+DF+RSYFVTGNLT E YEE+CEFADPAGSFK
Sbjct: 84  TSPIVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFK 143

Query: 138 GLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS 190
           GL+RFKRNCTNFGSL++KSNMKL KWE+FEDKGIGHWKFSC++SFPW+PILS
Sbjct: 144 GLARFKRNCTNFGSLIEKSNMKLMKWENFEDKGIGHWKFSCVMSFPWKPILS 194

[Close]

BLAST of Carg28010 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46
Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 18  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTD 77
           ++ R NR  +   + C+G NP  +    +  +P+N +LK+AWYGSELLGIAAS  R P +
Sbjct: 24  SIFRTNRRFEATGVSCRGQNPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSP-E 83

Query: 78  VETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFK 137
               V   E+  D SG   R  +V++IK+DF+RSYFVTGNLT E YEE+CEFADPAGSFK
Sbjct: 84  TSPIVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFK 143

Query: 138 GLSRFKRNCTNFGSLVDKSNMKLTKWEDFE 168
           GL+RFKRNCTNFGSL++KSNMKL KWE+FE
Sbjct: 144 GLARFKRNCTNFGSLIEKSNMKLMKWENFE 172

[Close]

BLAST of Carg28010 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 29/94 (30.85%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 100 IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMK 159
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 160 LTKWEDFEDKG----IGHWKFSCILSFPWRPILS 190
           L   E  E       +  WK    L  PWRP++S
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLIS 173

[Close]

BLAST of Carg28010 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 29/94 (30.85%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 100 IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMK 159
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 160 LTKWEDFEDKG----IGHWKFSCILSFPWRPILS 190
           L   E  E       +  WK    L  PWRP++S
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLIS 173

The following BLAST results are available for this feature:

BLAST of Carg28010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013759.1	1.2e-108	100.00	hypothetical protein SDJN02_23926 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6575195.1	8.0e-105	99.47	hypothetical protein SDJN03_25834, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023547468.1	2.0e-103	97.88	uncharacterized protein LOC111806404 [Cucurbita pepo subsp. pepo]	[more]
XP_023006651.1	3.4e-103	97.88	uncharacterized protein LOC111499312 [Cucurbita maxima]	[more]
XP_022959200.1	6.3e-102	96.83	uncharacterized protein LOC111460260 [Cucurbita moschata]	[more]

BLAST of Carg28010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg28010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYC4	1.6e-103	97.88	uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312...	[more]
A0A6J1H5M4	3.1e-102	96.83	uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A5D3BY85	1.3e-89	85.71	Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C8H3	1.3e-89	85.71	uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=...	[more]
A0A0A0K7I1	4.3e-88	83.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006760 PE=4 SV=1	[more]

BLAST of Carg28010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46100.1	2.0e-61	61.63	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	1.1e-46	58.00	Nuclear transport factor 2 (NTF2) family protein	[more]
AT3G04890.1	4.7e-10	30.85	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	4.7e-10	30.85	Uncharacterized conserved protein (DUF2358)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 100..187 e-value: 9.4E-7 score: 29.1
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 11..189
None	No IPR available	PANTHER	PTHR34123:SF1	OS04G0578200 PROTEIN	coord: 11..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28010-RA	Carg28010-RA	mRNA