Carg27992 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27992
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF118-like
Location	Carg_Chr15: 4875656 .. 4876531 (-)
RNA-Seq Expression	Carg27992
Synteny	Carg27992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACCAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGCACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCTCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTTCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAACCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCCATCTCTCAAACATCCCCAGCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTCTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTGGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTGGATGAAGCTTTGAATGTTCCTTGCTCATGA

mRNA sequence

ATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACCAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGCACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCTCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTTCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAACCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCCATCTCTCAAACATCCCCAGCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTCTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTGGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTGGATGAAGCTTTGAATGTTCCTTGCTCATGA

Coding sequence (CDS)

ATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACCAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGCACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCTCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTTCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAACCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCCATCTCTCAAACATCCCCAGCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTCTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTGGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTGGATGAAGCTTTGAATGTTCCTTGCTCATGA

Protein sequence

MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQTSPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS

Homology

[Close]

BLAST of Carg27992 vs. NCBI nr
Match: KAG6579194.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016706.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 562.0 bits (1447), Expect = 3.0e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT
Sbjct: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 291

[Close]

BLAST of Carg27992 vs. NCBI nr
Match: XP_022939650.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata])

HSP 1 Score: 562.0 bits (1447), Expect = 3.0e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 207

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 208 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 267

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 268 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. NCBI nr
Match: XP_023549719.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153
Identity = 287/291 (98.63%), Postives = 287/291 (98.63%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDP KG
Sbjct: 88  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPSKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPK NVIISSSSSSSDENEEESGTAISQT
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKANVIISSSSSSSDENEEESGTAISQT 207

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SP AIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 208 SPPAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 267

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYG DEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 268 LLFDDFSGMDDLQIYGFDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. NCBI nr
Match: XP_022994038.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita maxima])

HSP 1 Score: 552.0 bits (1421), Expect = 3.1e-153
Identity = 286/291 (98.28%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEI TKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIETKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVII+SSSSSSDENEEESG+AISQT
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIITSSSSSSDENEEESGSAISQT 207

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SPAAIVEMETSSSVLIKEEE IDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 208 SPAAIVEMETSSSVLIKEEEGIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 267

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYG DEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 268 LLFDDFSGMDDLQIYGFDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. NCBI nr
Match: XP_038886407.1 (ethylene-responsive transcription factor ERF118-like [Benincasa hispida])

HSP 1 Score: 470.7 bits (1210), Expect = 9.1e-129
Identity = 250/296 (84.46%), Postives = 270/296 (91.22%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEI TKS+KLKRIVREIHLPLFPF+ SK+MDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIETKSVKLKRIVREIHLPLFPFR-SKTMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNG KNPE+K+KR L +    KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGGKNPEMKKKRVLAT----KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPK---TNVIISSSSSSSDENEEESGTAI 180
           ARIWLGTYNTAEEASQAYESKRLEFE AMAAAPK   +N+IISSSS SS+ENEEES + +
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFETAMAAAPKSSSSNIIISSSSCSSEENEEESDSVV 207

Query: 181 SQTSPAAIVEMETSSSVLIK--EEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFF 240
           SQTSPAAIVEMETSSSVLIK  EEEVIDT+L+NELQ+P+LGFVDE  EINLGLPELDPFF
Sbjct: 208 SQTSPAAIVEMETSSSVLIKEDEEEVIDTNLINELQMPDLGFVDEGLEINLGLPELDPFF 267

Query: 241 MNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           M+DIG   DDFS +DD+QIYG D+D PSCLPDCDFNDFGND+ISCWVDEALNVPCS
Sbjct: 268 MDDIGQFLDDFSALDDIQIYGFDDDVPSCLPDCDFNDFGNDDISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. ExPASy Swiss-Prot
Match: Q9CA27 (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-29
Identity = 114/302 (37.75%), Postives = 156/302 (51.66%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTS-TQS 62
           RK+R+I NDP ATD SSS++E     K  K+KRIVREI+ P        SM+V+   ++S
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFP--------SMEVSEQPSES 96

Query: 63  SSQDSNNG------SKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIR 122
           SSQDS         S +P + RK+ +                   GVRQRKWGKWAAEIR
Sbjct: 97  SSQDSTKTDGKIAVSASPAVPRKKPV-------------------GVRQRKWGKWAAEIR 156

Query: 123 DPFKGARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGT 182
           DP K  R WLGT++T EEA++AY++K+LEF+  +A     NV  +    SS E  +    
Sbjct: 157 DPIKKTRTWLGTFDTLEEAAKAYDAKKLEFDAIVAG----NVSTTKRDVSSSETSQ---- 216

Query: 183 AISQTSPAAIVEM-ETSSSVLI------------------------KEEEVIDTSLMNEL 242
             S++SP   VE  +TS+S L                          +E + D    N L
Sbjct: 217 -CSRSSPVVPVEQDDTSASALTCVNNPDDVSTVAPTAPTPNVPAGGNKETLFDFDFTN-L 276

Query: 243 QIPNLGFVDEDFEINLGLPELDPFFMNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDF 273
           QIP+ GF+ E+ +      + D F  +D    FDDF  +DD+Q  G +++ PS LPD DF
Sbjct: 277 QIPDFGFLAEEQQD----LDFDCFLADD---QFDDFGLLDDIQ--GFEDNGPSALPDFDF 292

[Close]

BLAST of Carg27992 vs. ExPASy Swiss-Prot
Match: Q9LUA2 (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 GN=ERF119 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 105/278 (37.77%), Postives = 151/278 (54.32%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSS 62
           RK+R + NDP ATD SSSE+E     +S + KR V EI LP     +  +    + +   
Sbjct: 41  RKLRFVVNDPYATDYSSSEEE----ERSQRRKRYVCEIDLPF----AQAATQAESESSYC 100

Query: 63  SQDSNNGSKNPELK--RKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 122
            + +NNG    ++    K+ L SK  P    +  + S+  GVRQRKWGKWAAEIR P   
Sbjct: 101 QESNNNGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITK 160

Query: 123 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 182
            R WLGTY T E+A+ AY +K+LEF+ A+AAA         +S++S     ESG+ IS +
Sbjct: 161 VRTWLGTYETLEQAADAYATKKLEFD-ALAAA---------TSAASSVLSNESGSMISAS 220

Query: 183 SPAAIVEMETSSSVLIKEEEVIDTSLMN----ELQIPNLG-FVDEDFEINLGLPELDPFF 242
             +  ++ +   S L ++      +  +    +LQIP +G F+D+ F  N    ELD   
Sbjct: 221 GSSIDLDKKLVDSTLDQQAGESKKASFDFDFADLQIPEMGCFIDDSFIPN--ACELDFLL 280

Query: 243 MND-IGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFND 273
             +    + DD+ G+DDL I GL+ D PS LPD DF+D
Sbjct: 281 TEENNNQMLDDYCGIDDLDIIGLECDGPSELPDYDFSD 298

[Close]

BLAST of Carg27992 vs. ExPASy Swiss-Prot
Match: Q8GW17 (Ethylene-responsive transcription factor ERF116 OS=Arabidopsis thaliana OX=3702 GN=ERF116 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 90/285 (31.58%), Postives = 137/285 (48.07%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREI-HLPLFPFQSSKSMDVTTST 60
           + R +R++  DPDATD SSS  + E   K  K+KR V EI  LP                
Sbjct: 12  LLRTVRIVFTDPDATDDSSSSSD-EWLPKPRKVKRFVHEITFLP--------------QV 71

Query: 61  QSSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYR---GVRQRKWGKWAAEIRD 120
             SSQD +N  K P                   R+S  Q++   GVR R  GK+AAEI +
Sbjct: 72  SESSQDRSNAVKTPR------------------RKSTRQFKYPVGVRPRPSGKFAAEILN 131

Query: 121 PFKGARIWLGTYNTAEEASQAYESKRLEFE---NAMAAAPKTNVIISSSSSSSDENEEES 180
           PF   + WLGTY T  EA +AY  K++E++   ++ +A   + V ++S    S  +   S
Sbjct: 132 PFTKTKKWLGTYETPAEAEKAYVDKKVEYDALASSGSAVSSSVVTVTSQCLRSPTSASVS 191

Query: 181 GTAISQTS-PAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFV--DEDFEI-NLGLP 240
             +    S     +  + ++S     +EV  T   ++++IP+L F+  +ED  + N    
Sbjct: 192 CVSADDLSKEKTSLNKDVAASGDSTTKEVFTTFDFSDVKIPDLRFLAAEEDSMVSNANGA 251

Query: 241 ELD-PFFMNDIGLLFDDFSGMD-DLQIYGLDEDEPSCLPDCDFND 273
           ELD   F+ D  +L DD+S ++ D+     +   PS LPDCDF +
Sbjct: 252 ELDFDCFLTDSNILLDDYSLLENDINFSRFENSLPSELPDCDFTE 263

[Close]

BLAST of Carg27992 vs. ExPASy Swiss-Prot
Match: Q9FK12 (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15
Identity = 91/291 (31.27%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSS 62
           +K+ +   DPDATDSSS EDE +      ++KR V EI +   P  ++    V+   +  
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVE--PSCNNVVTGVSMKDRKR 96

Query: 63  SQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 122
              S++ +++P   R+R          +S      ++RGVRQR WGKWAAEIRDP +  R
Sbjct: 97  LSSSSDETQSPASSRQR------PNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRR 156

Query: 123 IWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQTSP 182
           IWLGT+ TAEEA+  Y++  +      A    TN    S     +E EEE    I +   
Sbjct: 157 IWLGTFETAEEAAVVYDNAAIRLRGPDAL---TNF---SIPPQEEEEEEEPEPVIEEKPV 216

Query: 183 AAIVEMETSSSVLIKEEEV----IDTSLMN----ELQIPNLGFVDEDFE----------- 242
                  T+SS    EE++      TS++N    E+Q     F     E           
Sbjct: 217 IMTTPTPTTSSSESTEEDLQHLSSPTSVLNHRSEEIQQVQQPFKSAKPEPGVSNAPWWHT 276

Query: 243 -INLGLPELDPFFMNDIGLLFDDFS-GMDDLQIYGLDEDEPSCLPDCDFND 273
             N GL E D  F  D   L + F+    ++ I+    D+  C  D  FND
Sbjct: 277 GFNTGLGESDDSFPLDTPFLDNYFNESPPEMSIFDQPMDQIFCENDDIFND 313

[Close]

BLAST of Carg27992 vs. ExPASy Swiss-Prot
Match: Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 80/244 (32.79%), Postives = 112/244 (45.90%), Query Frame = 0


Query: 2   TRKIRVICNDPDATDSSSSEDEGE---IGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTS 61
           TR +R+   DPDATDSSS ++E E     +K  ++K+ V E++L            VT S
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYL-------DSGAVVTGS 93

Query: 62  TQSSSQDSNNGSKNPELKRKRGLGSKT----MPKTLSTRRSASQYRGVRQRKWGKWAAEI 121
                     G    + ++KR + S++    +    +T     ++RGVRQR WGKWAAEI
Sbjct: 94  C---------GQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEI 153

Query: 122 RDPFKGARIWLGTYNTAEEASQAYESKRLEFENAMA---------------AAP------ 181
           RDP K  R+WLGTYNTAEEA+  Y++  ++     A               A P      
Sbjct: 154 RDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKK 213

Query: 182 --------KTNVIISSSSSSSDENEEESGTAISQTSPAAIVEMETSSS-----VLIKEEE 205
                   K +V  SSS S S  N+          SP A+ E    SS     V++KEE 
Sbjct: 214 KKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEP 261

[Close]

BLAST of Carg27992 vs. ExPASy TrEMBL
Match: A0A6J1FNB7 (ethylene-responsive transcription factor ERF118-like OS=Cucurbita moschata OX=3662 GN=LOC111445481 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 207

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 208 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 267

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 268 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. ExPASy TrEMBL
Match: A0A6J1K412 (ethylene-responsive transcription factor ERF118-like OS=Cucurbita maxima OX=3661 GN=LOC111489847 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 286/291 (98.28%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGEI TKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEIETKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 180
           ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVII+SSSSSSDENEEESG+AISQT
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIITSSSSSSDENEEESGSAISQT 207

Query: 181 SPAAIVEMETSSSVLIKEEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 240
           SPAAIVEMETSSSVLIKEEE IDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG
Sbjct: 208 SPAAIVEMETSSSVLIKEEEGIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFFMNDIG 267

Query: 241 LLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           LLFDDFSGMDDLQIYG DEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS
Sbjct: 268 LLFDDFSGMDDLQIYGFDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. ExPASy TrEMBL
Match: A0A5D3D0D0 (Ethylene-responsive transcription factor ERF118 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00090 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126
Identity = 246/296 (83.11%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGE+ TKSLKLKRIVREIHLPLFP  SSKSMDVTTST 
Sbjct: 1   MTRKIRVICNDPDATDSSSSEDEGEVQTKSLKLKRIVREIHLPLFPSHSSKSMDVTTSTP 60

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNG KN ELK+KR LG+    KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 61  SSSQDSNNGGKNLELKKKRVLGT----KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPK--TNVIISSSSSSSDENEEESGTAIS 180
           ARIWLGTYNTAEEASQAYESKRLEFE AMAAAPK  +N++I+SSSSSS+ENEEES + +S
Sbjct: 121 ARIWLGTYNTAEEASQAYESKRLEFETAMAAAPKSSSNIVITSSSSSSEENEEESDSVVS 180

Query: 181 QTSP-AAIVEMETSSSVLIK--EEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFF 240
           QT P AAI+EMETSSS LIK  EEEVIDT+L+NELQ+P+LGFVDE  EINLGLPELD FF
Sbjct: 181 QTFPAAAIIEMETSSSALIKEDEEEVIDTNLINELQVPDLGFVDEGMEINLGLPELDQFF 240

Query: 241 MNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           M+DIG   DDFS MDD+QIYG D+D PSCLPDCDF+DFGND+ISCWVDEALNVPCS
Sbjct: 241 MDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDDISCWVDEALNVPCS 292

[Close]

BLAST of Carg27992 vs. ExPASy TrEMBL
Match: A0A1S3BD92 (ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC103488620 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126
Identity = 246/296 (83.11%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           MTRKIRVICNDPDATDSSSSEDEGE+ TKSLKLKRIVREIHLPLFP  SSKSMDVTTST 
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEVQTKSLKLKRIVREIHLPLFPSHSSKSMDVTTSTP 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNG KN ELK+KR LG+    KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGGKNLELKKKRVLGT----KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPK--TNVIISSSSSSSDENEEESGTAIS 180
           ARIWLGTYNTAEEASQAYESKRLEFE AMAAAPK  +N++I+SSSSSS+ENEEES + +S
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFETAMAAAPKSSSNIVITSSSSSSEENEEESDSVVS 207

Query: 181 QTSP-AAIVEMETSSSVLIK--EEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFF 240
           QT P AAI+EMETSSS LIK  EEEVIDT+L+NELQ+P+LGFVDE  EINLGLPELD FF
Sbjct: 208 QTFPAAAIIEMETSSSALIKEDEEEVIDTNLINELQVPDLGFVDEGMEINLGLPELDQFF 267

Query: 241 MNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           M+DIG   DDFS MDD+QIYG D+D PSCLPDCDF+DFGND+ISCWVDEALNVPCS
Sbjct: 268 MDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDDISCWVDEALNVPCS 319

[Close]

BLAST of Carg27992 vs. ExPASy TrEMBL
Match: A0A0A0K880 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G039270 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125
Identity = 243/296 (82.09%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 1   MTRKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQ 60
           M+RKIRVICNDPDATDSSSSEDEGEI TK LKLKRIVREIHLP FPF  SKSMDVTTST 
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPFPFHPSKSMDVTTSTP 87

Query: 61  SSSQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 120
           SSSQDSNNG KN ELK+KR      + KTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG
Sbjct: 88  SSSQDSNNGGKNQELKKKR-----VLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 147

Query: 121 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKT--NVIISSSSSSSDENEEESGTAIS 180
           ARIWLGTYNTAEEASQAYESKRLEFE+A+AAAPK+  N++I+SSSSSS+ENEEES + +S
Sbjct: 148 ARIWLGTYNTAEEASQAYESKRLEFESALAAAPKSSNNIVITSSSSSSEENEEESDSVVS 207

Query: 181 QTSP-AAIVEMETSSSVLIK--EEEVIDTSLMNELQIPNLGFVDEDFEINLGLPELDPFF 240
           QTSP AAI+EMETSSSVLIK  EEE+IDT+L+NELQ+P+LGFVDE  EINLGLPELDPFF
Sbjct: 208 QTSPAAAILEMETSSSVLIKEDEEEMIDTNLINELQVPDLGFVDEGMEINLGLPELDPFF 267

Query: 241 MNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFNDFGNDEISCWVDEALNVPCS 292
           M+DIG   DDFS MDD+QIYG D+D PSCLPDCDF+DFGND+ISCWVDEALNVPCS
Sbjct: 268 MDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDDISCWVDEALNVPCS 318

[Close]

BLAST of Carg27992 vs. TAIR 10
Match: AT1G68550.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 7.2e-31
Identity = 114/302 (37.75%), Postives = 156/302 (51.66%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTS-TQS 62
           RK+R+I NDP ATD SSS++E     K  K+KRIVREI+ P        SM+V+   ++S
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFP--------SMEVSEQPSES 96

Query: 63  SSQDSNNG------SKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIR 122
           SSQDS         S +P + RK+ +                   GVRQRKWGKWAAEIR
Sbjct: 97  SSQDSTKTDGKIAVSASPAVPRKKPV-------------------GVRQRKWGKWAAEIR 156

Query: 123 DPFKGARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGT 182
           DP K  R WLGT++T EEA++AY++K+LEF+  +A     NV  +    SS E  +    
Sbjct: 157 DPIKKTRTWLGTFDTLEEAAKAYDAKKLEFDAIVAG----NVSTTKRDVSSSETSQ---- 216

Query: 183 AISQTSPAAIVEM-ETSSSVLI------------------------KEEEVIDTSLMNEL 242
             S++SP   VE  +TS+S L                          +E + D    N L
Sbjct: 217 -CSRSSPVVPVEQDDTSASALTCVNNPDDVSTVAPTAPTPNVPAGGNKETLFDFDFTN-L 276

Query: 243 QIPNLGFVDEDFEINLGLPELDPFFMNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDF 273
           QIP+ GF+ E+ +      + D F  +D    FDDF  +DD+Q  G +++ PS LPD DF
Sbjct: 277 QIPDFGFLAEEQQD----LDFDCFLADD---QFDDFGLLDDIQ--GFEDNGPSALPDFDF 292

[Close]

BLAST of Carg27992 vs. TAIR 10
Match: AT1G68550.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 7.2e-31
Identity = 114/302 (37.75%), Postives = 156/302 (51.66%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTS-TQS 62
           RK+R+I NDP ATD SSS++E     K  K+KRIVREI+ P        SM+V+   ++S
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFP--------SMEVSEQPSES 96

Query: 63  SSQDSNNG------SKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIR 122
           SSQDS         S +P + RK+ +                   GVRQRKWGKWAAEIR
Sbjct: 97  SSQDSTKTDGKIAVSASPAVPRKKPV-------------------GVRQRKWGKWAAEIR 156

Query: 123 DPFKGARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGT 182
           DP K  R WLGT++T EEA++AY++K+LEF+  +A     NV  +    SS E  +    
Sbjct: 157 DPIKKTRTWLGTFDTLEEAAKAYDAKKLEFDAIVAG----NVSTTKRDVSSSETSQ---- 216

Query: 183 AISQTSPAAIVEM-ETSSSVLI------------------------KEEEVIDTSLMNEL 242
             S++SP   VE  +TS+S L                          +E + D    N L
Sbjct: 217 -CSRSSPVVPVEQDDTSASALTCVNNPDDVSTVAPTAPTPNVPAGGNKETLFDFDFTN-L 276

Query: 243 QIPNLGFVDEDFEINLGLPELDPFFMNDIGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDF 273
           QIP+ GF+ E+ +      + D F  +D    FDDF  +DD+Q  G +++ PS LPD DF
Sbjct: 277 QIPDFGFLAEEQQD----LDFDCFLADD---QFDDFGLLDDIQ--GFEDNGPSALPDFDF 292

[Close]

BLAST of Carg27992 vs. TAIR 10
Match: AT3G25890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 105/278 (37.77%), Postives = 151/278 (54.32%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSS 62
           RK+R + NDP ATD SSSE+E     +S + KR V EI LP     +  +    + +   
Sbjct: 41  RKLRFVVNDPYATDYSSSEEE----ERSQRRKRYVCEIDLPF----AQAATQAESESSYC 100

Query: 63  SQDSNNGSKNPELK--RKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 122
            + +NNG    ++    K+ L SK  P    +  + S+  GVRQRKWGKWAAEIR P   
Sbjct: 101 QESNNNGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITK 160

Query: 123 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 182
            R WLGTY T E+A+ AY +K+LEF+ A+AAA         +S++S     ESG+ IS +
Sbjct: 161 VRTWLGTYETLEQAADAYATKKLEFD-ALAAA---------TSAASSVLSNESGSMISAS 220

Query: 183 SPAAIVEMETSSSVLIKEEEVIDTSLMN----ELQIPNLG-FVDEDFEINLGLPELDPFF 242
             +  ++ +   S L ++      +  +    +LQIP +G F+D+ F  N    ELD   
Sbjct: 221 GSSIDLDKKLVDSTLDQQAGESKKASFDFDFADLQIPEMGCFIDDSFIPN--ACELDFLL 280

Query: 243 MND-IGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFND 273
             +    + DD+ G+DDL I GL+ D PS LPD DF+D
Sbjct: 281 TEENNNQMLDDYCGIDDLDIIGLECDGPSELPDYDFSD 298

[Close]

BLAST of Carg27992 vs. TAIR 10
Match: AT3G25890.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 105/278 (37.77%), Postives = 151/278 (54.32%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSS 62
           RK+R + NDP ATD SSSE+E     +S + KR V EI LP     +  +    + +   
Sbjct: 41  RKLRFVVNDPYATDYSSSEEE----ERSQRRKRYVCEIDLPF----AQAATQAESESSYC 100

Query: 63  SQDSNNGSKNPELK--RKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKG 122
            + +NNG    ++    K+ L SK  P    +  + S+  GVRQRKWGKWAAEIR P   
Sbjct: 101 QESNNNGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITK 160

Query: 123 ARIWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQT 182
            R WLGTY T E+A+ AY +K+LEF+ A+AAA         +S++S     ESG+ IS +
Sbjct: 161 VRTWLGTYETLEQAADAYATKKLEFD-ALAAA---------TSAASSVLSNESGSMISAS 220

Query: 183 SPAAIVEMETSSSVLIKEEEVIDTSLMN----ELQIPNLG-FVDEDFEINLGLPELDPFF 242
             +  ++ +   S L ++      +  +    +LQIP +G F+D+ F  N    ELD   
Sbjct: 221 GSSIDLDKKLVDSTLDQQAGESKKASFDFDFADLQIPEMGCFIDDSFIPN--ACELDFLL 280

Query: 243 MND-IGLLFDDFSGMDDLQIYGLDEDEPSCLPDCDFND 273
             +    + DD+ G+DDL I GL+ D PS LPD DF+D
Sbjct: 281 TEENNNQMLDDYCGIDDLDIIGLECDGPSELPDYDFSD 298

[Close]

BLAST of Carg27992 vs. TAIR 10
Match: AT5G53290.1 (cytokinin response factor 3 )

HSP 1 Score: 85.5 bits (210), Expect = 7.7e-17
Identity = 91/291 (31.27%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 3   RKIRVICNDPDATDSSSSEDEGEIGTKSLKLKRIVREIHLPLFPFQSSKSMDVTTSTQSS 62
           +K+ +   DPDATDSSS EDE +      ++KR V EI +   P  ++    V+   +  
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVE--PSCNNVVTGVSMKDRKR 96

Query: 63  SQDSNNGSKNPELKRKRGLGSKTMPKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 122
              S++ +++P   R+R          +S      ++RGVRQR WGKWAAEIRDP +  R
Sbjct: 97  LSSSSDETQSPASSRQR------PNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRR 156

Query: 123 IWLGTYNTAEEASQAYESKRLEFENAMAAAPKTNVIISSSSSSSDENEEESGTAISQTSP 182
           IWLGT+ TAEEA+  Y++  +      A    TN    S     +E EEE    I +   
Sbjct: 157 IWLGTFETAEEAAVVYDNAAIRLRGPDAL---TNF---SIPPQEEEEEEEPEPVIEEKPV 216

Query: 183 AAIVEMETSSSVLIKEEEV----IDTSLMN----ELQIPNLGFVDEDFE----------- 242
                  T+SS    EE++      TS++N    E+Q     F     E           
Sbjct: 217 IMTTPTPTTSSSESTEEDLQHLSSPTSVLNHRSEEIQQVQQPFKSAKPEPGVSNAPWWHT 276

Query: 243 -INLGLPELDPFFMNDIGLLFDDFS-GMDDLQIYGLDEDEPSCLPDCDFND 273
             N GL E D  F  D   L + F+    ++ I+    D+  C  D  FND
Sbjct: 277 GFNTGLGESDDSFPLDTPFLDNYFNESPPEMSIFDQPMDQIFCENDDIFND 313

The following BLAST results are available for this feature:

BLAST of Carg27992 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579194.1	3.0e-156	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022939650.1	3.0e-156	100.00	ethylene-responsive transcription factor ERF118-like [Cucurbita moschata]	[more]
XP_023549719.1	1.1e-153	98.63	ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo...	[more]
XP_022994038.1	3.1e-153	98.28	ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]	[more]
XP_038886407.1	9.1e-129	84.46	ethylene-responsive transcription factor ERF118-like [Benincasa hispida]	[more]

BLAST of Carg27992 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA27	1.0e-29	37.75	Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LUA2	1.5e-28	37.77	Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8GW17	2.2e-16	31.58	Ethylene-responsive transcription factor ERF116 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FK12	1.1e-15	31.27	Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SUQ2	1.4e-15	32.79	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg27992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNB7	1.5e-156	100.00	ethylene-responsive transcription factor ERF118-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K412	1.5e-153	98.28	ethylene-responsive transcription factor ERF118-like OS=Cucurbita maxima OX=3661...	[more]
A0A5D3D0D0	3.5e-126	83.11	Ethylene-responsive transcription factor ERF118 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BD92	3.5e-126	83.11	ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K880	1.7e-125	82.09	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G039270 PE=...	[more]

BLAST of Carg27992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68550.1	7.2e-31	37.75	Integrase-type DNA-binding superfamily protein	[more]
AT1G68550.2	7.2e-31	37.75	Integrase-type DNA-binding superfamily protein	[more]
AT3G25890.1	1.0e-29	37.77	Integrase-type DNA-binding superfamily protein	[more]
AT3G25890.2	1.0e-29	37.77	Integrase-type DNA-binding superfamily protein	[more]
AT5G53290.1	7.7e-17	31.27	cytokinin response factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 121..137 score: 59.14 coord: 99..110 score: 72.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 98..164 e-value: 4.5E-19 score: 79.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 98..147 e-value: 4.2E-12 score: 46.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 98..158 score: 20.099274
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 97..145 e-value: 1.88759E-24 score: 91.5643
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 97..156 e-value: 3.9E-18 score: 67.4
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 236..276 e-value: 100.0 score: 0.3 coord: 1..251 e-value: 2.3E-38 score: 130.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..100
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 2..290
None	No IPR available	PANTHER	PTHR31194:SF62	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119	coord: 2..290
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 97..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27992-RA	Carg27992-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity