Carg27924 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27924
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ras-related protein Rab7
Location	Carg_Chr04: 16482379 .. 16483952 (+)
RNA-Seq Expression	Carg27924
Synteny	Carg27924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAGTGCGTGTTCTACTTAAAATCGTTGGCATGTCGATGCTGTGTAGACTGTCGATTTTGGAACTATTATGTACTCATGTTTATGCTAAATCATTGATATTTGCATTGCTAGATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCTTTCTATAGAGGGGCTGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTCGACAATTGGCACGATGAGTTTCTTAGACAGGTGGATCAATTCAGTTCTTAAGTTTTACTCTGTTACTAGGATCTTGTACAGCTGGTGTGAGGAAGAATTCTTTGATTGTTTTGCATTATTATTATTTTCTATATATGAAATCATTTTCCTACTAATGATCGAATACCACCGAAGTTTGTCCAGTCTTGTCCAATAGGATTATACCTCTAGGTTTTTTTTCATGTCATTCTTTGGGAAATAGTTGTACAGTAATGATTCCAGACAAGGGGAAGCAGCTTTTTCATTAGTAGGACGGGTTGCATGTATAGGAACGACTGGTTCAATTAGATTGATCTATTAGTTTAATTTTCTTTTATAATTCTTCATTTTGTTAGATTTATTTATTTTGTTGTTCTGTGATTGTTGTTTAGGTACTTATTTAATTAGCTAGCATATGGTTCCTCTAAAGCTTTGTCTAAAACACCTCTAAAGATCTTTTTGTATTCAAAAAGTACCTTAAGTTGAGGAGCAACTGCCTTCGAGGTCATTTGTGTCTGCCTTGTAGATATTGCTTTGGCTTTTTATTCAGTAGCTTTCTCTATTGCTGGCGTGTGCCCGTTTCTTGAACTTCGCAAGGTTATACCCTGCCTCTTTTTCTTTTTTTTTTCCTTCTCATCTAAGAACTGTTGTTTTATTTGCATTACTCCGCAATTCTTGATTTGTGTCGCTAAGGTAAGATGTTTTTGAAAATTGTGATCGAAATACCGTTGTAGTGGACAATGATATGTCAGAAAAAAGATTTTGCTCACAAAGAGTATTGCAGGCACATGTGCGTTAGACAAATAAAAGAAAGACACTTATGCACCCGTGCTCTCTTGGTTCTCTGCATGTGTTTAGTATGTGTGCTAGTCTGAGTATGTTTTTTTTTATGAGTCTAAATTAGTATTGATCCTATGTCTTTCAGGCAAATCCACCTGACCCTAGGACGTTCCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAATAGTCGAGTGGTAAGGAATAAGGATGTCTGGACCTGGCCAAGTTGAGCTTTGCCTTTTCTTTTCATGTTGACCTGATTATTATTTCTGTAGGTTTCTGAGAAGAAAGCTAGGGAATGGTGTGCATCAAAAGAAAATATTCCGTACTTTGAAACATCAGCTAGAGAAGACTACAACGTCGATGCTGCATTTTTGTGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGAT

mRNA sequence

TACGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCTTTCTATAGAGGGGCTGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTCGACAATTGGCACGATGAGTTTCTTAGACAGGCAAATCCACCTGACCCTAGGACGTTCCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAATAGTCGAGTGGTTTCTGAGAAGAAAGCTAGGGAATGGTGTGCATCAAAAGAAAATATTCCGTACTTTGAAACATCAGCTAGAGAAGACTACAACGTCGATGCTGCATTTTTGTGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGAT

Coding sequence (CDS)

TACGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCTTTCTATAGAGGGGCTGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTCGACAATTGGCACGATGAGTTTCTTAGACAGGCAAATCCACCTGACCCTAGGACGTTCCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAATAGTCGAGTGGTTTCTGAGAAGAAAGCTAGGGAATGGTGTGCATCAAAAGAAAATATTCCGTACTTTGAAACATCAGCTAGAGAAGACTACAACGTCGATGCTGCATTTTTGTGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGAT

Protein sequence

YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD

Homology

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BLAST of Carg27924 vs. NCBI nr
Match: XP_022930211.1 (ras-related protein Rab7-like [Cucurbita moschata] >XP_022974789.1 ras-related protein Rab7-like [Cucurbita maxima] >XP_023536071.1 ras-related protein Rab7-like [Cucurbita pepo subsp. pepo] >KAG6570291.1 hypothetical protein SDJN03_30361, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.6 bits (849), Expect = 3.6e-87
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 184

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BLAST of Carg27924 vs. NCBI nr
Match: KAG7032545.1 (hypothetical protein SDJN02_06594, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 3.6e-87
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD
Sbjct: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 157

[Close]

BLAST of Carg27924 vs. NCBI nr
Match: XP_008447760.1 (PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo] >XP_011658964.1 ras-related protein Rab7 isoform X2 [Cucumis sativus] >KAE8646044.1 hypothetical protein Csa_016247 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 8.0e-87
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 26  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 85

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 86  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 145

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 146 SKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 182

[Close]

BLAST of Carg27924 vs. NCBI nr
Match: XP_004139780.1 (ras-related protein Rab7 isoform X1 [Cucumis sativus] >XP_008447759.1 PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis melo] >XP_022156315.1 ras-related protein Rab7 [Momordica charantia] >XP_038899858.1 ras-related protein Rab7 [Benincasa hispida] >TYK23140.1 ras-related protein Rab7 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 8.0e-87
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. NCBI nr
Match: KAG7029943.1 (hypothetical protein SDJN02_08287, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 40  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 99

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANP DPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 100 YDVNVMKSFDTLDNWHDEFLRQANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 159

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SK+NIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 160 SKDNIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 196

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BLAST of Carg27924 vs. ExPASy Swiss-Prot
Match: Q43463 (Ras-related protein Rab7 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-85
Identity = 147/157 (93.63%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTL+NWH+EFL+QANPPDPR FPFILLGNKIDIDGGNSRVVSEKKA++WCA
Sbjct: 88  YDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           +K NIPYFETSA+EDYNVDAAFLCIAK ALANEHEQD
Sbjct: 148 AKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy Swiss-Prot
Match: Q41640 (Ras-related protein Rab7 OS=Vigna aconitifolia OX=3918 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-85
Identity = 147/157 (93.63%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL 
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLA 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWH+EFL+QANPPDPR+FPFILLGNKIDIDGGNSRVVSEKKA++WCA
Sbjct: 88  YDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SK NIPYFETSA+ED+NVDAAFLCIAK ALANEHEQD
Sbjct: 148 SKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy Swiss-Prot
Match: O04157 (Ras-related protein RABG3b OS=Arabidopsis thaliana OX=3702 GN=RABG3B PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YV+ KFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVN +KSF++LDNWH+EFL +A+P DP  FPFILLGNK+DIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
            K NI YFETSA+EDYNVD +FLCI K ALANE +QD
Sbjct: 148 EKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQD 184

[Close]

BLAST of Carg27924 vs. ExPASy Swiss-Prot
Match: Q948K8 (Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.3e-75
Identity = 128/157 (81.53%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFS QYKATIGADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LV
Sbjct: 28  YVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNV++SFD L+ WH+EFL+QA+P DP+TFPFI+LGNKID+DGG+SRVVS+KKA +WCA
Sbjct: 88  YDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           S  NIPYFETSA++D+NVD AFL IAKTALANEHEQD
Sbjct: 148 SNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy Swiss-Prot
Match: Q9XER8 (Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-71
Identity = 123/157 (78.34%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YV++KFS QYKATIGADF+TKE+Q DDRL TLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           +DVNVMKSFD L+NW +EFL QA+P DP  FPF++LGNK+D+DGGNSRVVSEKKA+ WCA
Sbjct: 88  HDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SK NIPYFETSA+E +NVDAAF CIA+ AL NE E++
Sbjct: 148 SKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEEE 184

[Close]

BLAST of Carg27924 vs. ExPASy TrEMBL
Match: A0A6J1IIL4 (ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111473540 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-87
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy TrEMBL
Match: A0A6J1EQB2 (ras-related protein Rab7-like OS=Cucurbita moschata OX=3662 GN=LOC111436729 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-87
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy TrEMBL
Match: A0A5D3DID1 (Ras-related protein Rab7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001450 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.9e-87
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy TrEMBL
Match: A0A0A0K5B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206950 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.9e-87
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. ExPASy TrEMBL
Match: A0A6J1DPY5 (ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111023240 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.9e-87
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           SKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQD
Sbjct: 148 SKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. TAIR 10
Match: AT1G22740.1 (RAB GTPase homolog G3B )

HSP 1 Score: 283.9 bits (725), Expect = 8.0e-77
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YV+ KFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 28  YVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVN +KSF++LDNWH+EFL +A+P DP  FPFILLGNK+DIDGGNSRVVSEKKAREWCA
Sbjct: 88  YDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
            K NI YFETSA+EDYNVD +FLCI K ALANE +QD
Sbjct: 148 EKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQD 184

[Close]

BLAST of Carg27924 vs. TAIR 10
Match: AT4G09720.1 (RAB GTPase homolog G3A )

HSP 1 Score: 282.0 bits (720), Expect = 3.0e-76
Identity = 128/157 (81.53%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFS QYKATIGADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LV
Sbjct: 28  YVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCA 120
           YDVNV++SFD L+ WH+EFL+QA+P DP+TFPFI+LGNKID+DGG+SRVVS+KKA +WCA
Sbjct: 88  YDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCA 147

Query: 121 SKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           S  NIPYFETSA++D+NVD AFL IAKTALANEHEQD
Sbjct: 148 SNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQD 184

[Close]

BLAST of Carg27924 vs. TAIR 10
Match: AT4G09720.4 (RAB GTPase homolog G3A )

HSP 1 Score: 274.2 bits (700), Expect = 6.3e-74
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFS QYKATIGADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LV
Sbjct: 28  YVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQA-----NPPDPRTFPFILLGNKIDIDGGNSRVVSEKKA 120
           YDVNV++SFD L+ WH+EFL+QA      P DP+TFPFI+LGNKID+DGG+SRVVS+KKA
Sbjct: 88  YDVNVLRSFDNLETWHEEFLKQAWNIGMCPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKA 147

Query: 121 REWCASKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
            +WCAS  NIPYFETSA++D+NVD AFL IAKTALANEHEQD
Sbjct: 148 ADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQD 189

[Close]

BLAST of Carg27924 vs. TAIR 10
Match: AT4G09720.3 (RAB GTPase homolog G3A )

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-73
Identity = 128/168 (76.19%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
           YVHKKFS QYKATIGADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LV
Sbjct: 28  YVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALV 87

Query: 61  YDVNVMKSFDTLDNWHDEFLRQ-----------ANPPDPRTFPFILLGNKIDIDGGNSRV 120
           YDVNV++SFD L+ WH+EFL+Q           A+P DP+TFPFI+LGNKID+DGG+SRV
Sbjct: 88  YDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASPSDPKTFPFIVLGNKIDVDGGSSRV 147

Query: 121 VSEKKAREWCASKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQD 158
           VS+KKA +WCAS  NIPYFETSA++D+NVD AFL IAKTALANEHEQD
Sbjct: 148 VSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQD 195

[Close]

BLAST of Carg27924 vs. TAIR 10
Match: AT4G09720.2 (RAB GTPase homolog G3A )

HSP 1 Score: 267.3 bits (682), Expect = 7.7e-72
Identity = 121/149 (81.21%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 9   QYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKS 68
           QYKATIGADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++S
Sbjct: 2   QYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRS 61

Query: 69  FDTLDNWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYF 128
           FD L+ WH+EFL+QA+P DP+TFPFI+LGNKID+DGG+SRVVS+KKA +WCAS  NIPYF
Sbjct: 62  FDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYF 121

Query: 129 ETSAREDYNVDAAFLCIAKTALANEHEQD 158
           ETSA++D+NVD AFL IAKTALANEHEQD
Sbjct: 122 ETSAKDDFNVDEAFLTIAKTALANEHEQD 150

The following BLAST results are available for this feature:

BLAST of Carg27924 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930211.1	3.6e-87	100.00	ras-related protein Rab7-like [Cucurbita moschata] >XP_022974789.1 ras-related p...	[more]
KAG7032545.1	3.6e-87	100.00	hypothetical protein SDJN02_06594, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008447760.1	8.0e-87	99.36	PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo] >XP_011658964.1 ra...	[more]
XP_004139780.1	8.0e-87	99.36	ras-related protein Rab7 isoform X1 [Cucumis sativus] >XP_008447759.1 PREDICTED:...	[more]
KAG7029943.1	1.5e-85	98.09	hypothetical protein SDJN02_08287, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Carg27924 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43463	2.0e-85	93.63	Ras-related protein Rab7 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q41640	2.0e-85	93.63	Ras-related protein Rab7 OS=Vigna aconitifolia OX=3918 PE=2 SV=1	[more]
O04157	1.1e-75	84.71	Ras-related protein RABG3b OS=Arabidopsis thaliana OX=3702 GN=RABG3B PE=1 SV=1	[more]
Q948K8	4.3e-75	81.53	Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1	[more]
Q9XER8	2.2e-71	78.34	Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1	[more]

BLAST of Carg27924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIL4	1.7e-87	100.00	ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111473540 PE=4 S...	[more]
A0A6J1EQB2	1.7e-87	100.00	ras-related protein Rab7-like OS=Cucurbita moschata OX=3662 GN=LOC111436729 PE=4...	[more]
A0A5D3DID1	3.9e-87	99.36	Ras-related protein Rab7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0K5B9	3.9e-87	99.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206950 PE=4 SV=1	[more]
A0A6J1DPY5	3.9e-87	99.36	ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111023240 PE=4 SV=...	[more]

BLAST of Carg27924 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22740.1	8.0e-77	84.71	RAB GTPase homolog G3B	[more]
AT4G09720.1	3.0e-76	81.53	RAB GTPase homolog G3A	[more]
AT4G09720.4	6.3e-74	79.01	RAB GTPase homolog G3A	[more]
AT4G09720.3	1.1e-73	76.19	RAB GTPase homolog G3A	[more]
AT4G09720.2	7.7e-72	81.21	RAB GTPase homolog G3A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 5..21 score: 35.52 coord: 127..149 score: 37.32 coord: 23..45 score: 50.7 coord: 89..102 score: 41.69
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..152 e-value: 5.5E-11 score: 39.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..152 e-value: 2.0E-67 score: 240.0
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 1..157
None	No IPR available	PANTHER	PTHR47981:SF23	RAS-RELATED PROTEIN RABG3A	coord: 1..157
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..157 score: 27.786354
None	No IPR available	CDD	cd01862	Rab7	coord: 1..155 e-value: 3.29479E-107 score: 301.12
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 1..152 e-value: 1.1E-7 score: -19.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..149 e-value: 9.4E-45 score: 152.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..157 score: 14.106586
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..157 e-value: 1.5E-53 score: 182.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..152
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 4..143 e-value: 1.5E-16 score: 58.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27924-RA	Carg27924-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding