Carg27854 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27854
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1218)
Location	Carg_Chr15: 6229544 .. 6230641 (-)
RNA-Seq Expression	Carg27854
Synteny	Carg27854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCCCACTGTTGAGCTCTTCGGAGCCTTTCTCTCTCTGTCTCTCCCTGAATTCAATTCTGTGCGGTTCGTGATCTGTGGGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGTACGAAATCAACCCTCCCCACCCCCCCTTTTCTTTTACTCTTTGAATTATTGAAAAATGTTGATGCAGCTTCCTGTAACTGGGTTGGGATTGTTTCCATTTCTTGCTTCTTTTTTGTCTGATACTTGTTCTCGGACTGTTCTCGAATGGTTGTGTAATGTATACTTTCACAGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGTCATCATTTCTTTATTATCATGCCTTCACCTCAAATGGACCATTATATATTCCAACTTCTAACACCTTTAATCCATTTTTCATATGTTATAGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATCATATATGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTAGCAACCATGATCCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAAATTCAATTCAAATGAGATATAGTTGATTTCAATGGTGGGTAAGTCATAGGTTGATGGTTATTGAATGTTATATATGAAGTTGCATAATCACTTGTTGTGGTTGAGATACATAAACAAGTCATGTAAGAAAGCACATAAAAAGGTTGGCTCAAAAATTTTTTTTTTTTTGAAGCAA

mRNA sequence

CATTCCCACTGTTGAGCTCTTCGGAGCCTTTCTCTCTCTGTCTCTCCCTGAATTCAATTCTGTGCGGTTCGTGATCTGTGGGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATCATATATGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTAGCAACCATGATCCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAAATTCAATTCAAATGAGATATAGTTGATTTCAATGGTGGGTAAGTCATAGGTTGATGGTTATTGAATGTTATATATGAAGTTGCATAATCACTTGTTGTGGTTGAGATACATAAACAAGTCATGTAAGAAAGCACATAAAAAGGTTGGCTCAAAAATTTTTTTTTTTTTGAAGCAA

Coding sequence (CDS)

ATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATCATATATGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTAGCAACCATGATCCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAA

Protein sequence

MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSSSTVGMTRYA

Homology

[Close]

BLAST of Carg27854 vs. NCBI nr
Match: KAG7016790.1 (hypothetical protein SDJN02_21900 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 8.1e-102
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS
Sbjct: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMTRYA
Sbjct: 181 SSTVGMTRYA 190

[Close]

BLAST of Carg27854 vs. NCBI nr
Match: XP_022938517.1 (uncharacterized protein LOC111444728 isoform X1 [Cucurbita moschata])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMTRYA
Sbjct: 181 SSTVGMTRYA 190

[Close]

BLAST of Carg27854 vs. NCBI nr
Match: XP_023544604.1 (uncharacterized protein LOC111804138 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.9 bits (964), Expect = 2.0e-100
Identity = 187/190 (98.42%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHL+VVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLIVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. NCBI nr
Match: KAG6579279.1 (hypothetical protein SDJN03_23727, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.8 bits (961), Expect = 4.5e-100
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLT GGNRAWTIIYFLSSWASFLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTSGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS
Sbjct: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. NCBI nr
Match: XP_022973554.1 (uncharacterized protein LOC111472088 isoform X1 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWAS LVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASLLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNLGCETLRKGVFIAGAVFVVATMILNVYYY+YFTKATSS ASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYVYFTKATSSRASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. ExPASy TrEMBL
Match: A0A6J1FE96 (uncharacterized protein LOC111444728 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444728 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.8e-102
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMTRYA
Sbjct: 181 SSTVGMTRYA 190

[Close]

BLAST of Carg27854 vs. ExPASy TrEMBL
Match: A0A6J1IEX4 (uncharacterized protein LOC111472088 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472088 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.1e-99
Identity = 185/190 (97.37%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWAS LVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASLLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNLGCETLRKGVFIAGAVFVVATMILNVYYY+YFTKATSS ASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYVYFTKATSSRASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. ExPASy TrEMBL
Match: A0A1S3CPP1 (uncharacterized protein LOC103503388 OS=Cucumis melo OX=3656 GN=LOC103503388 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSG+SLLM VTKCMCFGRPLTPGGNRAWTIIYFLSS A+FLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSS ASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. ExPASy TrEMBL
Match: A0A0A0KQ16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373210 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 180/190 (94.74%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSG+SLLM VTKCMCFG+PLTPGGNRAWTIIYFLSS A+FLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRG+IYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSS  SHKANRS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]

BLAST of Carg27854 vs. ExPASy TrEMBL
Match: A0A6J1I460 (uncharacterized protein LOC111470459 OS=Cucurbita maxima OX=3661 GN=LOC111470459 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.7e-93
Identity = 176/191 (92.15%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
            FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW IIYFLSSWA+F+VAEACLIAGA KNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120

Query: 121 YHTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSPASHKANR 180
           YHTKYRG+IYAQNL CETLRKGVFIAGAVFVVATMILNVY+YMYFTKAT SS ASHKA R
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYFYMYFTKATSSSQASHKAKR 180

Query: 181 SSSTVGMTRYA 191
           SSSTVGMT YA
Sbjct: 181 SSSTVGMTEYA 191

[Close]

BLAST of Carg27854 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EGK STLV +LVV L LVAFGFSIAAERRRS+G   +D   N T+CVY+SDVATGYGVGA
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLS ESLLM VTKCMCFGRPL PG +RAW+IIYF+SSW +FLVAEAC+IAGATKNAY
Sbjct: 63  FLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAY 122

Query: 122 HTKYRGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKY   + +Q   C +LRKG+FIAGAVF+VATM+LNVYYYMYFTK+ SSP +HKANRSS
Sbjct: 123 HTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSS 182

Query: 182 STVGMTRYA 191
           S +GM  YA
Sbjct: 183 SNIGMAGYA 188

[Close]

BLAST of Carg27854 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 172.9 bits (437), Expect = 2.4e-43
Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S +V  +V V  L+AFG ++AAE+RRS   + +D +    YCVY+SD ATGYGVGAFLF 
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
           ++ + L+M V++C C G+PL PGG+RA  +I F+ SW  FL+AE CL+AG+ +NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 126 RGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPAS 175
           R +       C+TLRKGVF AGA FV    I++ +YY ++  A  +  S
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLS 171

[Close]

BLAST of Carg27854 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 161.4 bits (407), Expect = 7.2e-40
Identity = 81/178 (45.51%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S L+ LLV V  L+AFG ++AAE+RR+   +  +  R+ +YCVY+ D+ATG GVG+FL L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRE-SRDLSYCVYDKDIATGLGVGSFLVL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
           L+ + L+M  ++C+C GR LTP G+R+W I  F+++W  F +A+ CL+AG+ +NAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 126 RGIIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATS-SPASHKANRSSS 183
           R      +  C +LRKGVF AGA F+V T I++  YY+  ++A    P+     R SS
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPSRDPGIRMSS 179

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BLAST of Carg27854 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-39
Identity = 77/164 (46.95%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D+ +   YCVY +D+AT YG GAF+ L
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
              + L+M  ++C C G+ L PGG+RA  II FL  W  FL+AE CL+A + +NAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 126 RGIIYAQN-LGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R +   ++   CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

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BLAST of Carg27854 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-38
Identity = 76/164 (46.34%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D ++   +C Y SD+AT YG GAF+ L
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
              + ++M  ++C C G+ L PGG+RA  I+ FL  W  FL+AE CL+AG+ +NAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 126 RGIIYAQN-LGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R +   +N   CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRA 166

The following BLAST results are available for this feature:

BLAST of Carg27854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016790.1	8.1e-102	100.00	hypothetical protein SDJN02_21900 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938517.1	1.8e-101	99.47	uncharacterized protein LOC111444728 isoform X1 [Cucurbita moschata]	[more]
XP_023544604.1	2.0e-100	98.42	uncharacterized protein LOC111804138 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6579279.1	4.5e-100	98.95	hypothetical protein SDJN03_23727, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022973554.1	1.9e-98	97.37	uncharacterized protein LOC111472088 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg27854 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg27854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE96	8.8e-102	99.47	uncharacterized protein LOC111444728 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IEX4	9.1e-99	97.37	uncharacterized protein LOC111472088 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CPP1	1.6e-95	95.79	uncharacterized protein LOC103503388 OS=Cucumis melo OX=3656 GN=LOC103503388 PE=...	[more]
A0A0A0KQ16	1.0e-94	94.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373210 PE=4 SV=1	[more]
A0A6J1I460	9.7e-93	92.15	uncharacterized protein LOC111470459 OS=Cucurbita maxima OX=3661 GN=LOC111470459...	[more]

BLAST of Carg27854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13380.1	1.1e-77	74.60	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	2.4e-43	49.11	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	7.2e-40	45.51	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	2.7e-39	46.95	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	4.0e-38	46.34	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 61..156 e-value: 4.5E-22 score: 78.3
None	No IPR available	PANTHER	PTHR31769:SF5	EXPRESSED PROTEIN	coord: 3..190
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27854-RA	Carg27854-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane