Carg27816 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27816
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH94-like
Location	Carg_Chr10: 7168992 .. 7175309 (-)
RNA-Seq Expression	Carg27816
Synteny	Carg27816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAGTTTCAAAAATAATGAAACTTTGTTCGATCACTTTCTCTTATTATTTCTTTACCTCCCCGTCCCCGTTTTCGTCCTCTCGTTCTTGGCCTTTCATGGCGTCCACCGATCGTAGCAACCTAAGCAACCCGAACAACGTAATCGACGTTGAAGTGTCGATGGCGGAGTGTCATGCAAGGATTAAGATAAGATGTAGAAAGTTCCCGAAGCAGCTTCGTAAGATCGTGTCCGGCTTGCATTCCTTGCGCCTCACTGTTCTTCATCTCAATGTCTCCACGGCTCATGAGATTGCGCTCTACTCTTTCACTCTCAAGGTTGGTTTGTAATGCTCTTATTATTACAATATTTTATTGTTCATGGTTGGACGAAAGTCCCACGTTGGCTAATTTAGAGTAATATTGTCTCGGTTTTGACTAATTAATTAATTAATTAGGTTGAGGAAGATTGTGGGCTTTGCTCGGAGGAGGAAATTTCAAGAGGCGTGCATCAATTGCTTTGCAGAATTCAAGAAGAGGCATTCTCAGTTTGATTTTTTTTTTTTTTTTAAATAGAATTTTAATTAATGATCTTGAATTTTCTTTTTCTTGATGGAGTTGGAGCTTCACATTGTAAACTTTGAGATTGTATTTGTTTCGTTCTTCTTTGTCTTTTTCTCTCTCTAAGTTTTTTTTGTCGATTCAATAGGTTCTTTAGCGTCCTCACTCGCACGTGTTTCCCTCTCCAATGATGTGGGATCGCGTGTTTTCCTCTCCAATCGTTGTGGGATCTCACAATCTACCTCCCTTTGGGGCTCAGTGTCTTTGCTAGCACTTTGCCCCCAGTGTTCATCCCCTTCAGGGTTCAACGTCTTTGTTAACACACTGCCCAGTGTCTATGTAATGACACAAGCCCACTGTTAGCAGATATTGTCTTCTTTGGCACTCTGCCCCCAGTGTTCATCTCCCTTCAGGGCTCAACGTTCTTGCTAAGACACTGCCCGGCACAAACCCACTATTAATAGATACTGTCTTCTTTGGCACTCTGCCCCAGTGTCTATCCCCTTTCAAGGCTCAACGTCCTTACTAACACATTGCCCTTCAGGGCTCAATGTCCTTGCTAACACACTGCCCAGTGTCTGTGTAATGGCACAAGCCCACTGTTAGCAGATATTGTCTTCTTTGGCACTCTGCCCCCAGTGTCCATCCCCCTTCAAGGCTCAACGTCCTTGCTAACACACTGTCCAGTATTTGTGTAATGGCACAAGCCCAATGTTAGTAGATATTGTCTTCTTTGGCACTCTGCCCCCAGTGCCCATCCCCCTTCAAGGCTCAACGTCCTTGCTAACACACTGTCCAGTGTTTGTGTAATGGCACAAGCCCAATGTTAGCAGATATTGTCTTCTTTGGTTTTTCCCTTTCGGACTTCCCTTCAAAGCTTTAAAGTGTTCCGTTCTCTTCCCCAACCAATGGGGATATCACAGTCTGACTCTAATACTATTTGTAATGACCCATACTCACCGCCAGTAGATATTGTCCTTTTTGGGGTTTTCCCTCAAGGTTTTTAAAATGCTTCTGCTAGGAAGAGGTTTCCACACTCTTATAAATGATGTTTCGTTCTCCTCCCCGACCTGTGGGATATCACAGTCTCGCTCTGATACCATTTGTAATGACCCAAGCCCACTGCTAGTAGATATTGTCTTCTTTAGTCTTTTCCCTTTTGGGTTTCATCTCACGTCTAGCATTTCAACGACTACATCTTTAATGATTCTATTGACATGACTAAATTAACCCAACGACACCAATAATAATATGAGTGACATAATAAGTAATTATATGTTATTTAATGATGGAGAATAATTTAATTAAATAGGTAATTATTGTAATTATGTTAGGGTAAACATTGAATGATATTTGTAATTAAATCATATGGGGAATCCCAATGCAAAGGGAAAAAGCTGATTTTGGATGTGGGGTTTTGAATCCCTTTAACAGAACATAATAAAATGTTGACAAATAATGCAAAAAGTTGTGGTCATAAATGGTTCGACAGACATTTTTATAATTATATATCAAATATTATGTCACATTTTTAATAAATCCTTTTTTTTATTATAAATAAATAAATAAATCATGTGTTTAAGGTTTTTGTTTATGTTGTCTCGAAATAACATGTCAATGTCCCGTGTTGTATGAAAATGTTTTCAAAATGTATTTTTGTTTGATTCGCTCGTGTATTTTGTGTTAAACATAACTAGATCATATCTGTATATAATAAAATAATCTACTAATTTACTCGTTTGTTGCCATGAATTAAGGAGAATTTATGATTTTATGGTGTGTTAAAATGTAATCCTCATTATACACCTCTATAAATACATGAGGTGTTGACCCATATACATCACAATGTCATTCAACCTATCTATGATGTCCCACATTGGTTGGGGAAGAGAATAAAACACTATTTATAAGAGTATGGAAACCTTCCCCTAACAGATACGTTTTAAAACCTTGAGGGGAAGCTTGAGATGGGAAAATCCAAAGAGGATAATATCGGCTAGCGGTGGATCTGGGTTGTTACAAATGGTATCAGAGTCAAACATCGAACGATGTGCCAGCCTTCTCGCTGTTCTCCGAAGGGGTAGACATGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGTGGATTTGGTGGCTGTCCCACATTGATTGGAAGAAGGAAAGAGTCCCCGAAGGGGGTGGATTTGGCCCCGAAGAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGGGAACAAAACACCATTTATAAGAGTGTGAAAACCTCCCCTAACAGGCCATTTATAAGCAATATATTTAAAAAAAATTTATATTTAAATAAATATATTTTAAATTTTTTTAATTAAATAAATATATATTATTAAAATTCTTTAAATAAATTTTAATTAAATAAATATATTTTAAATTATTTCATTCCACTGCCAGGGTAGTTATTTTAATTATTAAAATTCTTTAAATCAATTTTAATTAAATAAGTATATTTTAAATTATTTCATTACACTAGCAGGATTATTATTTTAATTTTATGAATTTAAATTATTAAAATTCTTTAAATCAATTTTAATTAAATAAATATATTTTAAATTTTAGGTTTTTGAGTTTTTGAGTTTTTTTTAAGTCGATTAATCTTAATAATTATTTTCAAATAAATATTTTAATAAAATTATATAAATAATAGTAAACAATGAGTGCAATAATCAAATCAAAAAATTAATCATGCATGCTATATTTTTAAAATAAATTATCATCTTTAAATGATTAGAATTATATAATTATGATAAATTATTATTAAAATAATAAAAAAGGTCTTATAGCATATACTTAAAAAAATAATAAATAAAAATAAAAATTGAAGGTAAAATAGAAGGAAAACAAGACATAAAAATAGAAAAGAAAATATGGAGTGAAGTTGAAGAAAAAATGAAGGAAAAAATAGAAGAGAAGCCAAAAGGTTTTCTAAAATTCCTTGGTTTTGGAGTGGATTGTGAGATCTAAGGTCGGCTATAGAGGGGATTGAAACATTCCTTACAAGAGTGTGGAAACCTCTCCCCAGAAGACGCATTTTAAAATCGTGAGGCTGACGGCGATACGTAACAGGTCAAAACGGACAATTTTTATTAGTGGTGGGACTTGGGCGGTTATAAATGGTATCAACGCCAAACCTCAGATGATGTGCCAACGAGAATGAAACACTTTTTACAAGTGTGTAGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGTTGACTGTGATACGTAACGGGCAAAAGCAAACAATATTTGCAAGTGGTGGGTTTGAGTTATAACGATACTAGATTTCTACTAACCTAAAGTTACTACCTTCATTATAGTCTACGCTCTTATGTGGAATTAAACATTTAAAACGTCATCATGAAACATAATCTTCAACTTAATAACATAGTTTCAACTTAAAACACTGTCATGGTCTTACATGTTCAAAAACATATTCAAAACAAGATAAAAATAATAATAATTAAATAAAGTAAAACATTAAATGCAAAACACCCTATACTAACCTTAGTCTAGGAAACTAAAATACTACTAGCCTATGCATGTGTCATAATAATTACGATGTCGTCAATAGCCGTATAAGGGTGCCTTGCCTTTACATAAAAATAGAAGTAGCACACGACTTTGAGTATTTTAAGAAATACTCAGTAAGTGACCCCACTGTTGGAGTTAGGGAATGCAAACACAGGCAACTCATGGTCTGGGGACCTATCGTTAAAAAAAAAAAATAAATAAATAAAAAATAATCATAGGGGTGGCCTCTAGTCTGGACAAAATTGGACGTGTAGTACTTCCCTACATACAACCCACACGTGTGAGCGTGGATCCCTAGGCAATTCGCACCCCCCTAAATCCATCAAAGTTGAGTTAGCTATCTATAACGACGTTTGGAGATTAGCAGACTCCTGAAAGTCATGTGAGGCATGATGATGATCATCATCGTAGTGTACGCGTCTGTACTCATCATCGTAAAAGGAGAAGTAGCCCGATGTATATGTACATATAGAATGCATGAGGTACCTATAGTTTCTCATCTTTAAAACATCTTTATGACACAATCCTAAGTTTCGTTCACGTGTAGTACTTCCCTAAATACAACCCACACGTGGGAGCGTGGATCTCCAGGCAATTCGCACCCCCCTAGATCCATCAAAGTTGAGTTAGCTAACATTAATTAGGGTTGTGTCCTAAATTCATCGTCACAATGCAGCATGACATTTAAAACATGCATTTCATCTTAATATAGAATAACATCATATTAAGGAATTTCATAATCTTACATCTTACATCATCATGTTATCATGCATCATCGTCATCATACAATGTCATCATATAAAAACATCATAAAATATCATATACTATCATATGATATCATCATATGACTCAAATAATTCATCATATGTGATACATCACATCCTACATCCATCATCATAAAATATAATCACAACATAAAAAATATAAAGCATAAATGATAGGTGGCGGAGAATATTTGATAAAACCACTCCACCTGAATGGTGGTGAAAGTTTTCTATTTATAATCATTTACAGAATGAAATAAACTACAAATGATATGGAAAGAGTAATAAATGGATACAAGATATTTTCTTATAATAAATAGTCAAATATGATACCTATGAAGGCAAATATCTAGATATTTGCCTATAATAAAGAGTAAAATATGATACCTATAGTAGGTCGTAATGAAAGGCTAAATGTCATAGGAGTGGAGTTAGAAGACTCAAGGGAGTGTTGGAACAACTCAAAACTTTCAGCTTTAGAGATTAAATTTGCAAAATAGGAGAGAGAAGTGAGAGACATATGAGCAGTAGAAAAAGTTGAAAAATCTATGCTGAGTCACGAAGGAACCAGTACACTTTGTCTTCGAAGGGTCTGCCAATGGCATGAAGTTGGTCACAGATTGTTTTGAAGGTACGGTCATAATCATCAACATGTAACGATTCAGATTTTTCATTTTTGCCTTATTTGGTTAAGATTTTATTTTTATATGTTATGCATTTATTCTGGCCAGAAAATGTGAATTTTTCAACAAGGAAGTTATTACTTTAATGTAAATGTATGAAAACCTTTTATATTCCTATATTCAATTTTCTCCTTCCTTGAAAACAACTTTTGCTCTCCAAACTTGTTTTTTGTTTTCAAGGGTGTCTGAGAGTACGGCAAAAATCGAGAGTGTTAGCCGGAAAAACGTGTGGGTTGGTTCGCTGGGTAGTTTTCTTGTTCGGCAAGTTCTCGAAACCGATTCTATTGCTGTTTTGGAGGAAGAGTCGAGTGGAAGTTACGACATCGGAATCGCTGCATCAAAGAAGGCAAACGTCGAAACGAAGGAGGAGGACGCCACATACCGTCGTCGGAAACGGAAGGGATTGCATCGTTGTTGGCGGCGACACATCAAATTAGGGTTTTCGTGAGGGTTCGGGCGAAGAAGACGCAGAGTCGGGTCGGGTTTCGGCCTCTGAACCGGCCCACAGAACGAACACGGGTCTTGTACGTTTCGGCCCAACATGGACGCGCGCTGCAGCCTTGGTCTCGGCTCCGCACGCGTGCTCTCAGCTCGGCTTGACGTGTACAGCGGCTCGGCTCCGTCAAAACCCGCGGCTCTGCTCCGTCAAATCCCGCAGCTCAGCTTGGTGGCTTAGTTGGTCGGCTCGGCAGCTCTGCTTATCGGCTTAGTATCACTATAATATATCGATTCCAAGGTTCTTGGCCCTTCTGA

mRNA sequence

ATAAAAGTTTCAAAAATAATGAAACTTTGTTCGATCACTTTCTCTTATTATTTCTTTACCTCCCCGTCCCCGTTTTCGTCCTCTCGTTCTTGGCCTTTCATGGCGTCCACCGATCGTAGCAACCTAAGCAACCCGAACAACGTAATCGACGTTGAAGTGTCGATGGCGGAGTGTCATGCAAGGATTAAGATAAGATGTAGAAAGTTCCCGAAGCAGCTTCGTAAGATCGTGTCCGGCTTGCATTCCTTGCGCCTCACTGTTCTTCATCTCAATGTCTCCACGGCTCATGAGATTGCGCTCTACTCTTTCACTCTCAAGGTTGAGGAAGATTGTGGGCTTTGCTCGGAGGAGGAAATTTCAAGAGGCGTGCATCAATTGCTTTGCAGAATTCAAGAAGAGGCATTCTCAAGTCAAACATCGAACGATGTGCCAGCCTTCTCGCTGTTCTCCGAAGGGGTAGACATGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGTGGATTTGGTGGCTGTCCCACATTGATTGGAAGAAGGAAAGAGTCCCCGAAGGGGGTGGATTTGGCCCCGAAGAGGGGGTGGATTGTGATGTCCCACATTGGGTGTCTGAGAGTACGGCAAAAATCGAGAGTGTTAGCCGGAAAAACGTGTGGGTTGGTTCGCTGGGTAGTTTTCTTGTTCGGCAAGTTCTCGAAACCGATTCTATTGCTGTTTTGGAGGAAGAGTCGAGTGGAAGTTACGACATCGGAATCGCTGCATCAAAGAAGGCAAACGGTTTTCGTGAGGGTTCGGGCGAAGAAGACGCAGAGTCGGGTCGGGTTTCGGCCTCTGAACCGGCCCACAGAACGAACACGGGTCTTCGGCTCGGCTCCGTCAAAACCCGCGGCTCTGCTCCGTCAAATCCCGCAGCTCAGCTTGGTGGCTTAGTTGGTCGGCTCGGCAGCTCTGCTTATCGGCTTAGTATCACTATAATATATCGATTCCAAGGTTCTTGGCCCTTCTGA

Coding sequence (CDS)

ATGAAACTTTGTTCGATCACTTTCTCTTATTATTTCTTTACCTCCCCGTCCCCGTTTTCGTCCTCTCGTTCTTGGCCTTTCATGGCGTCCACCGATCGTAGCAACCTAAGCAACCCGAACAACGTAATCGACGTTGAAGTGTCGATGGCGGAGTGTCATGCAAGGATTAAGATAAGATGTAGAAAGTTCCCGAAGCAGCTTCGTAAGATCGTGTCCGGCTTGCATTCCTTGCGCCTCACTGTTCTTCATCTCAATGTCTCCACGGCTCATGAGATTGCGCTCTACTCTTTCACTCTCAAGGTTGAGGAAGATTGTGGGCTTTGCTCGGAGGAGGAAATTTCAAGAGGCGTGCATCAATTGCTTTGCAGAATTCAAGAAGAGGCATTCTCAAGTCAAACATCGAACGATGTGCCAGCCTTCTCGCTGTTCTCCGAAGGGGTAGACATGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGTGGATTTGGTGGCTGTCCCACATTGATTGGAAGAAGGAAAGAGTCCCCGAAGGGGGTGGATTTGGCCCCGAAGAGGGGGTGGATTGTGATGTCCCACATTGGGTGTCTGAGAGTACGGCAAAAATCGAGAGTGTTAGCCGGAAAAACGTGTGGGTTGGTTCGCTGGGTAGTTTTCTTGTTCGGCAAGTTCTCGAAACCGATTCTATTGCTGTTTTGGAGGAAGAGTCGAGTGGAAGTTACGACATCGGAATCGCTGCATCAAAGAAGGCAAACGGTTTTCGTGAGGGTTCGGGCGAAGAAGACGCAGAGTCGGGTCGGGTTTCGGCCTCTGAACCGGCCCACAGAACGAACACGGGTCTTCGGCTCGGCTCCGTCAAAACCCGCGGCTCTGCTCCGTCAAATCCCGCAGCTCAGCTTGGTGGCTTAGTTGGTCGGCTCGGCAGCTCTGCTTATCGGCTTAGTATCACTATAATATATCGATTCCAAGGTTCTTGGCCCTTCTGA

Protein sequence

MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFSSQTSNDVPAFSLFSEGVDMRRCASKDAGPRRGWIWWLSHIDWKKERVPEGGGFGPEEGVDCDVPHWVSESTAKIESVSRKNVWVGSLGSFLVRQVLETDSIAVLEEESSGSYDIGIAASKKANGFREGSGEEDAESGRVSASEPAHRTNTGLRLGSVKTRGSAPSNPAAQLGGLVGRLGSSAYRLSITIIYRFQGSWPF

Homology

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BLAST of Carg27816 vs. NCBI nr
Match: KAG7023938.1 (Transcription factor bHLH96 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 658.7 bits (1698), Expect = 2.7e-185
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60
           MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC
Sbjct: 1   MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60

Query: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL 120
           RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL
Sbjct: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL 120

Query: 121 LCRIQEEAFSSQTSNDVPAFSLFSEGVDMRRCASKDAGPRRGWIWWLSHIDWKKERVPEG 180
           LCRIQEEAFSSQTSNDVPAFSLFSEGVDMRRCASKDAGPRRGWIWWLSHIDWKKERVPEG
Sbjct: 121 LCRIQEEAFSSQTSNDVPAFSLFSEGVDMRRCASKDAGPRRGWIWWLSHIDWKKERVPEG 180

Query: 181 GGFGPEEGVDCDVPHWVSESTAKIESVSRKNVWVGSLGSFLVRQVLETDSIAVLEEESSG 240
           GGFGPEEGVDCDVPHWVSESTAKIESVSRKNVWVGSLGSFLVRQVLETDSIAVLEEESSG
Sbjct: 181 GGFGPEEGVDCDVPHWVSESTAKIESVSRKNVWVGSLGSFLVRQVLETDSIAVLEEESSG 240

Query: 241 SYDIGIAASKKANGFREGSGEEDAESGRVSASEPAHRTNTGLRLGSVKTRGSAPSNPAAQ 300
           SYDIGIAASKKANGFREGSGEEDAESGRVSASEPAHRTNTGLRLGSVKTRGSAPSNPAAQ
Sbjct: 241 SYDIGIAASKKANGFREGSGEEDAESGRVSASEPAHRTNTGLRLGSVKTRGSAPSNPAAQ 300

Query: 301 LGGLVGRLGSSAYRLSITIIYRFQGSWPF 330
           LGGLVGRLGSSAYRLSITIIYRFQGSWPF
Sbjct: 301 LGGLVGRLGSSAYRLSITIIYRFQGSWPF 329

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BLAST of Carg27816 vs. NCBI nr
Match: XP_022961533.1 (transcription factor bHLH96-like [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 4.9e-62
Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60
           MKLCSITFS YFFTSPSPFSSS SWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC
Sbjct: 1   MKLCSITFS-YFFTSPSPFSSSHSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60

Query: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL 120
           RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGV+QL
Sbjct: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVYQL 120

Query: 121 LCRIQEEAFS 131
           LCRIQEEAFS
Sbjct: 121 LCRIQEEAFS 129

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BLAST of Carg27816 vs. NCBI nr
Match: XP_023520772.1 (transcription factor bHLH96-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.4 bits (555), Expect = 9.2e-53
Identity = 117/130 (90.00%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60
           MKLCSITFS YFFTSP  FSS RS  FMASTDR   +NPNNVIDVEVSMA+C+ARIKIRC
Sbjct: 1   MKLCSITFS-YFFTSPFSFSSFRSRLFMASTDR---NNPNNVIDVEVSMADCNARIKIRC 60

Query: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL 120
           RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGV+QL
Sbjct: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVYQL 120

Query: 121 LCRIQEEAFS 131
           LCRIQEEAFS
Sbjct: 121 LCRIQEEAFS 126

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BLAST of Carg27816 vs. NCBI nr
Match: KAG6590375.1 (Transcription factor basic helix-loop-helix 96, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 28  MASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVS 87
           MASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVS
Sbjct: 1   MASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVS 60

Query: 88  TAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS 131
           TAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS
Sbjct: 61  TAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS 103

[Close]

BLAST of Carg27816 vs. NCBI nr
Match: XP_022968825.1 (transcription factor bHLH96-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-45
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 28  MASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVS 87
           MASTDRSN SNPNNVID+EVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVL LNVS
Sbjct: 1   MASTDRSNSSNPNNVIDIEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLQLNVS 60

Query: 88  TAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS 131
           TAH+IALYSFTLKVEEDC LCSEEEISRGV+QLLCRIQEEAFS
Sbjct: 61  TAHQIALYSFTLKVEEDCALCSEEEISRGVYQLLCRIQEEAFS 103

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BLAST of Carg27816 vs. ExPASy Swiss-Prot
Match: Q9C7T4 (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.2e-16
Identity = 49/115 (42.61%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 14  TSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSG 73
           +S  PFS   ++P   S   ++ +    + ++EV+M E HA +KI  +K P+QL K+VS 
Sbjct: 204 SSSGPFSDFFAFP-QYSNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSS 263

Query: 74  LHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEA 129
           + SLRLT+LHLNV+T  +  LYS ++KVEE   L + E+I+  V+Q+L RI+EE+
Sbjct: 264 IQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of Carg27816 vs. ExPASy Swiss-Prot
Match: Q9SK91 (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 9.4e-16
Identity = 46/111 (41.44%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 18  PFSSSRSWPFMASTDRSNL-SNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHS 77
           PF+   S+P  ++   S++  + ++  ++EV++AE HA IKI  +K P+QL K+++ L S
Sbjct: 193 PFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQS 252

Query: 78  LRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEE 128
           LRLT+LHLNV+T H   LYS +++VEE   L + ++I+  ++Q + RIQEE
Sbjct: 253 LRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303

[Close]

BLAST of Carg27816 vs. ExPASy Swiss-Prot
Match: Q56XR0 (Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.3e-13
Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 5   SITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRK-- 64
           S++ S +F  S  P   +R+     ST  S++  P  + D+EV++ E HA I+I  R+  
Sbjct: 177 SLSLSQFFLHSYDPSQENRN----GST--SSVKTP--MEDLEVTLIETHANIRILSRRRG 236

Query: 65  ---------FPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEI 124
                     P QL K+V+ L SL L++LHL+V+T    A+YS + KVEE C L S ++I
Sbjct: 237 FRWSTLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDI 296

Query: 125 SRGVHQLLCRIQEEAFSSQTSNDVP 139
           +  VH +L  I+EE F   + +++P
Sbjct: 297 AGAVHHMLSIIEEEPFCCSSMSELP 313

[Close]

BLAST of Carg27816 vs. ExPASy Swiss-Prot
Match: Q9M128 (Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.3e-12
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 44  DVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEE 103
           +VE ++ + H  +K+RC++  +Q+ K +  +  L+L +LHL +S++ +  +YSF LK+E+
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282

Query: 104 DCGLCSEEEISRGVHQLLCRIQEEAFSSQTS 135
            C L S +EI+  VHQ+  +I  E   S  S
Sbjct: 283 GCKLGSADEIATAVHQIFEQINGEVMWSNLS 313

[Close]

BLAST of Carg27816 vs. ExPASy Swiss-Prot
Match: Q9FKQ6 (Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 43/120 (35.83%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 12  FFTSPSPFSSSRSWPFMASTDRSNLSNPNN---VIDVEVSMAECHARIKIRCRKFPKQLR 71
           FF  P   +++ +    AS+  S+  +      V DVEV+M E HA IK+  +  P+ L 
Sbjct: 176 FFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLF 235

Query: 72  KIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLC-SEEEISRGVHQLLCRIQEE 128
           KI++  +SL L+ LHLN++T+ +++L++F++KVE DC L  S  E++  VH+++ R+ +E
Sbjct: 236 KIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

[Close]

BLAST of Carg27816 vs. ExPASy TrEMBL
Match: A0A6J1HC29 (transcription factor bHLH96-like OS=Cucurbita moschata OX=3662 GN=LOC111462080 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.4e-62
Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MKLCSITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60
           MKLCSITFS YFFTSPSPFSSS SWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC
Sbjct: 1   MKLCSITFS-YFFTSPSPFSSSHSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRC 60

Query: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQL 120
           RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGV+QL
Sbjct: 61  RKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVYQL 120

Query: 121 LCRIQEEAFS 131
           LCRIQEEAFS
Sbjct: 121 LCRIQEEAFS 129

[Close]

BLAST of Carg27816 vs. ExPASy TrEMBL
Match: A0A6J1HYA2 (transcription factor bHLH96-like OS=Cucurbita maxima OX=3661 GN=LOC111467945 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.9e-46
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 28  MASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVS 87
           MASTDRSN SNPNNVID+EVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVL LNVS
Sbjct: 1   MASTDRSNSSNPNNVIDIEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLQLNVS 60

Query: 88  TAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS 131
           TAH+IALYSFTLKVEEDC LCSEEEISRGV+QLLCRIQEEAFS
Sbjct: 61  TAHQIALYSFTLKVEEDCALCSEEEISRGVYQLLCRIQEEAFS 103

[Close]

BLAST of Carg27816 vs. ExPASy TrEMBL
Match: A0A0A0LW29 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570740 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 85/136 (62.50%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 9   SYYFFTSPSPFSSSRSW--------PFMASTDRSNLSNPNNVI-----DVEVSMAECHAR 68
           S+ F +S SP SSS S+          +A T  +NL+N N+VI     D+EVSM + HA 
Sbjct: 211 SFTFPSSSSPSSSSSSFSLDDNNGSTIVAMTTSNNLNNLNSVIQTSIGDIEVSMVDSHAN 270

Query: 69  IKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISR 128
           +KIRC+K PKQL KIVSGLHSL LTVLHLNVSTAH   LYSF+LKVEEDCGL S +EIS 
Sbjct: 271 LKIRCKKLPKQLLKIVSGLHSLHLTVLHLNVSTAHPFVLYSFSLKVEEDCGLSSVDEISN 330

Query: 129 GVHQLLCRIQEEAFSS 132
           GV+QLLCRIQEEAFS+
Sbjct: 331 GVYQLLCRIQEEAFSN 346

[Close]

BLAST of Carg27816 vs. ExPASy TrEMBL
Match: A0A1S3BQS8 (transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103492192 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 82/140 (58.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 9   SYYFFTSPSPFSSSRSWPF---------MASTDRSNLSNPNN--------VIDVEVSMAE 68
           S+ F +S SP SSS S+           +A T  +NL+N NN        + D+EVSM +
Sbjct: 216 SFTFPSSSSPSSSSSSFSLDDNNNASTVVAMTTSNNLNNMNNLNSLIQTSIGDIEVSMVD 275

Query: 69  CHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEE 128
            HA +KIRC+K PKQL KIVSGLHSL L+VLHLNVSTAH+  LYSF+LKVEEDCGL S +
Sbjct: 276 SHANLKIRCKKLPKQLLKIVSGLHSLHLSVLHLNVSTAHQFVLYSFSLKVEEDCGLSSVD 335

Query: 129 EISRGVHQLLCRIQEEAFSS 132
           EI+ GV+QLLCRIQEEAFS+
Sbjct: 336 EIANGVYQLLCRIQEEAFSN 355

[Close]

BLAST of Carg27816 vs. ExPASy TrEMBL
Match: A0A6J1ERT7 (transcription factor bHLH94-like OS=Cucurbita moschata OX=3662 GN=LOC111437135 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-28
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 11  YFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKI 70
           +FFT P   SS+ +    +S   S+    + +  V VSMA+ HA +KIRC KFPKQL KI
Sbjct: 159 HFFTCPH-LSSAAAAASSSSPPMSSNQIHSPIAHVHVSMADSHANLKIRCTKFPKQLLKI 218

Query: 71  VSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEAFS 130
           VS LHSLRL+VLHLN+STAH+  LYSF+LKVEEDCGL SE+EI+R V+QL+CRIQEEAFS
Sbjct: 219 VSALHSLRLSVLHLNLSTAHQTVLYSFSLKVEEDCGLSSEDEIARAVYQLVCRIQEEAFS 277

[Close]

BLAST of Carg27816 vs. TAIR 10
Match: AT1G72210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-17
Identity = 49/115 (42.61%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 14  TSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSG 73
           +S  PFS   ++P   S   ++ +    + ++EV+M E HA +KI  +K P+QL K+VS 
Sbjct: 204 SSSGPFSDFFAFP-QYSNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSS 263

Query: 74  LHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEEA 129
           + SLRLT+LHLNV+T  +  LYS ++KVEE   L + E+I+  V+Q+L RI+EE+
Sbjct: 264 IQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of Carg27816 vs. TAIR 10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 6.7e-17
Identity = 46/111 (41.44%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 18  PFSSSRSWPFMASTDRSNL-SNPNNVIDVEVSMAECHARIKIRCRKFPKQLRKIVSGLHS 77
           PF+   S+P  ++   S++  + ++  ++EV++AE HA IKI  +K P+QL K+++ L S
Sbjct: 193 PFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQS 252

Query: 78  LRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEISRGVHQLLCRIQEE 128
           LRLT+LHLNV+T H   LYS +++VEE   L + ++I+  ++Q + RIQEE
Sbjct: 253 LRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303

[Close]

BLAST of Carg27816 vs. TAIR 10
Match: AT5G46690.1 (beta HLH protein 71 )

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-14
Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 5   SITFSYYFFTSPSPFSSSRSWPFMASTDRSNLSNPNNVIDVEVSMAECHARIKIRCRK-- 64
           S++ S +F  S  P   +R+     ST  S++  P  + D+EV++ E HA I+I  R+  
Sbjct: 177 SLSLSQFFLHSYDPSQENRN----GST--SSVKTP--MEDLEVTLIETHANIRILSRRRG 236

Query: 65  ---------FPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLCSEEEI 124
                     P QL K+V+ L SL L++LHL+V+T    A+YS + KVEE C L S ++I
Sbjct: 237 FRWSTLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDI 296

Query: 125 SRGVHQLLCRIQEEAFSSQTSNDVP 139
           +  VH +L  I+EE F   + +++P
Sbjct: 297 AGAVHHMLSIIEEEPFCCSSMSELP 313

[Close]

BLAST of Carg27816 vs. TAIR 10
Match: AT4G01460.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-13
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 44  DVEVSMAECHARIKIRCRKFPKQLRKIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEE 103
           +VE ++ + H  +K+RC++  +Q+ K +  +  L+L +LHL +S++ +  +YSF LK+E+
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282

Query: 104 DCGLCSEEEISRGVHQLLCRIQEEAFSSQTS 135
            C L S +EI+  VHQ+  +I  E   S  S
Sbjct: 283 GCKLGSADEIATAVHQIFEQINGEVMWSNLS 313

[Close]

BLAST of Carg27816 vs. TAIR 10
Match: AT5G65320.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 43/120 (35.83%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 12  FFTSPSPFSSSRSWPFMASTDRSNLSNPNN---VIDVEVSMAECHARIKIRCRKFPKQLR 71
           FF  P   +++ +    AS+  S+  +      V DVEV+M E HA IK+  +  P+ L 
Sbjct: 176 FFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLF 235

Query: 72  KIVSGLHSLRLTVLHLNVSTAHEIALYSFTLKVEEDCGLC-SEEEISRGVHQLLCRIQEE 128
           KI++  +SL L+ LHLN++T+ +++L++F++KVE DC L  S  E++  VH+++ R+ +E
Sbjct: 236 KIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

The following BLAST results are available for this feature:

BLAST of Carg27816 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023938.1	2.7e-185	100.00	Transcription factor bHLH96 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961533.1	4.9e-62	97.69	transcription factor bHLH96-like [Cucurbita moschata]	[more]
XP_023520772.1	9.2e-53	90.00	transcription factor bHLH96-like [Cucurbita pepo subsp. pepo]	[more]
KAG6590375.1	4.7e-49	100.00	Transcription factor basic helix-loop-helix 96, partial [Cucurbita argyrosperma ...	[more]
XP_022968825.1	1.4e-45	94.17	transcription factor bHLH96-like [Cucurbita maxima]	[more]

BLAST of Carg27816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7T4	3.2e-16	42.61	Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1	[more]
Q9SK91	9.4e-16	41.44	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
Q56XR0	3.3e-13	35.86	Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1	[more]
Q9M128	6.3e-12	35.16	Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1	[more]
Q9FKQ6	1.8e-11	35.83	Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1	[more]

BLAST of Carg27816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HC29	2.4e-62	97.69	transcription factor bHLH96-like OS=Cucurbita moschata OX=3662 GN=LOC111462080 P...	[more]
A0A6J1HYA2	6.9e-46	94.17	transcription factor bHLH96-like OS=Cucurbita maxima OX=3661 GN=LOC111467945 PE=...	[more]
A0A0A0LW29	1.5e-32	62.50	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570740 PE=4 S...	[more]
A0A1S3BQS8	2.8e-31	58.57	transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103492192 PE=4 SV...	[more]
A0A6J1ERT7	1.0e-28	61.67	transcription factor bHLH94-like OS=Cucurbita moschata OX=3662 GN=LOC111437135 P...	[more]

BLAST of Carg27816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72210.1	2.3e-17	42.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G22490.1	6.7e-17	41.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46690.1	2.4e-14	35.86	beta HLH protein 71	[more]
AT4G01460.1	4.5e-13	35.16	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G65320.1	1.3e-12	35.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..296
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 8..129
None	No IPR available	PANTHER	PTHR11969:SF26	HELIX-LOOP-HELIX-LIKE PROTEIN	coord: 8..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27816-RA	Carg27816-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding