Carg27815 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27815
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	G-patch domain-containing protein
Location	Carg_Chr10: 10537109 .. 10541370 (-)
RNA-Seq Expression	Carg27815
Synteny	Carg27815

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGCATTAGCGCACCAGGTCCGTCGCAACGCAGCTTCTGCAGGTGCTCGTTGAAACAAACAACAATCCAATTCCCATCTTGTTGACCTAATTTCTCTCAACTTCAGGTTCTTTCCTCTTCTCATAATTCCATTGCATACTGCTCTACAATTTTCTTCAACGTTCTTTCTATGTCGTCCATGCCATTTGTTTTCTCTAGGGCTGTGGAACTTGATTGCTTTTCTGTTTCTTATTAAATTTGTTACTTTGATTAATTTCCATTTTCTGCTTCAGGAAAATTGTTACTTCTGATTCCTCCTTCATGGTAGTTGCAATTTTACTTCCGTCGGTCTATTCTATCGTGTTTATGATCGTGGATATGTACATCTCATTGTAGTCGACTAATCTTAAAGAGAATTTCTTGTGTAAGAATTGGACGGGGAACATGTTTTTTTGTATCTTATTCTTAGTAGTTGAAGCTCTTTCTTGTAGTTACTTAGAATTGGCTAGTTTTTTTTTCCTTAAGATCCGCTCGTTTTGGATTGATTTTGTGTGTGACCCGCTGTAGATTCGCTCATTTTCTCTATGAAATTATGGTCTCAGTTAGAGGAAAATAGGGATATTAGGGATCCACTGGGAATAGGATGACCAGACTGCCTAAGGACCTCCAACATTACAACCCTTCTTTCGTAGGTTATTTTCTTGAAAAAAAAAAAAACCTTCAAAGCTTCAAGTTTATTTAGCGAAGCTCAGAAGTATACTGAATGTTAACTATAATCAACCTCACAGTGAAATATGACAAACATTTTAGTCAACTGCTAAACATTATGCTTGCTTGAGATTATTTTCTATGTATATGTTTTACTTGCAACTTGCAAGTGCTAAGATTTTGGTTTCCAGGAATAACACAACCATGGGTTGTCCATTTGGCCATTTGGTCAACTCATGATGAATATTTTGAAATGCATTTATAAAATTGATCAGTTTTTTCATCTTTACAGTTTTTTCATTTAATCATTTTCTTTTTCATTTTTGAACTTTCTAACTTATTATTCTTGTGCTTCAAATTTCTATTTGTAATGTTTTTTAACCTAACCATGTGATATAGGTTGGACAAAATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGTATGAATGAGTTATCATGTCAAACTGGAAATACTCAACATACGTCTGTCTGACCCCTTGACTGACTGAAATCCTCTCCCTTTTCTTACAAAAAAGAACATGAATTACGGTTTTTGTGATATCTAATGTTTCACATATTTTTGTCTTCGGTGGGAATATTAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGTATTGTGTTTTTCTGGACATGAAATCCCACTCTGCTTATTCATTGTGCAATCTGTCTCTGATTTTATTATTTCATTATCTTTTCTCGTGAACCTTAGATTCTCTTAACTATTTATATAACTTTCTGAGTTTGTTTAAATTGCACACTTGATCATTAACGTATGAAAACATCTATTTCTGAGTTGGAACTTAAGCTCTAAAACTCCAGTGCGTTATGTCTTTTGGGCATGTTTACAAGTTTGTTTTTGAAAACAGTTTTTCTAGTATAAAAGCATAAATATATCCCCAAGTTAGATACCTTTTGAAAGTAGAAATCTAAAACTTAAATAGGAATATAAACAAAAAATCTCTTAATGGGTCAAAAAAAAATTTCAGCTATTATTCTTTTAATTAATGGTTTTCTGAATTTTAATCCAAAATTAATCCTTAATCGGTACTTGTTGGTCTAGCTTTTGAAAATAATAGGAACTCATTGTGTGTGTTTGTGTAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTATGTTATTTTTATCTTACAGTTGGTTGGGAAAAATGATAATTATTAGCTAAGACTTTGAAGTTGATGCTTTCCTCTTTCTGAAACTCATATCAAATAGCAGAAGGCAGCATATAGCATATATGCATGTCTTTTAGCGGGAATGGTATATCATAGGGGACCATCAACTTTTGGAAGGTCTTCAGATTTTCCTGCAGTTTTTATTACCTGGTGGCTTCTACTGCCCGCTTCGTGCACATTATTAAAATCCAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTTAAAGAAATACGCAAGGTTTTCTATTGTGATCTCTGCAACAAACAGTACAAGTTGGCTATGGAATTTGAAGCGCATCTCAGCTCATATGATCATAATCATAGAAAGGTAGGAAATTAAGCGTTTACTCATAAGTACTCCCTGTCTAGCAAAATCGTCATTCTCCTTTATTTCCTCTTCGAAGTTGCATCGAATCTAAAACATTGTTGGATGAGATTGCAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATGTATCTCCCTTTCCTCACTTTTTTTTTCTTTCAATAACTTCTTTTGTGATCCCATTTTAAGTTTCTCTTTATATTTTCATTTGTGTGATTCTGTTTACATTTTCTTTCATGTTAAAACTAGTGCGGATGCCCGTAAGAAGGAGCAGCAAATGCTGGAGCAACAAGAAAGATCAGCCACGGCCCCTGCTTCTACTGAAATTAGAAATGCTCTACATCACTTGCAGATCAGGATCAGCGGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGGTAAAGCTAAAGCTTAATGACGTTTTTGTGTTTTAAAACTAGTTTTGCACAATTGATTCTGAATATTTTGTTCTTTGTTTTTTACGAGTCCATTCATTCTGAAATTTGTTGATGCCTTGATTGATTGCTCATCGAAAGGTAATGAGTGATATTATCTGGTTCATCTTTTTGGAGTCAGGACTCAGAAGTAACCAGTTACCAGAAGGACCGGTTCCTATGGGAGCAAAGCACAGCAGTGTTTGGCATTATTGCTTGCCTCGTTCTCACGTTCGTTTCAAACATGTTGGGAACGAGTATCAACCATTGGCTTGGTCGTTCTGGTTTCGTCTTCTTGTTACCACAGAATAATAAGTATAGGGGAATTAATTGAAAGGGTATTCTCGTCTCTAATTTCTTGTGACTGATGTTATTGCAGAAGATTTTTGGTGGAGCCACAAAGAAACCCTAAAGTAGTAGCCCCTGTAGCTTCAGTTTTCGGGAATGATAGTGATGAGGAATAGCATTCAAAGAGTGCCCAAGTTGCTTTGCATCTTTTGTATGTGTAAGGAAACATCTTGAAGTTCATGTATTCTTATTATGGCAGTAGAGACATTATTGTTTAAACTTGCTTGCTCGCTCTTAGAATGTTAATTTTGAGATATCATATCGTGTGATTTAGTCTGATGAACAGATATCCATACAACTCTCTGTGCTATTGATATGTTCTGTTTATTATAACATCTTACTTACTGAAATGATGCTAGGAATCATTTTCAAGTGTACAATACCCCTCTGATCTGAAAGGGGTTTGGATGTTTGCTTTACTTTTTAGAAAATCAGTCCATTTTTAGGATGTTAAAAGGATGAAAGTCCACCTTTCGGGAAGCTCAACTCAAAGCCATAAGCTGAGCTTATGTTCATATGGGCAGACTTTAACTCCTAAACTGCATGCCCAAATTCCTTTCGAAACCTTGACTTTTGAGGCTAAGACCTGGGCCCTATCTGGCTCTTCAACAAGCCTATCTTTTCCTTCATGTCTATTCAATGTTTTGTCTTCCTTATCTCAACTTGTCTTCAATGCCCACTTCGCGTGGTGGTGTTGGACGACGTCCTCCTCGATCGCATCATGACACTCTTCTATATTGGCCCGCATGTGGTCGTATGTGCGTCTCTTGAGGGACGCCGCTTTGCTTGTCATGACGTGAGAGTCACAACCTACCCTCT

mRNA sequence

GTTGGCATTAGCGCACCAGGTCCGTCGCAACGCAGCTTCTGCAGGTGCTCGTTGAAACAAACAACAATCCAATTCCCATCTTGTTGACCTAATTTCTCTCAACTTCAGGTTGGACAAAATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTATGTTATTTTTATCTTACAGTTGGTTGGGAAAAATGATAATTATTAGCTAAGACTTTGAAGTTGATGCTTTCCTCTTTCTGAAACTCATATCAAATAGCAGAAGGCAGCATATAGCATATATGCATGTCTTTTAGCGGGAATGGTATATCATAGGGGACCATCAACTTTTGGAAGGTCTTCAGATTTTCCTGCAGTTTTTATTACCTGGTGGCTTCTACTGCCCGCTTCGTGCACATTATTAAAATCCAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTTAAAGAAATACGCAAGGTTTTCTATTGTGATCTCTGCAACAAACAGTACAAGTTGGCTATGGAATTTGAAGCGCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGGAGCAGCAAATGCTGGAGCAACAAGAAAGATCAGCCACGGCCCCTGCTTCTACTGAAATTAGAAATGCTCTACATCACTTGCAGATCAGGATCAGCGGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGAAGATTTTTGGTGGAGCCACAAAGAAACCCTAAAGTAGTAGCCCCTGTAGCTTCAGTTTTCGGGAATGATAGTGATGAGGAATAGCATTCAAAGAGTGCCCAAGTTGCTTTGCATCTTTTGTATGTGTAAGGAAACATCTTGAAGTTCATGTATTCTTATTATGGCAGTAGAGACATTATTGTTTAAACTTGCTTGCTCGCTCTTAGAATGTTAATTTTGAGATATCATATCGTGTGATTTAGTCTGATGAACAGATATCCATACAACTCTCTGTGCTATTGATATGTTCTGTTTATTATAACATCTTACTTACTGAAATGATGCTAGGAATCATTTTCAAGTGTACAATACCCCTCTGATCTGAAAGGGGTTTGGATGTTTGCTTTACTTTTTAGAAAATCAGTCCATTTTTAGGATGTTAAAAGGATGAAAGTCCACCTTTCGGGAAGCTCAACTCAAAGCCATAAGCTGAGCTTATGTTCATATGGGCAGACTTTAACTCCTAAACTGCATGCCCAAATTCCTTTCGAAACCTTGACTTTTGAGGCTAAGACCTGGGCCCTATCTGGCTCTTCAACAAGCCTATCTTTTCCTTCATGTCTATTCAATGTTTTGTCTTCCTTATCTCAACTTGTCTTCAATGCCCACTTCGCGTGGTGGTGTTGGACGACGTCCTCCTCGATCGCATCATGACACTCTTCTATATTGGCCCGCATGTGGTCGTATGTGCGTCTCTTGAGGGACGCCGCTTTGCTTGTCATGACGTGAGAGTCACAACCTACCCTCT

Coding sequence (CDS)

ATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTATGTTATTTTTATCTTACAGTTGGTTGGGAAAAATGA

Protein sequence

MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEMEETEADVKKREVCYFYLTVGWEK

Homology

[Close]

BLAST of Carg27815 vs. NCBI nr
Match: KAG7024047.1 (G patch domain-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 4.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREVCYFYLTVGWEK 150
           KLDVEMEETEADVKKREVCYFYLTVGWEK
Sbjct: 121 KLDVEMEETEADVKKREVCYFYLTVGWEK 149

[Close]

BLAST of Carg27815 vs. NCBI nr
Match: XP_023516878.1 (G patch domain-containing protein 8 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. NCBI nr
Match: XP_022961455.1 (G patch domain-containing protein 8 isoform X1 [Cucurbita moschata] >XP_022961456.1 G patch domain-containing protein 8 isoform X1 [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. NCBI nr
Match: XP_023516877.1 (G patch domain-containing protein 8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. NCBI nr
Match: XP_022961457.1 (G patch domain-containing protein 8 isoform X2 [Cucurbita moschata] >KAG6590514.1 G patch domain-containing protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. ExPASy Swiss-Prot
Match: Q9UKJ3 (G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.0e-11
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 51  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDD 110
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 111 FFTAEENIQRKKLDVEMEETE 131
            +  +   +R+ L+VE E+TE
Sbjct: 89  DYAEDATERRRVLEVEKEDTE 109

[Close]

BLAST of Carg27815 vs. ExPASy Swiss-Prot
Match: A2A6A1 (G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.0e-11
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 51  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDD 110
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 111 FFTAEENIQRKKLDVEMEETE 131
            +  +   +R+ L+VE E+TE
Sbjct: 89  DYAEDATERRRVLEVEKEDTE 109

[Close]

BLAST of Carg27815 vs. ExPASy Swiss-Prot
Match: Q9SLC6 (Septin and tuftelin-interacting protein 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=STIPL2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 62  SSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIG----KQEEDDFFTAEENI 121
           S  +G +LL+KMG+KG+GLGK++QGI+ PI+  +R   +G+G    K++    F     +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162

Query: 122 QRKKLDVEMEETE 131
           + KK  V +  +E
Sbjct: 163 EEKKKSVVVTVSE 175

[Close]

BLAST of Carg27815 vs. ExPASy Swiss-Prot
Match: Q6DF57 (G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 48  LDNVEQASLDTQLT----SSNVGYRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGI 107
           L +VE+   DT+L     + N G+ LLQKMG+ KG+ LGK   GI+EPI   I+  + GI
Sbjct: 52  LKDVEKEKRDTKLNEALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGI 111

Query: 108 GKQEEDDFFTAEENIQRKKLDVEM----EETEAD 133
           G  EE     AEEN++  +  ++M    EE  AD
Sbjct: 112 G-HEEMKKRKAEENLESYRRKIQMRKHDEEQAAD 144

[Close]

BLAST of Carg27815 vs. ExPASy Swiss-Prot
Match: Q6DGZ0 (G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-06
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 53  QASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFF 112
           +A+L + + S N G+ LLQKMG+K G+GLGK+  G +EP+   I+  + GIG  EE    
Sbjct: 61  EAALQSSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIG-MEEVKKR 120

Query: 113 TAEENIQRKKLDVEMEE 129
            A+E +Q  +  V M++
Sbjct: 121 KADEELQNYRRKVHMKQ 136

[Close]

BLAST of Carg27815 vs. ExPASy TrEMBL
Match: A0A6J1HAE8 (G patch domain-containing protein 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462032 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. ExPASy TrEMBL
Match: A0A6J1HA90 (G patch domain-containing protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462032 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. ExPASy TrEMBL
Match: A0A6J1HY59 (G patch domain-containing protein 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467909 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNN NKAYA+EQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNRNKAYAREQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. ExPASy TrEMBL
Match: A0A6J1HVU1 (G patch domain-containing protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467909 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNN NKAYA+EQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNRNKAYAREQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVEMEETEADVKKREV
Sbjct: 121 KLDVEMEETEADVKKREV 138

[Close]

BLAST of Carg27815 vs. ExPASy TrEMBL
Match: A0A5D3CGE1 (G patch domain-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004660 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.8e-63
Identity = 124/138 (89.86%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           M+ R +SSRLETNNP+K YA+EQ+SLGDDFIDDFRLPINH+PTENVDLDNVEQASLDTQL
Sbjct: 27  MEYRGFSSRLETNNPSKGYAREQESLGDDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 86

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSG+RDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 87  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 146

Query: 121 KLDVEMEETEADVKKREV 139
           KLDVE+EETE   KKREV
Sbjct: 147 KLDVEVEETEEHAKKREV 164

[Close]

BLAST of Carg27815 vs. TAIR 10
Match: AT5G26610.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 94/142 (66.20%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREV 139
           IQRKKLD+E+EETE   KKREV
Sbjct: 121 IQRKKLDIEIEETEEIAKKREV 142

[Close]

BLAST of Carg27815 vs. TAIR 10
Match: AT5G26610.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 94/142 (66.20%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREV 139
           IQRKKLD+E+EETE   KKREV
Sbjct: 121 IQRKKLDIEIEETEEIAKKREV 142

[Close]

BLAST of Carg27815 vs. TAIR 10
Match: AT5G26610.3 (D111/G-patch domain-containing protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 94/142 (66.20%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREV 139
           IQRKKLD+E+EETE   KKREV
Sbjct: 121 IQRKKLDIEIEETEEIAKKREV 142

[Close]

BLAST of Carg27815 vs. TAIR 10
Match: AT2G42330.1 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 62  SSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIG----KQEEDDFFTAEENI 121
           S  +G +LL+KMG+KG+GLGK++QGI+ PI+  +R   +G+G    K++    F     +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162

Query: 122 QRKKLDVEMEETE 131
           + KK  V +  +E
Sbjct: 163 EEKKKSVVVTVSE 175

[Close]

BLAST of Carg27815 vs. TAIR 10
Match: AT2G42330.2 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 62  SSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIG----KQEEDDFFTAEENI 121
           S  +G +LL+KMG+KG+GLGK++QGI+ PI+  +R   +G+G    K++    F     +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162

Query: 122 QRKKLDVEMEETE 131
           + KK  V +  +E
Sbjct: 163 EEKKKSVVVTVSE 175

The following BLAST results are available for this feature:

BLAST of Carg27815 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024047.1	4.9e-78	100.00	G patch domain-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516878.1	8.4e-70	100.00	G patch domain-containing protein 8 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022961455.1	8.4e-70	100.00	G patch domain-containing protein 8 isoform X1 [Cucurbita moschata] >XP_02296145...	[more]
XP_023516877.1	8.4e-70	100.00	G patch domain-containing protein 8 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961457.1	8.4e-70	100.00	G patch domain-containing protein 8 isoform X2 [Cucurbita moschata] >KAG6590514....	[more]

BLAST of Carg27815 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UKJ3	7.0e-11	44.44	G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2	[more]
A2A6A1	7.0e-11	44.44	G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=...	[more]
Q9SLC6	1.8e-06	36.99	Septin and tuftelin-interacting protein 1 homolog 2 OS=Arabidopsis thaliana OX=3...	[more]
Q6DF57	2.3e-06	41.49	G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 P...	[more]
Q6DGZ0	5.2e-06	40.26	G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=...	[more]

BLAST of Carg27815 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAE8	4.1e-70	100.00	G patch domain-containing protein 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HA90	4.1e-70	100.00	G patch domain-containing protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HY59	1.0e-68	98.55	G patch domain-containing protein 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HVU1	1.0e-68	98.55	G patch domain-containing protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3CGE1	4.8e-63	89.86	G patch domain-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Carg27815 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26610.1	1.0e-44	66.20	D111/G-patch domain-containing protein	[more]
AT5G26610.2	1.0e-44	66.20	D111/G-patch domain-containing protein	[more]
AT5G26610.3	1.0e-44	66.20	D111/G-patch domain-containing protein	[more]
AT2G42330.1	1.3e-07	36.99	GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domai...	[more]
AT2G42330.2	1.3e-07	36.99	GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domai...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 60..105 e-value: 3.5E-17 score: 73.1
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 63..103 e-value: 5.8E-16 score: 58.1
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 62..107 score: 16.69919
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR47251	FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED	coord: 5..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27815-RA	Carg27815-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding