Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTCCGTCCGTCCATCCATCCGTCCGTCCATCCATCCATCCATTGTTTCTCTTTCTCTCTCTCTCTCTCATTTCTCTCATTTTCCTGTTGCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA
mRNA sequence
ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA
Coding sequence (CDS)
ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA
Protein sequence
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMATMIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG
Homology
BLAST of Carg27781 vs. NCBI nr
Match:
KAG6607636.1 (hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037240.1 hypothetical protein SDJN02_00863, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 849.4 bits (2193), Expect = 1.4e-242
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET
Sbjct: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT
Sbjct: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
Query: 361 HEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG 420
HEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG
Sbjct: 361 HEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG 420
Query: 421 SALVATLVIAVFSLVKSKKREKNMRG 447
SALVATLVIAVFSLVKSKKREKNMRG
Sbjct: 421 SALVATLVIAVFSLVKSKKREKNMRG 446
BLAST of Carg27781 vs. NCBI nr
Match:
XP_023521223.1 (neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 814.7 bits (2103), Expect = 4.0e-232
Identity = 428/446 (95.96%), Postives = 438/446 (98.21%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
+TINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 ITINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKLEEGILGVGIQEVKE+EAG+ATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEQEAGKATFESQDSEAEAIPHTPTDLETPETGKETKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
IEDTHGNGE GGENAK+EAFSK+EYAAETTPEEIEKLKGNEMEDTDGGSNDYSESE+LET
Sbjct: 181 IEDTHGNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
GATKATEYEGTKEN+NGQIKVPKVT EGIEVAEGTSQETANHQKEKEGNA+EHNGDMAT
Sbjct: 241 GATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQKEKEGNAKEHNGDMAT 300
Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
MIKKKPDVKTQ QASIDQEQENFKRNRHTR ELGKPETYRNT +LKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQSQASIDQEQENFKRNRHTRAELGKPETYRNTRELKEPEDIEIPYLQSPA 360
Query: 361 HEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG 420
HEHEEKEVDQKGKS QTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG
Sbjct: 361 HEHEEKEVDQKGKSSQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAG 420
Query: 421 SALVATLVIAVFSLVKSKKREKNMRG 447
SALVA+LVI VFSLVKSKKREKNMRG
Sbjct: 421 SALVASLVIVVFSLVKSKKREKNMRG 446
BLAST of Carg27781 vs. NCBI nr
Match:
XP_022926215.1 (neurofilament medium polypeptide-like [Cucurbita moschata])
HSP 1 Score: 670.6 bits (1729), Expect = 9.2e-189
Identity = 356/388 (91.75%), Postives = 366/388 (94.33%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
+TINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 ITINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
IEDTHGNGE GGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSE E+LET
Sbjct: 181 IEDTHGNGEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSECEQLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMA 300
GATKATEYEGTKEN+NGQIKVPKVT EGIEVAEGTSQETANHQ+EK EG AEEHNGD+A
Sbjct: 241 GATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEHNGDIA 300
Query: 301 TMIKKKPDVKTQPQASIDQ-----EQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIP 360
TMIKKK DVKTQPQASIDQ EQENFKRNRHTR ELGK ETYRNT +LKEPEDIEIP
Sbjct: 301 TMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTRELKEPEDIEIP 360
Query: 361 YLQSPAHEHEEKEVDQKGKSFQTKDETK 383
YLQSPAHEHEEKE+ + K+ Q+ TK
Sbjct: 361 YLQSPAHEHEEKEISDEKKTTQSGHTTK 388
BLAST of Carg27781 vs. NCBI nr
Match:
XP_022981685.1 (uncharacterized protein LOC111480753 [Cucurbita maxima])
HSP 1 Score: 664.8 bits (1714), Expect = 5.1e-187
Identity = 344/367 (93.73%), Postives = 357/367 (97.28%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
+TINGSGT+IEISWGQPVQKMEITR TYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 ITINGSGTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKL EGILGVGI+ VKE+EAG+ATFESQDSEAEAIPH PTDLETPETGK+TKL
Sbjct: 121 SILKILMPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
+EDTHGNGE GGENAK+EAFSK+EYAAETTPEEIEKLKGNEMEDTDGGSNDYSESE+LET
Sbjct: 181 VEDTHGNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
GATKATEYEGTKENINGQI+VPKVT EGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT
Sbjct: 241 GATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
MIKKKPDVKTQPQASIDQEQENFK+NRHTR LGKPETYRNT +LKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQPQASIDQEQENFKQNRHTRAGLGKPETYRNTRELKEPEDIEIPYLQSPA 360
Query: 361 HEHEEKE 368
HEHEEKE
Sbjct: 361 HEHEEKE 367
BLAST of Carg27781 vs. NCBI nr
Match:
XP_022143634.1 (uncharacterized protein LOC111013495 [Momordica charantia])
HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-126
Identity = 281/466 (60.30%), Postives = 336/466 (72.10%), Query Frame = 0
Query: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGS 66
FELKISP+ S FEL L + T + F+S+ETNSMF+LTAKL GF+R+DI +TING+
Sbjct: 38 FELKISPS---SSFSNFELQLARGTPS-PFWSNETNSMFILTAKLTGFSREDIGITINGT 97
Query: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
GTRIEI WGQPVQ+MEITRW YKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILKI+
Sbjct: 98 GTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILKIV 157
Query: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHG 186
MPKL +GILGVGI+EVKE++ GE ESQDSEAE IP E ETG+ETK +ED
Sbjct: 158 MPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEV---TEGFETGRETKFVEDA-A 217
Query: 187 NGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKAT 246
NG G NA E K EY AETT EE EKLKG+EME DG SN YSESE+ E T+
Sbjct: 218 NGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEHIDGVSNHYSESEKSEKLTTEIA 277
Query: 247 EYEGTKEN---INGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMATMI 306
E +N ++ +I +PKV +GIE+ EGTS+ TANHQKEK E N+E HNG +ATM
Sbjct: 278 EAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPNSEAHNGSIATMT 337
Query: 307 KKKPDVKTQPQASIDQE----------QENFKRNRHTRV--ELGKPETYRNTWKLK---- 366
K+PD+K Q QA++D++ Q N K ++ + G ETYR+ W+ K
Sbjct: 338 NKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKETYRSAWESKEFET 397
Query: 367 --EPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAK 426
EPE I PYLQSP HEHEEK V+Q+GKSFQT+DE KEAREE SPQ+ H+ S+KEAK
Sbjct: 398 NNEPEYIASPYLQSPEHEHEEKGVNQQGKSFQTQDEIKEAREESGSPQREKHEQSTKEAK 457
Query: 427 QEK----KQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG 447
QEK KQFKMR PII+AGSAL+A+L I VF+ V+SKKREKNMRG
Sbjct: 458 QEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Carg27781 vs. ExPASy TrEMBL
Match:
A0A6J1EKH3 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433395 PE=3 SV=1)
HSP 1 Score: 670.6 bits (1729), Expect = 4.5e-189
Identity = 356/388 (91.75%), Postives = 366/388 (94.33%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
+TINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 ITINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
IEDTHGNGE GGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSE E+LET
Sbjct: 181 IEDTHGNGEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSECEQLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMA 300
GATKATEYEGTKEN+NGQIKVPKVT EGIEVAEGTSQETANHQ+EK EG AEEHNGD+A
Sbjct: 241 GATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEHNGDIA 300
Query: 301 TMIKKKPDVKTQPQASIDQ-----EQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIP 360
TMIKKK DVKTQPQASIDQ EQENFKRNRHTR ELGK ETYRNT +LKEPEDIEIP
Sbjct: 301 TMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTRELKEPEDIEIP 360
Query: 361 YLQSPAHEHEEKEVDQKGKSFQTKDETK 383
YLQSPAHEHEEKE+ + K+ Q+ TK
Sbjct: 361 YLQSPAHEHEEKEISDEKKTTQSGHTTK 388
BLAST of Carg27781 vs. ExPASy TrEMBL
Match:
A0A6J1J0B1 (uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753 PE=3 SV=1)
HSP 1 Score: 664.8 bits (1714), Expect = 2.4e-187
Identity = 344/367 (93.73%), Postives = 357/367 (97.28%), Query Frame = 0
Query: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1 MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
Query: 61 VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
+TINGSGT+IEISWGQPVQKMEITR TYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61 ITINGSGTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
SILKILMPKL EGILGVGI+ VKE+EAG+ATFESQDSEAEAIPH PTDLETPETGK+TKL
Sbjct: 121 SILKILMPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKL 180
Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
+EDTHGNGE GGENAK+EAFSK+EYAAETTPEEIEKLKGNEMEDTDGGSNDYSESE+LET
Sbjct: 181 VEDTHGNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQLET 240
Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
GATKATEYEGTKENINGQI+VPKVT EGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT
Sbjct: 241 GATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
MIKKKPDVKTQPQASIDQEQENFK+NRHTR LGKPETYRNT +LKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQPQASIDQEQENFKQNRHTRAGLGKPETYRNTRELKEPEDIEIPYLQSPA 360
Query: 361 HEHEEKE 368
HEHEEKE
Sbjct: 361 HEHEEKE 367
BLAST of Carg27781 vs. ExPASy TrEMBL
Match:
A0A6J1CPW6 (uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013495 PE=3 SV=1)
HSP 1 Score: 464.5 bits (1194), Expect = 4.9e-127
Identity = 281/466 (60.30%), Postives = 336/466 (72.10%), Query Frame = 0
Query: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGS 66
FELKISP+ S FEL L + T + F+S+ETNSMF+LTAKL GF+R+DI +TING+
Sbjct: 38 FELKISPS---SSFSNFELQLARGTPS-PFWSNETNSMFILTAKLTGFSREDIGITINGT 97
Query: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
GTRIEI WGQPVQ+MEITRW YKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILKI+
Sbjct: 98 GTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILKIV 157
Query: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHG 186
MPKL +GILGVGI+EVKE++ GE ESQDSEAE IP E ETG+ETK +ED
Sbjct: 158 MPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEV---TEGFETGRETKFVEDA-A 217
Query: 187 NGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKAT 246
NG G NA E K EY AETT EE EKLKG+EME DG SN YSESE+ E T+
Sbjct: 218 NGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEHIDGVSNHYSESEKSEKLTTEIA 277
Query: 247 EYEGTKEN---INGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMATMI 306
E +N ++ +I +PKV +GIE+ EGTS+ TANHQKEK E N+E HNG +ATM
Sbjct: 278 EAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPNSEAHNGSIATMT 337
Query: 307 KKKPDVKTQPQASIDQE----------QENFKRNRHTRV--ELGKPETYRNTWKLK---- 366
K+PD+K Q QA++D++ Q N K ++ + G ETYR+ W+ K
Sbjct: 338 NKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKETYRSAWESKEFET 397
Query: 367 --EPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAK 426
EPE I PYLQSP HEHEEK V+Q+GKSFQT+DE KEAREE SPQ+ H+ S+KEAK
Sbjct: 398 NNEPEYIASPYLQSPEHEHEEKGVNQQGKSFQTQDEIKEAREESGSPQREKHEQSTKEAK 457
Query: 427 QEK----KQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG 447
QEK KQFKMR PII+AGSAL+A+L I VF+ V+SKKREKNMRG
Sbjct: 458 QEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Carg27781 vs. ExPASy TrEMBL
Match:
A0A5A7UWU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00820 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 2.3e-44
Identity = 173/452 (38.27%), Postives = 229/452 (50.66%), Query Frame = 0
Query: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFA---RDDIVV 64
S FELKI PT +DD SSTFEL L + ++T L +P FA R+ I
Sbjct: 51 SDFELKIKPTIDDDTSSTFELQLAEGSAT-------------LMKPIPCFATLVRNVIGT 110
Query: 65 TINGSGTRI---EISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYND 124
+ S + ++++G V E+ ++ T + + D V E+ + +
Sbjct: 111 LVRKSDVTLPPQQLAYG--VWFSEVLKYLTMLSMSTHFGVEPIKDSDQVWPSEVPRSNDR 170
Query: 125 EKSILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKET 184
++S L++ KL E PT L ++
Sbjct: 171 DRSCLRLW--KLAE--------------------------------RPTWLTVIMKRRKP 230
Query: 185 KLIEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERL 244
L+ + +L +NA+ E K+EY AE P+EIEKLKG+EM++
Sbjct: 231 MLLME-----QLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDE-------------- 290
Query: 245 ETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDM 304
I VPK+ EGIEVAE TS+ TA+H+KE + NAE NGD
Sbjct: 291 -------------------DIDVPKIRSVEGIEVAEVTSKGTASHKKETQTNAEARNGDK 350
Query: 305 ATMIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQS 364
ATMI KKP VKTQ QASID+E EL + ET KEPEDI PYLQ
Sbjct: 351 ATMINKKPYVKTQSQASIDREAR----------ELKELETD------KEPEDIGSPYLQR 394
Query: 365 PAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEK----KQFKMRI 424
PA++H+EK D+KG+SFQTK E K+AREEC S TH+DSSKEAKQEK KQ KMR
Sbjct: 411 PANQHDEKGADRKGRSFQTKYEVKDAREECKS----THEDSSKEAKQEKKQDSKQLKMRT 394
Query: 425 PIIVAGSALVATLVIAVFSLVKSKKREKNMRG 447
II+AGSAL+A+LV F+LVKS K EKN++G
Sbjct: 471 SIIIAGSALLASLVTVAFNLVKS-KTEKNVKG 394
BLAST of Carg27781 vs. ExPASy TrEMBL
Match:
A0A5D3CSD6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00020 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 5.7e-43
Identity = 132/262 (50.38%), Postives = 160/262 (61.07%), Query Frame = 0
Query: 189 ELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKATEY 248
+L +NA+ E K+EY AE P+EIEKLKG+EM++
Sbjct: 33 QLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDE------------------------ 92
Query: 249 EGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMATMIKKKPDV 308
I VPK+ EGIEVAE TS+ TA+H+KE + NAE NGD ATMI KKP V
Sbjct: 93 ---------DIDVPKIRSVEGIEVAEVTSKGTASHKKETQTNAEARNGDKATMINKKPYV 152
Query: 309 KTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEV 368
KTQ QASID+E EL + ET KEPEDI PYLQ PA++H+EK
Sbjct: 153 KTQSQASIDREAR----------ELKELETD------KEPEDIGSPYLQRPANQHDEKGA 212
Query: 369 DQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEK----KQFKMRIPIIVAGSALV 428
D+KG+SFQTK E K+AREEC S TH+DSSKEAKQEK KQ KMR II+AGSAL+
Sbjct: 213 DRKGRSFQTKYEVKDAREECKS----THEDSSKEAKQEKKQDSKQLKMRTSIIIAGSALL 240
Query: 429 ATLVIAVFSLVKSKKREKNMRG 447
A+LV F+LVKS K EKN++G
Sbjct: 273 ASLVTVAFNLVKS-KTEKNVKG 240
BLAST of Carg27781 vs. TAIR 10
Match:
AT1G76770.1 (HSP20-like chaperones superfamily protein )
HSP 1 Score: 111.7 bits (278), Expect = 1.5e-24
Identity = 76/211 (36.02%), Postives = 112/211 (53.08%), Query Frame = 0
Query: 9 LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
LKI+ T+ DD SS+ + + + + H S ETNS+F L L GF +D I + IN G
Sbjct: 7 LKITRTK-DDVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIEINKEGN 66
Query: 69 RIEISWGQPVQKMEITRWT-YKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
I+IS + V++M + +W +KKETE + FKK+FRIPD VILD+IKA +N+E L + M
Sbjct: 67 LIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDGTLTVTM 126
Query: 129 PKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHGN 188
PK +GI G+ I+E E+E + + +E + P ET + + E
Sbjct: 127 PKKVKGITGLKIEEEDEEEEMKEPIVEEKTEEKTEPEEEIKEETKPEEENEEAEEPQREE 186
Query: 189 GELGGENAKREAFSKMEYAAETTPEEIEKLK 219
E E R+ K E E P + + K
Sbjct: 187 EEEVVEEGTRDHEGKKEEEIEDKPRKKRRKK 216
BLAST of Carg27781 vs. TAIR 10
Match:
AT1G76780.1 (HSP20-like chaperones superfamily protein )
HSP 1 Score: 55.8 bits (133), Expect = 1.0e-07
Identity = 103/352 (29.26%), Postives = 161/352 (45.74%), Query Frame = 0
Query: 81 MEITRW-TYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILMPKLEEGILGVGI 140
M + RW ++KE E FKK+FRIPD V LD+IKA ++D+ + L I MPK +GI G I
Sbjct: 1 MVMIRWMAWRKEVEFSVFKKVFRIPDTVDLDKIKARFDDDDATLTITMPKRVKGISGFKI 60
Query: 141 QEVKEKEAGEATFESQD-SEAEAIPHTPT-DLETPETGKETKL---IEDTHGNGELGGEN 200
+E +E+E E E D SEAE T +L+ K ++ IE+ G + E+
Sbjct: 61 EEEEEEEEEEE--ERVDVSEAEHKEETEKGELKDDYLEKSHQIDERIEEEKGLADSNKES 120
Query: 201 A-----KREAFSKMEYAAETTPEEIE---KLKGNEMEDTDG-GSNDYSESERLE------ 260
K E +T EE E +L E +D+D GS + E E E
Sbjct: 121 VDSSLRKPPDIEGRECHEQTRHEEQENNKQLVQAESDDSDDFGSRAFEEIEEQESDVLDR 180
Query: 261 TGATKATEYEGTKENINGQIKVPKV----TITEGIEVAEGTSQETANHQKEKEGNAEEHN 320
T + A E E T + +G KV + E +++E ET+ H+K+K ++ N
Sbjct: 181 TSTSGAMEKEMTDDVGDGLRKVQGIEEPERHNEESKISEMVDGETSGHEKKKVVKMDKKN 240
Query: 321 GDMATMIKK------KPDV-KTQ-----PQASIDQEQENFKRNRHTRVELGKPETYRNTW 380
D+ + +P++ +TQ A ++ E F+ ++ E+ K NT
Sbjct: 241 RDVKEEVDGAMGEGFRPNIDRTQVVGDDEIAETEKNDEEFESDKLEADEVDKINEGGNTK 300
Query: 381 KLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVT 396
+ ED + LQ +H + +QKG S K+E + E +P+ T
Sbjct: 301 VRRHSEDRNLIKLQEKEEQHSK---EQKGHS---KEENMKELVEEKTPEAET 344
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6607636.1 | 1.4e-242 | 100.00 | hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023521223.1 | 4.0e-232 | 95.96 | neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087... | [more] |
XP_022926215.1 | 9.2e-189 | 91.75 | neurofilament medium polypeptide-like [Cucurbita moschata] | [more] |
XP_022981685.1 | 5.1e-187 | 93.73 | uncharacterized protein LOC111480753 [Cucurbita maxima] | [more] |
XP_022143634.1 | 1.0e-126 | 60.30 | uncharacterized protein LOC111013495 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EKH3 | 4.5e-189 | 91.75 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433... | [more] |
A0A6J1J0B1 | 2.4e-187 | 93.73 | uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753... | [more] |
A0A6J1CPW6 | 4.9e-127 | 60.30 | uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5A7UWU5 | 2.3e-44 | 38.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CSD6 | 5.7e-43 | 50.38 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT1G76770.1 | 1.5e-24 | 36.02 | HSP20-like chaperones superfamily protein | [more] |
AT1G76780.1 | 1.0e-07 | 29.26 | HSP20-like chaperones superfamily protein | [more] |