Carg27721 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27721
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	THUMP domain-containing protein 1 homolog
Location	Carg_Chr11: 4422541 .. 4426471 (-)
RNA-Seq Expression	Carg27721
Synteny	Carg27721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGACTTGGAACTCTTGTGCTCTCTGCAATGGCCGCTGAGAACAAACCCTCCACCGCCGGCAAGAAACGGAAGCAGCGCTATCGTCCCAACAATGTTTTCTCTCGATCTTTTCTTCTTCTTCCTTTCTCCTCTTCTTTTTACCTTCTCTATTCTATTGTCGATTTACTCAATTCCTTCTAATTTTCTCGTTGTTCTCCTTCCTCAGAAACCAGTGAAGAAGAAGGGCCATTACCCGTTACGCCCAGGAGTCCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAGCGGCAAGCCTCCATTGAAGCTATCAATGTTATCGACTCTTATGACTTTGCCCCTTTTTACTGCTTCTGGGTTATGTTTTGTTGGGATTGAGATGAGTATTTCAATGTATTACGTTTTGATTGTCATTGAACTGTGTTCCTATTGCCTTATTGTGGAAGTCATGGGGGAATTGAATCATTCCTTTTGTTTTGTTATAAATTTCCGAGATGAAACTTAGAGAGATTTGGGGGCAGATAATGTAAAGCGCGGTACCCAATGATTCAAAGATGTTTGATGTGCGAAGGGTCTATTTGTAAAGCTTATTAGTGAGTAATGAATACATCCAAAGTTATCTATGATAGACGTAAAGGGAAAATATTACATAGGGAATTTTTTAAGCTCATCTCAAAGTAATTCTGGTTTTTGTCAATGTTATGTCTAATTGTTCGTTGTAGGATTATTAATTGCTCATTCTTTAAATGCTATACATATATGTTTGTCCTGTTTAAAGGCTTTACTGTTGATTTCTTTACAAGAACGTTGATTTTTACGTATTCGTTTTCTTTATTCCATTTTCAGTTTTTTGACGAGTTAGTCCATGGAAAGGGTTCTGGTGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAAAAAATTAAGTTTTCAGATTCTGAATCTTCTGGTTCTGATGATGATGGTGATGGGGAAGAGGAGGAGGAGGAGGTGGGGGGTGAGAACGAGGACGAGAACAAGGAGGTTCCCGATGAAGAAAGCAAGTCTAAGTCTCCTAAGGAGCAAAATGATCCTTGCAATGAAAATGAAACAACGGACGTTCCAGATCCTCATCAAGGGGACACTGTAGCCACCGAAAGTCGAACAGAGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCAGAAGTTCCATCGGAGGAAGTTGAGGAGCCGCCGAAAAAGAAACACTGCATTGAAGCAGATGCATCAAAAAGTATTGTTAAGGAGAAGGAGAAATCCATTGATCAATTGATTGAAGCTGAACTTCAGGAACTGGGAGATAAAAGCAAGGTCAGTGATAAAATTTCAACGTTAAGGTTATTCTTTTTCTGATCTTACAATTATTAGCTTTGTAGGAGTTATGATTATGATTTACAAGCTATTTTAAACATCCAGACTGATAATTGATCCTTTGTTTTCCAATCTTCTTATCATGAAATGTGGTTCAGAGACGTTTTTTCAACCTTGATTCGGGGTGCAATGGTGTTGTCTTTATCCAAATGCGGAAGAATGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATATCAAGGTTTGCATATAGTTCTTGAATTTCTATAAGGAATGAAGCATGAAGAAGTTCATATACTGGATCACTAAAAGGCTTTATTGTATATTTGATATATCCCAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGTGGAGGAGATCTCCAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGGTATATCCCTACTTTTACGTTCCCTTTTAATCGTCTCCCAATTTCAATACCATGCTTTAATCGTCTCCCAATTACCATGCTGTCAGTTCCTTTGTGATATAGGAACAACTATAGATTCAATGACTATTTGAATACGATCACTTGACTCTAATATGAGTTGGAAATAGTTTCGCTGATTTCTTGATGGCTTATTCTAAGATTGAGGACAATTGTTTCAAATTTTGTTTCTAGATTTGTGCTTGGTTTTGTGACTGGAGTTCTAGGCCACATATCCAATTCACTTAAGACTTGGAGAGCTAAAGGCGTCATTGAGTGAAAAGTAGAGTAGGTTGTATATACTTGTAACTGTTTAAAGCTGTTGTGATGTAGTCATCAACCGGGTAGAAGATAAGGAGAGTCCATGGCTATTCATCTTATAATGGCTGTGGTTTTCTAGTTTTTGCAGTTTCGATATCTCTGACCCCACACGTTTTGACACTTCCTAGTCGCATGATGAAATTGCAACCTCCAGTTGGTAAAGAACATGGAAGAAAATTCAACTAAGTGACTATAATCGATGATTTATTGATTTATAAAAGAAACTATCCTATAAATACTTTACAAGAAGCGAACATGAATCTCGTTTCCTAGTGACTTGACATGAGGATGCTATTATTAGAATGATCACAAATTAATATTTCAATTTTTTTTTATCTTTCTCGCAGTTTGCAGTATTATACGAGGCCCGTTCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAAGCTGTTCCTGAGCCTCATAAAGTTGATTTGAACAATCCTGAAAAAACCATTGTGGTTGAGATTGTCAAGGTGAGGAACTCTGTTCTTGGGAAGTAAATAGTCTAGAGATTTCTCCTTAGACCTGATTCAGTATATAGAATGTTTGCCATAGCCACCCACTTGGTGGGGTATGTGCCGCTTTAAATTTTGTGTTTAAAATATTCTCTGCTAGCTGAAGCTATATGCATCTTAAACCTTGCTTTGAGGATTTAATCTAATTTTGGTTTCAAACTTGACTTCTTTTACCAAATTTTGATTGTTTTAGATACATATACTGCCTGAGGTTAAATCTGCTGGGAAGTAACTGAAGTTCATACTTTTATTATCCTTACCCAAGTAAATGGAAAGTGTTGTAGATCCTCTCAAAGTCCTTGCAGAACTAGTTTTATCTGCAAGTTAGTCTGGGAGGCAAAAAACTATGGCTTTAGAACTTGAAGAGTTGGCTGAACCATTGGTTTGGAACGTGTTTGGTGAGACTGGATGCTAATAGAATAGGTTGTGTAACAGCCGAAGCCCTCCGCTAGTAGATATTGTCCTCTTTGGACTTTCTCTTTCGGACTTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTCATTCTCCTCCCCCACCGATGTGGAATCTCACAGGCGGCCTCGGATGGAAGTTGACAACCCAAAATAATGTTTGATGATTGATGATATGTGTTCTTTGTTATGAAATGTGATTGGTCTGGAATGTGGACAATAACTGTAATCTTACATCGTGTTTTTTGTTGGGTTATTCAGACAATTTGCTTGATTGGAGTAGTGGAGAAGTACAAGGAGTTATCCAAGTACAACCTAAGGCAGCTGACATCAAGAAAGCAATAGAATAGGTTAGTTTAGGTTATCTGGTTTTCATGTCTGTTTCAGCTTTGGTCGGACGGACACCTTTTAACTTTGAAATGTATTAATCTGCATGTTTCTTGATGTGTAGGGTTAGTTTAGTTTAGATTGGAGTATCAAGTATTAATATATGGTTTTAAATTTCATAATATGCTTATACTGTTCTGTTGAACTTCTATTGAGTTTGATGGAGGAAGATGATTGAAAGATTCATCATATCTGTTGTTGGTTTGTATGGCTTGCATTTACATGGAGTTAAATATTTTTTTAAATCAATGACTCGAACTCGAACACAGTTTCTTAAATAAAATATTAGAAATCAAAATGAAAAAGATAACTCATGAGATCCCATGAGTATCCAACAC

mRNA sequence

ACGACTTGGAACTCTTGTGCTCTCTGCAATGGCCGCTGAGAACAAACCCTCCACCGCCGGCAAGAAACGGAAGCAGCGCTATCGTCCCAACAATAAACCAGTGAAGAAGAAGGGCCATTACCCGTTACGCCCAGGAGTCCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAGCGGCAAGCCTCCATTGAAGCTATCAATGTTATCGACTCTTATGACTTTGCCCCTTTTTACTGCTTCTGGGTTATGATTATTAATTGCTCATTCTTTAAATGCTATACATATATGTTTGTCCTGTTTAAAGGCTTTACTGTTGATTTCTTTACAAGAACGTTGATTTTTACGTATTCGTTTTCTTTATTCCATTTTCAGTTTTTTGACGAGTTAGTCCATGGAAAGGGTTCTGGTGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAAAAAATTAAGTTTTCAGATTCTGAATCTTCTGGTTCTGATGATGATGGTGATGGGGAAGAGGAGGAGGAGGAGGTGGGGGGTGAGAACGAGGACGAGAACAAGGAGGTTCCCGATGAAGAAAGCAAGTCTAAGTCTCCTAAGGAGCAAAATGATCCTTGCAATGAAAATGAAACAACGGACGTTCCAGATCCTCATCAAGGGGACACTGTAGCCACCGAAAGTCGAACAGAGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCAGAAGTTCCATCGGAGGAAGTTGAGGAGCCGCCGAAAAAGAAACACTGCATTGAAGCAGATGCATCAAAAAGTATTGTTAAGGAGAAGGAGAAATCCATTGATCAATTGATTGAAGCTGAACTTCAGGAACTGGGAGATAAAAGCAAGAGACGTTTTTTCAACCTTGATTCGGGGTGCAATGGTGTTGTCTTTATCCAAATGCGGAAGAATGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATATCAAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGTGGAGGAGATCTCCAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGTTTGCAGTATTATACGAGGCCCGTTCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAAGCTGTTCCTGAGCCTCATAAAGTTGATTTGAACAATCCTGAAAAAACCATTGTGGTTGAGATTGTCAAGACAATTTGCTTGATTGGAGTAGTGGAGAAGTACAAGGAGTTATCCAAGTACAACCTAAGGCAGCTGACATCAAGAAAGCAATAGAATAGGTTAGTTTAGGTTATCTGGTTTTCATGTCTGTTTCAGCTTTGGTCGGACGGACACCTTTTAACTTTGAAATGTATTAATCTGCATGTTTCTTGATGTGTAGGGTTAGTTTAGTTTAGATTGGAGTATCAAGTATTAATATATGGTTTTAAATTTCATAATATGCTTATACTGTTCTGTTGAACTTCTATTGAGTTTGATGGAGGAAGATGATTGAAAGATTCATCATATCTGTTGTTGGTTTGTATGGCTTGCATTTACATGGAGTTAAATATTTTTTTAAATCAATGACTCGAACTCGAACACAGTTTCTTAAATAAAATATTAGAAATCAAAATGAAAAAGATAACTCATGAGATCCCATGAGTATCCAACAC

Coding sequence (CDS)

ATGGCCGCTGAGAACAAACCCTCCACCGCCGGCAAGAAACGGAAGCAGCGCTATCGTCCCAACAATAAACCAGTGAAGAAGAAGGGCCATTACCCGTTACGCCCAGGAGTCCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAGCGGCAAGCCTCCATTGAAGCTATCAATGTTATCGACTCTTATGACTTTGCCCCTTTTTACTGCTTCTGGGTTATGATTATTAATTGCTCATTCTTTAAATGCTATACATATATGTTTGTCCTGTTTAAAGGCTTTACTGTTGATTTCTTTACAAGAACGTTGATTTTTACGTATTCGTTTTCTTTATTCCATTTTCAGTTTTTTGACGAGTTAGTCCATGGAAAGGGTTCTGGTGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAAAAAATTAAGTTTTCAGATTCTGAATCTTCTGGTTCTGATGATGATGGTGATGGGGAAGAGGAGGAGGAGGAGGTGGGGGGTGAGAACGAGGACGAGAACAAGGAGGTTCCCGATGAAGAAAGCAAGTCTAAGTCTCCTAAGGAGCAAAATGATCCTTGCAATGAAAATGAAACAACGGACGTTCCAGATCCTCATCAAGGGGACACTGTAGCCACCGAAAGTCGAACAGAGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCAGAAGTTCCATCGGAGGAAGTTGAGGAGCCGCCGAAAAAGAAACACTGCATTGAAGCAGATGCATCAAAAAGTATTGTTAAGGAGAAGGAGAAATCCATTGATCAATTGATTGAAGCTGAACTTCAGGAACTGGGAGATAAAAGCAAGAGACGTTTTTTCAACCTTGATTCGGGGTGCAATGGTGTTGTCTTTATCCAAATGCGGAAGAATGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATATCAAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGTGGAGGAGATCTCCAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGTTTGCAGTATTATACGAGGCCCGTTCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAAGCTGTTCCTGAGCCTCATAAAGTTGATTTGAACAATCCTGAAAAAACCATTGTGGTTGAGATTGTCAAGACAATTTGCTTGATTGGAGTAGTGGAGAAGTACAAGGAGTTATCCAAGTACAACCTAAGGCAGCTGACATCAAGAAAGCAATAG

Protein sequence

MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVIDSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQLTSRKQ

Homology

[Close]

BLAST of Carg27721 vs. NCBI nr
Match: KAG7022121.1 (THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 839.3 bits (2167), Expect = 1.5e-239
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL
Sbjct: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 440

[Close]

BLAST of Carg27721 vs. NCBI nr
Match: XP_022930547.1 (THUMP domain-containing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 708.0 bits (1826), Expect = 5.1e-200
Identity = 387/440 (87.95%), Postives = 387/440 (87.95%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 387

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Carg27721 vs. NCBI nr
Match: KAG6588199.1 (THUMP domain-containing protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.5 bits (1804), Expect = 1.8e-197
Identity = 383/440 (87.05%), Postives = 385/440 (87.50%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD DGEEEEEEVG EN+DENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDDGEEEEEEVGDENKDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQH+MTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHIMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 387

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Carg27721 vs. NCBI nr
Match: XP_022967605.1 (THUMP domain-containing protein 1 homolog [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 4.5e-196
Identity = 384/440 (87.27%), Postives = 384/440 (87.27%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD DGEEEEEEVG ENEDENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD-DGEEEEEEVGDENEDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEV SEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVRSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 386

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 386

[Close]

BLAST of Carg27721 vs. NCBI nr
Match: XP_023531982.1 (THUMP domain-containing protein 1 homolog [Cucurbita pepo subsp. pepo] >KAG7022095.1 THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 692.6 bits (1786), Expect = 2.2e-195
Identity = 380/440 (86.36%), Postives = 382/440 (86.82%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDE 
Sbjct: 61  DS-----------------------------------------------------FFDEF 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD DGEEEEEEVG ENEDENKEVP+EE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDDGEEEEEEVGDENEDENKEVPEEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNEN+TTDVPD HQGD VATESRTEEKSNDNEKDIKCPEVPSEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENKTTDVPDTHQGDIVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 387

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Carg27721 vs. ExPASy Swiss-Prot
Match: Q9VZD8 (THUMP domain-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=CG15014 PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 3.2e-19
Identity = 71/216 (32.87%), Postives = 115/216 (53.24%), Query Frame = 0


Query: 234 SEEVEEPPKKKHCIEA-------DASKSIVKEKEKSIDQL--IEAELQELGDKSKRRFFN 293
           SE+ E  P+KK   E        D  K          D L    A+ +E+  + K RF N
Sbjct: 67  SEKPENEPEKKQPEEGAGGDAGEDDPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQN 126

Query: 294 LDSGCNGVVFIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEE 353
           +D+     VFI+ +  D    P A+ +H++  IA+T K +SRF+LR++P+EV C A++ +
Sbjct: 127 VDTNTTNCVFIRTQLED----PVALGKHIINDIATTGKSMSRFVLRLVPIEVVCRANMPD 186

Query: 354 ISRAIKPLIEKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEP---HKVDLN 413
           I  A   L +K+F  E   P  + +++  R N  I R  II  +A+ V      +KVDL 
Sbjct: 187 IITAAGELFDKHFLKE---PTSYGIIFNHRYNQQIKRDQIITQLAELVNSKNVGNKVDLK 246

Query: 414 NPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQLTS 438
             +K+I+VE+++  CL+ V++ Y E  K+NL +L +
Sbjct: 247 EAKKSIIVEVLRGWCLLSVIDNYLECKKFNLAELAN 275

[Close]

BLAST of Carg27721 vs. ExPASy Swiss-Prot
Match: Q24K03 (THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=THUMPD1 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-18
Identity = 71/223 (31.84%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 223 NEKDIKCPEVPSEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAEL-QELGD----- 282
           N  + KC E     + E     +  E  A K       +  D  +EA L +E+GD     
Sbjct: 51  NMNERKCVEEAYSLLNEYGDDMYGPEKFADKDQQPSGSEGEDDDVEAALKKEVGDIKAST 110

Query: 283 -KSKRRFFNLDSGCNGVVFIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVE 342
               RRF +++SG N VVFI+    +    PE +V H++  I  T+K  +R ILR+LP+ 
Sbjct: 111 EMRLRRFQSVESGANNVVFIRTLGIE----PEKLVHHILQDIYKTKKKKTRVILRMLPIS 170

Query: 343 VACYASVEEISRAIKPLIEKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAV--- 402
             C A +E++ +  +  +E  F   ++    F ++Y++R+N+ ++R  +I  +A  V   
Sbjct: 171 GTCKAFLEDMKKYAETFLEPWFKAPNKG--TFQIVYKSRNNSHMNREEVIKELAGIVGSL 230

Query: 403 PEPHKVDLNNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 436
              +KVDL+NP+ T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 231 NSENKVDLSNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEV 267

[Close]

BLAST of Carg27721 vs. ExPASy Swiss-Prot
Match: Q9NXG2 (THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=THUMPD1 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17
Identity = 66/218 (30.28%), Postives = 121/218 (55.50%), Query Frame = 0


Query: 221 NDNEKDIKCPEVPSEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKR 280
           N+   D+  PE  +++ ++P   +   E D +++ +K++   I    E  L        R
Sbjct: 66  NEYGDDMYGPEKFTDKDQQPSGSEG--EDDDAEAALKKEVGDIKASTEMRL--------R 125

Query: 281 RFFNLDSGCNGVVFIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYA 340
           RF +++SG N VVFI+    +    PE +V H++  +  T+K  +R ILR+LP+   C A
Sbjct: 126 RFQSVESGANNVVFIRTLGIE----PEKLVHHILQDMYKTKKKKTRVILRMLPISGTCKA 185

Query: 341 SVEEISRAIKPLIEKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAV---PEPHK 400
            +E++ +  +  +E  F   ++    F ++Y++R+N+ ++R  +I  +A  V      +K
Sbjct: 186 FLEDMKKYAETFLEPWFKAPNKG--TFQIVYKSRNNSHVNREEVIRELAGIVCTLNSENK 245

Query: 401 VDLNNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 436
           VDL NP+ T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 246 VDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEV 267

[Close]

BLAST of Carg27721 vs. ExPASy Swiss-Prot
Match: Q99J36 (THUMP domain-containing protein 1 OS=Mus musculus OX=10090 GN=Thumpd1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17
Identity = 71/223 (31.84%), Postives = 117/223 (52.47%), Query Frame = 0


Query: 223 NEKDIKCPEVPSEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAEL-QELGD----- 282
           N  + KC E     + E     +  E    K       +  D   EA L +E+GD     
Sbjct: 51  NMNERKCVEEAYSLLNEYGDDMYGPEKFIDKDQQPSGSEGEDDDAEAALKKEVGDIKAST 110

Query: 283 -KSKRRFFNLDSGCNGVVFIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVE 342
            K  RRF +++SG N VVFI+    +    PE +V H++  +  T+K  +R ILR+LP+ 
Sbjct: 111 EKRLRRFQSVESGANNVVFIRTLGIE----PEKLVHHILQDMYKTKKKKTRVILRMLPIS 170

Query: 343 VACYASVEEISRAIKPLIEKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAV--- 402
             C A +E++ +  +  +E  F   ++    F ++Y++R+N+ ++R  +I  +A  V   
Sbjct: 171 GTCKAFLEDMKKYAETFLEPWFKAPNKG--TFQIVYKSRNNSHMNREEVIKELAGIVGSL 230

Query: 403 PEPHKVDLNNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 436
              +KVDL NPE T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 231 NSENKVDLTNPEYTVVVEIIKAVCCLSVVKDYVLFRKYNLQEV 267

[Close]

BLAST of Carg27721 vs. ExPASy Swiss-Prot
Match: P87151 (Uncharacterized protein C25H2.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC25H2.10c PE=4 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 7.1e-11
Identity = 51/191 (26.70%), Postives = 96/191 (50.26%), Query Frame = 0


Query: 248 EADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFN---LDSGCNGVVFIQMRKNDGEP 307
           E  +S    +E+ + ++  +  E+  L  K+K+       LD  C  V F++ R     P
Sbjct: 69  ETQSSDQENEEEGEELEDAVAKEINSLQKKNKKELLTPIMLDMPC--VYFVKTR-----P 128

Query: 308 GPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVESQSP 367
             + V     T      K ++R+  R++P+      S++++    K LI+  F    +  
Sbjct: 129 PIDPVRLVEFTCEVGKTKKMTRYTQRLIPIVRTTGVSLDDLEELAKSLIDPLFHEGQEGI 188

Query: 368 KKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGVVEKY 427
           K+FAV    R++T + +  I  TVA+ V + H VDL N +  I+V+++K I  I +V+ +
Sbjct: 189 KEFAVQANIRNHTVLKKDDIYRTVARIVGKQHMVDLKNFKLLILVQVIKNIIGISIVQNF 248

Query: 428 KELSKYNLRQL 436
           +EL ++NL ++
Sbjct: 249 EELRRFNLNEV 252

[Close]

BLAST of Carg27721 vs. ExPASy TrEMBL
Match: A0A6J1EQU7 (THUMP domain-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436964 PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.5e-200
Identity = 387/440 (87.95%), Postives = 387/440 (87.95%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 387

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Carg27721 vs. ExPASy TrEMBL
Match: A0A6J1HUY9 (THUMP domain-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467052 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 2.2e-196
Identity = 384/440 (87.27%), Postives = 384/440 (87.27%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD DGEEEEEEVG ENEDENKEVPDEE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDD-DGEEEEEEVGDENEDENKEVPDEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
           SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEV SEEVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVRSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 386

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKELSKYNLRQLTSRKQ
Sbjct: 421 VEKYKELSKYNLRQLTSRKQ 386

[Close]

BLAST of Carg27721 vs. ExPASy TrEMBL
Match: A0A1S3BP64 (LOW QUALITY PROTEIN: THUMP domain-containing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492015 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 5.1e-169
Identity = 336/440 (76.36%), Postives = 362/440 (82.27%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAA+NKPS  GKKRKQR+ P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAADNKPSAGGKKRKQRFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
            HGK  GVKLTELADKPLNKKIKFSDSESS SDDD D EEEEEE G  ++DENK+VP+E 
Sbjct: 121 AHGKNCGVKLTELADKPLNKKIKFSDSESSSSDDD-DNEEEEEEKG--DDDENKKVPEE- 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
             SKSPKEQN+P NENETTDV +P+Q +TVA +++ EEKSNDNE+D+KCPEVPSEEVEEP
Sbjct: 181 -GSKSPKEQNEPSNENETTDVVNPNQEETVALKNQKEEKSNDNERDMKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           P KKHC+EADASKS +KEKEKSIDQLIEAELQELGDK+KRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PNKKHCVEADASKSNIKEKEKSIDQLIEAELQELGDKTKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGP+AVVQHMMTSIASTRKHISRFILR+LP+EVACYASVEEI+RAIKPLIEKNFP+E
Sbjct: 301 DGEPGPKAVVQHMMTSIASTRKHISRFILRILPIEVACYASVEEITRAIKPLIEKNFPIE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           SQ+  KFAVLYEAR+NTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SQNAVKFAVLYEARANTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 382

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VEKYKE SKYNLRQLTSRKQ
Sbjct: 421 VEKYKEFSKYNLRQLTSRKQ 382

[Close]

BLAST of Carg27721 vs. ExPASy TrEMBL
Match: A0A6J1DK01 (THUMP domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111021610 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.6e-161
Identity = 323/440 (73.41%), Postives = 347/440 (78.86%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAAENKPST  KKRKQRY P+NKPVKKKGHYPL PGVQGFF+TCDGGRERQASIEAINVI
Sbjct: 1   MAAENKPSTGAKKRKQRYLPHNKPVKKKGHYPLHPGVQGFFLTCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FF+EL
Sbjct: 61  DS-----------------------------------------------------FFEEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
           VHGK SGVKL++LADKPLNKKIKFSDSESS SDDD + E +EEE         +EVP+EE
Sbjct: 121 VHGKVSGVKLSQLADKPLNKKIKFSDSESSSSDDDNEDEGDEEE---------EEVPEEE 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
            KSKS  EQNDP NENETT+  DPHQGD V TE++TEEKSNDN  D+KC EV S EVEEP
Sbjct: 181 GKSKSHTEQNDPSNENETTEKVDPHQGDAVVTENQTEEKSNDN-SDVKCHEVLSNEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           P KKHCIEAD SK++V+EK KSIDQLIEAEL+ELGDK+KRR FNLDSGCNGVVFIQMRK 
Sbjct: 241 PSKKHCIEADTSKNVVQEKAKSIDQLIEAELEELGDKNKRRLFNLDSGCNGVVFIQMRKG 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGPE VV+HMMTSIASTRKHISRFILRVLP+EVACYASVEEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEDVVKHMMTSIASTRKHISRFILRVLPIEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420
           S+SP KFAVLYEAR+N+GIDRATIINTVAK VPEPHKVDLNNPEKTIVVEIVKTICLIGV
Sbjct: 361 SESPVKFAVLYEARANSGIDRATIINTVAKCVPEPHKVDLNNPEKTIVVEIVKTICLIGV 377

Query: 421 VEKYKELSKYNLRQLTSRKQ 441
           VE+YKELSKYNLRQLTS KQ
Sbjct: 421 VERYKELSKYNLRQLTSGKQ 377

[Close]

BLAST of Carg27721 vs. ExPASy TrEMBL
Match: A0A5A7U5T9 (THUMP domain-containing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00540 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.9e-128
Identity = 265/366 (72.40%), Postives = 289/366 (78.96%), Query Frame = 0


Query: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60
           MAA+NKPS  GKKRKQR+ P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI
Sbjct: 1   MAADNKPSAGGKKRKQRFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120
           DS                                                     FFDEL
Sbjct: 61  DS-----------------------------------------------------FFDEL 120

Query: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180
            HGK  GVKLTELADKPLNKKIKFSDSESS SDDD D EEEEEE G  ++DENK+VP+E 
Sbjct: 121 AHGKNCGVKLTELADKPLNKKIKFSDSESSSSDDD-DNEEEEEEKG--DDDENKKVPEE- 180

Query: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240
             SKSPKEQN+P NENETTDV +P+Q +TVA E++ EEKSNDNE+D+KCPEVPSEEVEEP
Sbjct: 181 -GSKSPKEQNEPSNENETTDVVNPNQEETVAPENQKEEKSNDNERDMKCPEVPSEEVEEP 240

Query: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300
           P KKHC+EADASKS +KEKEKSIDQLIEAELQELGDK+KRRFFNLDSGCNGVVFIQMRKN
Sbjct: 241 PNKKHCVEADASKSNIKEKEKSIDQLIEAELQELGDKTKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360
           DGEPGP+AVVQHMMTSIASTRKHISRFILR+LP+EVACYASVEEI+RAIKPLIEKNFP+E
Sbjct: 301 DGEPGPKAVVQHMMTSIASTRKHISRFILRILPIEVACYASVEEITRAIKPLIEKNFPIE 308

Query: 361 SQSPKK 367
           SQ+  K
Sbjct: 361 SQNAVK 308

[Close]

BLAST of Carg27721 vs. TAIR 10
Match: AT5G12410.1 (THUMP domain-containing protein )

HSP 1 Score: 355.5 bits (911), Expect = 6.0e-98
Identity = 221/433 (51.04%), Postives = 276/433 (63.74%), Query Frame = 0


Query: 12  KKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVIDSYDFAPFYCF 71
           KKRKQ YRP N+PVKKKG YPL+PGVQGFFI+CDGGRE QA+ EAINVIDS         
Sbjct: 8   KKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDS--------- 67

Query: 72  WVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDELVHGKGSGVKLT 131
                                                       FF+EL+ G  S V   
Sbjct: 68  --------------------------------------------FFEELIQGTDSKVN-P 127

Query: 132 ELADKPLNKKIKFSDSESSGSDDD--GDGEEEEEEVGGE----NEDENKEVPDEESKSKS 191
            L   P+NKK+ FS SE    ++D   +GEEEE +  G+    +E  N  V ++E  S+ 
Sbjct: 128 GLFGNPINKKVTFSYSEDEDEEEDESNNGEEEENKGDGDKAVVSEGGNDLVNEKEIASEG 187

Query: 192 PKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEPPKKKH 251
               ND  NE E               E+  EE+   N+K+           +EPP+KK 
Sbjct: 188 ---VNDQVNEKEIASEGSCEVKQLAENETVKEEEDKGNQKN---------GGDEPPRKKT 247

Query: 252 CI-EADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKNDGEP 311
           C  EA+    + +  EKSID+LIEAEL+ELGDKSKRRF  LD GCNG+VFIQM+K DG+P
Sbjct: 248 CTEEANPLAKVNENAEKSIDKLIEAELKELGDKSKRRFMKLDPGCNGLVFIQMKKRDGDP 307

Query: 312 GPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVESQSP 371
            P+ +VQH MTS A+T+KH+SRFILR+LP+EV+CY S EEISRAIKPL+E+ FP+E+++P
Sbjct: 308 SPKEIVQHAMTSAAATKKHMSRFILRLLPIEVSCYPSEEEISRAIKPLVEQYFPIETENP 367

Query: 372 KKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGVVEKY 431
           +KFAVLY AR+NTG+DR  IINT+AK++P PHKVDL+NPE TIVVEI+KT+CLIGVVEKY
Sbjct: 368 RKFAVLYGARANTGLDRMKIINTIAKSIPAPHKVDLSNPEMTIVVEIIKTVCLIGVVEKY 374

Query: 432 KELSKYNLRQLTS 438
           KEL+KYNLRQLTS
Sbjct: 428 KELAKYNLRQLTS 374

The following BLAST results are available for this feature:

BLAST of Carg27721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022121.1	1.5e-239	100.00	THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. ar...	[more]
XP_022930547.1	5.1e-200	87.95	THUMP domain-containing protein 1 homolog [Cucurbita moschata]	[more]
KAG6588199.1	1.8e-197	87.05	THUMP domain-containing protein 1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_022967605.1	4.5e-196	87.27	THUMP domain-containing protein 1 homolog [Cucurbita maxima]	[more]
XP_023531982.1	2.2e-195	86.36	THUMP domain-containing protein 1 homolog [Cucurbita pepo subsp. pepo] >KAG70220...	[more]

BLAST of Carg27721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VZD8	3.2e-19	32.87	THUMP domain-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q24K03	4.6e-18	31.84	THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=THUMPD1 PE=2 SV=1	[more]
Q9NXG2	1.8e-17	30.28	THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=THUMPD1 PE=1 SV=2	[more]
Q99J36	1.8e-17	31.84	THUMP domain-containing protein 1 OS=Mus musculus OX=10090 GN=Thumpd1 PE=1 SV=1	[more]
P87151	7.1e-11	26.70	Uncharacterized protein C25H2.10c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Carg27721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQU7	2.5e-200	87.95	THUMP domain-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HUY9	2.2e-196	87.27	THUMP domain-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3BP64	5.1e-169	76.36	LOW QUALITY PROTEIN: THUMP domain-containing protein 1 homolog OS=Cucumis melo O...	[more]
A0A6J1DK01	6.6e-161	73.41	THUMP domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111021610...	[more]
A0A5A7U5T9	1.9e-128	72.40	THUMP domain-containing protein 1-like protein OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Carg27721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12410.1	6.0e-98	51.04	THUMP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004114	THUMP domain	SMART	SM00981	THUMP_a_2	coord: 330..422 e-value: 4.4E-9 score: 46.2
IPR004114	THUMP domain	PFAM	PF02926	THUMP	coord: 321..421 e-value: 6.4E-16 score: 58.7
IPR004114	THUMP domain	PROSITE	PS51165	THUMP	coord: 316..422 score: 21.40884
None	No IPR available	GENE3D	3.30.2300.10	THUMP superfamily	coord: 339..422 e-value: 1.9E-25 score: 91.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..30
None	No IPR available	PANTHER	PTHR13452:SF10	THUMP DOMAIN-CONTAINING PROTEIN 1	coord: 1..438
None	No IPR available	SUPERFAMILY	143437	THUMP domain-like	coord: 340..421
IPR040183	THUMP domain-containing protein 1-like	PANTHER	PTHR13452	THUMP DOMAIN CONTAINING PROTEIN 1-RELATED	coord: 1..438
IPR040183	THUMP domain-containing protein 1-like	CDD	cd11717	THUMP_THUMPD1_like	coord: 280..422 e-value: 2.80051E-45 score: 152.738

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27721-RA	Carg27721-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006400	tRNA modification
molecular_function	GO:0003723	RNA binding