Carg27704 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg27704
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 1
LocationCarg_Chr17: 7150791 .. 7151564 (-)
RNA-Seq ExpressionCarg27704
SyntenyCarg27704
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

mRNA sequence

ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Coding sequence (CDS)

ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Protein sequence

MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Homology
BLAST of Carg27704 vs. NCBI nr
Match: KAG7014175.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 524.6 bits (1350), Expect = 4.7e-145
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0

Query: 1   MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDL 60
           MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDL
Sbjct: 1   MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDL 60

Query: 61  GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHN 120
           GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHN
Sbjct: 61  GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHN 120

Query: 121 RKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPF 180
           RKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPF
Sbjct: 121 RKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPF 180

Query: 181 ELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKR 240
           ELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKR
Sbjct: 181 ELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKR 240

Query: 241 PHNELHKLDCLDLSLRL 258
           PHNELHKLDCLDLSLRL
Sbjct: 241 PHNELHKLDCLDLSLRL 257

BLAST of Carg27704 vs. NCBI nr
Match: KAG6575625.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 463.8 bits (1192), Expect = 9.9e-127
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0

Query: 29  MDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGT 88
           MDSPPE+KDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGT
Sbjct: 1   MDSPPEIKDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGT 60

Query: 89  EAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLP 148
           EAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLP
Sbjct: 61  EAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLP 120

Query: 149 FQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQSG 208
           FQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPF+ EVWDRQPLYTQVATGKWPLSKNY+SG
Sbjct: 121 FQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFKPEVWDRQPLYTQVATGKWPLSKNYRSG 180

Query: 209 ASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
           ASPVLPSSSGA GFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Sbjct: 181 ASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 229

BLAST of Carg27704 vs. NCBI nr
Match: XP_023548450.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.2 bits (1066), Expect = 4.0e-112
Identity = 207/230 (90.00%), Postives = 213/230 (92.61%), Query Frame = 0

Query: 29  MDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEG 88
           MDSPPE+KDPSDSKDISP LVSLD SLSNKDLGGSL PEELNLIDFF ADNLPN  S+EG
Sbjct: 1   MDSPPEIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEG 60

Query: 89  TEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSL 148
            EAAAKPRVFSC FCPREF SSQALGGHQNAHNRKRK A+  HKLVTNSTDCK SSVSSL
Sbjct: 61  KEAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSL 120

Query: 149 PFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQS 208
           PFQGFNRSLGIQMHSMIHKPFSHAPVFGSF  FE +VWDRQPLYTQVA+G WPLS+NYQS
Sbjct: 121 PFQGFNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQS 180

Query: 209 GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
           GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Sbjct: 181 GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230

BLAST of Carg27704 vs. NCBI nr
Match: XP_038896249.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 187/259 (72.20%), Postives = 204/259 (78.76%), Query Frame = 0

Query: 1   MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDL 60
           MSLPAKSE +TTSINSL DELPWLQ           DPSDSKD SPELVSLDL LSNKDL
Sbjct: 1   MSLPAKSELQTTSINSLVDELPWLQ-----------DPSDSKDTSPELVSLDLKLSNKDL 60

Query: 61  GGSL-PEELNLIDFFCADNLPNYISYEGT-EAAAKPRVFSCTFCPREFLSSQALGGHQNA 120
           GGSL PEELNL+D F ADNLPN  SY+G  EAAAKPRVFSC +CPR+F SSQALGGHQNA
Sbjct: 61  GGSLMPEELNLVDSFDADNLPNDRSYQGVEEAAAKPRVFSCNYCPRKFFSSQALGGHQNA 120

Query: 121 HNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFH 180
           H+R+RK AK  +KLVTNST  K+SSV SLP QGFN S+GIQ  S+IHKPFSH+P FGS H
Sbjct: 121 HSRERKIAKTGNKLVTNSTGSKYSSVPSLPLQGFNGSVGIQARSLIHKPFSHSPFFGSLH 180

Query: 181 PFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDS 240
           PF+LEVW RQ LYTQVA G+WP  +NY SG SPV PSSSGAA  D G  LS NSD+  DS
Sbjct: 181 PFQLEVWSRQSLYTQVAAGQWPSPENYLSGTSPVPPSSSGAACCDAGRTLSLNSDSFSDS 240

Query: 241 KRPHNELHKLDCLDLSLRL 258
              HNELH+LDCLDLSLRL
Sbjct: 241 NCTHNELHELDCLDLSLRL 248

BLAST of Carg27704 vs. NCBI nr
Match: KAG7014179.1 (hypothetical protein SDJN02_24353, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 3.2e-77
Identity = 166/257 (64.59%), Postives = 168/257 (65.37%), Query Frame = 0

Query: 1   MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDL 60
           MSLPAKSEPETTSINSLADELPWLQQVSMDSPPE+KDPSDSKDIS ELVSLDLSLSNKDL
Sbjct: 1   MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDL 60

Query: 61  GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHN 120
           GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPR                         
Sbjct: 61  GGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRP------------------------ 120

Query: 121 RKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 171

Query: 181 ELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKR 240
             EVWDRQPLYTQVATGKWPLSKNY+SGASPVLPSSSGA GFDGGWRLSSNSDTLLDSKR
Sbjct: 181 --EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKR 171

Query: 241 PHNELHKLDCLDLSLRL 258
           PHNELHKLDCLDLSLRL
Sbjct: 241 PHNELHKLDCLDLSLRL 171

BLAST of Carg27704 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 75/212 (35.38%), Postives = 102/212 (48.11%), Query Frame = 0

Query: 67  ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKA 126
           ELNLID  C D+  + ++   T  + + ++FSC +C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVNESTT--STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 127 KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSFHPFEL 186
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G +     
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 187 EVWDRQPLYTQVATGKWPLSKNYQSGASPVL---------------PSSSGAAGFDGGWR 246
             W R P   Q A GK+P   N+      ++               PS++G    +G   
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRV-LEGSPT 214

Query: 247 LSS--NSDTLLDSKRPHNELHKLDCLDLSLRL 258
           L        LL S   H E  K   LDLSL+L
Sbjct: 215 LEQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

BLAST of Carg27704 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 61/133 (45.86%), Postives = 71/133 (53.38%), Query Frame = 0

Query: 51  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQ 110
           L+L L+    G +   ELNLID F   +          E  A PRVFSC +C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81

Query: 111 ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 168
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

BLAST of Carg27704 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.3e-11
Identity = 71/216 (32.87%), Postives = 101/216 (46.76%), Query Frame = 0

Query: 56  SNKDLGGSLPE------ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSS 115
           SN+DL  S PE      +L L D F  D        + T+  A PRVFSC +C R+F SS
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT-------KSTKCEANPRVFSCNYCRRKFYSS 80

Query: 116 QALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPF 175
           QALGGHQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   
Sbjct: 81  QALGGHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTL 140

Query: 176 SH-APVFGSFHPFELEVWDRQPLYTQVATGK----WPLS--KNYQSGASPVLPSSSGAAG 235
           S   P+   FH  +    +  PL+     G     WP S  +  +   +PV+  +S  +G
Sbjct: 141 SQPQPLVSRFH-HQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESG 200

Query: 236 FDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
            D    +++N     +S +P          DL+LRL
Sbjct: 201 LDLN-SVAANGGVDNNSSKP----------DLTLRL 209

BLAST of Carg27704 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 45/144 (31.25%), Postives = 66/144 (45.83%), Query Frame = 0

Query: 42  KDISPELVSLDLSLSNKDLGGSLPEELNL-IDFFCADNLPNYISYEGTEAAAKPRVFSCT 101
           +D  P  ++L LS +N +      E  +L +         N    +  + +   RVFSC 
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 102 FCPREFLSSQALGGHQNAHNRKRKKAKPAHKL------------VTNSTDCKHSSVSSLP 161
           +C R+F SSQALGGHQNAH R+R  AK A ++               +     +++S LP
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 162 FQGFN-------RSLGIQMHSMIH 166
             G         R+LGI+ HS  H
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAH 172

BLAST of Carg27704 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.3e-08
Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0

Query: 84  SYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSS 143
           S   +    +PRVFSC +C R+F SSQALGGHQNAH  +R  AK + +L  +S      S
Sbjct: 39  STNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTV--DS 98

Query: 144 VSSLPFQG 152
               PF G
Sbjct: 99  DQPYPFSG 104

BLAST of Carg27704 vs. ExPASy TrEMBL
Match: A0A1S3CEM5 (zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103500023 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.0e-76
Identity = 161/252 (63.89%), Postives = 185/252 (73.41%), Query Frame = 0

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL---P 68
           PETT INSLA+EL WLQ           DP+DSKD SPELVSLD  LSN +LGG L    
Sbjct: 3   PETTRINSLAEELTWLQ-----------DPNDSKDTSPELVSLDFRLSNTNLGGGLTQEE 62

Query: 69  EELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKK 128
           EE NLIDFF ADNLPN  SYEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK 
Sbjct: 63  EEPNLIDFFDADNLPNGSSYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKM 122

Query: 129 AKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVW 188
           AK + K+VTNST CK+S           +SLGIQ  SMIHKPFS++PVFGSFHPF+LE  
Sbjct: 123 AKTSSKMVTNSTGCKYS-----------KSLGIQARSMIHKPFSYSPVFGSFHPFQLEAK 182

Query: 189 DRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNEL 248
           +RQ LY Q+A G+WP  KNY S  SPV PS+SGA     GW L   +D+LLDSKR  NEL
Sbjct: 183 NRQSLYEQLAAGQWPSKKNYLSRTSPVPPSTSGATSC-AGWTL---NDSLLDSKRTCNEL 228

Query: 249 HKLDCLDLSLRL 258
           HKLDCLDLSL+L
Sbjct: 243 HKLDCLDLSLKL 228

BLAST of Carg27704 vs. ExPASy TrEMBL
Match: A0A5D3CH42 (Zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001750 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.3e-76
Identity = 160/252 (63.49%), Postives = 185/252 (73.41%), Query Frame = 0

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL---P 68
           PETT INSLA+EL WLQ           DP+DSKD SPELVSLD  LSN +LGG      
Sbjct: 8   PETTRINSLAEELTWLQ-----------DPNDSKDTSPELVSLDFRLSNTNLGGGFTQEE 67

Query: 69  EELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKK 128
           EE NLIDFF ADNLPN  SYEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK 
Sbjct: 68  EEPNLIDFFDADNLPNGSSYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKM 127

Query: 129 AKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVW 188
           AK + K+VTNST+CK+S           +SLGIQ  SMIHKPFS++PVFGSFHPF+LE  
Sbjct: 128 AKTSSKMVTNSTECKYS-----------KSLGIQARSMIHKPFSYSPVFGSFHPFQLEAK 187

Query: 189 DRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNEL 248
           +RQ LY Q+A G+WP  KNY S  SPV PS+SGA     GW L   +D+LLDSKR  NEL
Sbjct: 188 NRQSLYEQLAAGQWPSKKNYLSRTSPVPPSTSGATSC-AGWTL---NDSLLDSKRTCNEL 233

Query: 249 HKLDCLDLSLRL 258
           HKLDCLDLSL+L
Sbjct: 248 HKLDCLDLSLKL 233

BLAST of Carg27704 vs. ExPASy TrEMBL
Match: A0A0A0K8M2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432050 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 4.2e-75
Identity = 162/253 (64.03%), Postives = 183/253 (72.33%), Query Frame = 0

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL---- 68
           PETTSINSLA ELPWLQ           DP+DSKD SPELVSL+  LSN +LGG L    
Sbjct: 3   PETTSINSLA-ELPWLQ-----------DPNDSKDTSPELVSLEFRLSNTNLGGGLMQEE 62

Query: 69  PEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRK 128
            EE NLIDFF ADNLPN   YEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK
Sbjct: 63  EEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERK 122

Query: 129 KAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEV 188
            AK  +K+VTNST CK+S           +SLGIQ  SMIHKPFSH+ VFGSFHPF+LE 
Sbjct: 123 IAKTGNKMVTNSTACKYS-----------KSLGIQARSMIHKPFSHSSVFGSFHPFQLEA 182

Query: 189 WDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNE 248
             RQ LY QVA G+WP  KNY S  SPV PS+SGA     GW L  N+D+LLDS R  NE
Sbjct: 183 KSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNE 229

Query: 249 LHKLDCLDLSLRL 258
           LHKLDCLDLSL+L
Sbjct: 243 LHKLDCLDLSLKL 229

BLAST of Carg27704 vs. ExPASy TrEMBL
Match: A0A6J1DKR7 (zinc finger protein 1-like OS=Momordica charantia OX=3673 GN=LOC111021988 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68
Identity = 161/261 (61.69%), Postives = 186/261 (71.26%), Query Frame = 0

Query: 1   MSLPAKSE--PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNK 60
           MS+PAKSE  PETTSI+   DELPWL+QV             SKDIS E VSLDL LSN+
Sbjct: 1   MSVPAKSEPCPETTSISLSTDELPWLRQV-------------SKDISTE-VSLDLRLSNE 60

Query: 61  DLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQN 120
           DL GSL PEELNLID F A  LP   S +G E  AKPRV SC +C R+F SSQALGGHQN
Sbjct: 61  DLVGSLMPEELNLIDSFDAICLPG-TSSQGKE-VAKPRVLSCNYCQRKFFSSQALGGHQN 120

Query: 121 AHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKP-FSHAPVFGS 180
           AH+R+RK AK   KL   S++ K SSVSS+   GFNRSLGIQ H+MI KP  SHAP+FGS
Sbjct: 121 AHSRQRKLAKIGRKLDHVSSEYKFSSVSSISLHGFNRSLGIQAHTMIQKPCASHAPIFGS 180

Query: 181 FHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLL 240
           FHP EL+VWDRQ LYT++A G+ P  +++ SG S V  SS GAA FDGGW LS  S +L 
Sbjct: 181 FHPSELDVWDRQHLYTKLAAGR-PSPESFLSGDSSVPSSSRGAARFDGGWMLSPTSGSLF 240

Query: 241 DSKRPHNELHKLDCLDLSLRL 258
           + K  H+ELH+LDCLDLSLRL
Sbjct: 241 NPKHKHDELHELDCLDLSLRL 244

BLAST of Carg27704 vs. ExPASy TrEMBL
Match: A0A5B6ZUV6 (C2H2-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_017196 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.9e-32
Identity = 113/288 (39.24%), Postives = 158/288 (54.86%), Query Frame = 0

Query: 4   PAKSE----PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKD 63
           P++SE     E++SI S+++  P L    ++S  +++D      I+P+LV LDLSL++KD
Sbjct: 3   PSRSEACDLSESSSIISVSEAPPCLNSTPIES--QIEDQL-QHTINPDLVVLDLSLASKD 62

Query: 64  LGG---SLPEELNLIDFFCADNLPNYISYEGTEA--AAKPRVFSCTFCPREFLSSQALGG 123
                 +L  ELNLID F   + PN ++    +     +PR+FSC +C R+F SSQALGG
Sbjct: 63  SDQGRLNLKPELNLIDCFSMSSSPNSMNNLQAQGHQETEPRIFSCNYCQRKFYSSQALGG 122

Query: 124 HQNAHNRKRKKAKPAHKLVTNSTDC-------------KHSSVSSLPFQG-FNRSLGIQM 183
           HQNAH R+R  AK   ++ T ++               ++SS++SLP  G FNRSLGIQ+
Sbjct: 123 HQNAHKRERTLAKRGQRVGTAASSSSAAAFGHDVSYQQRYSSMASLPLHGSFNRSLGIQV 182

Query: 184 HSMIHK---PFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSS 243
           HSMIHK   P S   + GS H +    W R+P+  Q A G+    +NY +G S   PS  
Sbjct: 183 HSMIHKSYLPSSTTTINGSSHIYGHHGWSRKPIDQQPAIGRL-APENYHAGTSVGSPSVG 242

Query: 244 GAAGFDGGWRLSSNS--------DTLLDSKRPHNELHKLDCLDLSLRL 258
            AA FDG  + S  S        DT    K   +EL K   LDLSL+L
Sbjct: 243 SAARFDGVRKFSPASDGFGGYRWDTSSHLKTNQDELQK---LDLSLKL 283

BLAST of Carg27704 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-19
Identity = 81/250 (32.40%), Postives = 119/250 (47.60%), Query Frame = 0

Query: 24  LQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLG-GSLPEELNLIDFFCADNLPNY 83
           L+  ++D+    ++    +    E + LDL L+  D     L +ELNL+D  C +     
Sbjct: 33  LENYNIDTVAAQEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQELNLLD--CLETGVVT 92

Query: 84  ISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHS 143
            S+ G+  + + ++FSC +C R F SSQALGGHQNAH R+R  AK   ++ + +      
Sbjct: 93  PSFNGS-TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY 152

Query: 144 SVSSLPFQG--FNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWP 203
             + +PF G   NR+LGIQ HSM HKP S+    G +       W R PL  Q A  K  
Sbjct: 153 GFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQIN---WSRIPLVQQPAIAKLT 212

Query: 204 LSKNYQSG-----ASPVLPSSSGAAGFDGG--------WRLSSNSDTLLDSKRPHNELHK 258
            ++N+ +      A P+  +      FD G          L    + LL   +P  E  K
Sbjct: 213 STENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELL---KPAEE-EK 272

BLAST of Carg27704 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 91.7 bits (226), Expect = 9.5e-19
Identity = 75/212 (35.38%), Postives = 102/212 (48.11%), Query Frame = 0

Query: 67  ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKA 126
           ELNLID  C D+  + ++   T  + + ++FSC +C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVNESTT--STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 127 KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSFHPFEL 186
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G +     
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 187 EVWDRQPLYTQVATGKWPLSKNYQSGASPVL---------------PSSSGAAGFDGGWR 246
             W R P   Q A GK+P   N+      ++               PS++G    +G   
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRV-LEGSPT 214

Query: 247 LSS--NSDTLLDSKRPHNELHKLDCLDLSLRL 258
           L        LL S   H E  K   LDLSL+L
Sbjct: 215 LEQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

BLAST of Carg27704 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17
Identity = 61/133 (45.86%), Postives = 71/133 (53.38%), Query Frame = 0

Query: 51  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQ 110
           L+L L+    G +   ELNLID F   +          E  A PRVFSC +C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81

Query: 111 ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 168
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

BLAST of Carg27704 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 68.9 bits (167), Expect = 6.6e-12
Identity = 71/216 (32.87%), Postives = 101/216 (46.76%), Query Frame = 0

Query: 56  SNKDLGGSLPE------ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSS 115
           SN+DL  S PE      +L L D F  D        + T+  A PRVFSC +C R+F SS
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT-------KSTKCEANPRVFSCNYCRRKFYSS 80

Query: 116 QALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPF 175
           QALGGHQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   
Sbjct: 81  QALGGHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTL 140

Query: 176 SH-APVFGSFHPFELEVWDRQPLYTQVATGK----WPLS--KNYQSGASPVLPSSSGAAG 235
           S   P+   FH  +    +  PL+     G     WP S  +  +   +PV+  +S  +G
Sbjct: 141 SQPQPLVSRFH-HQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESG 200

Query: 236 FDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
            D    +++N     +S +P          DL+LRL
Sbjct: 201 LDLN-SVAANGGVDNNSSKP----------DLTLRL 209

BLAST of Carg27704 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 45/144 (31.25%), Postives = 66/144 (45.83%), Query Frame = 0

Query: 42  KDISPELVSLDLSLSNKDLGGSLPEELNL-IDFFCADNLPNYISYEGTEAAAKPRVFSCT 101
           +D  P  ++L LS +N +      E  +L +         N    +  + +   RVFSC 
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 102 FCPREFLSSQALGGHQNAHNRKRKKAKPAHKL------------VTNSTDCKHSSVSSLP 161
           +C R+F SSQALGGHQNAH R+R  AK A ++               +     +++S LP
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 162 FQGFN-------RSLGIQMHSMIH 166
             G         R+LGI+ HS  H
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAH 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7014175.14.7e-145100.00Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6575625.19.9e-12797.82Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023548450.14.0e-11290.00zinc finger protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_038896249.11.9e-9372.20zinc finger protein 3-like [Benincasa hispida][more]
KAG7014179.13.2e-7764.59hypothetical protein SDJN02_24353, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Q392621.3e-1735.38Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
Q424852.5e-1645.86Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
Q392669.3e-1132.87Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
Q392631.5e-0831.25Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
Q392617.3e-0845.59Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CEM51.0e-7663.89zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103500023 PE=4 SV=1[more]
A0A5D3CH421.3e-7663.49Zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A0A0K8M24.2e-7564.03C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432050 P... [more]
A0A6J1DKR71.7e-6861.69zinc finger protein 1-like OS=Momordica charantia OX=3673 GN=LOC111021988 PE=4 S... [more]
A0A5B6ZUV69.9e-3239.24C2H2-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_01719... [more]
Match NameE-valueIdentityDescription
AT5G10970.12.5e-1932.40C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G25160.19.5e-1935.38zinc finger protein 3 [more]
AT1G80730.11.8e-1745.86zinc-finger protein 1 [more]
AT1G24625.16.6e-1232.87zinc finger protein 7 [more]
AT1G66140.11.1e-0931.25zinc finger protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 80..147
e-value: 1.5E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47287:SF1ZINC FINGER PROTEIN 1-LIKEcoord: 5..257
IPR044246Zinc finger protein 3-likePANTHERPTHR47287C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEINcoord: 5..257
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 99..119
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 97..124
score: 10.574757
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 94..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27704-RACarg27704-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009788 negative regulation of abscisic acid-activated signaling pathway