Carg27656 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27656
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr03: 2702146 .. 2704395 (-)
RNA-Seq Expression	Carg27656
Synteny	Carg27656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGGTATATCTTAATACGATAGAATAGGGAAAGGGGCCTGAGGTTCCACATCGGTTGGGGAGGTTAGTGGTGACCTTGGGCTGTTATAAATGGTATTCAAGTCAGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

mRNA sequence

GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

Coding sequence (CDS)

GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

Protein sequence

DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTLGDVRRTSEQAEPRMGLYTRRCVSKDARPRRRVDYEMSHRLGRRIEAFFIRV

Homology

[Close]

BLAST of Carg27656 vs. NCBI nr
Match: KAG7033612.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1439.5 bits (3725), Expect = 0.0e+00
Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK
Sbjct: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60

Query: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120
           SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG
Sbjct: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120

Query: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180
           SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM
Sbjct: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180

Query: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240
           RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED
Sbjct: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240

Query: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300
           EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK
Sbjct: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300

Query: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360
           TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG
Sbjct: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360

Query: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 420
           AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI
Sbjct: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 420

Query: 421 CGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 480
           CGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN
Sbjct: 421 CGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 480

Query: 481 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 540
           LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL
Sbjct: 481 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 540

Query: 541 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYT 600
           SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYT
Sbjct: 541 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYT 600

Query: 601 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYD 660
           LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYD
Sbjct: 601 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYD 660

Query: 661 LLTLGDVRRTSEQAEPRMGLYTRRCVSKDARPRRRVDYEMSHRLGRRIEAFFIRV 716
           LLTLGDVRRTSEQAEPRMGLYTRRCVSKDARPRRRVDYEMSHRLGRRIEAFFIRV
Sbjct: 661 LLTLGDVRRTSEQAEPRMGLYTRRCVSKDARPRRRVDYEMSHRLGRRIEAFFIRV 715

[Close]

BLAST of Carg27656 vs. NCBI nr
Match: XP_023526509.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1312.0 bits (3394), Expect = 0.0e+00
Identity = 651/662 (98.34%), Postives = 653/662 (98.64%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           DLRLLKQIHAYFILSSGFDTVFIASKLIRLY KFNDLPSAVSVLNAFPHTEPMLWNSIIK
Sbjct: 13  DLRLLKQIHAYFILSSGFDTVFIASKLIRLYAKFNDLPSAVSVLNAFPHTEPMLWNSIIK 72

Query: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120
           SQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG
Sbjct: 73  SQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 132

Query: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180
           SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVN GDIVCALNLFEGM
Sbjct: 133 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGDIVCALNLFEGM 192

Query: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240
           RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED
Sbjct: 193 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 252

Query: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300
           EFV FFSEIDCKNVVSW+ILISFYSSVGDIVKAVDIFKQIM GEVPLIIETLTILISATK
Sbjct: 253 EFVCFFSEIDCKNVVSWNILISFYSSVGDIVKAVDIFKQIMGGEVPLIIETLTILISATK 312

Query: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360
           TS+SMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG
Sbjct: 313 TSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 372

Query: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 420
           AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI
Sbjct: 373 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 432

Query: 421 CGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 480
            GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN
Sbjct: 433 YGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 492

Query: 481 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 540
           LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL
Sbjct: 493 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 552

Query: 541 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYT 600
           SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGD KIAIYAAHRLLELEPDNVGYYT
Sbjct: 553 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDTKIAIYAAHRLLELEPDNVGYYT 612

Query: 601 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYD 660
           LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNG IHGFVSGDRSH KTDQIYD
Sbjct: 613 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHGKTDQIYD 672

Query: 661 LL 663
           LL
Sbjct: 673 LL 674

[Close]

BLAST of Carg27656 vs. NCBI nr
Match: KAG6603417.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1227.6 bits (3175), Expect = 0.0e+00
Identity = 606/610 (99.34%), Postives = 607/610 (99.51%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHAR VFDEMPNRDLVSWTSMISAYV+VGDIVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARNVFDEMPNRDLVSWTSMISAYVDVGDIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL
Sbjct: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP
Sbjct: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
           SKTDQIYDLL
Sbjct: 601 SKTDQIYDLL 610

[Close]

BLAST of Carg27656 vs. NCBI nr
Match: XP_022932989.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 601/610 (98.52%), Postives = 604/610 (99.02%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRV EPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL
Sbjct: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP
Sbjct: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG+H
Sbjct: 361 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKD VKKPGWSF+ELNG +HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

[Close]

BLAST of Carg27656 vs. NCBI nr
Match: XP_022967941.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1195.6 bits (3092), Expect = 0.0e+00
Identity = 593/610 (97.21%), Postives = 599/610 (98.20%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLF SAIMLYKNMREVGVEHDGFTFPILNHVVMSI VDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFQSAIMLYKNMREVGVEHDGFTFPILNHVVMSICVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVN G IVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGVIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVR FSEIDCKNVVSW+ILISFY SVGDIVKAVDIFKQIM+GEVPLII+TL
Sbjct: 181 YSRLGGEDEFVRVFSEIDCKNVVSWNILISFYFSVGDIVKAVDIFKQIMSGEVPLIIDTL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTS+SMCLILGENLHSLAIKTGLYDSILRTSLLDMYAK GELDNSTRLFNEIP
Sbjct: 241 TILISATKTSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKIGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAV+IFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVDIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRIHGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEK+LVKKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKNLVKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

[Close]

BLAST of Carg27656 vs. ExPASy Swiss-Prot
Match: O49619 (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-107
Identity = 215/643 (33.44%), Postives = 362/643 (56.30%), Query Frame = 0


Query: 25  SKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVE 84
           ++ +R +     +  A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 85  HDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARK 144
            D FT+P +   V  I   +     +H + I++GF SD+Y CN+++ +Y K  C   A K
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 145 VFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRV-LEPNSVTMMAMLQACCVTED 204
           VF+EMP RD+VSW SMIS Y+ +GD   +L LF+ M +   +P+  + M+ L AC     
Sbjct: 188 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 247

Query: 205 LVLGRLIQCLVVKNGL-LFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILIS 264
             +G+ I C  V++ +   DV +    L MYS+ G      R F+ +  +N+V+W+++I 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 265 FYSSVGDIVKAVDIFKQI--MAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKT 324
            Y+  G +  A   F+++    G  P +I ++ +L        +  ++ G  +H  A++ 
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL-------PASAILEGRTIHGYAMRR 367

Query: 325 G-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIF 384
           G L   +L T+L+DMY + G+L ++  +F+ +  +++I+W +++++++QNG    A+E+F
Sbjct: 368 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 427

Query: 385 SQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYV 444
            ++  + L P    +  ++ AYA   +L  GR IH Y+++       NT +  SL++MY 
Sbjct: 428 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYA 487

Query: 445 RCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLS 504
            CG +  ARKCF+ I++KDVV+W S+I  Y  HG G  ++ L+  M++  V PN  TF S
Sbjct: 488 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 547

Query: 505 LLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNL 564
           LL+ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A   +  M  +
Sbjct: 548 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 607

Query: 565 CDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLR 624
              RIWG+L+ A R + D  IA +AA ++ ++E DN G Y LL N  A  G+W +V +++
Sbjct: 608 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 667

Query: 625 SVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
            ++  K + +    S +E  G  H F +GDRSH  T++IY++L
Sbjct: 668 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

[Close]

BLAST of Carg27656 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 8.6e-99
Identity = 210/655 (32.06%), Postives = 362/655 (55.27%), Query Frame = 0


Query: 13  ILSSGFDT-VFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSA 72
           IL  GF++ +F+ + L+ +Y +   L  A  V +  P  + + WNS+I      G +  A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 73  IMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMME 132
           + +Y  ++   +  D FT   +     ++ V V     +H   ++ G  S +   N ++ 
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLV-VKQGQGLHGFALKSGVNSVVVVNNGLVA 251

Query: 133 VYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTM 192
           +Y K      AR+VFDEM  RD VS+ +MI  Y+ +  +  ++ +F       +P+ +T+
Sbjct: 252 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTV 311

Query: 193 MAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDC 252
            ++L+AC    DL L + I   ++K G + +  ++N  + +Y++ G        F+ ++C
Sbjct: 312 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 371

Query: 253 KNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILIS-ATKTSDSMCLILG 312
           K+ VSW+ +IS Y   GD+++A+ +FK +M  E      T  +LIS +T+ +D   L  G
Sbjct: 372 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD---LKFG 431

Query: 313 ENLHSLAIKTGL-YDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQN 372
           + LHS  IK+G+  D  +  +L+DMYAK GE+ +S ++F+ +     +TW  ++S+ ++ 
Sbjct: 432 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 491

Query: 373 GHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTH 432
           G F   +++ +QM+ + + P +      +   A L A +LG+ IHC L+R  G E     
Sbjct: 492 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF-GYE-SELQ 551

Query: 433 LETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEE 492
           +  +L+ MY +CG + ++ + F+ +  +DVV WT MI  YG +G+G  AL  +  M    
Sbjct: 552 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 611

Query: 493 VAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREA 552
           + P+SV F++++ ACSHSGLV EG   F  M++ + I P +EHY C VDLLSRS ++ +A
Sbjct: 612 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 671

Query: 553 FAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASV 612
              I  M    D  IW +++ ACR  GD + A   + R++EL PD+ GY  L SN  A++
Sbjct: 672 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 731

Query: 613 GQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTL 665
            +W +V  +R  + +K + K PG+S+IE+   +H F SGD S  +++ IY  L +
Sbjct: 732 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEI 780

[Close]

BLAST of Carg27656 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-98
Identity = 220/708 (31.07%), Postives = 383/708 (54.10%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           +L+  K +HA  ++S     V I++KL+ LY    ++  A    +   + +   WN +I 
Sbjct: 66  NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 61  SQVDSGLFLSAIMLYK-NMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGF 120
               +G     I  +   M   G+  D  TFP     V+     V+    +HC+ ++ GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP----SVLKACRTVIDGNKIHCLALKFGF 185

Query: 121 GSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEG 180
             D+Y   +++ +Y++ + +G+AR +FDEMP RD+ SW +MIS Y   G+   AL L  G
Sbjct: 186 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 245

Query: 181 MRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 240
           +R +   +SVT++++L AC    D   G  I    +K+GL  ++ + N  + +Y+  G  
Sbjct: 246 LRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 305

Query: 241 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 300
            +  + F  +  ++++SW+ +I  Y      ++A+ +F+++    +    + LT++  A+
Sbjct: 306 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PDCLTLISLAS 365

Query: 301 KTSDSMCLILGENLHSLAIKTG--LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSII 360
             S    +    ++    ++ G  L D  +  +++ MYAK G +D++  +FN +PN  +I
Sbjct: 366 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 425

Query: 361 TWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           +W  ++S + QNG   EA+E+++ M+  G +  + G    ++ A +  GAL+ G  +H  
Sbjct: 426 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 485

Query: 421 LIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGI 480
           L++  GL + +  + TSL +MY +CG +  A   F  I   + V W ++I  +G HG G 
Sbjct: 486 LLK-NGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 545

Query: 481 NALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCF 540
            A+ L+  M+ E V P+ +TF++LLSACSHSGLV EG   F  M++ + I P L+HY C 
Sbjct: 546 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 605

Query: 541 VDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNV 600
           VD+  R+ ++  A   I  M+   D  IWGAL+ ACRV+G+  +   A+  L E+EP++V
Sbjct: 606 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 665

Query: 601 GYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTD 660
           GY+ LLSN  AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H   +
Sbjct: 666 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 725

Query: 661 QIYDLLTLGDVRRTSEQAEPRMGLYT--RRCVSKDARPRRRVDYEMSH 703
           ++Y  L       T+ QA+ +M  Y    R V +D     +    MSH
Sbjct: 726 EMYREL-------TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSH 755

[Close]

BLAST of Carg27656 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.9e-98
Identity = 205/658 (31.16%), Postives = 370/658 (56.23%), Query Frame = 0


Query: 7   QIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSG 66
           ++H   I     D   I + L+ +Y +  +L  A  V +  P  + + W++++ S +++G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 67  LFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFC 126
             + A+ ++K M + GVE D  T   +      +   +  A  VH    R  F  D   C
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQITRKMFDLDETLC 241

Query: 127 NTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF-EGMRRVLE 186
           N+++ +Y+KC  L  + ++F+++  ++ VSWT+MIS+Y        AL  F E ++  +E
Sbjct: 242 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 301

Query: 187 PNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDV-GLQNWFLRMYSRLGGEDEFVR 246
           PN VT+ ++L +C +   +  G+ +    V+  L  +   L    + +Y+  G   +   
Sbjct: 302 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 361

Query: 247 FFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDS 306
               +  +N+V+W+ LIS Y+  G +++A+ +F+Q++   +     TL   ISA + +  
Sbjct: 362 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG- 421

Query: 307 MCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMS 366
             + LG+ +H   I+T + D  ++ SL+DMY+K G +D+++ +FN+I +RS++TW +M+ 
Sbjct: 422 -LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 481

Query: 367 SFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLE 426
            F QNG+  EA+ +F  M  + L+ +      +I A + +G+L+ G+ +H  LI I GL+
Sbjct: 482 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLK 541

Query: 427 ICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHH 486
             +   +T+L++MY +CG + +A   F  +  + +V+W+SMI  YG HG+  +A++ ++ 
Sbjct: 542 --DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 601

Query: 487 MMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRST 546
           M+     PN V F+++LSAC HSG V EG + ++++   F + P+ EH+ CF+DLLSRS 
Sbjct: 602 MVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSG 661

Query: 547 RVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSN 606
            ++EA+  I  M  L D  +WG+L+  CR++    I     + L ++  D+ GYYTLLSN
Sbjct: 662 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSN 721

Query: 607 TQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
             A  G+W E  +LRS +   +L K PG+S IE++  +  F +G+ +  +TD+IY  L
Sbjct: 722 IYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772

[Close]

BLAST of Carg27656 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-98
Identity = 212/669 (31.69%), Postives = 360/669 (53.81%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHT-EPMLWNSII 60
           D+R   ++H+  +      T FI + L+ +Y K +DL +A  + + F    + +LWNSI+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 61  KSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGM-VHCVGIRMG 120
            S   SG  L  + L++ M   G   + +T  I++ +           G  +H   ++  
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSS 316

Query: 121 -FGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF 180
              S+LY CN ++ +Y +C  +  A ++  +M N D+V+W S+I  YV       AL  F
Sbjct: 317 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 376

Query: 181 EGMRRV-LEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRL 240
             M     + + V+M +++ A     +L+ G  +   V+K+G   ++ + N  + MYS+ 
Sbjct: 377 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 436

Query: 241 GGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILI 300
                  R F  +  K+++SW  +I+ Y+     V+A+++F+ +    + +    L  ++
Sbjct: 437 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 496

Query: 301 SATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSI 360
            A+    SM ++  + +H   ++ GL D++++  L+D+Y K   +  +TR+F  I  + +
Sbjct: 497 RASSVLKSMLIV--KEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 556

Query: 361 ITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           ++W +M+SS   NG+  EAVE+F +M   GL      L  ++ A A L AL  GR IHCY
Sbjct: 557 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 616

Query: 421 LIR--ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQ 480
           L+R   C        +  ++++MY  CG + SA+  FD I  K ++ +TSMI  YG HG 
Sbjct: 617 LLRKGFC----LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 676

Query: 481 GINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYT 540
           G  A+ L+  M  E V+P+ ++FL+LL ACSH+GL+ EG      M   + ++P  EHY 
Sbjct: 677 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 736

Query: 541 CFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPD 600
           C VD+L R+  V EAF  +  M       +W AL+ ACR + + +I   AA RLLELEP 
Sbjct: 737 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 796

Query: 601 NVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSK 660
           N G   L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH +
Sbjct: 797 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 856

Query: 661 TDQIYDLLT 664
           + +IY+ L+
Sbjct: 857 SKEIYEKLS 857

[Close]

BLAST of Carg27656 vs. ExPASy TrEMBL
Match: A0A6J1EYH5 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439622 PE=4 SV=1)

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 601/610 (98.52%), Postives = 604/610 (99.02%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRV EPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL
Sbjct: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP
Sbjct: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG+H
Sbjct: 361 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKD VKKPGWSF+ELNG +HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

[Close]

BLAST of Carg27656 vs. ExPASy TrEMBL
Match: A0A6J1HTH3 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467326 PE=4 SV=1)

HSP 1 Score: 1195.6 bits (3092), Expect = 0.0e+00
Identity = 593/610 (97.21%), Postives = 599/610 (98.20%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLF SAIMLYKNMREVGVEHDGFTFPILNHVVMSI VDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFQSAIMLYKNMREVGVEHDGFTFPILNHVVMSICVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVN G IVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGVIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVR FSEIDCKNVVSW+ILISFY SVGDIVKAVDIFKQIM+GEVPLII+TL
Sbjct: 181 YSRLGGEDEFVRVFSEIDCKNVVSWNILISFYFSVGDIVKAVDIFKQIMSGEVPLIIDTL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTS+SMCLILGENLHSLAIKTGLYDSILRTSLLDMYAK GELDNSTRLFNEIP
Sbjct: 241 TILISATKTSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKIGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAV+IFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVDIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRIHGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEK+LVKKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKNLVKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

[Close]

BLAST of Carg27656 vs. ExPASy TrEMBL
Match: A0A1S3C6I7 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497256 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 8.7e-304
Identity = 516/610 (84.59%), Postives = 556/610 (91.15%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWN++IKS  DSGLF SA++LYKNMREV VEHDGFT PI+N V++SIWVDVVY GMVHC
Sbjct: 1   MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGF SDLYFCNTMMEVY KC CL  AR VFDEMPNRDLVSWTSMISAYV  GD+ C
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           AL++FEGMRR LEPNSVT++ MLQACC T++LVLGRL+QC VVKNGLLFD GLQN FLRM
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDE V FFSEID KNVVSW+IL+SFYSS+GDIVK VDI  +IM GEVPL IETL
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIM-GEVPLSIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILIS   TSDS CLILGENLHSLAIK+GLYD IL TSLLDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFD+AV+IF QMQ AGLKPS+GILKHLIDAYA+LGALQLG+ 
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKA 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHC+LIRI GL +CNT LETS++NMYVRCGSIASARKCFDLI++KDVVAWTSMIEGYGAH
Sbjct: 361 IHCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           G GI+ALNL+H M SEEV PN+VTFLSLLSACSHSGLVSEGC IFYSMRSRFNIKPDLEH
Sbjct: 421 GLGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSN+QASVGQWHE EKLRS+VYEK+L KKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            K ++IYDLL
Sbjct: 601 YKANEIYDLL 609

[Close]

BLAST of Carg27656 vs. ExPASy TrEMBL
Match: A0A6J1DKA1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021322 PE=4 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.7e-286
Identity = 491/610 (80.49%), Postives = 539/610 (88.36%), Query Frame = 0


Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKS V+SGLF+SA++LYK MRE+GVEHDGFTFP++N ++MSI +DVVYAGMVHC
Sbjct: 1   MLWNSIIKSHVESGLFVSALLLYKKMRELGVEHDGFTFPMVNRIIMSIQLDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFG+DLYFCNTMMEVY KC CL  AR VFDEMP+RDLVSWTSMIS YV  GD+V 
Sbjct: 61  VGIRMGFGADLYFCNTMMEVYGKCGCLVSARNVFDEMPHRDLVSWTSMISVYVCRGDVVS 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
            L+LFEGMRR LEPNSVT+M M+QACC T +L LGR +Q  V KNGLLFD+GLQN  LRM
Sbjct: 121 GLDLFEGMRRELEPNSVTIMVMVQACCATGNLSLGRQLQSHVFKNGLLFDIGLQNSLLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           Y+RLGGEDE   FFSE+D KNVVSW++ ISFYSS GD VK VDIF +IM GEV L +ETL
Sbjct: 181 YTRLGGEDEVGVFFSEVDRKNVVSWNVFISFYSSRGDFVKVVDIFNKIM-GEVLLSVETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TIL+SAT   DS  LILG+NLHSLAIK+GLYD IL+TS LDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILVSATAAPDSEHLILGKNLHSLAIKSGLYDGILQTSFLDMYAKFGELENSTRLFKEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
            +SIITWGAMMSSFIQNGHFD AVEIF+QMQAAGLKPS+GILKHLIDAY HLG LQLG+ 
Sbjct: 301 RKSIITWGAMMSSFIQNGHFDGAVEIFNQMQAAGLKPSVGILKHLIDAYTHLGVLQLGKA 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIR+ GLEI NT L TS++NMYVRCGS+ SA KCFDLI++KDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRLNGLEIYNTQLGTSILNMYVRCGSLVSAIKCFDLILIKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           G G +ALNL+  MM EEV PN+VTFLSLLSACSHSGLVSEGC+IFYSMRSRFNI PDLEH
Sbjct: 421 GLGFDALNLFLQMMREEVTPNNVTFLSLLSACSHSGLVSEGCQIFYSMRSRFNINPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTN  DGRIWGALMGACRVY DNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNFRDGRIWGALMGACRVYEDNKIANYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSN QA+VGQWH+VEKLRSVVYEKDLVKKPGWSFIEL GI+HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNAQATVGQWHDVEKLRSVVYEKDLVKKPGWSFIELKGIVHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KT +IYDLL
Sbjct: 601 DKTKEIYDLL 609

[Close]

BLAST of Carg27656 vs. ExPASy TrEMBL
Match: A0A6P5TSX7 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110770265 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 1.4e-213
Identity = 380/665 (57.14%), Postives = 488/665 (73.38%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           DL+ L+Q+HA  ++S+GF    + SK+I LY +FN + SA  V  +      MLWN IIK
Sbjct: 111 DLQTLRQVHARILVSTGFKPPSLLSKVITLYSRFNGVESAALVFRSIQEPNTMLWNLIIK 170

Query: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120
           S VDSGL  SA++LYK M E+GV HD FTFPI+N  V+ +  D  Y+GMVHCV I++GFG
Sbjct: 171 SHVDSGLLGSALLLYKKMLELGVSHDCFTFPIVNRAVLLLGSDATYSGMVHCVAIQIGFG 230

Query: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180
            D+Y  NTM++ Y KC  L +ARK+FDEM  RDLV+WTSMIS YV+ G++ C  +LF  M
Sbjct: 231 MDVYVGNTMIDAYVKCGRLDYARKLFDEMRQRDLVTWTSMISGYVSEGNVACGFSLFSEM 290

Query: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240
           RR LEPN+VTM+ MLQ CC  E  V G  +    +K+GLL D  +QN   RMY++LG  D
Sbjct: 291 RRELEPNAVTMLVMLQGCCDIEISVYGEPLHGYGIKSGLLNDGSVQNSIFRMYAKLGTVD 350

Query: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300
           +   FF E+D ++VVSW+I ISFYS  GD+VK +D+F + M GEV    ETLT++ISA  
Sbjct: 351 QVEDFFIELDRRDVVSWNIRISFYSWRGDVVKVIDLFHE-MQGEVAPSSETLTLVISA-- 410

Query: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360
            +    L  GE+LH LA K+GL D +L+TSLLD YAK GEL NS +LF E+P+R+ ITWG
Sbjct: 411 LTKHGILSQGESLHCLATKSGLCDDVLQTSLLDFYAKCGELGNSDKLFREMPHRNSITWG 470

Query: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIR- 420
           AMM  FIQNG F+EAV +F +MQAAG++P   IL+ L+DA+A+LGAL+LG+GIH  +IR 
Sbjct: 471 AMMFGFIQNGCFNEAVGLFGRMQAAGVEPGAEILRSLVDAFANLGALKLGKGIHGCIIRK 530

Query: 421 -ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 480
             C  E CNTHLETSL+NMY+RCGSI++AR CF  ++++D+VAWTSMIEGYG+HG G+ A
Sbjct: 531 SFCDAEKCNTHLETSLINMYIRCGSISTARVCFSRMLIRDIVAWTSMIEGYGSHGLGLEA 590

Query: 481 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 540
           L L+  M+ E   PNSVT LSLLSACSHSGLV+EGCE F SM+ +F I+PDL+HYT  VD
Sbjct: 591 LKLFDLMIREGTKPNSVTILSLLSACSHSGLVTEGCEAFCSMKWKFGIEPDLDHYTSIVD 650

Query: 541 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 600
           LL RS +++EA   I++M +  D RIWGAL+   R+YG   +  +AA RLLELEPDNVGY
Sbjct: 651 LLGRSGKLKEALVFIMKMASFPDSRIWGALLSGSRIYGRRDVGEFAAQRLLELEPDNVGY 710

Query: 601 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIEL-NGIIHGFVSGDRSHSKTDQ 660
           YTLLSNTQASVG+W EVE++R V+ E+DL KKPGWS IE   G I+GFVSGDRSH +T+ 
Sbjct: 711 YTLLSNTQASVGEWDEVEEIRRVMKERDLKKKPGWSCIEAEEGRIYGFVSGDRSHHQTEA 770

Query: 661 IYDLL 663
           IY++L
Sbjct: 771 IYEVL 772

[Close]

BLAST of Carg27656 vs. TAIR 10
Match: AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 392.1 bits (1006), Expect = 9.5e-109
Identity = 215/643 (33.44%), Postives = 362/643 (56.30%), Query Frame = 0


Query: 25  SKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVE 84
           ++ +R +     +  A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 85  HDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARK 144
            D FT+P +   V  I   +     +H + I++GF SD+Y CN+++ +Y K  C   A K
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 145 VFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRV-LEPNSVTMMAMLQACCVTED 204
           VF+EMP RD+VSW SMIS Y+ +GD   +L LF+ M +   +P+  + M+ L AC     
Sbjct: 188 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 247

Query: 205 LVLGRLIQCLVVKNGL-LFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILIS 264
             +G+ I C  V++ +   DV +    L MYS+ G      R F+ +  +N+V+W+++I 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 265 FYSSVGDIVKAVDIFKQI--MAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKT 324
            Y+  G +  A   F+++    G  P +I ++ +L        +  ++ G  +H  A++ 
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL-------PASAILEGRTIHGYAMRR 367

Query: 325 G-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIF 384
           G L   +L T+L+DMY + G+L ++  +F+ +  +++I+W +++++++QNG    A+E+F
Sbjct: 368 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 427

Query: 385 SQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYV 444
            ++  + L P    +  ++ AYA   +L  GR IH Y+++       NT +  SL++MY 
Sbjct: 428 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYA 487

Query: 445 RCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLS 504
            CG +  ARKCF+ I++KDVV+W S+I  Y  HG G  ++ L+  M++  V PN  TF S
Sbjct: 488 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 547

Query: 505 LLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNL 564
           LL+ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A   +  M  +
Sbjct: 548 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 607

Query: 565 CDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLR 624
              RIWG+L+ A R + D  IA +AA ++ ++E DN G Y LL N  A  G+W +V +++
Sbjct: 608 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 667

Query: 625 SVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
            ++  K + +    S +E  G  H F +GDRSH  T++IY++L
Sbjct: 668 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

[Close]

BLAST of Carg27656 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 362.8 bits (930), Expect = 6.1e-100
Identity = 210/655 (32.06%), Postives = 362/655 (55.27%), Query Frame = 0


Query: 13  ILSSGFDT-VFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSA 72
           IL  GF++ +F+ + L+ +Y +   L  A  V +  P  + + WNS+I      G +  A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 73  IMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMME 132
           + +Y  ++   +  D FT   +     ++ V V     +H   ++ G  S +   N ++ 
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLV-VKQGQGLHGFALKSGVNSVVVVNNGLVA 251

Query: 133 VYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTM 192
           +Y K      AR+VFDEM  RD VS+ +MI  Y+ +  +  ++ +F       +P+ +T+
Sbjct: 252 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTV 311

Query: 193 MAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDC 252
            ++L+AC    DL L + I   ++K G + +  ++N  + +Y++ G        F+ ++C
Sbjct: 312 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 371

Query: 253 KNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILIS-ATKTSDSMCLILG 312
           K+ VSW+ +IS Y   GD+++A+ +FK +M  E      T  +LIS +T+ +D   L  G
Sbjct: 372 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD---LKFG 431

Query: 313 ENLHSLAIKTGL-YDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQN 372
           + LHS  IK+G+  D  +  +L+DMYAK GE+ +S ++F+ +     +TW  ++S+ ++ 
Sbjct: 432 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 491

Query: 373 GHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTH 432
           G F   +++ +QM+ + + P +      +   A L A +LG+ IHC L+R  G E     
Sbjct: 492 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF-GYE-SELQ 551

Query: 433 LETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEE 492
           +  +L+ MY +CG + ++ + F+ +  +DVV WT MI  YG +G+G  AL  +  M    
Sbjct: 552 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 611

Query: 493 VAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREA 552
           + P+SV F++++ ACSHSGLV EG   F  M++ + I P +EHY C VDLLSRS ++ +A
Sbjct: 612 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 671

Query: 553 FAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASV 612
              I  M    D  IW +++ ACR  GD + A   + R++EL PD+ GY  L SN  A++
Sbjct: 672 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 731

Query: 613 GQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTL 665
            +W +V  +R  + +K + K PG+S+IE+   +H F SGD S  +++ IY  L +
Sbjct: 732 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEI 780

[Close]

BLAST of Carg27656 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 362.1 bits (928), Expect = 1.0e-99
Identity = 220/708 (31.07%), Postives = 383/708 (54.10%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           +L+  K +HA  ++S     V I++KL+ LY    ++  A    +   + +   WN +I 
Sbjct: 66  NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 61  SQVDSGLFLSAIMLYK-NMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGF 120
               +G     I  +   M   G+  D  TFP     V+     V+    +HC+ ++ GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP----SVLKACRTVIDGNKIHCLALKFGF 185

Query: 121 GSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEG 180
             D+Y   +++ +Y++ + +G+AR +FDEMP RD+ SW +MIS Y   G+   AL L  G
Sbjct: 186 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 245

Query: 181 MRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 240
           +R +   +SVT++++L AC    D   G  I    +K+GL  ++ + N  + +Y+  G  
Sbjct: 246 LRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 305

Query: 241 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 300
            +  + F  +  ++++SW+ +I  Y      ++A+ +F+++    +    + LT++  A+
Sbjct: 306 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PDCLTLISLAS 365

Query: 301 KTSDSMCLILGENLHSLAIKTG--LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSII 360
             S    +    ++    ++ G  L D  +  +++ MYAK G +D++  +FN +PN  +I
Sbjct: 366 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 425

Query: 361 TWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           +W  ++S + QNG   EA+E+++ M+  G +  + G    ++ A +  GAL+ G  +H  
Sbjct: 426 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 485

Query: 421 LIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGI 480
           L++  GL + +  + TSL +MY +CG +  A   F  I   + V W ++I  +G HG G 
Sbjct: 486 LLK-NGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 545

Query: 481 NALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCF 540
            A+ L+  M+ E V P+ +TF++LLSACSHSGLV EG   F  M++ + I P L+HY C 
Sbjct: 546 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 605

Query: 541 VDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNV 600
           VD+  R+ ++  A   I  M+   D  IWGAL+ ACRV+G+  +   A+  L E+EP++V
Sbjct: 606 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 665

Query: 601 GYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTD 660
           GY+ LLSN  AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H   +
Sbjct: 666 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 725

Query: 661 QIYDLLTLGDVRRTSEQAEPRMGLYT--RRCVSKDARPRRRVDYEMSH 703
           ++Y  L       T+ QA+ +M  Y    R V +D     +    MSH
Sbjct: 726 EMYREL-------TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSH 755

[Close]

BLAST of Carg27656 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 361.7 bits (927), Expect = 1.4e-99
Identity = 205/658 (31.16%), Postives = 370/658 (56.23%), Query Frame = 0


Query: 7   QIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSG 66
           ++H   I     D   I + L+ +Y +  +L  A  V +  P  + + W++++ S +++G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 67  LFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFC 126
             + A+ ++K M + GVE D  T   +      +   +  A  VH    R  F  D   C
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQITRKMFDLDETLC 241

Query: 127 NTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF-EGMRRVLE 186
           N+++ +Y+KC  L  + ++F+++  ++ VSWT+MIS+Y        AL  F E ++  +E
Sbjct: 242 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 301

Query: 187 PNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDV-GLQNWFLRMYSRLGGEDEFVR 246
           PN VT+ ++L +C +   +  G+ +    V+  L  +   L    + +Y+  G   +   
Sbjct: 302 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 361

Query: 247 FFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDS 306
               +  +N+V+W+ LIS Y+  G +++A+ +F+Q++   +     TL   ISA + +  
Sbjct: 362 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG- 421

Query: 307 MCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMS 366
             + LG+ +H   I+T + D  ++ SL+DMY+K G +D+++ +FN+I +RS++TW +M+ 
Sbjct: 422 -LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 481

Query: 367 SFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLE 426
            F QNG+  EA+ +F  M  + L+ +      +I A + +G+L+ G+ +H  LI I GL+
Sbjct: 482 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLK 541

Query: 427 ICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHH 486
             +   +T+L++MY +CG + +A   F  +  + +V+W+SMI  YG HG+  +A++ ++ 
Sbjct: 542 --DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 601

Query: 487 MMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRST 546
           M+     PN V F+++LSAC HSG V EG + ++++   F + P+ EH+ CF+DLLSRS 
Sbjct: 602 MVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSG 661

Query: 547 RVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSN 606
            ++EA+  I  M  L D  +WG+L+  CR++    I     + L ++  D+ GYYTLLSN
Sbjct: 662 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSN 721

Query: 607 TQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
             A  G+W E  +LRS +   +L K PG+S IE++  +  F +G+ +  +TD+IY  L
Sbjct: 722 IYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772

[Close]

BLAST of Carg27656 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 360.5 bits (924), Expect = 3.0e-99
Identity = 216/686 (31.49%), Postives = 367/686 (53.50%), Query Frame = 0


Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHT-EPMLWNSII 60
           D+R   ++H+  +      T FI + L+ +Y K +DL +A  + + F    + +LWNSI+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 61  KSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGM-VHCVGIRMG 120
            S   SG  L  + L++ M   G   + +T  I++ +           G  +H   ++  
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSS 316

Query: 121 -FGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF 180
              S+LY CN ++ +Y +C  +  A ++  +M N D+V+W S+I  YV       AL  F
Sbjct: 317 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 376

Query: 181 EGMRRV-LEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRL 240
             M     + + V+M +++ A     +L+ G  +   V+K+G   ++ + N  + MYS+ 
Sbjct: 377 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 436

Query: 241 GGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILI 300
                  R F  +  K+++SW  +I+ Y+     V+A+++F+ +    + +    L  ++
Sbjct: 437 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 496

Query: 301 SATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSI 360
            A+    SM ++  + +H   ++ GL D++++  L+D+Y K   +  +TR+F  I  + +
Sbjct: 497 RASSVLKSMLIV--KEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 556

Query: 361 ITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           ++W +M+SS   NG+  EAVE+F +M   GL      L  ++ A A L AL  GR IHCY
Sbjct: 557 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 616

Query: 421 LIR--ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQ 480
           L+R   C        +  ++++MY  CG + SA+  FD I  K ++ +TSMI  YG HG 
Sbjct: 617 LLRKGFC----LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 676

Query: 481 GINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYT 540
           G  A+ L+  M  E V+P+ ++FL+LL ACSH+GL+ EG      M   + ++P  EHY 
Sbjct: 677 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 736

Query: 541 CFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPD 600
           C VD+L R+  V EAF  +  M       +W AL+ ACR + + +I   AA RLLELEP 
Sbjct: 737 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 796

Query: 601 NVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSK 660
           N G   L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH +
Sbjct: 797 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 856

Query: 661 TDQIYDLLTLGDVRRTSEQAEPRMGL 681
           + +IY+   L +V R  E+ + +  L
Sbjct: 857 SKEIYE--KLSEVTRKLEREKGKREL 872

The following BLAST results are available for this feature:

BLAST of Carg27656 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033612.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_023526509.1	0.0e+00	98.34	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur...	[more]
KAG6603417.1	0.0e+00	99.34	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022932989.1	0.0e+00	98.52	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur...	[more]
XP_022967941.1	0.0e+00	97.21	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur...	[more]

BLAST of Carg27656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49619	1.3e-107	33.44	Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop...	[more]
Q9SS60	8.6e-99	32.06	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX...	[more]
O81767	1.5e-98	31.07	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX...	[more]
Q9C507	1.9e-98	31.16	Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS...	[more]
Q9M1V3	4.3e-98	31.69	Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop...	[more]

BLAST of Carg27656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYH5	0.0e+00	98.52	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cuc...	[more]
A0A6J1HTH3	0.0e+00	97.21	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cuc...	[more]
A0A1S3C6I7	8.7e-304	84.59	pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis ...	[more]
A0A6J1DKA1	1.7e-286	80.49	pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Mom...	[more]
A0A6P5TSX7	1.4e-213	57.14	pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like OS=Pru...	[more]

BLAST of Carg27656 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35130.1	9.5e-109	33.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G03580.1	6.1e-100	32.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G33990.1	1.0e-99	31.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G69350.1	1.4e-99	31.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G63370.1	3.0e-99	31.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 109..206 e-value: 8.8E-21 score: 76.1 coord: 207..308 e-value: 4.3E-9 score: 37.9 coord: 15..100 e-value: 9.1E-6 score: 27.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 425..644 e-value: 4.5E-33 score: 116.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 309..422 e-value: 2.4E-17 score: 65.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 317..617
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 55..83 e-value: 0.11 score: 12.7 coord: 255..280 e-value: 0.041 score: 14.1 coord: 357..386 e-value: 1.2E-6 score: 28.4 coord: 329..354 e-value: 0.47 score: 10.8 coord: 126..152 e-value: 0.0012 score: 18.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 495..529 e-value: 1.2E-4 score: 20.0 coord: 255..282 e-value: 0.0026 score: 15.8 coord: 460..493 e-value: 1.1E-4 score: 20.2 coord: 155..182 e-value: 2.8E-4 score: 18.9 coord: 126..154 e-value: 1.7E-4 score: 19.6 coord: 357..390 e-value: 1.4E-8 score: 32.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 457..505 e-value: 9.5E-10 score: 38.5 coord: 153..199 e-value: 1.6E-7 score: 31.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 12.726127
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 493..523 score: 8.637562
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 253..287 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 122..156 score: 9.262356
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 458..492 score: 10.413293
None	No IPR available	PANTHER	PTHR47928:SF75	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 5..657
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 5..657

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27656-RA	Carg27656-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding