Carg27642 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27642
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Plant protein of unknown function (DUF247)
Location	Carg_Chr09: 11955437 .. 11960483 (+)
RNA-Seq Expression	Carg27642
Synteny	Carg27642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACAAAACACCCCATGAAACCAATTGGGTTGTTCATATCACCCAACTTCTCCAACCAAATACCCTCCAAACAGCCTTACAAACGCCCACTTCCATCTTCAAGCTGCCTCATTCCATCACCAATGGCATGCCACAACCTTACTTCCCTCGCCACATTGCGCTTGGGCCTTACCACCACTTGACAGACAAGCTCTACCAAATGGAATTACACAAGCTCGATAACGCAATCAACGCAATACAATCATTCAAACTCCCCCAACTCCATCAAATCGCCTCTGATCTCGAGCAATTCGATATCAAAATCCGATCTTGTTACGACAAATTTCTCGATTTCGGGTCCGAGGCGTTGGCTTGGACTATGCTCATAGATGGGTTGTTTTTGGTTCAACTTCTAGCCATTTCCAATGATAAAATAGATGAGATCAGAAGATCATATCCTCAACTTTATTACCCTTCTCCATTTCCTTCGTTTGTTGAACAAAGGTTGTATGGTTGTCTAATTGAGGCAAATTTGATGACCCAAGATGAGTTAGTGAATGATGTTCTTAAGCTCGAGAATCAAATTCCAATTTTTGTTATCAAAAAAATTTTGCCACAAAATTTAGGGAACAATTTGCATATCTTGTTGTTCAGATTTTGTGAGGTTGTTTCCCCCAAGAAGCTCCCTCCTCATGATCTTCGTGAATTCAAGCGTTACAATGGCTCCACTGATGTATACCAAATTCTTGAACAATCCCATCATTTGCTTCACTTTTTGTATCTATTGATTATGGTGATCCCGTCGGCCGAGCAGCTTAGACGGGTCGGAGTCAAGTTAGAAGGCAACAACAAGGCCTTCCATAAAAGCATCAAGTTTGTTAAATCACAAGATAATTTTTTTTAAGCATTCTTTACAAGGTGTGTTCACACCTCTCCTACAGAGCGTTTTAAGACTGTGAGACTGACGGCTATACGTAACGAGGCAAAACAGGCAATATCTACTAGCGGTGGGCTTGGGGTGTTACAAATGATATAAGAGTCAGCACCGAGCGGTGTGCCAGCGAGAACGTTGGGTCCCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGTGGAACGAAGCATTTCATTTAAGAGTGTAGAAACCTCTCCCTAGCAAATGCGTTTTAAAATCATGAGGCTGACTGCAATATGTAACGAGCTAAAATAGACAATATCTGCTAGCGGTGGATATGCTTGTTACAAATGGTTTCAGAGCTAGCACTAAGCGGTATGCCTGTGAGGACGCTGGGTCCCCAATGAGGGTGGATTGTGAGATCCCACATTAGTTGGAGAGATGAACGAAATATTCCATATAAGAGTGTGGAAACATCTTCCTAGCAGACGCGTTTTAAAATCGTAAGGCTGACGACGGTACGTAACGAGCTAAAACAGACAATATTTACTAGCAATGGGCTTGAACTGTTACAAAAAGGTATTAGAGTAGTACCGAGCGGTGTGCTAGCAAGGACGCTAGGTCCCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAACGAAGCATTCCATATAACGGTGTGGAAACGTCTCCCTAGCAGATACGTTTCAAAACAGTGAAGCTGACGACCATATGTAACGAGCCAAAGTAGACGATATCTGTTAACGGTGGGCTTAGGCTGTTATACTTACATAGATTAAAGTTTTGGGTTGGTCGGTGATTTAACTATTTATTCATATTCTTTTGACAAGGTTCAAGCAAGAATCCAGAAAATCTTGTTTAGATTTGCTGACGATCACCATTAATGCCTTCTTAGAAGTAGTATTCAGAAATCTAGTGGCGTTCGAAGTAGCGACTAAACTAAACCCGCCATGCTTTAGCAATTATGTAGCATTGATGAGCGGGTTGATAACAACAACCAAAGATGTCAAGATATTGAAGGAAGCAAGCATTATTAAGAGGCACTCCGGAAGTGAAGAAAAAGTAGTGAAACTGTTTGATGGGCTAAAAAATGTGTTGGAGCTTCACCAACATAGTGATAATTTGTGTAGAATCAATAACATGGCTAAGATTCAAATCGTTAAAGATATCAATAGCTATTACGAAAGCTGCTGGACGGTGAAAGCCAAGAGATTCATCCAAAAATATATCAATCCAGTGATGAAGGTGATCGTTCTTGTTGTTGTGATTTTGCTCATTGGTGTCGTTGTTTTACGCACGTTTTGTGGTTGGTTTGGTTGCTCTAGAATTTTGAATGTGGTTTCTCCTATTATTATTGATAATTTTCAAAATTTTCTTTAGTTGATTTTCTCCTATTGTTATTGAGAAAAGGCATTCATAACACTTGATCAATGAAAAGCTTCAATTCTAAGTGATCACATGCACCTTCAATTTGCAGCTATTATAAAGAGTTCTTTGGGGTTTCAATTAAACTTTTATAAATAAGTTGAGCTGTGTAACAATTAGTTTTTCGAAGGTTTGAATGGCTTGCCACGTAGACTCAAGGGTAAAAAATGTATAAAAGTTTTGAATTTTGTAAAACAGAAGACACAAGGAATTAAATTCAAATATAAACGGTAGAACTGATATTAAAAGTCTTAAAAGTACAAAACATGTTTGTGAAGTCAACGAAAAAATAGTTTACAATATATCATTGTTGAACATGGTTTCTTGACTTGCTAACAAATTCTCAAACTCTGTAAGTGATGCTTGAGGGGTCATTCTTTTACAGTAATAATGAAGCTTCTATATTCTGGTCGCAATCCTTGGATAATGATCCTCTTTATTCGAGCTTCTCCAATAACGGACTTTGGGTTTAGTTTAGTAATCTCTCAACAGATTGACTTGATCCTGTGAAAGTACTGAGTAATCGTAACGTCACATTGTGAGATTGATAATAGTTCGTTCTCCAAAGCTGTAGCCTCGTATCGTTCTTCTTTGAAAATAACATTACGAACGTGTCCCATGCTTCTTTCGGTGTCTTGTTATCTCAAATGTGCTATAACATCTCTTCTTCAATTGTGGTCTTCAAGATAAACATTACTTTGCCGGCTTTGATTCTCTATTTTCACAAAGTGCCATTAGTTTCTTCCTCTGACGGCGTAGTTTCACTGCCACCAACGACCTCCCAAAGGTTCTGTCCTTGTAAATAGAACATCATGAATGTTGCCCACATGTTGTAATTGTTGTTGCTGAGTTTCTTGATTCCTCCAATGATTTAAAAATCACTCCTCGTGTTCACTATACCTTAGTACTGCTCACAACACAAAGAAAATCACCCATCGTGTTGGCTATACCTTAGTACTACTCACGACACAAAGAAATTCACTCACTAATAATTTCAAGGAATCGTTTCTGATGTGGAAGATCAGATACAGCTGCAACAACAGATCATACTAAGAATTCAAAGAGATTAGACAACTTATACTAACCTTGCTCTGATACCAGTCTATTGAACATAACTCATACAGCTGCAACAACAGATCATACTAAGAATTCAAAGAGATTAGACAACTTATACTAACCTTGCTCTGATACCAGTCTATTGAACATAACTCTTTACTGTCTTCAATCGAGAAGCCACTAAAAATGGCATGTTAGAAACCAGGGATCTCGTACACCCTTTGTTCGATACTTTAGTCACCTGACTACACCTTCTCTAATTCTTTACACCCTTCGCTCCAATGTTTAGAAACCAGGGATCTCGTAGATAAAGTTCTGCCACTGGCATGAGAAACCAGATTCTTGGATGAGTATTTATAGCAGAGACTAAACAAGTGCCACTAAAAATGGCATGTTAGAAACCAGGGATCTCTACACCCTTTGTTGAACACTTTAGTCACCTTTGACTACACCTTCGAGACTCACAATTCTTTACACCCTTTGCCACTAAAAATGGCATGTTAGAAACAAGGATTATTCAATATATGAGGAATCACCCATCTCCATAATGGCATAGTATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTTTCCCAAAAGGCCTCATACCAATGGAGATAATATTCCTCACTTATAAACCCATGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCTAATAATCCTTAACATGGCCTACGATCCATTCGTAAATAAAGAATTGCAAGAATGAACATAAAAATAATTAGTAAACAATACTTCTAGGCTCTCATCGAAACTTCTCATATTTAGTGTTCTTAAGATATGTTCTCAATAAGGTTTCTAGTGTTAGCCAATTCTATAGCTCAAGTTCTTTCCTAGCCCTCTTAGTAGGGTTGTACATGGGTTTGGTCGGGTTGGATTGAGAATTATTTTTGGAAAAACCCAAAAGTTCAATTGGTTGGATTGATAACCTAACCCAATCCGTAATTCTTTCACAACCCAACCCTATATACTTTTGGGTTGGGTTTGAGTTTTGGTTGTTCAAACAAAATTAATTTTTTTAAAAACTCTTATTTATGGGGTATAAACCTGGAATAAGAATGTTGAATGCGATACGAAGAGGAAGAAGAAGAACTCTTGGGTTGTTGTAGTACAAACCTCGAACATGAATATCGAATATGTGGAGGCTACTGGCCCTGATTGCTTGCGGGAAGAACTCGAAGGCTGAAGTCTGATGCGATGCAAGGAGGAAGAAAAACTTGAAGTATGATGCGATGCAAGGAGGAAGAAAAACTTGAAGTATGATGCGACGTGAACGACGAATGCGATGGAGCGATGGAGATAAGGGTTTTCTTTTATGTCTTCTCTTCTCTTTTGATGCATGTGGCTTGTGTTAATGGCTTGATGTGACTACGAGGAGTACTGCCAATGACGAGGGAAAATGGTCTCTCGTCTAGTACCAATGCGGGTCTGGAGTTGAGTCTGAATAGAACTGGGCTCGAGTCATTGCGCTTGAAAAGCTTTTGCCTTTTGCTGAGTTGTTGCGTATTGGGCTCTTCTTTTTTTGTTTTTTTTTATAATAAAATCAGGTCAATTTGAGTTGACTCGATTCTTTGCACCTGAACTCGAATCAGACCCTAATCCACATGATTTGCAC

mRNA sequence

CTTCACAAAACACCCCATGAAACCAATTGGGTTGTTCATATCACCCAACTTCTCCAACCAAATACCCTCCAAACAGCCTTACAAACGCCCACTTCCATCTTCAAGCTGCCTCATTCCATCACCAATGGCATGCCACAACCTTACTTCCCTCGCCACATTGCGCTTGGGCCTTACCACCACTTGACAGACAAGCTCTACCAAATGGAATTACACAAGCTCGATAACGCAATCAACGCAATACAATCATTCAAACTCCCCCAACTCCATCAAATCGCCTCTGATCTCGAGCAATTCGATATCAAAATCCGATCTTGTTACGACAAATTTCTCGATTTCGGGTCCGAGGCGTTGGCTTGGACTATGCTCATAGATGGGTTGTTTTTGGTTCAACTTCTAGCCATTTCCAATGATAAAATAGATGAGATCAGAAGATCATATCCTCAACTTTATTACCCTTCTCCATTTCCTTCGTTTGTTGAACAAAGGTTGTATGGTTGTCTAATTGAGGCAAATTTGATGACCCAAGATGAGTTAGTGAATGATGTTCTTAAGCTCGAGAATCAAATTCCAATTTTTGTTATCAAAAAAATTTTGCCACAAAATTTAGGGAACAATTTGCATATCTTGTTGTTCAGATTTTGTGAGGTTGTTTCCCCCAAGAAGCTCCCTCCTCATGATCTTCGTGAATTCAAGCGTTACAATGGCTCCACTGATGTATACCAAATTCTTGAACAATCCCATCATTTGCTTCACTTTTTGTATCTATTGATTATGGTGATCCCGTCGGCCGAGCAGCTTAGACGGGTCGGAGTCAAAAATCTAGTGGCGTTCGAAGTAGCGACTAAACTAAACCCGCCATGCTTTAGCAATTATGTAGCATTGATGAGCGGGTTGATAACAACAACCAAAGATGTCAAGATATTGAAGGAAGCAAGCATTATTAAGAGGCACTCCGGAAGTGAAGAAAAAGTAGTGAAACTGTTTGATGGGCTAAAAAATGTGTTGGAGCTTCACCAACATAGTGATAATTTGTGTAGAATCAATAACATGGCTAAGATTCAAATCGTTAAAGATATCAATAGCTATTACGAAAGCTGCTGGACGGTGAAAGCCAAGAGATTCATCCAAAAATATATCAATCCAGTGATGAAGGTGATCGTTCTTGTTGTTGTGATTTTGCTCATTGGTGTCGTTGTTTTACGCACGTTTTGTGGTCAATTTGAGTTGACTCGATTCTTTGCACCTGAACTCGAATCAGACCCTAATCCACATGATTTGCAC

Coding sequence (CDS)

CTTCACAAAACACCCCATGAAACCAATTGGGTTGTTCATATCACCCAACTTCTCCAACCAAATACCCTCCAAACAGCCTTACAAACGCCCACTTCCATCTTCAAGCTGCCTCATTCCATCACCAATGGCATGCCACAACCTTACTTCCCTCGCCACATTGCGCTTGGGCCTTACCACCACTTGACAGACAAGCTCTACCAAATGGAATTACACAAGCTCGATAACGCAATCAACGCAATACAATCATTCAAACTCCCCCAACTCCATCAAATCGCCTCTGATCTCGAGCAATTCGATATCAAAATCCGATCTTGTTACGACAAATTTCTCGATTTCGGGTCCGAGGCGTTGGCTTGGACTATGCTCATAGATGGGTTGTTTTTGGTTCAACTTCTAGCCATTTCCAATGATAAAATAGATGAGATCAGAAGATCATATCCTCAACTTTATTACCCTTCTCCATTTCCTTCGTTTGTTGAACAAAGGTTGTATGGTTGTCTAATTGAGGCAAATTTGATGACCCAAGATGAGTTAGTGAATGATGTTCTTAAGCTCGAGAATCAAATTCCAATTTTTGTTATCAAAAAAATTTTGCCACAAAATTTAGGGAACAATTTGCATATCTTGTTGTTCAGATTTTGTGAGGTTGTTTCCCCCAAGAAGCTCCCTCCTCATGATCTTCGTGAATTCAAGCGTTACAATGGCTCCACTGATGTATACCAAATTCTTGAACAATCCCATCATTTGCTTCACTTTTTGTATCTATTGATTATGGTGATCCCGTCGGCCGAGCAGCTTAGACGGGTCGGAGTCAAAAATCTAGTGGCGTTCGAAGTAGCGACTAAACTAAACCCGCCATGCTTTAGCAATTATGTAGCATTGATGAGCGGGTTGATAACAACAACCAAAGATGTCAAGATATTGAAGGAAGCAAGCATTATTAAGAGGCACTCCGGAAGTGAAGAAAAAGTAGTGAAACTGTTTGATGGGCTAAAAAATGTGTTGGAGCTTCACCAACATAGTGATAATTTGTGTAGAATCAATAACATGGCTAAGATTCAAATCGTTAAAGATATCAATAGCTATTACGAAAGCTGCTGGACGGTGAAAGCCAAGAGATTCATCCAAAAATATATCAATCCAGTGATGAAGGTGATCGTTCTTGTTGTTGTGATTTTGCTCATTGGTGTCGTTGTTTTACGCACGTTTTGTGGTCAATTTGAGTTGACTCGATTCTTTGCACCTGAACTCGAATCAGACCCTAATCCACATGATTTGCAC

Protein sequence

LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHHLTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWTMLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVNDVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVYQILEQSHHLLHFLYLLIMVIPSAEQLRRVGVKNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNLCRINNMAKIQIVKDINSYYESCWTVKAKRFIQKYINPVMKVIVLVVVILLIGVVVLRTFCGQFELTRFFAPELESDPNPHDLH

Homology

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BLAST of Carg27642 vs. NCBI nr
Match: KAG7025195.1 (putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 854.4 bits (2206), Expect = 4.3e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH
Sbjct: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
           LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT
Sbjct: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN
Sbjct: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY
Sbjct: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240

Query: 241 QILEQSHHLLHFLYLLIMVIPSAEQLRRVGVKNLVAFEVATKLNPPCFSNYVALMSGLIT 300
           QILEQSHHLLHFLYLLIMVIPSAEQLRRVGVKNLVAFEVATKLNPPCFSNYVALMSGLIT
Sbjct: 241 QILEQSHHLLHFLYLLIMVIPSAEQLRRVGVKNLVAFEVATKLNPPCFSNYVALMSGLIT 300

Query: 301 TTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNLCRINNMAKIQIVKDIN 360
           TTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNLCRINNMAKIQIVKDIN
Sbjct: 301 TTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNLCRINNMAKIQIVKDIN 360

Query: 361 SYYESCWTVKAKRFIQKYINPVMKVIVLVVVILLIGVVVLRTFCGQFELTRFFAPELESD 420
           SYYESCWTVKAKRFIQKYINPVMKVIVLVVVILLIGVVVLRTFCGQFELTRFFAPELESD
Sbjct: 361 SYYESCWTVKAKRFIQKYINPVMKVIVLVVVILLIGVVVLRTFCGQFELTRFFAPELESD 420

Query: 421 PNPHDLH 428
           PNPHDLH
Sbjct: 421 PNPHDLH 427

[Close]

BLAST of Carg27642 vs. NCBI nr
Match: XP_023535328.1 (putative UPF0481 protein At3g02645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 723.0 bits (1865), Expect = 1.5e-204
Identity = 386/521 (74.09%), Postives = 400/521 (76.78%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHET+WVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETHWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
            T+KLYQMELHKLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCY+KFLDFGSEALAW 
Sbjct: 68  FTNKLYQMELHKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYEKFLDFGSEALAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQ+LAISNDKIDEIRRSYPQLYYPSPFP FVEQRLYGCLIEANLMTQ+ELVN
Sbjct: 128 MLIDGLFLVQILAISNDKIDEIRRSYPQLYYPSPFPWFVEQRLYGCLIEANLMTQNELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           DVLKLENQIPIFV+KKILPQN GNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY
Sbjct: 188 DVLKLENQIPIFVLKKILPQNFGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLIM                                          
Sbjct: 248 QILEQSHHLLHFLYLLIMDTSSIIDDLVGMECSGNHFLLDLFNVLGSVLQIPFLQQLCEA 307

Query: 301 -----------------------------VIPSAEQLRRVGV------------------ 360
                                        +IPSAEQLRRVGV                  
Sbjct: 308 VGLIQALFGLHGRVGSSSSSTGEDMNGLPLIPSAEQLRRVGVKLEGNNKAFHKSIRFEQE 367

Query: 361 ---------------------KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 412
                                KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE
Sbjct: 368 SRKSCLELPTITINAFSEVVLKNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 427

[Close]

BLAST of Carg27642 vs. NCBI nr
Match: XP_022925441.1 (putative UPF0481 protein At3g02645 [Cucurbita moschata])

HSP 1 Score: 631.3 bits (1627), Expect = 5.9e-177
Identity = 341/517 (65.96%), Postives = 371/517 (71.76%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
            T+KLYQMELHKLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCYDKFLDFGSE LAW 
Sbjct: 68  FTNKLYQMELHKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYDKFLDFGSETLAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           ML+DGLFLVQ+LAISND+ +E RRSYP+LY+P PFPSF+EQ+LY  LIEANLMTQ+ELVN
Sbjct: 128 MLLDGLFLVQILAISNDETNERRRSYPELYFPYPFPSFIEQKLYCSLIEANLMTQNELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           DVLKLENQIPIFV+KKILPQN GNNLHIL F+FCEV+SPKKLPPHDL EFKRY  STDVY
Sbjct: 188 DVLKLENQIPIFVLKKILPQNFGNNLHILFFKFCEVISPKKLPPHDLIEFKRYKDSTDVY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLI+                                          
Sbjct: 248 QILEQSHHLLHFLYLLILDTSSHIRGPCEMADSGGYLFLDFFSVFVSVLQIPTLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGV------------------ 360
                                        +IPSAEQLRRVGV                  
Sbjct: 308 VGLIQALFGLHGRVWSSCSSTGQDRNSPWLIPSAEQLRRVGVLLNGNDKAFHKSIRFEKE 367

Query: 361 ---------------------KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 408
                                +NLVAFE ATKLNPP FSNYV LMSGLITT KDVKILKE
Sbjct: 368 RPEPWFKLPTITINAFSEVVFRNLVAFEAATKLNPPYFSNYVVLMSGLITTIKDVKILKE 427

[Close]

BLAST of Carg27642 vs. NCBI nr
Match: KAG7025196.1 (putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.9 bits (1605), Expect = 2.1e-174
Identity = 337/495 (68.08%), Postives = 367/495 (74.14%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVV I QLL PN LQTALQTPTSIFKLP+SITN MPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETNWVVQINQLLDPNNLQTALQTPTSIFKLPNSITNSMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
             ++LYQMEL+KLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCY+KFLDFG+EALAW 
Sbjct: 68  FKNELYQMELYKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYNKFLDFGAEALAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQ+LAISND+ DE+RR    LY PSPFP FVEQ+LY  LIEANLMTQDELVN
Sbjct: 128 MLIDGLFLVQILAISNDEKDELRRMRQDLYLPSPFPLFVEQKLYCSLIEANLMTQDELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           D+LKLENQIPIFV+KKILPQNL NNLHIL FRFCEVVSPKKLPPHD  +F RY+G TD+Y
Sbjct: 188 DILKLENQIPIFVLKKILPQNLSNNLHILFFRFCEVVSPKKLPPHDSPQFMRYSGYTDLY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLI+                                          
Sbjct: 248 QILEQSHHLLHFLYLLILDSSLSIDRPVGMALLRGSFLVELLNALASVLQIAFLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGVK-------------NLVA 360
                                        +IPSAEQLRRVGVK             NLV 
Sbjct: 308 VGLIQSLLGLFRRVGSSSSSIGEDMNGPPLIPSAEQLRRVGVKLEGNYEDFHESIRNLVT 367

Query: 361 FEVATKLNPPCFSNYVALMSGLITTTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLE 412
           FE ATKLNPPCFSNYVALMSGLITT KDVKILKEASII+ H G+EE+VVKLFDGL++VLE
Sbjct: 368 FEGATKLNPPCFSNYVALMSGLITTIKDVKILKEASIIESHIGNEEEVVKLFDGLRSVLE 427

[Close]

BLAST of Carg27642 vs. NCBI nr
Match: XP_023535275.1 (putative UPF0481 protein At3g02645 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617.1 bits (1590), Expect = 1.2e-172
Identity = 337/521 (64.68%), Postives = 365/521 (70.06%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVVHIT+LLQPNTLQTALQTPTSIFKLP+SITN MPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETNWVVHITELLQPNTLQTALQTPTSIFKLPNSITNSMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
            T++LYQMELHKLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCYDKFLDFG+EALAW 
Sbjct: 68  FTNELYQMELHKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYDKFLDFGAEALAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQLLAISN + DE+R   P LY PSPFP FVEQ+LY  LIEAN+MTQDEL N
Sbjct: 128 MLIDGLFLVQLLAISNHEKDELRTMCPDLYLPSPFPLFVEQKLYCSLIEANVMTQDELAN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           D+L LENQIPIFV+KKILPQNL NNLH+L F+FCEVVSPKKLPPHD  +  RY G TD+Y
Sbjct: 188 DILMLENQIPIFVLKKILPQNLSNNLHLLFFKFCEVVSPKKLPPHDSPQLMRYRGYTDLY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLIM                                          
Sbjct: 248 QILEQSHHLLHFLYLLIMDTSLSIDRPVGMALFRGSFLVELLNALASVLQIAFLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGVK----------------- 360
                                        +IPSAEQLRRVGVK                 
Sbjct: 308 VGLIQSLLGLLGRVGSSSSSTGEDMNSPPLIPSAEQLRRVGVKLEGNYEDFHESISFEKE 367

Query: 361 ----------------------NLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 412
                                 NLVA+E  TKLNPPCFSNYVALMSGLITT KDVKILKE
Sbjct: 368 RREPCLKLPTIVINAFSEVVYGNLVAYEATTKLNPPCFSNYVALMSGLITTIKDVKILKE 427

[Close]

BLAST of Carg27642 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.2e-25
Identity = 114/510 (22.35%), Postives = 205/510 (40.20%), Query Frame = 0


Query: 7   ETNWVVHITQLLQPNTLQTALQTPT-SIFKLPHSITNGMPQPYFPRHIALGPYHHLTDKL 66
           ET WV+++ + L     +  L+  T SIF +P ++    P  Y P  +++GPYH L  +L
Sbjct: 18  ETRWVINVQKSLDAELEEHDLEEVTVSIFNVPKALMCSHPDSYTPHRVSIGPYHCLKPEL 77

Query: 67  YQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWTMLIDG 126
           ++ME +KL  A      +   + H +   L+  +IKIR+CY K++ F  E L W M +D 
Sbjct: 78  HEMERYKLMIARKIRNQYNSFRFHDLVEKLQSMEIKIRACYHKYIGFNGETLLWIMAVDS 137

Query: 127 LFLVQLLAI-SNDKID---------EIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQ 186
            FL++ L I S  K++         EI R    +   +  P FV ++     +E+     
Sbjct: 138 SFLIEFLKIYSFRKVETLINRVGHNEILRDI--MMIENQIPLFVLRKTLEFQLESTESAD 197

Query: 187 DELVNDVLKLENQIPIFVIK----KILPQNLGNNLHILLFRFCEVV---SPKKLPPHDLR 246
           D L++ +  L   +   VIK    +IL        HIL F +  +V     ++L   D  
Sbjct: 198 DLLLSVLTGLCKDLSPLVIKFDDDQILKAQFQECNHILDFLYQMIVPRIEEEELEEDDEE 257

Query: 247 EFKRYNGSTDVYQILEQSHH-------------LLHFLYLLI------------------ 306
                NG     + +++  H             +L F + +I                  
Sbjct: 258 NRADENGGNRAIRFMDEIKHQFKRVFASRPADLILRFPWRIISNLPGFMALKLSADYLFT 317

Query: 307 ---------------------------MVIPSAEQLRRVGV------------------- 366
                                      + IPS   L + GV                   
Sbjct: 318 RQENEATTTRQESVSILDIEKPPLVEELTIPSVSDLHKAGVRFKPTAHGNISTVTFDSNS 377

Query: 367 ------------------KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKEASI 404
                             +NLVA+E      P  F+ Y  L++G+I + +DV++L+E  +
Sbjct: 378 GQFYLPVINLDINTETVLRNLVAYEATNTSGPLVFTRYTELINGIIDSEEDVRLLREQGV 437

[Close]

BLAST of Carg27642 vs. ExPASy TrEMBL
Match: A0A6J1EC80 (putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111432741 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.9e-177
Identity = 341/517 (65.96%), Postives = 371/517 (71.76%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
            T+KLYQMELHKLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCYDKFLDFGSE LAW 
Sbjct: 68  FTNKLYQMELHKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYDKFLDFGSETLAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           ML+DGLFLVQ+LAISND+ +E RRSYP+LY+P PFPSF+EQ+LY  LIEANLMTQ+ELVN
Sbjct: 128 MLLDGLFLVQILAISNDETNERRRSYPELYFPYPFPSFIEQKLYCSLIEANLMTQNELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           DVLKLENQIPIFV+KKILPQN GNNLHIL F+FCEV+SPKKLPPHDL EFKRY  STDVY
Sbjct: 188 DVLKLENQIPIFVLKKILPQNFGNNLHILFFKFCEVISPKKLPPHDLIEFKRYKDSTDVY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLI+                                          
Sbjct: 248 QILEQSHHLLHFLYLLILDTSSHIRGPCEMADSGGYLFLDFFSVFVSVLQIPTLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGV------------------ 360
                                        +IPSAEQLRRVGV                  
Sbjct: 308 VGLIQALFGLHGRVWSSCSSTGQDRNSPWLIPSAEQLRRVGVLLNGNDKAFHKSIRFEKE 367

Query: 361 ---------------------KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 408
                                +NLVAFE ATKLNPP FSNYV LMSGLITT KDVKILKE
Sbjct: 368 RPEPWFKLPTITINAFSEVVFRNLVAFEAATKLNPPYFSNYVVLMSGLITTIKDVKILKE 427

[Close]

BLAST of Carg27642 vs. ExPASy TrEMBL
Match: A0A6J1EBZ5 (putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111432681 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 3.1e-171
Identity = 337/521 (64.68%), Postives = 366/521 (70.25%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKTPHETNWVV I QLL PN LQTALQTPTSIFKLP+SITN MPQ YFPRHIALGPYHH
Sbjct: 8   LHKTPHETNWVVQINQLLDPNNLQTALQTPTSIFKLPNSITNSMPQAYFPRHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
             ++LYQMEL+KLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCY+KFLDFG+EALAW 
Sbjct: 68  FQNELYQMELYKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYNKFLDFGAEALAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQ+LAISND+ DE+RR    LY PSPFP FVEQ+LY  LIEANLMTQDELVN
Sbjct: 128 MLIDGLFLVQILAISNDENDELRRMRQDLYLPSPFPLFVEQKLYCSLIEANLMTQDELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           D+LKLENQIP FV+KKILPQNL NNLHIL FRFCEVVSPKKLPPHD  +F RY+G TD+Y
Sbjct: 188 DILKLENQIPSFVLKKILPQNLSNNLHILFFRFCEVVSPKKLPPHDSPQFMRYSGYTDLY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLI+                                          
Sbjct: 248 QILEQSHHLLHFLYLLILDSSLSIDRPVGMALLRGSFLVELLNALASVLQIAFLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGVK----------------- 360
                                        +IPSAEQLRRVGVK                 
Sbjct: 308 VGLIQSLLGLFRRVGSSSSSIGEDMNGPPLIPSAEQLRRVGVKLEGNYEDFHESISFEKE 367

Query: 361 ----------------------NLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 412
                                 NLVAFE ATKLNPPCFSNYVALMSGLITT KDVKILKE
Sbjct: 368 RRETCLKFPTIVINAFSEVVYSNLVAFEGATKLNPPCFSNYVALMSGLITTIKDVKILKE 427

[Close]

BLAST of Carg27642 vs. ExPASy TrEMBL
Match: A0A6J1IEU4 (putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111472585 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.6e-170
Identity = 335/521 (64.30%), Postives = 366/521 (70.25%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHKT  +TNWVV I QLL PN LQTALQTPTSIFKLPHSITNGMPQ YFP HIALGPYHH
Sbjct: 8   LHKTSPKTNWVVQINQLLDPNNLQTALQTPTSIFKLPHSITNGMPQAYFPCHIALGPYHH 67

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
             ++LYQMEL+KLDNAINAI+SFKLPQLHQIA+DLEQFDIKIRSCYDKFLDFG+E LAW 
Sbjct: 68  FKNELYQMELYKLDNAINAIESFKLPQLHQIAADLEQFDIKIRSCYDKFLDFGAEVLAWI 127

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVN 180
           MLIDGLFLVQLLAISN + DE+R     LY PSPFP FVEQ+LYG LIEANLMTQDELVN
Sbjct: 128 MLIDGLFLVQLLAISNHEKDELRTMRQDLYLPSPFPLFVEQKLYGSLIEANLMTQDELVN 187

Query: 181 DVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDVY 240
           D+LKLENQIPIFV+KKILPQNL NNLHIL FRFCEVVSPKKLPPHD  +F RY+G TD+Y
Sbjct: 188 DILKLENQIPIFVLKKILPQNLSNNLHILFFRFCEVVSPKKLPPHDSPQFMRYSGYTDLY 247

Query: 241 QILEQSHHLLHFLYLLIM------------------------------------------ 300
           QILEQSHHLLHFLYLLI+                                          
Sbjct: 248 QILEQSHHLLHFLYLLILDSSLSIDRPVGMALLRGSFLVELLNALASVLQIALLQQLSEA 307

Query: 301 -----------------------------VIPSAEQLRRVGVK----------------- 360
                                        +IPSAEQLRRVGVK                 
Sbjct: 308 VGLIQSLLGLLGRVGSSSSSTGEDMNGPPLIPSAEQLRRVGVKLEGNYEDFHESISFEKE 367

Query: 361 ----------------------NLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKE 412
                                 NLVAFE ATKLNPPCFSNYVAL+SGLITTTKDVKILK+
Sbjct: 368 RREPCLKLPTIVINAFSEVVYRNLVAFEGATKLNPPCFSNYVALISGLITTTKDVKILKK 427

[Close]

BLAST of Carg27642 vs. ExPASy TrEMBL
Match: A0A1S3CB64 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498708 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 5.5e-144
Identity = 286/523 (54.68%), Postives = 337/523 (64.44%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHK  HET W++ ITQL++PN LQTALQTPTSIFKLPHSITN  PQ YFPR+IA GPYHH
Sbjct: 9   LHKNLHETQWLLQITQLIEPNNLQTALQTPTSIFKLPHSITNNNPQLYFPRYIAFGPYHH 68

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
             + LYQMELHKL NAIN+  SF+LPQL+QI   L+Q DIKIRSC+D FL+ GSEALAW 
Sbjct: 69  FRNDLYQMELHKLHNAINSTHSFQLPQLNQIVQQLKQLDIKIRSCFDNFLEIGSEALAWI 128

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQL-YYPSPFPSFVEQRLYGCLIEANLMTQDELV 180
           MLIDGLFL+QLL ISN++ DE RR  P L   PSPFPSFVEQ+LY CLIE NLMT DE+V
Sbjct: 129 MLIDGLFLIQLLPISNNEKDETRRLLPDLVLLPSPFPSFVEQKLYSCLIEGNLMTHDEIV 188

Query: 181 NDVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDV 240
            D+L LENQIP+ V+K ILP+N  N L +L F+FC+ VSP +LPPHD+ EF RY G TD+
Sbjct: 189 KDILMLENQIPLLVLKNILPENFSNKLDLLFFKFCDFVSPIQLPPHDIPEFMRYRGYTDL 248

Query: 241 YQILEQSHHLLHFLYLLI------------------------------------------ 300
            QILEQSHHLLHFLYLLI                                          
Sbjct: 249 SQILEQSHHLLHFLYLLILDKSSSIDCPVGMALCSASLVVKLLNVLASVLQIVFLQQLSE 308

Query: 301 -----------------------------MVIPSAEQLRRVGVK---------------- 360
                                        ++IPSAE+L+RVGVK                
Sbjct: 309 AAGLIQTLFGLLGRTGSSSSSTDNNINSPLLIPSAEELQRVGVKLEGNCQDFHNSIRFKQ 368

Query: 361 -----------------------NLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILK 412
                                  NL+AFE ATKLNPPCFS YVALMS LITT  DVKILK
Sbjct: 369 EPRKICLELPTITINAFSEVVFRNLMAFEAATKLNPPCFSYYVALMSWLITTANDVKILK 428

[Close]

BLAST of Carg27642 vs. ExPASy TrEMBL
Match: A0A5A7T6Y5 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00320 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 2.4e-131
Identity = 262/479 (54.70%), Postives = 301/479 (62.84%), Query Frame = 0


Query: 1   LHKTPHETNWVVHITQLLQPNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHH 60
           LHK  HET W++ ITQL++PN LQTALQTPTSIFKLPHSITN  PQ YFPR+IA GPYHH
Sbjct: 9   LHKNLHETQWLLQITQLIEPNNLQTALQTPTSIFKLPHSITNNNPQLYFPRYIAFGPYHH 68

Query: 61  LTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWT 120
             + LYQMELHKL NAIN+  SF+LPQL+QI   L+Q DIKIRSC+D FL+ GSEALAW 
Sbjct: 69  FRNDLYQMELHKLHNAINSTHSFQLPQLNQIVQQLKQLDIKIRSCFDNFLEIGSEALAWI 128

Query: 121 MLIDGLFLVQLLAISNDKIDEIRRSYPQL-YYPSPFPSFVEQRLYGCLIEANLMTQDELV 180
           MLIDGLFL+QLL ISN++ DE RR  P L   PSPFPSFVEQ+LY CLIE NLMT DE+V
Sbjct: 129 MLIDGLFLIQLLPISNNEKDETRRLLPDLVLLPSPFPSFVEQKLYSCLIEGNLMTHDEIV 188

Query: 181 NDVLKLENQIPIFVIKKILPQNLGNNLHILLFRFCEVVSPKKLPPHDLREFKRYNGSTDV 240
            D+L LENQIP+ V+K ILP+N  N L +L FRFC+ VSP +LPPHD+ EF RY G TD+
Sbjct: 189 KDILMLENQIPLLVLKNILPENFSNKLDLLFFRFCDFVSPIQLPPHDIPEFMRYRGYTDL 248

Query: 241 YQILEQSHHLLHFLYLLI------------------------------------------ 300
            QILEQSHHLLHFLYLLI                                          
Sbjct: 249 SQILEQSHHLLHFLYLLILDKSSSIDCPVGMALCSASLVVKLLNVLASVLQIVFLQQLSE 308

Query: 301 -----------------------------MVIPSAEQLRRVGVK---------------- 360
                                        ++IPSAE+L+RVGVK                
Sbjct: 309 AAGLIQTLFGLLGRTGSSSSSTDNNINSPLLIPSAEELQRVGVKLEGNCQDFHNSIRFKQ 368

Query: 361 -----------------------NLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILK 368
                                  NL+AFE ATKLNPPCFS YVALMS LITT  DVKILK
Sbjct: 369 EPRKICLELPTITINAFSEVVFRNLMAFEAATKLNPPCFSYYVALMSWLITTANDVKILK 428

[Close]

BLAST of Carg27642 vs. TAIR 10
Match: AT3G02645.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-26
Identity = 114/510 (22.35%), Postives = 205/510 (40.20%), Query Frame = 0


Query: 7   ETNWVVHITQLLQPNTLQTALQTPT-SIFKLPHSITNGMPQPYFPRHIALGPYHHLTDKL 66
           ET WV+++ + L     +  L+  T SIF +P ++    P  Y P  +++GPYH L  +L
Sbjct: 18  ETRWVINVQKSLDAELEEHDLEEVTVSIFNVPKALMCSHPDSYTPHRVSIGPYHCLKPEL 77

Query: 67  YQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWTMLIDG 126
           ++ME +KL  A      +   + H +   L+  +IKIR+CY K++ F  E L W M +D 
Sbjct: 78  HEMERYKLMIARKIRNQYNSFRFHDLVEKLQSMEIKIRACYHKYIGFNGETLLWIMAVDS 137

Query: 127 LFLVQLLAI-SNDKID---------EIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQ 186
            FL++ L I S  K++         EI R    +   +  P FV ++     +E+     
Sbjct: 138 SFLIEFLKIYSFRKVETLINRVGHNEILRDI--MMIENQIPLFVLRKTLEFQLESTESAD 197

Query: 187 DELVNDVLKLENQIPIFVIK----KILPQNLGNNLHILLFRFCEVV---SPKKLPPHDLR 246
           D L++ +  L   +   VIK    +IL        HIL F +  +V     ++L   D  
Sbjct: 198 DLLLSVLTGLCKDLSPLVIKFDDDQILKAQFQECNHILDFLYQMIVPRIEEEELEEDDEE 257

Query: 247 EFKRYNGSTDVYQILEQSHH-------------LLHFLYLLI------------------ 306
                NG     + +++  H             +L F + +I                  
Sbjct: 258 NRADENGGNRAIRFMDEIKHQFKRVFASRPADLILRFPWRIISNLPGFMALKLSADYLFT 317

Query: 307 ---------------------------MVIPSAEQLRRVGV------------------- 366
                                      + IPS   L + GV                   
Sbjct: 318 RQENEATTTRQESVSILDIEKPPLVEELTIPSVSDLHKAGVRFKPTAHGNISTVTFDSNS 377

Query: 367 ------------------KNLVAFEVATKLNPPCFSNYVALMSGLITTTKDVKILKEASI 404
                             +NLVA+E      P  F+ Y  L++G+I + +DV++L+E  +
Sbjct: 378 GQFYLPVINLDINTETVLRNLVAYEATNTSGPLVFTRYTELINGIIDSEEDVRLLREQGV 437

[Close]

BLAST of Carg27642 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-16
Identity = 101/479 (21.09%), Postives = 178/479 (37.16%), Query Frame = 0


Query: 1   LHKTPHET---NWVVHITQLLQ--PNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIAL 60
           + + P ET   +WV+ I   L+       T +     I+++PH +     + YFP+ ++L
Sbjct: 78  VEERPEETTGDSWVISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYFPQTVSL 137

Query: 61  GPYHHLTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSE 120
           GPYHH   +L  ME HK   A+N +      ++    + + + + K R+CY+  +     
Sbjct: 138 GPYHHGKKRLRPMERHKW-RALNKVLKRLKQRIEMYTNAMRELEEKARACYEGPISLSRN 197

Query: 121 ALAWTMLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQ 180
                +++DG F+++L   + +   EI        Y    P F  + L            
Sbjct: 198 EFTEMLVLDGCFVLELFRGTVEGFTEIG-------YARNDPVFAMRGL-----------M 257

Query: 181 DELVNDVLKLENQIPIFVIKKILPQNLGNN------LHILLFRFCEVVSP---KKLPPHD 240
             +  D++ LENQ+P+FV+ ++L   LG         H+ + +F + + P       P  
Sbjct: 258 HSIQRDMIMLENQLPLFVLDRLLELQLGTQNQTGIVAHVAV-KFFDPLMPTGEALTKPDQ 317

Query: 241 LREFKRYNGSTDVYQILEQSHHLLHFLYLLIMVIPS------------------------ 300
            +       S D      + H L  F   L+   P+                        
Sbjct: 318 SKLMNWLEKSLDTLGDKGELHCLDVFRRSLLQSSPTPNTRSLLKRLTRNTRVVDKRQQQL 377

Query: 301 ---AEQLRRVGVK-----------------------------------NLVAFEVATKLN 360
                +LR  GVK                                   NL+AFE     +
Sbjct: 378 VHCVTELREAGVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIES 437

Query: 361 PPCFSNYVALMSGLITTTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNL 404
               ++Y+  M  LI +++DV  L    II+   GS+ +V  LF+ L   +       +L
Sbjct: 438 SNHITSYIIFMDNLINSSEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDPKDSHL 497

[Close]

BLAST of Carg27642 vs. TAIR 10
Match: AT3G50180.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-16
Identity = 81/358 (22.63%), Postives = 139/358 (38.83%), Query Frame = 0


Query: 33  IFKLPHSITNGMPQPYFPRHIALGPYHHLTDKLYQMELHKLDNAINAIQSFKLPQLHQIA 92
           I+K+PH +     + YFP+ ++LGPYHH   +   ME HK   A+N +       +    
Sbjct: 180 IYKVPHYLHGNDKKSYFPQTVSLGPYHHGRQQTQSMECHKW-RAVNMVLKRTNQGIEVFL 239

Query: 93  SDLEQFDIKIRSCYDKFLDFGSEALAWTMLIDGLFLVQLLAISNDKIDEIRRSYPQLYYP 152
             + + + K R+CY+  +   S      +L+DG F+++LL         +   + +L Y 
Sbjct: 240 DAMIELEEKARACYEGSIVLSSNEFTEMLLLDGCFILELL-------QGVNEGFLKLGYD 299

Query: 153 SPFPSFVEQRLYGCLIEANLMTQDELVNDVLKLENQIPIFVIKKILPQNLG----NNLHI 212
              P F  +            +   +  D++ LENQ+P+FV+ ++L    G      L  
Sbjct: 300 HNDPVFAVRG-----------SMHSIQRDMIMLENQLPLFVLNRLLELQPGTQNQTGLVE 359

Query: 213 LLFRFCEVVSP------KKLPP--------------HDLREFKRYNGSTDVYQILEQSHH 272
           L+ RF   + P      +  PP              H    F R +G  +  ++ ++   
Sbjct: 360 LVVRFFIPLMPTAETLTENSPPRGVSNGELHCLDVFHRSLLFPRSSGKANYSRVADKH-- 419

Query: 273 LLHFLYLLIMVIPSAEQLRRVGVK-----------------------------------N 332
                  L  VIP+  +LR  G K                                   N
Sbjct: 420 -------LQRVIPTVTELRDAGFKFKLNKTDRFWDIKFSNGYLEIPGLLIHDGTKSLFLN 479

[Close]

BLAST of Carg27642 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 82.8 bits (203), Expect = 7.3e-16
Identity = 99/469 (21.11%), Postives = 176/469 (37.53%), Query Frame = 0


Query: 9   NWVVHITQLLQP--NTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIALGPYHHLTDKLY 68
           +WV+ IT  L+       T L     I+++P+ +     + YFP+ ++LGPYHH   +L 
Sbjct: 79  DWVISITDKLEQAHRDDDTTLWGKLCIYRVPYYLQENDNKSYFPQTVSLGPYHHGKKRLR 138

Query: 69  QMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSEALAWTMLIDGL 128
            M+ HK   A+N +       +      + + + K R+CY+  L   S      +++DG 
Sbjct: 139 SMDRHKW-RAVNRVLKRTNQGIKMYIDAMRELEEKARACYEGPLSLSSNEFIEMLVLDGC 198

Query: 129 FLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQDELVNDVLKLE 188
           F+++L   + +        + +L Y    P F           A   +   +  D++ LE
Sbjct: 199 FVLELFRGAVE-------GFTELGYARNDPVF-----------AMRGSMHSIQRDMVMLE 258

Query: 189 NQIPIFVIKKILPQNLGNN-----LHILLFRFCEVVSPKKLPPHDLREFKRYNG-----S 248
           NQ+P+FV+ ++L   LG       +  L  RF + + P   P     + K  N      S
Sbjct: 259 NQLPLFVLNRLLELQLGTRNQTGLVAQLAIRFFDPLMPTDEPLTKSGQSKLENSLARDKS 318

Query: 249 TDVYQILEQSHHLLHFLYLLIMVIPSAE---------------------------QLRRV 308
            D +  + + H L  F   L+   P  E                           +L+  
Sbjct: 319 FDPFADMGELHCLDVFRRSLLRSSPKPEPRLTRKRWSRNTRVADKRRQQLIHCVTELKEA 378

Query: 309 GVK-----------------------------------NLVAFEVATKLNPPCFSNYVAL 368
           G+K                                   NL+AFE     +    ++Y+  
Sbjct: 379 GIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSSNDITSYIIF 438

Query: 369 MSGLITTTKDVKILKEASIIKRHSGSEEKVVKLFDGLKNVLELHQHSDNLCRINNMAKIQ 404
           M  LI + +DV  L    II+   GS+ +V  LF+ L   +        L R++      
Sbjct: 439 MDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLS------ 498

[Close]

BLAST of Carg27642 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 52/208 (25.00%), Postives = 95/208 (45.67%), Query Frame = 0


Query: 1   LHKTPHET---NWVVHITQLLQ--PNTLQTALQTPTSIFKLPHSITNGMPQPYFPRHIAL 60
           + + P ET   +WV+ I   L+       T +     I+++PH +     + YFP+ ++L
Sbjct: 78  VEERPEETTGDSWVISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYFPQTVSL 137

Query: 61  GPYHHLTDKLYQMELHKLDNAINAIQSFKLPQLHQIASDLEQFDIKIRSCYDKFLDFGSE 120
           GPYHH   +L  ME HK   A+N +      ++    + + + + K R+CY+  +     
Sbjct: 138 GPYHHGKKRLRPMERHKW-RALNKVLKRLKQRIEMYTNAMRELEEKARACYEGPISLSRN 197

Query: 121 ALAWTMLIDGLFLVQLLAISNDKIDEIRRSYPQLYYPSPFPSFVEQRLYGCLIEANLMTQ 180
                +++DG F+++L   + +   EI        Y    P F  + L            
Sbjct: 198 EFTEMLVLDGCFVLELFRGTVEGFTEIG-------YARNDPVFAMRGL-----------M 257

Query: 181 DELVNDVLKLENQIPIFVIKKILPQNLG 204
             +  D++ LENQ+P+FV+ ++L   LG
Sbjct: 258 HSIQRDMIMLENQLPLFVLDRLLELQLG 266

The following BLAST results are available for this feature:

BLAST of Carg27642 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025195.1	4.3e-244	100.00	putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023535328.1	1.5e-204	74.09	putative UPF0481 protein At3g02645 [Cucurbita pepo subsp. pepo]	[more]
XP_022925441.1	5.9e-177	65.96	putative UPF0481 protein At3g02645 [Cucurbita moschata]	[more]
KAG7025196.1	2.1e-174	68.08	putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023535275.1	1.2e-172	64.68	putative UPF0481 protein At3g02645 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C897	2.2e-25	22.35	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ...	[more]

BLAST of Carg27642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EC80	2.9e-177	65.96	putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111432741...	[more]
A0A6J1EBZ5	3.1e-171	64.68	putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111432681...	[more]
A0A6J1IEU4	2.6e-170	64.30	putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111472585 P...	[more]
A0A1S3CB64	5.5e-144	54.68	putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498708 PE=4 ...	[more]
A0A5A7T6Y5	2.4e-131	54.70	Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Carg27642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02645.1	1.6e-26	22.35	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	2.5e-16	21.09	Plant protein of unknown function (DUF247)	[more]
AT3G50180.1	2.5e-16	22.63	Plant protein of unknown function (DUF247)	[more]
AT3G50120.1	7.3e-16	21.11	Plant protein of unknown function (DUF247)	[more]
AT3G50170.2	1.2e-13	25.00	Plant protein of unknown function (DUF247)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 271..395 e-value: 3.2E-22 score: 79.3 coord: 33..262 e-value: 1.3E-34 score: 120.2
IPR004158	Protein of unknown function DUF247, plant	PANTHER	PTHR31549	PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED	coord: 5..260
IPR004158	Protein of unknown function DUF247, plant	PANTHER	PTHR31549	PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED	coord: 272..405
None	No IPR available	PANTHER	PTHR31549:SF177	BNACNNG05850D PROTEIN	coord: 5..260
None	No IPR available	PANTHER	PTHR31549:SF177	BNACNNG05850D PROTEIN	coord: 272..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27642-RA	Carg27642-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane