Carg27637 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27637
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Jacalin-related lectin 19-like
Location	Carg_Chr01: 7790490 .. 7795696 (+)
RNA-Seq Expression	Carg27637
Synteny	Carg27637

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTTGTATGTACCTATATGTGTAGATCTATGGTGTTTGAGTAATATAGGATAAAATCCGAGATCTGACAGTGACGAAGGAGGATTCAAACGTACTGTAATTGGGAATTCTTACTGTGAGTGTACTAGAGATCTTTGGCTGGTTATTCCTTTCATATTCTATTTGTCGTTCGTCCGGGGTTGCTCAATTCTTTCCCGCGCCATGAAAGTTTGACCTTTCTCATTCTCTCTTCCTTGCAGGTGGTCTTCTGGAGGATGGCAGGAGTTTGTGGAATTGTTTGGCGTGCCAGGGGAGTCGTGGGTGAGTGCGATCAGAAAAGGAATGAGAATTCTGGCGCCTCGCTGAAATTCTCGAGCGGTTTCTGTGACAGTTTTCTTTTTTTTTTTTTTTTTTAATTTTATTTGTGGACGTTACCACCACAATTATATTCAAAATGAATTTCATTACAAGTCGGTGCTGTTCAAATTTATCACATACGATAAAATGAGTTTAGGTTAGAATAACAAAACGAAGTACAAAATACTAGTATATAAGGATAGATTGATGCTCTGAAACGACCGCTTTGTGGTTGCGCAACTCTTGAGTGTCTTTTTCACCCTAAATGACATCCTGCAAATACTTGAAAAAGAAAGAAGAAAAAGGTGAGTATATACTCGGTAAGCAATAACTTAGTCTTGAACCTCTTTTTGGCATCTTGCTTAGCCTTGATTGTGAATACCTACTTGTTCAATGAAACTCTCTTCGGTAGGTAACTTAGTCAACATCCATGTGTAATTATCTTTAAATGGACTCATCTTATCATCTATGATTTTCTCCCACTTGGTTGAATCCTCTACCTGTACGGTCTTATAAAGAACTTTGGTTTCCCGTTAGCAATAAATAATATAATGAAGGTGAATATCTATATGGTAATCTAATAGTTCTAGATGATCTCCTTAACACTTTTACATGTGTCGTTTTCTCAACTTAGGGTTTCTTAGCAACGATTTCTAGAGTTTCTTGAGTTTTTGCTGTAACATCACTATATGAATTTTTCTGCAACTCAACCTTTAACTCTCATTTGCTTTGTAGTCTCAGAATCTTTTTTTTTTCTTTGTACATGACATTTTTCATCGAATGTCACGTCAAAATATCTTAGGTTTTTTTTTTTCTATTTTTGCTATCTCAAAATCTATACCCAAAACATGTCATAACCATACCTTATGAATTGCACTTTATAGACTTAGCATCAAACTTGTCTTTCTTCTCTAGATCAATATGTACATATGTCATGCGACCAAAAGTTCTCAAGTAAGAGTATTTGAGTTCTTTTTCAGTCCATATTTCTTTTGGCAACTTGAACCTCAAGGGTACTGACGAGTCTCCATTGATCAAGTGAACTAATGTATTCCCAACTCAGAATATCTTTGGCAGCCCAGAATGAATCATCATGCTTCTTCCTACTCATTCAAGTTTATGTTCATCCTTTCCGCAATACCATTTTGTCTTATCTTAATGGTAACTATCCTTATTAACCTGATTCCCTCCGTTGCACAGAATGCTTTGAATTCTGACTTATCACATTCTCCTCTATTGTCAAATCTCAAACATTTGATCTTCAAACCACCCTACACCCTACTAAAATATGACTTCTGTTTTAAAAAATAAATCCATAAATTCTTGTTGAATTCATCAGTAAAGTTAACGAAGAACTTAGATCTACTAAATGATGAAACTGGAGATGGTCCCCAAACATATGTATAAACCAATTCCAATCTACTTTCTTCGGTTCTCTATCAACCTTTATAAAGCTATTTTGTTTTTGTTTGTCCATAACACAATTCTCACATAGACTCATGTAAACATATTTTAGACCCTCTAAAGCTCATTTTGCAACCAACATCTTCATTCCTTTCACTCATATGTCTAAGTCTATTGTACCATAGACTTGAACAGGAAGCACTATCAGCAACGATAGCCATGTTTATACACCCTGCAGTGATATATAATGTTCTAGATTTCGTGTCACATGCTACCACTATAGTACCCTTCACAATCTTCAACGAACTCTTCCCTAACTTTGTTGTATAACCTATACTATCCATTTGACAAATAGAGATTAGATTTTTCTTGAGACCAGAAATATATCTAACATCCTTTCGGTGAGAACTACATTTCGAATCAAACTTTAGTTTCTTAGATCCTGGGAACTCCTAATCGCAGTAACAATAGTGTCCCAAGATTCAAGTGAATATAAAATCAAAATGAATGTTTTAATTTCATATTCAAAATTGATTTCCACAGTAATCATATTGAACTCATTTATATAATTTGCAACAAATTCACCTCCAAATATTTGTAAATTGAACAACCTTCGCATCAAATAATAGCTTGTTCATAACCGACGGTTTTTTTGTACATATTTGATGTCATCAACAAATTTGACGTTGTCTTTTCCATGACAAAGTTGAATGTCACATTTCTTGACAACGTCAATCAGATAATCCCTAGTGCCTACTGATCCTCAAACTTCCATTGCTCCATGGACATCGAATCTGACTTCACCTCGAACAAGGGTTCGTGAAGATCTTATTGGTACTGGTAATCTTCAATTTTCATCTTCTAGAAACCAAAATTGGATTCATCCAACTTTTTGATCCTATTCTTTGAACTTCCTACCTTCATAGTGAACCTCTCCTACCTCTATTACCACTTGTAAGGATTGCACACCTCAATTTAAACGAAGAACAATAAAAACTACAAAATGCTTGCCTTTTATTTTATATTATTATTGGATTAAAATTCCAAAATGTTTTCTTAAGAAAAGATAGAATTCATCGTAGGGAGATGAAGGATGAGAAAAGAAACAACTTTTAAAAACCACAGAATTTTTTAATTATCTTAACAGGATCCTGTTCATTACAGGGAGATCAATCATAATAACTATAACAAAATAATCCTCTTCATGATTGACGTGCATATATATAAAATAGTGTGACAGCTTGAGGTTGACCTTCTATATATATATATATATATCAAATGTTTGAAGCATCAAAAAGGCAGCAACCTTTGTTCGTTAGATTTGGTGAATTGTGATGTTGTTGCAGACGGAACACAAGCCCTCTCCAACGCTAACATTTCAAGCGAAAGGAAGTAGGAGTGGCCGTTATTGGAACGACGGAGCTGTTTTTTGTAACGTCAAAGCGCTCAAAATCTTCCATGGAGAGTGTATTCATGCCATTCAAATCAATTATGAAGACAAGGATGGGAAATCAATTTGGTCTGAAAAACATGGCGGAAATGTTGGTTTACCATCCGACCTGGTTAGCCTTACACCTCCCGCCTAACTTTTGTTGTTTTTGTTAAATATATTTAGTCCTCAATTATAGTTTACCATATATATAGTATTTGATCTTCTGTTACCCACAAATCTTAGGTAGGTATCTTTCATTGTAGGCAAATCTTACCATAGTTATCTTTCTTTGATGGCTCTTTTTCTAATTTATTTGATTATAAATAGATAATTTTGACAGAGTTGTTTTAGCCAATATTCTTAGTTTTTCATTTTAGTTTGTTGGTATAATTTTTTATAAAAAAATTACAGACGTTGGAACTCGACGAGTACCTTATTTCAGTTCACGGCTACCATGGGAGCATCTTTGATAAACATGGGAATCCAACCCACGTCATTCGGTCTCTAACTTTTGAAACCAACCAAAGAACTTTGGGTCCGTTTGGGATTGAAAAGGGTATCAAGTTTTCGTTCCCAACCACTGGACTCATCAAGATTGTTGGCTTCCATGGGAGGTGTGGTTGGTACCTCGATTCGATCGGATTCCACTTCGTTCCGATATCAATTTTAGGATAGATTTTGTATTTTGACATTGGCTCACGCATGCATTCCTTTGAAACTAAAATGTTTTTGATATATTTGGAGATTTCATTTTTTGCTCTCGATGAAATGAAATGAAAGAAGTGTGGAATTATATACTTTCTAGTTAGTTTTGAACGACTAGTTAATTAATTGATTTAGATTTATGGAATGACATCGGCCAAAGACTACGTTTTGGGTGAGGATTTTAATAGATAACAAGGACGTAATTTTGTTGTCACCTCATTCCCGTATCAAAATATTGAAAAAGTTGTTTGATTATTAATTGGTATCCGTGAACCAATGCTTGATATCTTGAAATAATTAATTATTAGTTTTAATTAATTTTTTGGATATAAAATATTTTATCTTATTCAAATTGAGATAAGATCCAATCACACGGTCGGATTTGGAGGGCTATCAAGCCAGAACTTTTGACTTTTATATGCCAAGAACATGGGAGTGGAGCCCACAAAAGACAATTTTTAATTCTTATGAAGTTATCCTATTTTTAATTTATTATAACGTGAGAATTTAAGTTCCTATAGAGGGAGAAAAATAAATTGAGAAGAAATTACTCTAAACTTGGAAAATAACTTTAAAAGTTTAAATTTTGTAAAATTAGCCTTAAAAAACTTGATCGACCTAGATTTGCCTACTGGTGGCCATTTTCTCAAATTCATGGTTTCAAACCCTCCGTGCCAACTTAGAGTAGACCTAGGACATATAGAATAGTGCCACGAATTGATTCATTGGTCCTAATTGACCTAAGGTTGCATAATATAACGGTTAGAAATAATGACTATTCTAGTCAGACCAAGAATAAAAAAATCATGGCGACAAGGACCAAGGTCACAACGGTGATAATATTCTAGACGTTATGCCTTTACAAAGTTGTCATTAAGTTGTTTAGTATGAGACAAAGAAGAGGTTGAACCATGGGAGGATGTGCCAAAGAAATTGCTTTGGAAGGATGAACAAAAAATAGAAGAACTTGAAGAAGAAGCAGGCCATGGGTAAGATTGGGTCCGGATTCGGTTCGGTAGACCTATTAACGTTGGTGGGATATCAGTGCGGCCCGTTTCGTTGGCCTTGGTTCACGTGTGGTCCAAGTCCATACACGCTAGTGACCCGCACATTTGAAGTAATCCACCACCAGATCCAATTCATGAACTCTCCTCTACTCTTGCCCCAAGGTCGATCCGTAAACCCGACCCAATCGAATTCTGGCATGCACGTGCCGTTGTTGTTACCTTAGCTTGGATTTGGCTCCACTCGGCTTCTAATCGGCTTACCGATTCTAGCATTTTTGACCTTTTCGAAGCTGATTTTGACTTTATTGAAGGTGCTTAA

mRNA sequence

ATGGTTCTTGTATGTACCTATATGTGTAGATCTATGGTGTTTGAGTGGTCTTCTGGAGGATGGCAGGAGTTTGTGGAATTGTTTGGCGTGCCAGGGGAGTCGTGGACGGAACACAAGCCCTCTCCAACGCTAACATTTCAAGCGAAAGGAAGTAGGAGTGGCCGTTATTGGAACGACGGAGCTGTTTTTTGTAACGTCAAAGCGCTCAAAATCTTCCATGGAGAGTGTATTCATGCCATTCAAATCAATTATGAAGACAAGGATGGGAAATCAATTTGGTCTGAAAAACATGGCGGAAATGTTGGTTTACCATCCGACCTGACGTTGGAACTCGACGAGTACCTTATTTCAGTTCACGGCTACCATGGGAGCATCTTTGATAAACATGGGAATCCAACCCACGTCATTCGGTCTCTAACTTTTGAAACCAACCAAAGAACTTTGGGTCCGTTTGGGATTGAAAAGGGTATCAAGTTTTCGTTCCCAACCACTGGACTCATCAAGATTGTTGGCTTCCATGGGAGTAATCCACCACCAGATCCAATTCATGAACTCTCCTCTACTCTTGCCCCAAGGTCGATCCGTAAACCCGACCCAATCGAATTCTGGCATGCACGTGCCGTTGTTGTTACCTTAGCTTGGATTTGGCTCCACTCGGCTTCTAATCGGCTTACCGATTCTAGCATTTTTGACCTTTTCGAAGCTGATTTTGACTTTATTGAAGGTGCTTAA

Coding sequence (CDS)

ATGGTTCTTGTATGTACCTATATGTGTAGATCTATGGTGTTTGAGTGGTCTTCTGGAGGATGGCAGGAGTTTGTGGAATTGTTTGGCGTGCCAGGGGAGTCGTGGACGGAACACAAGCCCTCTCCAACGCTAACATTTCAAGCGAAAGGAAGTAGGAGTGGCCGTTATTGGAACGACGGAGCTGTTTTTTGTAACGTCAAAGCGCTCAAAATCTTCCATGGAGAGTGTATTCATGCCATTCAAATCAATTATGAAGACAAGGATGGGAAATCAATTTGGTCTGAAAAACATGGCGGAAATGTTGGTTTACCATCCGACCTGACGTTGGAACTCGACGAGTACCTTATTTCAGTTCACGGCTACCATGGGAGCATCTTTGATAAACATGGGAATCCAACCCACGTCATTCGGTCTCTAACTTTTGAAACCAACCAAAGAACTTTGGGTCCGTTTGGGATTGAAAAGGGTATCAAGTTTTCGTTCCCAACCACTGGACTCATCAAGATTGTTGGCTTCCATGGGAGTAATCCACCACCAGATCCAATTCATGAACTCTCCTCTACTCTTGCCCCAAGGTCGATCCGTAAACCCGACCCAATCGAATTCTGGCATGCACGTGCCGTTGTTGTTACCTTAGCTTGGATTTGGCTCCACTCGGCTTCTAATCGGCTTACCGATTCTAGCATTTTTGACCTTTTCGAAGCTGATTTTGACTTTATTGAAGGTGCTTAA

Protein sequence

MVLVCTYMCRSMVFEWSSGGWQEFVELFGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPDPIHELSSTLAPRSIRKPDPIEFWHARAVVVTLAWIWLHSASNRLTDSSIFDLFEADFDFIEGA

Homology

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BLAST of Carg27637 vs. NCBI nr
Match: KAG7037247.1 (Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.7 bits (1345), Expect = 1.7e-144
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MVLVCTYMCRSMVFEWSSGGWQEFVELFGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDG 60
           MVLVCTYMCRSMVFEWSSGGWQEFVELFGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDG
Sbjct: 1   MVLVCTYMCRSMVFEWSSGGWQEFVELFGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDG 60

Query: 61  AVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTLELDEYLISVHG 120
           AVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTLELDEYLISVHG
Sbjct: 61  AVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTLELDEYLISVHG 120

Query: 121 YHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPD 180
           YHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPD
Sbjct: 121 YHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPD 180

Query: 181 PIHELSSTLAPRSIRKPDPIEFWHARAVVVTLAWIWLHSASNRLTDSSIFDLFEADFDFI 240
           PIHELSSTLAPRSIRKPDPIEFWHARAVVVTLAWIWLHSASNRLTDSSIFDLFEADFDFI
Sbjct: 181 PIHELSSTLAPRSIRKPDPIEFWHARAVVVTLAWIWLHSASNRLTDSSIFDLFEADFDFI 240

Query: 241 EGA 244
           EGA
Sbjct: 241 EGA 243

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BLAST of Carg27637 vs. NCBI nr
Match: KAG6607646.1 (Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.8 bits (774), Expect = 2.8e-78
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 36  TEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSE 95
           TEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSE
Sbjct: 5   TEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSE 64

Query: 96  KHGGNVGLPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEK 155
           KHGGNVGLPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEK
Sbjct: 65  KHGGNVGLPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEK 124

Query: 156 GIKFSFPTTGLIKIVGFHG 175
           GIKFSFPTTGLIKIVGFHG
Sbjct: 125 GIKFSFPTTGLIKIVGFHG 143

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BLAST of Carg27637 vs. NCBI nr
Match: XP_038898662.1 (jacalin-related lectin 19-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-42
Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 37  EHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKSIWSE 96
           E K   TL+F+AKGS  G  W+DG V+CN+K L+I F G CI AI+  YE KDG +I  +
Sbjct: 6   ERKEERTLSFKAKGSSGGNDWDDG-VYCNIKTLEIQFGGRCIDAIRFEYEGKDGNTITPK 65

Query: 97  KHGGNVGLP-SDLTLEL-DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGI 156
           KHGGN G     + L    EYLISVHGYHG+I+D+ GNPT+VIRSL+FETN+R+LGPFGI
Sbjct: 66  KHGGNEGKQIIQICLNCPSEYLISVHGYHGNIYDRIGNPTNVIRSLSFETNERSLGPFGI 125

Query: 157 EKGIKFSFPTTGLIKIVGFHG 175
           E+GIKFSFPTTGLIKIVGFHG
Sbjct: 126 EEGIKFSFPTTGLIKIVGFHG 145

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BLAST of Carg27637 vs. NCBI nr
Match: XP_031738576.1 (jacalin-related lectin 19-like [Cucumis sativus] >KGN59969.1 hypothetical protein Csa_002426 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 9.2e-42
Identity = 91/146 (62.33%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 33  ESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKS 92
           E+  E   + TL+F+ KGS  G  W+DG V+C++K L+I F G CI AI+  YEDK G S
Sbjct: 6   EAKKEEGCAKTLSFKPKGSSGGNDWDDG-VYCDIKMLEIQFGGRCIDAIRFQYEDKYGNS 65

Query: 93  IWSEKHGGNVG---LPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTL 152
           I  +KHGGN G   +   L    DEYLISVHGYHG+I+D+ GNPTHVIRSLTFETN+++L
Sbjct: 66  ITPQKHGGNEGKRIIQIGLNCP-DEYLISVHGYHGNIYDQFGNPTHVIRSLTFETNKQSL 125

Query: 153 GPFGIEKGIKFSFPTTGLIKIVGFHG 175
           GP+GIE+GIKFSFPTTGLIKIVGFHG
Sbjct: 126 GPYGIEEGIKFSFPTTGLIKIVGFHG 149

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BLAST of Carg27637 vs. NCBI nr
Match: KAA0041597.1 (jacalin-related lectin 19-like [Cucumis melo var. makuwa] >TYK19658.1 jacalin-related lectin 19-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-41
Identity = 89/137 (64.96%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 43  TLTFQAKGSRS-GRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKSIWSEKHGGN 102
           TL+F+ KGS S G  W+DG V+CN+K L+I F G CI AI+  YEDK G S+  +KHGGN
Sbjct: 16  TLSFKPKGSSSGGSDWDDG-VYCNIKTLEIQFGGRCIDAIRFQYEDKYGNSVTPQKHGGN 75

Query: 103 VGLPSDLTLEL---DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGI 162
            G    + + L   DEYLIS+HGYHG I+D+ GNPTHVIRSLTFETN+++LGP+GIE+GI
Sbjct: 76  EG-KRIIQVRLNCPDEYLISIHGYHGDIYDRFGNPTHVIRSLTFETNEQSLGPYGIEEGI 135

Query: 163 KFSFPTTGLIKIVGFHG 175
           KFSFPTTGLIKIVGFHG
Sbjct: 136 KFSFPTTGLIKIVGFHG 150

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BLAST of Carg27637 vs. ExPASy Swiss-Prot
Match: F4HQX1 (Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTL 109
           G +SG  W+DG ++  VK + I HG  I +IQI Y DK+G S+WSEK GG  G   D  +
Sbjct: 20  GGQSGHAWDDG-MYTTVKQIIIAHGSGIDSIQIEY-DKNGSSVWSEKRGGKGGKKFD-KV 79

Query: 110 ELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGL 169
           + D   EYLISV+G +GS FD  G  T  +RSLTFE+N+R  GPFG++ G  F+ P +G 
Sbjct: 80  KFDYPHEYLISVNGTYGS-FDVWG--TICVRSLTFESNRRKYGPFGVDSGTFFALPKSG- 139

Query: 170 IKIVGFHG 175
            KI+GFHG
Sbjct: 140 SKIIGFHG 140

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BLAST of Carg27637 vs. ExPASy Swiss-Prot
Match: O65187 (Myrosinase-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBP1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 0


Query: 34  SWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIW 93
           S T   PS T   QA+G   G  W+DG VF  V+ + +  G    A      +K  ++I 
Sbjct: 301 STTSTTPSTTKKLQARGGNGGASWDDG-VFDGVRKILVGQGNDGVAFVTFEYNKGSQAIL 360

Query: 94  SEKHGGNVGLPSDLTLELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGP 153
            + HG    L ++ T ELD   EY+ SV GY+  IF   G    V+ SLTF+TN+RT  P
Sbjct: 361 GDGHGKKTLLGTE-TFELDYPSEYITSVEGYYDKIF---GVEAEVVTSLTFKTNKRTSQP 420

Query: 154 FGIEKGIKFSFPTTGLIKIVGFHGSNPPPDPIHELSSTLAP 192
           FG+  G  F     G  K+VGFHG     D +H++   + P
Sbjct: 421 FGMTAGEHFELKEDG-YKVVGFHGK--AGDLVHQIGVHIVP 453

[Close]

BLAST of Carg27637 vs. ExPASy Swiss-Prot
Match: Q9SSM3 (Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 49/127 (38.58%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVG-LPSDLT 109
           G   G  W+DG ++  V+ +++ +  CI +I + Y DK+GK   SEKHGG  G   S++ 
Sbjct: 19  GGNGGTTWDDG-IYDGVREIRLVYDHCIDSISVIY-DKNGKPAKSEKHGGVGGNKTSEIK 78

Query: 110 LEL-DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLI 169
           L+  +EYL  V GY+  + +   + T VIRS+TF++N++  GP+G+E+G  F+F   G  
Sbjct: 79  LQYPEEYLTGVSGYYCPMVN---SGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSVNG-G 138

Query: 170 KIVGFHG 175
           +IVG +G
Sbjct: 139 RIVGMNG 139

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BLAST of Carg27637 vs. ExPASy Swiss-Prot
Match: Q9SAV1 (Myrosinase-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=F-ATMBP PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16
Identity = 60/167 (35.93%), Postives = 82/167 (49.10%), Query Frame = 0


Query: 28  FGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDK 87
           F     S T   PS +   QA+G   G  W+DG VF  V+ + +  G    A      +K
Sbjct: 475 FAPTTNSTTPSTPSTSKKLQARGGNGGASWDDG-VFDGVRKILVGQGNDGVAFVTFEYNK 534

Query: 88  DGKSIWSEKHGGNVGLPSDLTLELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETN 147
             ++I  ++HG    L ++ T ELD   EY+ SV GY+  IF   G    V+ SLTF+TN
Sbjct: 535 GSQAILGDRHGKQTLLGTE-TFELDYPSEYITSVEGYYDKIF---GVEAEVVTSLTFKTN 594

Query: 148 QRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPDPIHELSSTLAP 192
           +RT  PFG+  G  F     G  KIVGFHG     D +H++     P
Sbjct: 595 KRTSQPFGMTAGEHFELNEDG-YKIVGFHGK--AGDLVHQIGVHAVP 633

[Close]

BLAST of Carg27637 vs. ExPASy Swiss-Prot
Match: P82859 (Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGE-CIHAIQINYEDKDGKSIWSEKHGGNVGLPSD-L 109
           G   G  W+DG VF  ++ L ++ G+  IHAI+++Y+ KDG+ + S KHGG  G P D +
Sbjct: 170 GGHGGMEWDDG-VFPAIRELHLYVGDSVIHAIRVSYQSKDGEPLLSPKHGGEGGEPIDPI 229

Query: 110 TLELD-EYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGL 169
            LE+  E+LI + G++G +  +       +RS+TF TN+   GP+G E G  F+  +   
Sbjct: 230 KLEVSKEFLIRIAGFYGPV--EGSGSFKALRSITFYTNKAKYGPYGDEIGQAFT-SSVAP 289

Query: 170 IKIVGFHG 175
            ++VGFHG
Sbjct: 290 GRVVGFHG 293

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BLAST of Carg27637 vs. ExPASy TrEMBL
Match: A0A0A0LG45 (Jacalin-type lectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G857590 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.5e-42
Identity = 91/146 (62.33%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 33  ESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKS 92
           E+  E   + TL+F+ KGS  G  W+DG V+C++K L+I F G CI AI+  YEDK G S
Sbjct: 6   EAKKEEGCAKTLSFKPKGSSGGNDWDDG-VYCDIKMLEIQFGGRCIDAIRFQYEDKYGNS 65

Query: 93  IWSEKHGGNVG---LPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTL 152
           I  +KHGGN G   +   L    DEYLISVHGYHG+I+D+ GNPTHVIRSLTFETN+++L
Sbjct: 66  ITPQKHGGNEGKRIIQIGLNCP-DEYLISVHGYHGNIYDQFGNPTHVIRSLTFETNKQSL 125

Query: 153 GPFGIEKGIKFSFPTTGLIKIVGFHG 175
           GP+GIE+GIKFSFPTTGLIKIVGFHG
Sbjct: 126 GPYGIEEGIKFSFPTTGLIKIVGFHG 149

[Close]

BLAST of Carg27637 vs. ExPASy TrEMBL
Match: A0A5A7TIX2 (Jacalin-related lectin 19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00500 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-41
Identity = 89/137 (64.96%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 43  TLTFQAKGSRS-GRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKSIWSEKHGGN 102
           TL+F+ KGS S G  W+DG V+CN+K L+I F G CI AI+  YEDK G S+  +KHGGN
Sbjct: 16  TLSFKPKGSSSGGSDWDDG-VYCNIKTLEIQFGGRCIDAIRFQYEDKYGNSVTPQKHGGN 75

Query: 103 VGLPSDLTLEL---DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGI 162
            G    + + L   DEYLIS+HGYHG I+D+ GNPTHVIRSLTFETN+++LGP+GIE+GI
Sbjct: 76  EG-KRIIQVRLNCPDEYLISIHGYHGDIYDRFGNPTHVIRSLTFETNEQSLGPYGIEEGI 135

Query: 163 KFSFPTTGLIKIVGFHG 175
           KFSFPTTGLIKIVGFHG
Sbjct: 136 KFSFPTTGLIKIVGFHG 150

[Close]

BLAST of Carg27637 vs. ExPASy TrEMBL
Match: A0A1S3CRJ0 (jacalin-related lectin 19-like OS=Cucumis melo OX=3656 GN=LOC103503939 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 88/137 (64.23%), Postives = 107/137 (78.10%), Query Frame = 0


Query: 43  TLTFQAKGSRS-GRYWNDGAVFCNVKALKI-FHGECIHAIQINYEDKDGKSIWSEKHGGN 102
           TL+F+ KGS S G  W+DG V+CN+K L+I F G CI AI+  YEDK G S+  +KHGGN
Sbjct: 16  TLSFKPKGSSSGGSDWDDG-VYCNIKTLEIQFGGRCIDAIRFQYEDKYGNSVTPQKHGGN 75

Query: 103 VGLPSDLTLEL---DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGI 162
            G    + + L   DEYLIS+HGYHG I+D+ GNPTHVIRSLTFETN+++LGP+GIE+ I
Sbjct: 76  EG-KRIIQVRLNCPDEYLISIHGYHGDIYDRFGNPTHVIRSLTFETNEQSLGPYGIEERI 135

Query: 163 KFSFPTTGLIKIVGFHG 175
           KFSFPTTGLIKIVGFHG
Sbjct: 136 KFSFPTTGLIKIVGFHG 150

[Close]

BLAST of Carg27637 vs. ExPASy TrEMBL
Match: A0A6J1C6X3 (jacalin-related lectin 3-like OS=Momordica charantia OX=3673 GN=LOC111008958 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.7e-29
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTL 109
           G   G +W +   F  ++ L I+HG  I +IQ+ YED+ GKSIWSEKHGG  G  S++ L
Sbjct: 630 GGNGGDHWEE--TFHRIRRLVIYHGLWIDSIQMEYEDEKGKSIWSEKHGGGGGFRSEVVL 689

Query: 110 ELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKI 169
           ELDE+L+ +HGY+ ++  + G    VIRSLT +T++R+ GPFGIE G KFSFP TGL KI
Sbjct: 690 ELDEHLVLIHGYYSNL-RRWGIDATVIRSLTLKTSKRSYGPFGIEDGTKFSFPFTGL-KI 749

Query: 170 VGFHG 175
           VGFHG
Sbjct: 750 VGFHG 750

[Close]

BLAST of Carg27637 vs. ExPASy TrEMBL
Match: A0A6J1IKB1 (jacalin-related lectin 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476391 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 25  VELFGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINY 84
           ++  G+  ES  +H     L     G + G  W +   F  ++ L I+HG  I +IQ+ Y
Sbjct: 695 IQKIGLQPESQPKH-----LNLGQYGGKGGDPWEE--TFQTIRRLVIYHGLWIDSIQMEY 754

Query: 85  EDKDGKSIWSEKHGGNVGLPSDLTLELDEYLISVHGYHGSIFDKHGNPTHVIRSLTFETN 144
           ED++ K +WS+KHGG+ G  S++ LELDE+L+ V+GY+  +  K G    VIRSLT +TN
Sbjct: 755 EDENQKLMWSKKHGGDGGFRSEVVLELDEHLVLVNGYYSDL-HKWGIAATVIRSLTLKTN 814

Query: 145 QRTLGPFGIEKGIKFSFPTTGLIKIVGFHG 175
           +RT GPFGIE G KFSFP TGL KIVG HG
Sbjct: 815 KRTYGPFGIEDGTKFSFPFTGL-KIVGIHG 835

[Close]

BLAST of Carg27637 vs. TAIR 10
Match: AT1G19715.1 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTL 109
           G +SG  W+DG ++  VK + I HG  I +IQI Y DK+G S+WSEK GG  G   D  +
Sbjct: 14  GGQSGHAWDDG-MYTTVKQIIIAHGSGIDSIQIEY-DKNGSSVWSEKRGGKGGKKFD-KV 73

Query: 110 ELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGL 169
           + D   EYLISV+G +GS FD  G  T  +RSLTFE+N+R  GPFG++ G  F+ P +G 
Sbjct: 74  KFDYPHEYLISVNGTYGS-FDVWG--TICVRSLTFESNRRKYGPFGVDSGTFFALPKSG- 133

Query: 170 IKIVGFHG 175
            KI+GFHG
Sbjct: 134 SKIIGFHG 134

[Close]

BLAST of Carg27637 vs. TAIR 10
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTL 109
           G +SG  W+DG ++  VK + I HG  I +IQI Y DK+G S+WSEK GG  G   D  +
Sbjct: 20  GGQSGHAWDDG-MYTTVKQIIIAHGSGIDSIQIEY-DKNGSSVWSEKRGGKGGKKFD-KV 79

Query: 110 ELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGL 169
           + D   EYLISV+G +GS FD  G  T  +RSLTFE+N+R  GPFG++ G  F+ P +G 
Sbjct: 80  KFDYPHEYLISVNGTYGS-FDVWG--TICVRSLTFESNRRKYGPFGVDSGTFFALPKSG- 139

Query: 170 IKIVGFHG 175
            KI+GFHG
Sbjct: 140 SKIIGFHG 140

[Close]

BLAST of Carg27637 vs. TAIR 10
Match: AT1G19715.2 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-21
Identity = 58/116 (50.00%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 62  VFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVGLPSDLTLELD---EYLISV 121
           ++  VK + I HG  I +IQI Y DK+G S+WSEK GG  G   D  ++ D   EYLISV
Sbjct: 1   MYTTVKQIIIAHGSGIDSIQIEY-DKNGSSVWSEKRGGKGGKKFD-KVKFDYPHEYLISV 60

Query: 122 HGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLIKIVGFHG 175
           +G +GS FD  G  T  +RSLTFE+N+R  GPFG++ G  F+ P +G  KI+GFHG
Sbjct: 61  NGTYGS-FDVWG--TICVRSLTFESNRRKYGPFGVDSGTFFALPKSG-SKIIGFHG 110

[Close]

BLAST of Carg27637 vs. TAIR 10
Match: AT1G73040.1 (Mannose-binding lectin superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 9.9e-18
Identity = 49/127 (38.58%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 50  GSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDKDGKSIWSEKHGGNVG-LPSDLT 109
           G   G  W+DG ++  V+ +++ +  CI +I + Y DK+GK   SEKHGG  G   S++ 
Sbjct: 19  GGNGGTTWDDG-IYDGVREIRLVYDHCIDSISVIY-DKNGKPAKSEKHGGVGGNKTSEIK 78

Query: 110 LEL-DEYLISVHGYHGSIFDKHGNPTHVIRSLTFETNQRTLGPFGIEKGIKFSFPTTGLI 169
           L+  +EYL  V GY+  + +   + T VIRS+TF++N++  GP+G+E+G  F+F   G  
Sbjct: 79  LQYPEEYLTGVSGYYCPMVN---SGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSVNG-G 138

Query: 170 KIVGFHG 175
           +IVG +G
Sbjct: 139 RIVGMNG 139

[Close]

BLAST of Carg27637 vs. TAIR 10
Match: AT1G52030.2 (myrosinase-binding protein 2 )

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-17
Identity = 60/167 (35.93%), Postives = 82/167 (49.10%), Query Frame = 0


Query: 28  FGVPGESWTEHKPSPTLTFQAKGSRSGRYWNDGAVFCNVKALKIFHGECIHAIQINYEDK 87
           F     S T   PS +   QA+G   G  W+DG VF  V+ + +  G    A      +K
Sbjct: 475 FAPTTNSTTPSTPSTSKKLQARGGNGGASWDDG-VFDGVRKILVGQGNDGVAFVTFEYNK 534

Query: 88  DGKSIWSEKHGGNVGLPSDLTLELD---EYLISVHGYHGSIFDKHGNPTHVIRSLTFETN 147
             ++I  ++HG    L ++ T ELD   EY+ SV GY+  IF   G    V+ SLTF+TN
Sbjct: 535 GSQAILGDRHGKQTLLGTE-TFELDYPSEYITSVEGYYDKIF---GVEAEVVTSLTFKTN 594

Query: 148 QRTLGPFGIEKGIKFSFPTTGLIKIVGFHGSNPPPDPIHELSSTLAP 192
           +RT  PFG+  G  F     G  KIVGFHG     D +H++     P
Sbjct: 595 KRTSQPFGMTAGEHFELNEDG-YKIVGFHGK--AGDLVHQIGVHAVP 633

The following BLAST results are available for this feature:

BLAST of Carg27637 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037247.1	1.7e-144	100.00	Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607646.1	2.8e-78	100.00	Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038898662.1	1.9e-42	64.54	jacalin-related lectin 19-like [Benincasa hispida]	[more]
XP_031738576.1	9.2e-42	62.33	jacalin-related lectin 19-like [Cucumis sativus] >KGN59969.1 hypothetical protei...	[more]
KAA0041597.1	3.5e-41	64.96	jacalin-related lectin 19-like [Cucumis melo var. makuwa] >TYK19658.1 jacalin-re...	[more]

BLAST of Carg27637 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HQX1	2.0e-23	50.00	Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1	[more]
O65187	1.1e-16	36.65	Myrosinase-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBP1 PE=2 SV=1	[more]
Q9SSM3	1.4e-16	38.58	Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1	[more]
Q9SAV1	1.8e-16	35.93	Myrosinase-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=F-ATMBP PE=2 SV=...	[more]
P82859	2.4e-16	38.28	Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1	[more]

BLAST of Carg27637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG45	4.5e-42	62.33	Jacalin-type lectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A5A7TIX2	1.7e-41	64.96	Jacalin-related lectin 19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CRJ0	1.4e-40	64.23	jacalin-related lectin 19-like OS=Cucumis melo OX=3656 GN=LOC103503939 PE=3 SV=1	[more]
A0A6J1C6X3	5.7e-29	53.60	jacalin-related lectin 3-like OS=Momordica charantia OX=3673 GN=LOC111008958 PE=...	[more]
A0A6J1IKB1	2.4e-27	46.67	jacalin-related lectin 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476391 PE=3 S...	[more]

BLAST of Carg27637 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19715.1	1.4e-24	50.00	Mannose-binding lectin superfamily protein	[more]
AT1G19715.3	1.4e-24	50.00	Mannose-binding lectin superfamily protein	[more]
AT1G19715.2	1.9e-21	50.00	Mannose-binding lectin superfamily protein	[more]
AT1G73040.1	9.9e-18	38.58	Mannose-binding lectin superfamily protein	[more]
AT1G52030.2	1.3e-17	35.93	myrosinase-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001229	Jacalin-like lectin domain	SMART	SM00915	Jacalin_2	coord: 54..191 e-value: 1.7E-22 score: 90.7
IPR001229	Jacalin-like lectin domain	PFAM	PF01419	Jacalin	coord: 54..176 e-value: 2.1E-20 score: 73.0
IPR001229	Jacalin-like lectin domain	PROSITE	PS51752	JACALIN_LECTIN	coord: 43..191 score: 33.322239
IPR036404	Jacalin-like lectin domain superfamily	GENE3D	2.100.10.30		coord: 32..184 e-value: 3.6E-37 score: 130.0
IPR036404	Jacalin-like lectin domain superfamily	SUPERFAMILY	51101	Mannose-binding lectins	coord: 43..175
None	No IPR available	PANTHER	PTHR47293	JACALIN-RELATED LECTIN 3	coord: 48..183
IPR033734	Jacalin-like lectin domain, plant	CDD	cd09612	Jacalin	coord: 54..174 e-value: 2.94362E-31 score: 109.963

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27637-RA	Carg27637-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030246	carbohydrate binding