Carg27604 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27604
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nuclear transcription factor Y subunit C-9-like
Location	Carg_Chr10: 7487376 .. 7488134 (+)
RNA-Seq Expression	Carg27604
Synteny	Carg27604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

mRNA sequence

ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

Coding sequence (CDS)

ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

Protein sequence

MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMWQHGQDRTPTHQ

Homology

[Close]

BLAST of Carg27604 vs. NCBI nr
Match: XP_022961597.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022961598.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >KAG7023948.1 Nuclear transcription factor Y subunit C-9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 502.7 bits (1293), Expect = 1.9e-138
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ
Sbjct: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM
Sbjct: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRTPTHQ
Sbjct: 241 WQHGQDRTPTHQ 252

[Close]

BLAST of Carg27604 vs. NCBI nr
Match: KAG6590384.1 (Nuclear transcription factor Y subunit C-9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 250/252 (99.21%), Postives = 250/252 (99.21%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ
Sbjct: 42  MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 101

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 102 HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 161

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 162 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 221

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM
Sbjct: 222 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 281

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRT T Q
Sbjct: 282 WQHGQDRTLTDQ 293

[Close]

BLAST of Carg27604 vs. NCBI nr
Match: XP_022968781.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 243/253 (96.05%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYG-SSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY 60
           MDQ G GQSPSMGAVGSGGQIAYG SSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY
Sbjct: 1   MDQQGQGQSPSMGAVGSGGQIAYGSSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY 60

Query: 61  QHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 120
           QHIH  QQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  QHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 120

Query: 121 VLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 180
           VLFARACEMFILELTLRSW+HTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE
Sbjct: 121 VLFARACEMFILELTLRSWSHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 180

Query: 181 ALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQ 240
           ALTSIPRGSITVG PGDALPYCYMSSQHA Q GTPGMIMGKPVMDPGSYAQQSHPYMPPQ
Sbjct: 181 ALTSIPRGSITVGAPGDALPYCYMSSQHASQAGTPGMIMGKPVMDPGSYAQQSHPYMPPQ 240

Query: 241 MWQHGQDRTPTHQ 253
           MWQHGQDRTPT Q
Sbjct: 241 MWQHGQDRTPTDQ 253

[Close]

BLAST of Carg27604 vs. NCBI nr
Match: XP_023516704.1 (nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo] >XP_023516705.1 nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 243/252 (96.43%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGH QSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSG+QSTSQPSGAQLAQHQLAYQ
Sbjct: 1   MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           HIH  QQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  HIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVG PGDALPY YMSSQHA QVGTPGMIMGKPVMDPGSY QQSHPYMPPQM
Sbjct: 181 LTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQM 240

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRTPT Q
Sbjct: 241 WQHGQDRTPTDQ 251

[Close]

BLAST of Carg27604 vs. NCBI nr
Match: XP_022157074.1 (nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1 nuclear transcription factor Y subunit C-9 [Momordica charantia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.2e-122
Identity = 229/260 (88.08%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQ+AYGS++YHPSQMTVGPTSGS        QSTSQPSGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 61  AQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIH  QQQQLQQQLQ FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRG+ITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of Carg27604 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-66
Identity = 151/252 (59.92%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQ  HGQS         G + YG++ Y  + M+    + +   +QP   QLA HQ+  Q
Sbjct: 1   MDQQDHGQS---------GAMNYGTNPYQTNPMSTTAATVAGGAAQP--GQLAFHQIHQQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
                QQQQL QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  ----QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           +FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE 
Sbjct: 121 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           L SIPRG++         PY Y+ +  AP +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 LGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 241 WQHGQDRTPTHQ 253
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Carg27604 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-62
Identity = 138/231 (59.74%), Postives = 156/231 (67.53%), Query Frame = 0


Query: 12  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQHIHHHQQQQLQ 71
           M   G    + YGS+ Y  + MT  PT                   AY  IH  QQQQL 
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQIHQQQQQQLT 60

Query: 72  QQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 131
           QQLQ+FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  QQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 132 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 191
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 192 GPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMWQ 243
                  PY Y+    AP +G PGM+MG    +PG+Y    +PYM   MWQ
Sbjct: 181 A----GYPYGYLPPGTAP-IGNPGMVMG----NPGAY--PPNPYMGQPMWQ 206

[Close]

BLAST of Carg27604 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.3e-56
Identity = 121/185 (65.41%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 63  HHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLF 122
           +HH  QQ QQQLQ FW+ Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LF
Sbjct: 33  YHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 92

Query: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALT 182
           A+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDEA  
Sbjct: 93  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-- 152

Query: 183 SIPRGSITVGPPGDALPYCYMSSQHAPQVGTP----GMIMGKPVMDP-GSYAQQSHPYMP 242
           ++  G + V P    +PY Y      P +G P    GM++G+P MDP G Y Q      P
Sbjct: 153 AVLGGGMVVAPTASGVPYYY------PPMGQPAGPGGMMIGRPAMDPNGVYVQP-----P 204

[Close]

BLAST of Carg27604 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-54
Identity = 129/212 (60.85%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 37  PTSGSQSTSQPSGAQLAQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSL 96
           P SGS S     GA            +HH  QQ QQQLQ FW+ Q QEIE+V DFKNH L
Sbjct: 31  PPSGSASIVTGGGA-----------TYHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQL 90

Query: 97  PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 156
           PLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Sbjct: 91  PLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA 150

Query: 157 AITRTDIFDFLVDIVPREDLKDEA-LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTP- 216
           AITRTDIFDFLVDIVPRE++K+E    S   G   V P    +PY Y      P +G P 
Sbjct: 151 AITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYY------PPMGQPA 210

Query: 217 ---GMIMGKPVMDP-GSYAQQSHPYMPPQMWQ 243
              GM++G+P MDP G YAQ      P Q WQ
Sbjct: 211 VPGGMMIGRPAMDPSGVYAQP-----PSQAWQ 220

[Close]

BLAST of Carg27604 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-54
Identity = 135/251 (53.78%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 10  PSMGAVGSGGQI--AYGSSMYHPSQMTVGPTSGSQSTSQPSGAQ--LAQHQLAY---QHI 69
           P++G V  G Q+  AY  +   P+   V P     + S P+      AQHQL Y   Q  
Sbjct: 9   PAIGVVAGGSQVYPAYRPAATVPTAPAVIPAGSQPAPSFPANPDQLSAQHQLVYQQAQQF 68

Query: 70  HHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLF 129
           H   QQQ Q+QLQ FW+ +  +IE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 69  HQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 128

Query: 130 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALT 189
           A+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DLK+E + 
Sbjct: 129 AKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGV- 188

Query: 190 SIPRGSI-TVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMW 249
            +PR  +  +G P D+ PY Y   Q   QV   G+  G          QQ HP    Q  
Sbjct: 189 GLPRAGLPPLGVPADSYPYGYYVPQQ--QVPGAGIAYG---------GQQGHPGYLWQDP 247

Query: 250 QHGQDRTPTHQ 253
           Q  Q+  P  Q
Sbjct: 249 QEQQEEPPAEQ 247

[Close]

BLAST of Carg27604 vs. ExPASy TrEMBL
Match: A0A6J1HAL5 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN=LOC111462127 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.1e-139
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ
Sbjct: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM
Sbjct: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRTPTHQ
Sbjct: 241 WQHGQDRTPTHQ 252

[Close]

BLAST of Carg27604 vs. ExPASy TrEMBL
Match: A0A6J1HVU5 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=LOC111467915 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 243/253 (96.05%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYG-SSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY 60
           MDQ G GQSPSMGAVGSGGQIAYG SSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY
Sbjct: 1   MDQQGQGQSPSMGAVGSGGQIAYGSSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAY 60

Query: 61  QHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 120
           QHIH  QQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  QHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 120

Query: 121 VLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 180
           VLFARACEMFILELTLRSW+HTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE
Sbjct: 121 VLFARACEMFILELTLRSWSHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 180

Query: 181 ALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQ 240
           ALTSIPRGSITVG PGDALPYCYMSSQHA Q GTPGMIMGKPVMDPGSYAQQSHPYMPPQ
Sbjct: 181 ALTSIPRGSITVGAPGDALPYCYMSSQHASQAGTPGMIMGKPVMDPGSYAQQSHPYMPPQ 240

Query: 241 MWQHGQDRTPTHQ 253
           MWQHGQDRTPT Q
Sbjct: 241 MWQHGQDRTPTDQ 253

[Close]

BLAST of Carg27604 vs. ExPASy TrEMBL
Match: A0A6J1DS47 (nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC111023881 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 229/260 (88.08%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQ+AYGS++YHPSQMTVGPTSGS        QSTSQPSGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 61  AQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIH  QQQQLQQQLQ FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRG+ITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of Carg27604 vs. ExPASy TrEMBL
Match: A0A6J1HZ39 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=LOC111468953 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.8e-119
Identity = 225/260 (86.54%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ  SMGAVGSGGQIAYGS++YHP Q+TVG TSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIH  QQQQLQQQLQ FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGSITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of Carg27604 vs. ExPASy TrEMBL
Match: A0A6J1F001 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN=LOC111440924 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.8e-119
Identity = 225/260 (86.54%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ  SMGAVGSGGQIAYGS++YHP Q+TVG TSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIH  QQQQLQQQLQ FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGSITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of Carg27604 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 151/252 (59.92%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQ  HGQS         G + YG++ Y  + M+    + +   +QP   QLA HQ+  Q
Sbjct: 1   MDQQDHGQS---------GAMNYGTNPYQTNPMSTTAATVAGGAAQP--GQLAFHQIHQQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
                QQQQL QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  ----QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           +FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE 
Sbjct: 121 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           L SIPRG++         PY Y+ +  AP +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 LGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 241 WQHGQDRTPTHQ 253
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Carg27604 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 151/252 (59.92%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQ  HGQS         G + YG++ Y  + M+    + +   +QP   QLA HQ+  Q
Sbjct: 1   MDQQDHGQS---------GAMNYGTNPYQTNPMSTTAATVAGGAAQP--GQLAFHQIHQQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
                QQQQL QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  ----QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           +FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE 
Sbjct: 121 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           L SIPRG++         PY Y+ +  AP +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 LGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 241 WQHGQDRTPTHQ 253
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Carg27604 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 151/252 (59.92%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQ  HGQS         G + YG++ Y  + M+    + +   +QP   QLA HQ+  Q
Sbjct: 1   MDQQDHGQS---------GAMNYGTNPYQTNPMSTTAATVAGGAAQP--GQLAFHQIHQQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
                QQQQL QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  ----QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           +FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE 
Sbjct: 121 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           L SIPRG++         PY Y+ +  AP +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 LGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 241 WQHGQDRTPTHQ 253
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Carg27604 vs. TAIR 10
Match: AT1G08970.2 (nuclear factor Y, subunit C9 )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 151/252 (59.92%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQ  HGQS         G + YG++ Y  + M+    + +   +QP   QLA HQ+  Q
Sbjct: 1   MDQQDHGQS---------GAMNYGTNPYQTNPMSTTAATVAGGAAQP--GQLAFHQIHQQ 60

Query: 61  HIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
                QQQQL QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  ----QQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           +FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE 
Sbjct: 121 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           L SIPRG++         PY Y+ +  AP +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 LGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 241 WQHGQDRTPTHQ 253
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Carg27604 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 241.5 bits (615), Expect = 7.3e-64
Identity = 138/231 (59.74%), Postives = 156/231 (67.53%), Query Frame = 0


Query: 12  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQHIHHHQQQQLQ 71
           M   G    + YGS+ Y  + MT  PT                   AY  IH  QQQQL 
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQIHQQQQQQLT 60

Query: 72  QQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 131
           QQLQ+FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  QQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 132 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 191
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 192 GPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMWQ 243
                  PY Y+    AP +G PGM+MG    +PG+Y    +PYM   MWQ
Sbjct: 181 A----GYPYGYLPPGTAP-IGNPGMVMG----NPGAY--PPNPYMGQPMWQ 206

The following BLAST results are available for this feature:

BLAST of Carg27604 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961597.1	1.9e-138	100.00	nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_0229615...	[more]
KAG6590384.1	3.0e-136	99.21	Nuclear transcription factor Y subunit C-9, partial [Cucurbita argyrosperma subs...	[more]
XP_022968781.1	2.1e-129	96.05	nuclear transcription factor Y subunit C-9-like [Cucurbita maxima]	[more]
XP_023516704.1	3.6e-129	96.43	nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022157074.1	3.2e-122	88.08	nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1...	[more]

BLAST of Carg27604 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4B2	1.2e-66	59.92	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	1.0e-62	59.74	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	9.3e-56	65.41	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	1.0e-54	60.85	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	3.9e-54	53.78	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Carg27604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAL5	9.1e-139	100.00	nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HVU5	1.0e-129	96.05	nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DS47	1.6e-122	88.08	nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1HZ39	2.8e-119	86.54	nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F001	2.8e-119	86.54	nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg27604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08970.4	8.3e-68	59.92	nuclear factor Y, subunit C9	[more]
AT1G08970.1	8.3e-68	59.92	nuclear factor Y, subunit C9	[more]
AT1G08970.3	8.3e-68	59.92	nuclear factor Y, subunit C9	[more]
AT1G08970.2	8.3e-68	59.92	nuclear factor Y, subunit C9	[more]
AT1G54830.2	7.3e-64	59.74	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 57..173 e-value: 2.0E-47 score: 162.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 54..167
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 95..158 e-value: 2.6E-18 score: 66.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 1..247
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 1..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27604-RA	Carg27604-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity