
Carg27532 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCAAGTTTTTCTGTTTTATCTTACATGGCGTTATGCTCATCGATTTAGATATGCTCCTGAAATTATTGAAATTTCGGGAAGCTGGAGTTCGAGGTTGCCGTGAAGGTAAACATGATTGTCTTTTCACTTCGTCCGTATTTCACATAATTTTTTTTATTGCGAGCTTGATTTTCAATCCTACAAACGTTCAGGACTTCAGAAAGAGATGGGATAGGCAGTCTCGTGCATTCTATAAGCGATTATTTAGACAGACGCCGAAAGAGTTGAAAATTGAACAGAGGATGTTAGCACCAACAGCCACGTGGCTCATCGATTAACTCCAGAATAGGGACACAACGCCTCACACGGGGCGTACACGCTTCAGTACGAGACACATTATGTAGTAGTCAGTGACATTATCTCACTCATATTGGACTGATTGGTGGTGGAATTTTAATCAAAAGAACAGCGACCAGCGCACTCTCACACGCCACACTCTGGAGGTTCGCGTTTGGAAATCTGAAAGAGCATTCCAACGTGTTGCAACGTTCAGAGGACGGTCGCTATGCGCACATGGAGTTATTACTCTTATGGAGAGATGAGCATTTGTCACTATTGCCTAGAGTTGGGCAGTGAGACTGCTTAACTGAAAGTATTTCGACACATTTACGAAGGTTGAGAACATCCACATAGAGGAGGGTTTTAATAGACCCTCGCCATCTTGTCTCACAAGTGATAGGTGTCGTGAGGTCTACCAAGATTCAAATAGATTTTTTTTTTTGTAAAAGTTATATAATAAGTATTTGAACTTAGCATTATTGACTTTATTAACACTTCTTCTTTTGGTCATTGAAGAGATGTTCAAGCTAGCAGTATACTTCTTGATGATAAATTCGAAGTACGACTCGGGAGCTTGAGTGAAGTTCGTGCCCAAGATGGGGACAGCCACCAGAAACGAATGTCCAGGTTGCTTCGGTTGCCACAGTAAGTGTTCGTGCACCTTACCTGATAAATATTTCATCGACTTTTCTCACCGGGATTACTCGATTAAGGTTATCTTCAAGCTTAGGATTGCTTGTCAGCAAAATTTATCAGTTGTTGCTTTGAGGGTGTAATAATCATTTTCGCTTTAAAACGTGCAGGTCATCCGAGCCAGGTTCCTCTGGTATGTTCATATTTACATTTTGTTTCCTTTCGAGATTACAAATTTTCTTTTTCCATGGGTTGTCTGCATGTTTTGTTGAGGATCGTTGGGAGAGGAGTCTCACATCGTTAATTAAGGGGATGATCGTGGGTTTATAAGTAAGGAATACATCTCTATTTGTATAAGCCACGAGAGCTTATACTCAAAGTAGACAATATCATACCATTGTGGAGACTTGTGGTTCCTGCCCTTAAATTAGCCATGTCAGTAGAATCCTCAAATGTCTAACAAAGAAATTGTGAGCCTCGAAGGTGTGGTCAAAAGTGACTAAAGTGTCGAACAAAGAGTGTACTTTGTTCGAGGGATCCAAAGAAGGAGTCGAGTCTCGATTAAGGGGAGACTCTATGGTTTACTTTGTTCGTTGAGAGGATTGTTGAGGATCGTTGGGAGAGGAGTCCCACATCGGCTAATTAACGGGTTGATCATGAGTTTATAAGTAAGGAATAGATCTCCATTAGTATGAGGCCTTTCGGGGAAACCAAAAGCAAAGACATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCGTGGTTCCTAACATGGTATCAGAGTTATGTCATTTACTTAACCATGTCAATAGAATCCTCAAATGTCAAACAGAGGAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGTCGAACAAAGAGTATGCTTTGTTCGAGGGTTCCTAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTACGAGGGCTCCATAGGCTTCAGGGGAGGCTCTATGGTGTACTACTTTGTTCCGTCCCACATAAGCTAATTAAGAGGTTGATCATGGGTTTATAAGTAAGAAATACATCTCCATTGGTACGAGGCCTTTCGGGGAAACCAAAAGCAAAGCCATGAAAGCTGACAATATCATACCATTGTCGAGAGTCGTGGTTCCTAGCATGTTTGTCGGTATCATTTGAAGCGAGTTTATTAGGATGTGAACGTTGTGATCTGAAGTTAGCCTCATATTTGCAGGGACTCAGACATCAGTATGTTCCTATGATGTTTACTGCTTTGGGAAGGTGTTATTAGAGGTAGTGACAGGCAAGGTGGGCATCAGTGCTACTCCTGATACCCAATTGAAGGACTTTTATGATCAAACATTCCCATACATCAGTATCCACGACAAAGAATTGGTGAGCAAAATCATCGATCCGAATCTGATTGTCGATGAAGATTTCCTCGAGGAAGTGTGGGCTATGGCTGTCGTCGCGAAGTCATGTCTGAATCCAAGGCCTTCGAGACGACCCCAGATGAGATACATCCTGAAAGCTTTGGAGAATCCTTTAAAGGTCGTGAGAGAAGAAAGTTCGGGTTCGGCAAGGCTACGAGCGACTTCTTCACGAAGCTGGAATGCAGCTTTGTTCGGGAGCTGGCGACAGAGCCTATCAGATCTAACGGTTGTACCAGCTGCTGCCACAACAACGTCAAGAGCCATGGGAGGTAGCTTCAAACAGTCAGGAACTTCAGGTTCACAGGGAAGTGGCCAGAACAACAGCGGTGAAGCTTCACGGAGAAGGCATTCAAAGGAGATATTCCCCGAGCCAGCAGACGAGCAAGGCGAGAGAGGCGAGTATCATTACTAG ATGTGCAAGTTTTTCTGTTTTATCTTACATGGCGTTATGCTCATCGATTTAGATATGCTCCTGAAATTATTGAAATTTCGGGAAGCTGGAGTTCGAGGTTGCCGTGAAGGGACTCAGACATCAGTATGTTCCTATGATGTTTACTGCTTTGGGAAGGTGTTATTAGAGGTAGTGACAGGCAAGGTGGGCATCAGTGCTACTCCTGATACCCAATTGAAGGACTTTTATGATCAAACATTCCCATACATCAGTATCCACGACAAAGAATTGGTGAGCAAAATCATCGATCCGAATCTGATTGTCGATGAAGATTTCCTCGAGGAAGTGTGGGCTATGGCTGTCGTCGCGAAGTCATGTCTGAATCCAAGGCCTTCGAGACGACCCCAGATGAGATACATCCTGAAAGCTTTGGAGAATCCTTTAAAGGTCGTGAGAGAAGAAAGTTCGGGTTCGGCAAGGCTACGAGCGACTTCTTCACGAAGCTGGAATGCAGCTTTGTTCGGGAGCTGGCGACAGAGCCTATCAGATCTAACGGTTGTACCAGCTGCTGCCACAACAACGTCAAGAGCCATGGGAGGTAGCTTCAAACAGTCAGGAACTTCAGGTTCACAGGGAAGTGGCCAGAACAACAGCGGTGAAGCTTCACGGAGAAGGCATTCAAAGGAGATATTCCCCGAGCCAGCAGACGAGCAAGGCGAGAGAGGCGAGTATCATTACTAG ATGTGCAAGTTTTTCTGTTTTATCTTACATGGCGTTATGCTCATCGATTTAGATATGCTCCTGAAATTATTGAAATTTCGGGAAGCTGGAGTTCGAGGTTGCCGTGAAGGGACTCAGACATCAGTATGTTCCTATGATGTTTACTGCTTTGGGAAGGTGTTATTAGAGGTAGTGACAGGCAAGGTGGGCATCAGTGCTACTCCTGATACCCAATTGAAGGACTTTTATGATCAAACATTCCCATACATCAGTATCCACGACAAAGAATTGGTGAGCAAAATCATCGATCCGAATCTGATTGTCGATGAAGATTTCCTCGAGGAAGTGTGGGCTATGGCTGTCGTCGCGAAGTCATGTCTGAATCCAAGGCCTTCGAGACGACCCCAGATGAGATACATCCTGAAAGCTTTGGAGAATCCTTTAAAGGTCGTGAGAGAAGAAAGTTCGGGTTCGGCAAGGCTACGAGCGACTTCTTCACGAAGCTGGAATGCAGCTTTGTTCGGGAGCTGGCGACAGAGCCTATCAGATCTAACGGTTGTACCAGCTGCTGCCACAACAACGTCAAGAGCCATGGGAGGTAGCTTCAAACAGTCAGGAACTTCAGGTTCACAGGGAAGTGGCCAGAACAACAGCGGTGAAGCTTCACGGAGAAGGCATTCAAAGGAGATATTCCCCGAGCCAGCAGACGAGCAAGGCGAGAGAGGCGAGTATCATTACTAG MCKFFCFILHGVMLIDLDMLLKLLKFREAGVRGCREGTQTSVCSYDVYCFGKVLLEVVTGKVGISATPDTQLKDFYDQTFPYISIHDKELVSKIIDPNLIVDEDFLEEVWAMAVVAKSCLNPRPSRRPQMRYILKALENPLKVVREESSGSARLRATSSRSWNAALFGSWRQSLSDLTVVPAAATTTSRAMGGSFKQSGTSGSQGSGQNNSGEASRRRHSKEIFPEPADEQGERGEYHY Homology
BLAST of Carg27532 vs. NCBI nr
Match: KAG7010933.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 467.6 bits (1202), Expect = 6.4e-128 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg27532 vs. NCBI nr
Match: KAG6571121.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 397.9 bits (1021), Expect = 6.2e-107 Identity = 208/223 (93.27%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg27532 vs. NCBI nr
Match: XP_022943400.1 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Cucurbita moschata]) HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106 Identity = 207/223 (92.83%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg27532 vs. NCBI nr
Match: XP_023512639.1 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395.6 bits (1015), Expect = 3.1e-106 Identity = 206/223 (92.38%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg27532 vs. NCBI nr
Match: XP_022986461.1 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Cucurbita maxima]) HSP 1 Score: 391.3 bits (1004), Expect = 5.8e-105 Identity = 204/223 (91.48%), Postives = 209/223 (93.72%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy Swiss-Prot
Match: C0LGK4 (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.0e-60 Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy Swiss-Prot
Match: Q9FM85 (Probable serine/threonine-protein kinase PBL16 OS=Arabidopsis thaliana OX=3702 GN=PBL16 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy Swiss-Prot
Match: A9TXT1 (Chitin elicitor receptor kinase 1 OS=Physcomitrium patens OX=3218 GN=CERK1 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy Swiss-Prot
Match: C0LGI2 (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana OX=3702 GN=At1g67720 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.9e-06 Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy Swiss-Prot
Match: Q5PP29 (Probable serine/threonine-protein kinase PBL4 OS=Arabidopsis thaliana OX=3702 GN=PBL4 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.4e-06 Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy TrEMBL
Match: A0A6J1FXS1 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Cucurbita moschata OX=3662 GN=LOC111448176 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 8.7e-107 Identity = 207/223 (92.83%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy TrEMBL
Match: A0A6J1JB69 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Cucurbita maxima OX=3661 GN=LOC111484194 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.8e-105 Identity = 204/223 (91.48%), Postives = 209/223 (93.72%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy TrEMBL
Match: A0A5A7TVY5 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00660 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100 Identity = 194/218 (88.99%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy TrEMBL
Match: A0A1S3CDL1 (probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Cucumis melo OX=3656 GN=LOC103499670 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100 Identity = 194/218 (88.99%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Carg27532 vs. ExPASy TrEMBL
Match: A0A0A0LP69 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G246540 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 6.0e-100 Identity = 192/218 (88.07%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Carg27532 vs. TAIR 10
Match: AT2G16250.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-61 Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = 0
BLAST of Carg27532 vs. TAIR 10
Match: AT4G39270.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.2e-45 Identity = 100/207 (48.31%), Postives = 137/207 (66.18%), Query Frame = 0
BLAST of Carg27532 vs. TAIR 10
Match: AT5G56460.1 (Protein kinase superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-09 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 0
BLAST of Carg27532 vs. TAIR 10
Match: AT1G67720.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07 Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of Carg27532 vs. TAIR 10
Match: AT1G51805.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.7e-07 Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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