Carg27529 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27529
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr10: 10128420 .. 10128999 (+)
RNA-Seq Expression	Carg27529
Synteny	Carg27529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTTTCGTAATTATAACAAAAAACAAAGGGCAAAAGAGAAAGCAAGGGACTATAGAATCCGAGTGAAATTAAGGAAAGAGAAAGGAAATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATGAGAAGAATGTGGGATCGTGAGAGAAACAGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCCTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCTGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

mRNA sequence

ATGGTATTTTCGGCAAAAGAGAAAGCAAGGGACTATAGAATCCGAGTGAAATTAAGGAAAGAGAAAGGAAATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATGAGAAGAATGTGGGATCGTGAGAGAAACAGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCCTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCTGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

Coding sequence (CDS)

ATGGTATTTTCGGCAAAAGAGAAAGCAAGGGACTATAGAATCCGAGTGAAATTAAGGAAAGAGAAAGGAAATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATGAGAAGAATGTGGGATCGTGAGAGAAACAGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCCTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCTGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

Protein sequence

MVFSAKEKARDYRIRVKLRKEKGNVCSDGGNQSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV

Homology

[Close]

BLAST of Carg27529 vs. NCBI nr
Match: KAG7024027.1 (hypothetical protein SDJN02_15056, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVFSAKEKARDYRIRVKLRKEKGNVCSDGGNQSQRAEVYKGDEICQEKSKELLKEIGLPN 60
           MVFSAKEKARDYRIRVKLRKEKGNVCSDGGNQSQRAEVYKGDEICQEKSKELLKEIGLPN
Sbjct: 1   MVFSAKEKARDYRIRVKLRKEKGNVCSDGGNQSQRAEVYKGDEICQEKSKELLKEIGLPN 60

Query: 61  GLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGV 120
           GLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGV
Sbjct: 61  GLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGV 120

Query: 121 KTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV 180
           KTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV
Sbjct: 121 KTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV 180

Query: 181 GVKEV 186
           GVKEV
Sbjct: 181 GVKEV 185

[Close]

BLAST of Carg27529 vs. NCBI nr
Match: XP_022961599.1 (uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 uncharacterized protein LOC111780709 [Cucurbita pepo subsp. pepo] >XP_023516954.1 uncharacterized protein LOC111780710 [Cucurbita pepo subsp. pepo] >KAG7024030.1 hypothetical protein SDJN02_15059, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 32  QSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHK 91
           +++ AEVYKGDEICQEKSKELLKEIGLPNGLLPLKD+          YVWLKQRKNTTHK
Sbjct: 9   KAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHK 68

Query: 92  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 151
           FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG
Sbjct: 69  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 128

Query: 152 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 186
           LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Sbjct: 129 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 162

[Close]

BLAST of Carg27529 vs. NCBI nr
Match: KAG6590497.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 137/153 (89.54%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 32  QSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHK 91
           +++ AEVYKGDEICQEKSKELLKEIGLPNGLLPLKD+          YVWLKQRK+TTHK
Sbjct: 9   KAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKSTTHK 68

Query: 92  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 151
           FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG
Sbjct: 69  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 128

Query: 152 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE 185
           LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE
Sbjct: 129 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE 161

[Close]

BLAST of Carg27529 vs. NCBI nr
Match: XP_022968806.1 (uncharacterized protein LOC111467934 [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-67
Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 32  QSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHK 91
           +++ AEVYKGDEICQEKSKELLKEIGLPNGLLPLKD+          YVWLKQ+KNTTHK
Sbjct: 9   KAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQKKNTTHK 68

Query: 92  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 151
           FEKIGKLVSYATEVTAVVEKN+IKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG
Sbjct: 69  FEKIGKLVSYATEVTAVVEKNRIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 128

Query: 152 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 186
           LFRTFPVSAFQVEE LKQVSEKEHGVGAVGVKEV
Sbjct: 129 LFRTFPVSAFQVEEALKQVSEKEHGVGAVGVKEV 162

[Close]

BLAST of Carg27529 vs. NCBI nr
Match: XP_038893609.1 (uncharacterized protein LOC120082490 [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 126/150 (84.00%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 37  EVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIG 96
           EVY GDEICQEKSKELLKEIGLPNGLLPLKD+          +VWLKQ+K+TTHKFEKIG
Sbjct: 14  EVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLKQKKSTTHKFEKIG 73

Query: 97  KLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTF 156
           KLVSYATEVTA+VEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTF
Sbjct: 74  KLVSYATEVTAIVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGKITFQTPAGLFRTF 133

Query: 157 PVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 186
           PVSAFQVEEP+K V+E KE GVG V VKEV
Sbjct: 134 PVSAFQVEEPVKAVTEKKEQGVGTVEVKEV 163

[Close]

BLAST of Carg27529 vs. ExPASy TrEMBL
Match: A0A6J1HEI9 (uncharacterized protein LOC111462128 OS=Cucurbita moschata OX=3662 GN=LOC111462128 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.3e-69
Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 32  QSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHK 91
           +++ AEVYKGDEICQEKSKELLKEIGLPNGLLPLKD+          YVWLKQRKNTTHK
Sbjct: 9   KAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHK 68

Query: 92  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 151
           FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG
Sbjct: 69  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 128

Query: 152 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 186
           LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Sbjct: 129 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 162

[Close]

BLAST of Carg27529 vs. ExPASy TrEMBL
Match: A0A6J1HVW7 (uncharacterized protein LOC111467934 OS=Cucurbita maxima OX=3661 GN=LOC111467934 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67
Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 32  QSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHK 91
           +++ AEVYKGDEICQEKSKELLKEIGLPNGLLPLKD+          YVWLKQ+KNTTHK
Sbjct: 9   KAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQKKNTTHK 68

Query: 92  FEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 151
           FEKIGKLVSYATEVTAVVEKN+IKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG
Sbjct: 69  FEKIGKLVSYATEVTAVVEKNRIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAG 128

Query: 152 LFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 186
           LFRTFPVSAFQVEE LKQVSEKEHGVGAVGVKEV
Sbjct: 129 LFRTFPVSAFQVEEALKQVSEKEHGVGAVGVKEV 162

[Close]

BLAST of Carg27529 vs. ExPASy TrEMBL
Match: A0A5D3E4Q7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00100 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 37  EVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIG 96
           EVY GDEICQEKSKELLKEIGLPNGLLPLKD+          +VWLKQ+K+TTHKFEKIG
Sbjct: 14  EVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIG 73

Query: 97  KLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTF 156
           KLVSYATEVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTF
Sbjct: 74  KLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGKITFQTPAGLFRTF 133

Query: 157 PVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 186
           PVSAFQVEEP+K  SE KE  VG V VKE+
Sbjct: 134 PVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]

BLAST of Carg27529 vs. ExPASy TrEMBL
Match: A0A1S4E4L7 (uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 37  EVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIG 96
           EVY GDEICQEKSKELLKEIGLPNGLLPLKD+          +VWLKQ+K+TTHKFEKIG
Sbjct: 14  EVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIG 73

Query: 97  KLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTF 156
           KLVSYATEVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTF
Sbjct: 74  KLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGKITFQTPAGLFRTF 133

Query: 157 PVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 186
           PVSAFQVEEP+K  SE KE  VG V VKE+
Sbjct: 134 PVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]

BLAST of Carg27529 vs. ExPASy TrEMBL
Match: A0A0A0LTC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.9e-59
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 37  EVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTHKFEKIG 96
           EVY GDEICQEKSKELLKEIGLPNGLLPLKD+          +VWLKQ+K+TTHKFEKIG
Sbjct: 47  EVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIG 106

Query: 97  KLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTF 156
           KLVSYATEVTA VEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGL+RTF
Sbjct: 107 KLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTF 166

Query: 157 PVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 186
           PVSAFQVEEP+K VSE KE  V  V VKE+
Sbjct: 167 PVSAFQVEEPVKAVSEKKEQVVETVEVKEI 196

[Close]

BLAST of Carg27529 vs. TAIR 10
Match: AT1G56580.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 35  RAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRM-WDRERNRYVWLKQRKNTTHKFE 94
           RAE Y GDEIC+EK+KE LKE+ +PNGLLPLKD+  + +DRE    VWLKQ+K+ THKFE
Sbjct: 11  RAEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETG-IVWLKQKKSITHKFE 70

Query: 95  KIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDP-PTGKITFQTPAGL 154
            IGKLVSYATEV A VE  KIKKLTGVK KELLIWV+L+++ ++ P  +GKI F+TP GL
Sbjct: 71  AIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGKINFRTPTGL 130

Query: 155 FRTFPVSAFQVEEPLKQVSEKEHGVGAV 181
            RTFPVSAF V E  K  +EK +G   V
Sbjct: 131 SRTFPVSAFVVPEVEKPATEKNNGTTEV 157

[Close]

BLAST of Carg27529 vs. TAIR 10
Match: AT1G09310.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 95/157 (60.51%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 35  RAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRM-WDRERNRYVWLKQRKNTTHKFE 94
           +AE+Y GDEIC+EK+K  LKEI +PNGLLPLKD+  + +DRE +  VWLKQ+K+ THKF 
Sbjct: 11  KAEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRE-SGVVWLKQKKSITHKFT 70

Query: 95  KIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLF 154
           +I KLVSY TEVTA+VE  KIKKLTGVK KELLIWV++++IY ++PPT KITF+TP  L 
Sbjct: 71  EIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-KITFKTPTTLS 130

Query: 155 RTFPVSAFQV------EEPLKQVSEKEHGVGAVGVKE 185
           RTFPV+AF V      EEP K+   KE    A   KE
Sbjct: 131 RTFPVTAFIVPEEPAKEEPAKEEPAKEKSSEATEAKE 165

[Close]

BLAST of Carg27529 vs. TAIR 10
Match: AT5G46230.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30
Identity = 60/135 (44.44%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 31  NQSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTH 90
           +Q + AE+  G+  C++K+KE+L  + LP GLLPL +M  +   +   YVW+K +    H
Sbjct: 9   DQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKVQH 68

Query: 91  KFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPA 150
           +F+ IG+ VSY +EVTA++E  ++ +LTG+K+KE+LIWV++S+I+V+     +ITF  P 
Sbjct: 69  RFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFANPT 128

Query: 151 GLFRTFPVSAFQVEE 166
           GL RTFPV+AF+ +E
Sbjct: 129 GLSRTFPVTAFEEDE 143

[Close]

BLAST of Carg27529 vs. TAIR 10
Match: AT4G24130.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25
Identity = 57/136 (41.91%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 30  GNQSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTT 89
           G + + AE+  G E C ++S ELL+E+G P G++PLK++          YVW+KQ     
Sbjct: 10  GGEREGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYE 69

Query: 90  HKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTP 149
           H FE     VSY  EVTA V+K  +KK+TGVK+K++ +WV + ++ +++P + KI F+TP
Sbjct: 70  HFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTP 129

Query: 150 AGLFRTFPVSAFQVEE 166
            G+ R+FPV+ F  EE
Sbjct: 130 MGIGRSFPVTGFMDEE 145

[Close]

BLAST of Carg27529 vs. TAIR 10
Match: AT1G30020.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-21
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 31  NQSQRAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDMRRMWDRERNRYVWLKQRKNTTH 90
           ++S   E Y    +C +K+KELL  I LP GLLPLKDM  +   +   +VW++ R    H
Sbjct: 9   DESDDIESYSDQSLCLDKAKELLALIKLPTGLLPLKDMTEVGYNKTKGFVWMRMRSKIEH 68

Query: 91  KFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYV 137
            F +IG+ V Y TE+TA VE  ++++LTGVK+KEL+IWV ++DI++
Sbjct: 69  TFREIGRRVLYDTEITAFVEDRRMRRLTGVKSKELMIWVPVNDIFI 114

The following BLAST results are available for this feature:

BLAST of Carg27529 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024027.1	2.6e-97	100.00	hypothetical protein SDJN02_15056, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022961599.1	1.5e-68	90.26	uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 unchar...	[more]
KAG6590497.1	1.3e-67	89.54	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022968806.1	6.3e-67	88.31	uncharacterized protein LOC111467934 [Cucurbita maxima]	[more]
XP_038893609.1	1.2e-60	84.00	uncharacterized protein LOC120082490 [Benincasa hispida]	[more]

BLAST of Carg27529 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg27529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEI9	7.3e-69	90.26	uncharacterized protein LOC111462128 OS=Cucurbita moschata OX=3662 GN=LOC1114621...	[more]
A0A6J1HVW7	3.1e-67	88.31	uncharacterized protein LOC111467934 OS=Cucurbita maxima OX=3661 GN=LOC111467934...	[more]
A0A5D3E4Q7	2.3e-59	82.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E4L7	2.3e-59	82.67	uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=...	[more]
A0A0A0LTC9	8.9e-59	82.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1	[more]

BLAST of Carg27529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56580.1	1.4e-43	63.51	Protein of unknown function, DUF538	[more]
AT1G09310.1	1.2e-42	60.51	Protein of unknown function, DUF538	[more]
AT5G46230.1	3.9e-30	44.44	Protein of unknown function, DUF538	[more]
AT4G24130.1	4.9e-25	41.91	Protein of unknown function, DUF538	[more]
AT1G30020.1	4.3e-21	45.28	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 30..173 e-value: 5.7E-34 score: 118.8
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 35..166
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 50..162 e-value: 4.3E-29 score: 101.2
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 34..174
None	No IPR available	PANTHER	PTHR31676:SF135	PLANT/F25P12-18 PROTEIN	coord: 34..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27529-RA	Carg27529-RA	mRNA