Carg27525 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27525
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
Location	Carg_Chr10: 10073486 .. 10084821 (+)
RNA-Seq Expression	Carg27525
Synteny	Carg27525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGGCTGGGGAGCGGCGGTGAGGAGGCGAGAGATGGAACGGCCAGTGCGAAGTTCGAGTGGGTTGCTTGGTGTGTTCTGTTATAATTGGTTTTGTCCGCGTTGCGAGGGATTCTTATTTTTCTATAAGCTGATAGGCAGACGCGTTGTTTGGATATAGTTGAAGATTCGGAGTGTATCTTTTAAGGGGAGGCGGAGGCAACAAATGATACAGACGCCATAGACCTGCTATTCAAGAGTGAGAAGGCCGCGGTCAGGAGACCGGCGGGGGGGATGGAGCGAGTAGCTTGTGACGTATGGTATTGTATGTTAGTAATTTTTGCTAAATTAGCTCTCCCCTGAATGGAGATTTAATCAGCATGGATTTATATATGGTGTGTGGTGTGAGTTTCCGCATCTGAGTATTGCTTGATGTCTTAAGCTCTCCGTTGTTACGTTGCATGCATGCGTTTATTTATGTTGAATGTTGTGATTCGTTTTCGGGTGGCTGCGATGGATGAATTCCCCTATGGAGCGCGAACTTCGTGTCTTTGGGTGCTGGATGAGCCGTCCGTTGAGGTCGGCGTGCACTGTTTGCATGAATATTAGGATCGTCTGAGAAAGCAGAAGCTTGGCATTTTGCACACTCCGTAGTTATTCTAGTGCATTTCTAAGGATAGCTTAGGGGGTCTTACCATTCAGGGGCGATATGTTCGCTTTGCAGAACTTACGTTTCCCTAAGAATTAGCTGATTAATGGCACAAGGTACTTCAGGAGTGTGTCACTAATTGCTAGTGCTGGAGAACGGTACTCTATGCTTTCGTGGGAGACAAGGTCCCGATCAGTCCTTACTGCTCTTAGCCATTTCACATGGGATATGTGTCACGTCGGCTACATGCACTTAGCTTGATGGTAACCGCGCGTTGGGTCGCGCTCCCATTAGGAGGCACTATGTGGGCATAGGAGTATTCAGCACACCCCTAGGCTAGGTACCATGTAGTCCTAGATAGCCATGTAGAGGTAGCACCTCATAGAGAGATACCAACCACATTAGCTTGGCATAAGGAACCTCTAGGTGACTAATGAAAGGACGATGAACCGGTGAAACCCAAGGGGCAAGCCCCAAGAGACTATGGTTAGAACCCGATGTCCTAGAACCGAATTAGGAAACCGTGAGAGTTCTGTTAAATTAAGATACGAAGAGAGCCTACAAGTAGGTGGCTTAATGAGTATAATTTTTATACTCATCCCGTTCTTCTTTATTTTTCTCAGGTGTTTGCTGGCTGCTGGTCGGGGTAGAGGAGCATTTGAGAGCTGTACAGTCACAGAGGGGGTCGTTCCGGAGCGTCAGTCCCTTTTCGGTCTTCTAGAGTCTTTTGTATTTCATTTTATATTTGCAATTTCTTTTGTAATAATTAACAAACAAAATTTCTCTCTTTTGTTTTACTTCAATAGTATTTTTATCTTTTTACTTTGCTTTTCTTTTATTTTATTTTCCTTTTGTTTGTTTTCGATTTCGTATTTTTAATCACGATTCGGTTTTTCGAAGCCTCGAAAATTGGGTCGTGACAGACTCCATCAATTTTTTTGGAACCCGAACACAACCCAAACTTGATTGGGTTAAAAAAAATGAACCCAACCCAAATCCGAGAATCAATCCAACCCAACCCAACCCAACTCTTATAATTCAGGTTTTGTGAGGTTGAATTTTCAGGTTGGTGTACACCCCTAGTATCAATAAAAGATTGTTGGATGAAGTTCCGACATCAATTAATTTAGGAAATGATCGTGTATTTATAATCAAAGAATACTATCTCTATTAACACAAGGCTTGTTGGAAAAGCCCAAAGCAAAACCATAGCCGTGAACATACATAGGTGTTCATCTATATAGATAACCTAGCCTTATTCTGAAAAGTTAAGAAAAACACTCGGCCCAATTGTTTGAGTTATCCATCCCGGCCCATTTTTTTGTCCATCCAAAAGTTCCCAAATGGTTGCATTTGATCCCCAACGAGCTTCCCAACGGCGTATCTAAATTGATTTTGGCTCCGTTTTCTTCATCAGCGGAGGAAAAAGAATCAAAATATGAACTCAATCTCCACCTCACACCTCCCATCTCACTTCAAACCAGTAGATTTCTGAAGTGTTTTCCAAATCCCCATTTCAGCAATTCAGGCTTCGCTTTAAAGGTATTCATTCTGTTCAATCTCAAATTTCAACGTTTAGGAAATTCAATGGTGTTTTGAATGATTCTCCCCTCTCTGCCATTCACAGGCGAGGAACAGTACCATGGAAAGCTCCATTGCTTTGAAGTATCTTTCCCCTTCTCCTCCGCTTGCTTCTTCTGCTAGATTATGCTTCTTCTCAAGTAAGCTGAGAGGAACAAGACCCACATCAGTTCCTTGCCATGATCTCGAATGGAGGTCGAAACGCTTCGTGTTTAAGCAAAAAATGGTGGTTAAAGCTAGTGCGAAGGTGGAGGAGACCAGTGCTAAGGAGAGTGCTTATAAGAGCGAGTGGGGGAAGGTTTCGGCTGTGTTGTTTGATATGGATGGAGTTTTATGTAATAGTGAGGACCTATCTCGAAGGGCTGGCGTCGATGTTTTTAGTGAGTTGGGTGTTGAAGTCACCCCTGAAGACTTTGTGCCATTTATGGGAACTGGTAATTGAAGATGAACTGGATTTTTTTTTTTCTTTTGTTCATCAAAGCTTACTGCGCTGATGATTTGTTGTTCTCTTTGGGTTTTTCCCTTCGAGCTTCCCCTCAAGGTTTTTAAAACGTTGTGCTAGGGAGAGGTTTCCACACCCTTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCTACACCCTTGTAAAGGATGTTTCTGTTGTGCTAGGGAGAGGTTTCCATACTCTTATAAAGGGTGTTTCGTTGGGCTAGGGAGAGGTTTCCACACCCTTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACTCTTATAAATGTTAGTTTTGTTCTGCTAGGGAGAGGTTTCCATACCCTTATAAAGGGTGTTCCGTTGTGCTAGGGAGAGGTTTCCACATCCCTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACTCTTATAAAGGGTGTTTCGTTCTGATAGGGAGAGGTTTCCACACCCTTGTAAAGGGTATTTCGTTGTGCTACGGAGAGATTTCCACACCCTTATAAAGGGTATTTTGTTGTGCTAGGGAGAGGTTTCCACACCCTGCAAAGGGTATTTCGTTGTGCTAGGGAGAGGTTTCCACACCCTTGTAAAGGGTGTTTTGTTCTGCTAGGGAGAGGTTTTCACACTCTTGTAAAGGGTGTTTCGTTATGCTAGGGAGAGGTTTCCACACTCTTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACTCTTGTAAAGGGTGTTTCGTTCTGCTAGGGAGAGATTTCCACATCCCTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACCCTTGTAAAGGGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACCCTTGTAAAGAGTGTTTCGTTGTGCTAGGGAGAGGTTTCCACACTCTTATAAAGGGTGTTTCGTTCTGATAGGGAGAGGTTTCCACCCTCTTGTAAAGGGTGTTTTGTTCTGCTAGGAAACCTGATAGGGAGAAGTTTCCACACCCTTATAGAGGTGTTTCGTTCTACTAGGGAGAGGTTTCCACACCCTTATAGAGGTGTCTCATTCTGCTAGGGAGAGGTTTCCACACCCTTATAGAGGTTTCCAAACCATTATAAAGGGTGTTTCATTCTGCTCGGAGAGATTTCCACACCCTTATAAAGGTTTCCAAACCATTATAAAGAGTGTTTCGTTCTACTATGGAGGGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCGACGAGGGAGAGGTTTCCACACCCTTCTCTAATTGATGTGGGACCCCCCAATCCAACCCCTTCGGGGCCCAACATCTTTGCTGGCACACCACCTCGTGTTCACCCCATTCGGGGCTTTGTCTTCTTGCTGTCACATCGCCCGGTGTCTGGCTCTGATACAATTTGTAATAGCCCAAAGAGGACAATATCTACTAGCGATGGGATAATGATTACTAGTAATACTTATTTTAATCGAGAGCTGAAGTATGAAAATTGCTATGCTAAGTTTGTCATTGTTATTCGATTATACGAGTAGCATATGATGTGAGGATGTAAGATTACTTAAATCCTATTGTTTTGTTATTTTGGCATGGGGAGGTTGAATCATAGCTGCCATCACCATGGCTCTGCTGTAACGCCCCAAAATTTTCTACTTAATTTAAGGTCGCTACTGTATACATATCCTAAACATTGGATGCGGAAGACTTCATTTAAATTCCATAAGTTAAAAACATCCTATTCTAGCCTAAGTCTAAGAAAATAAATACCACTATGCTATGCATGTGCCATGGTCTCGAGTTGTGTCGTTTTAAAGATGTTTTCAAAACACGTAAGTCCATGGCTGTGTTTTAGATAAAGGATATGTTTTATGGAATTTAAATGAAGTCTTCCGCATCCAATGTTTAGGATATGTATACAGTAGCGACCTTAAATTAAGTAGAAAATTTCGAGTCGTTACATCGGTAACGACCGCCTCTCTTTCAATTTTTTCTTATCCAATACATAAAATTCAACCTGAAGGCTTCTCAATCTGCATCATCTAATGAATTGCATACGATACAATGTGGTAGCTACATGATACTGATAATTAATATTAACGTTTGAATTTCCACTTCATTATACCAGGTGAAGCGAACTTCTTAGGAGGTGTTGCATCAGTGAAAGGGGTAGCAGGATTTAGTCCTGAGGCAGCAAAAAAGAGGTTTTTTGAGATATATCTAGAGAAGGTAATCAGTTTGCAACATATTCCCTTTATTTTATTGGCTAAGTATGTGTTTTTCTTGTTTAATCCTTATCGTTTCAAACGTTTTCGTTCAGTTCTTTATGTACGAACATTTTTCAATTGTACCACTTGTGTTAGTGGAGGTTAATTGTAAATTGATGCACGAAATTATACTTAGTATACTAGAAAAACTTTAGACGAGGAATATGTAACAACTCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGGGTTTTTCCTTTCGGGCTTCCCCTCAAAATTTTTAAAACGTGTCTACTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGAGACCAGCGTCCTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACGCACCAATCCACCCCCTTTGGGGCCTAGCGTTCTTGCTGGCACACCGCCTCGTGTTCACCCCCTTCGAGGTTCAGTCTTCTCGTTGACACTCACCCAGTGTCTAGCTCTGATACCATTTGTAACGGCCCAAGTCCACTGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCGCTCAAGATTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCTCCCTAACCGATGTGGAATCTCACAATCACCCCCCTTTCAAGGCCTAGCATCCTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGATCCACCAATCCACCCCCCTTTGGGGCCCAACGTTCTTGCTAGCACACTGCCTCATGTCCACCCCCTTCGGGGCTCAGTCTTCTCGCTGGCACTCACCCAGTGTCTAGCTCTGATATTGCCTTCTTTGGGTTTTCCCTTTCAGGTTTTTAAAACGCGTTAGCTAGGGAGAGGTTTCCACGCCCTTATAAAGAATGTTTTGTTCTCCTCCCCAATTCTCATAGAATAAGTCCCCGAATTCCTCCAAAATTGTAAGAAAATTCGTTCCTATTACATATCTTAATTCTTTCTCCAAATTTCAGTAACTTACTAAGTATAATGGTGTGTTAGTTTATCATAAGTCACATGTAACATCCGCCTACAGAAACACTATAATTGAAAAATGTTATACTCACAAGGGACTAATTTGAAGCTTTCTGAATAATATGGATTAAATTGAAAAAATTATATTTAGCCTATTTCGTTCGTCTGAAAATTCATTAAAATCTTTGCCATATCGTTTGCTAACTTCGAACTGTAATTGATGATTTTGGCATAATAGTATGCAAAGCCCAATTCTGGAATAGGCTTTCCTGGTGCACTGGAGCTCATTACTGAGGTGTGTTCTTGTGGAATACAAGCTGCTTATACTCATTATTCTGATGATGATCATCATCATGAAACTTACTATTTGAGTTTGGCTATCATTATTAGTGTAAAAGCAAGGGCCTTAAAGTTGCTGTTGCGTCTAGTGCTGATCGTATCAAGGTTGATGCAAATTTAGCTGCTGCAGGGTTACCGTTGTCGATGTAAGTTTGATTGTATGTTACACTTAAGAGTCTCGGGGTCTAATTTAATATTTCTCAAGAATGTAACTTCTGATTACTCGTATCTAGCTGCAAAGTTAAAATAGAATGTGTAAGATCCCACATTGGTTGGGGAGGAGAACGAATCACCCTTTATAAGGATGTGGAAATCTTTCCCTAGCAGATGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGAGTATCTGTTAGTGGTGGACTTAGGCCTGTTACAAATGGTGTATCAGAGCCAAACACTGGGCAATGTGCCAAAAATGAGGCTGAGCCCCGAAGGGGGATGGACACGAGGCGGTGTGCCAGTAAGGACACTGTGCCCCAAAGAGGGGTGGATTGCAGGGTTCCCATATCGATTGGAGAATGGAACGAGTGTCAGCGAGGACGCTGGGTCCTGAAGTGGGGTGGATTGTAAGATCCCACATTGGTTGGGGAGGAGAACGAAACACCGTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACACGTTTTAAAAACCTTGAGCGGAAGCCTAAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGACTTGGGCCGTTACAGAATGGTTTCATACTCAGTAAATTAAAGTGCTATGATGATTCAATTAGATAGTTGCAATCAATTCATAGTTCGTAGGTGAAACATGGTTTAGATTTTTGGCTAGAAAGGAATTCTCGTCTCGTTAAGACCAAATATCGTTTCGAAGAAAAATTTAAAGCATAATATACGTAATGGCATTCTTCTCGAATATTAAACAGTAAATGTCTTCATAAAGAGAATAATCTGGAAACTAGCTGAAAATATTTTGGCTCATGACTTTCTCATGTTTTTTGAGTAAAATTTTCAATATAATTTTTCTCTCTGAGTTGTTTAAGATTTTTAATTATGAATTTATGCTTCTTTTATAGGTTTGATGCCATAGTATCAGCTGATGCTTTTGAGAATCTGAAACCTGCACCTGACATATTCATAGCTGCATCGAAGTTGTTAAATGTACCAACGGATGAGGTACGATGATTGGCTAACTCTCGGCCTGTGCCCTTCTCTCGTTCTTCTTTCCACGGCTCCGATGTGTAAAGCCATCAGTTTCGTTTCTTTCTTCTTTTTGGCATTAAGGACTTACTGTACATTGCTTGTAGAATGTTCGAGGCGTGCAGGATGTTCATTATGTTACTTTGTCTTATTTTCTTGTATGCTAGTGTTAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGAATTCTTTATAAGAATGTAGAAACCTCTCCTTAGCAGACGCGTTTTAAAAACCTAGAGAAGAAGATCGAAAGGGAAAACCTAAAGAGGACAATATCTGCTAGCGGTGGACGAGCTAGACACCGGGTGATCTGCCTACAAGAAGACTGTAATAACCCAGGCCCACCGCTAGTAAATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTTAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTATTCTCCTCCCTAACCAATGTGGGACATCACAATCCACCTCCTCGGCCCCCGTCCTCGCTGACACTCTTTCTTCCTCCAATCGTGTGGGACCGCCCCCAAATCCACCCCCCTTTGAGCGCAGCGTCCTTACCTGGACACTGCCTCGTGTCTAACAAATTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTTGATAATATTTGTAACAACCCAGACCCACCGCTAAGTCCGATATTGTCCTCTTTGGCTTTTCCCTTTTGGCTTCTCCCTCAAGGCTTTAAACGCGTCTGCTAGGGGAAGGTTCTTTGCACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAAAGACTGTGCCCCGAAGGGGAGTTGGATACTAGGCAGTGTGCCAGCAAGGACGTTGGGACCCGAAGGGGGGTGGATTGGGGGGCCTCACATTGATTGGAGAAGGGAACGAATGCCATCAAGGACGTTGGGCCCCGAAGGGGGTGGATTTTGAGATCCCACATCGGTTAGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGGAAACTCGAAGGGAAAAGCGCAAAGAGGACAATATCTGCTAGCGGTGGACTTGAGCCGTTATAGTTAAACTTATCCATTCGCTTATCTTTAAAAGATTGCTTTTCCGAGGAAGTCTCTTGCAGAACATCCTAATAATATGGCCTTTGCCTCGACGATAAAGTTTTCGTCTTCATTCTCTTTGTTTGTTTTATTTCTTTTGTCTATCTATTTTATTCATTTTGGTATTTGAATATGTAAATAATAAATATATAATCTTGAAATCATTTTCTACGTATCATCTGATCTAATATACGTCGTTCGATCTCTGTTTTCTGGATTCTAAATGCTATTGTGCTGTTATAACTATTTTCGATATTTTCTCAGTGCATTGTCATCGAAGACGCACTAGCTGGAGTGCAAGCTGCCCAAGCTGCAAAAATGAGGTACCGAAAGTTTTCACCTTCTCTCTCTATTAGAACATGTGATGTCCTACATTGGTTGGGGAGGAGAACAAACCATCATTTATAAGGGTGTAGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTAGGCCATTACAAATGGTATCAGAGCTAGACACTGAACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAATAAGGACACTGGGCCCCAAAGGGGGTGGATTGTGATGTCCTACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAAGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTAAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGATCTAGGCCGTTACAAATGGTATCAGAGCCAGACACTGGACGATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGGCGATGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGGTGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGTCTCGAAGGGAAGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCTTAGCAGACACGTTTTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTAGTGGATCTGGGCCGTTACAGAACAAGTCATATGATGGGTGATAAGTACGGTTTGATCTATCAACACTAGACTTCACTACTTCCTTCGTATCGTTGTCCCGTTATTGTTCGATTTACTATGAACTCTTGCAAGAAAGATTTGTTTTTTTTTGTTAAATGGTGTTTTATATTGCTTGCTTGCAGATGCATTGCTGTTAAAACTACATTATCCGACGAAACTCTAAAGACTGCCGGTCCATCGCTTATTCGAAATGATATAGGAAATATCACAATTCATGATATTCTCTCTGGTGGTTCTGATACCTCTAGTATGTAGCCATGAGAATACATTGTGATATCATTTTGTACCGCCATTAATGTTGAACCGTCGAGCTATATCTGTGCCGTGTTACATGAATTATAACAGCAATTCCTTTTTCTTTGATCAGAAGTATGTATGAGAAGAACACTTTTGAATAAATTTCTTTTTACATCATCTGATTGGCTTTGTTCTTGGATAGTGTTTGTTTGTGTAATTAAATTGGTTTCTGTCTAATAGTTTGAGTTAGTATTTGGCGCATATCATTGCAGATGAGAAGATACAGGGATCTCAATTTCTTCAAACCTCTGAACAAATTTCCCCACGAAAAGATACCTCAGGCATCGATGCTGCTGCTGCTGCTGTACAGGACTCGGAGGCCGTCAATGATGGTTTGTTGTCAATCGGAAGGTAGAGGTCAATAGAACTTTTTCATCATCTATGGTTCGTATTGAAATGCTGTATACCTCTATTTTCATTTAAAGAAACTGCCTTGAGGTAAATACACGAACACAACACGAACATGGTGACATATCGATTTCTAAACTAGTAGGATACAACCTGTTGGGGACACGTTATGCATGTATAAAAGTACAGACACCAACACGACATGAACATGGCGACATGACAATTTCTAAACAATTAGGACACAACATGTTGGGGGTATGTTATGTATATATAAAAGAACAATACTATTTATTTCGGCTATGGATCAAGTTGTGTGTGTCATGGGGCCAAAATGAAGGGAGCTGGCTATGGGTCGGGTCACATGGGTTTGGGGAAAAAGACTCATCTTGTGGGTCGGATGCAACAACATAGGTTTTGTTGTTCATTTCTTCCTCTGTGATGCCCGTGACTTCGGTTGGGATCTCTAAACTTTGGTTCAAGTTGCATAGATAATGGATCGAAAAGAATTGCACAACTTTCTCTTTGAAAGTGTAATGGCCCCGATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCTCCTTCGGGCTTCCCCTTAAGACTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGATTTGTTCTCCTCCCAACCAATGTGAGACATCACAATCCACCTCCCTTCGGGGCCAGTGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGATGTCTGA

mRNA sequence

ATGGCGCGGCTGGGGAGCGGCGGTGAGGAGGCGAGAGATGGAACGGCCAGGGAGGCGGAGGCAACAAATGATACAGACGCCATAGACCTGCTATTCAAGAGTGAGAAGGCCGCGGTCAGGAGACCGGCGGGGGGGATGGAGCGAGTAGCTTGTGACGTATGGTGTTTGCTGGCTGCTGGTCGGGGTAGAGGAGCATTTGAGAGCTGTACAGTCACAGAGGGGGTCGTTCCGGAGCTTCCCAAATGGTTGCATTTGATCCCCAACGAGCTTCCCAACGGCGTATCTAAATTGATTTTGGCTCCGTTTTCTTCATCAGCGGAGGAAAAAGAATCAAAATATGAACTCAATCTCCACCTCACACCTCCCATCTCACTTCAAACCAGTAGATTTCTGAAGTGTTTTCCAAATCCCCATTTCAGCAATTCAGGCTTCGCTTTAAAGGCGAGGAACAGTACCATGGAAAGCTCCATTGCTTTGAAGTATCTTTCCCCTTCTCCTCCGCTTGCTTCTTCTGCTAGATTATGCTTCTTCTCAAGTAAGCTGAGAGGAACAAGACCCACATCAGTTCCTTGCCATGATCTCGAATGGAGGTCGAAACGCTTCGTGTTTAAGCAAAAAATGGTGGTTAAAGCTAGTGCGAAGGTGGAGGAGACCAGTGCTAAGGAGAGTGCTTATAAGAGCGAGTGGGGGAAGGTTTCGGCTGTGTTGTTTGATATGGATGGAGTTTTATGTAATAGTGAGGACCTATCTCGAAGGGCTGGCGTCGATGTTTTTAGTGAGTTGGGTGTTGAAGTCACCCCTGAAGACTTTGTGCCATTTATGGGAACTGGTGAAGCGAACTTCTTAGGAGGTGTTGCATCAGTGAAAGGGGTAGCAGGATTTAGTCCTGAGGCAGCAAAAAAGAGGTTTTTTGAGATATATCTAGAGAAGCGTCCTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACGCACCAATCCACCCCCTTTGGGGCCTAGCGTTCTTGCTGGCACACCGCCTCGTGTTCACCCCCTTCGAGGTTCAGTCTTCTCGTTGACACTCACCCAGTGTCTAGCTCTGATACCATTTTATGCAAAGCCCAATTCTGGAATAGGCTTTCCTGGTGCACTGGAGCTCATTACTGAGTGTAAAAGCAAGGGCCTTAAAGTTGCTGTTGCGTCTAGTGCTGATCGTATCAAGGTTGATGCAAATTTAGCTGCTGCAGGGTTACCGTTGTCGATGCCTGTTACAAATGGTGTATCAGAGCCAAACACTGGGCAATGTGCCAAAAATGAGGCTGAGCCCCGAAGGGGGATGGACACGAGGCGGTGTGCCAGTAAGGACACTGTGCCCCAAAGAGGGGTGGATTGCAGGGTTCCCATATCGATTGGAGAATGGAACGAGTGTCAGCGAGGACGCTGGGTCCTGAAGTGGGGTGGATTGTTTGATGCCATAGTATCAGCTGATGCTTTTGAGAATCTGAAACCTGCACCTGACATATTCATAGCTGCATCGAAGTTGTTAAATGTACCAACGGATGAGAATGTTCGAGGCGTGCAGGATGTTCATTATGTTACTTTGTCTTATTTTCTTACGCGTTTTAAAAACCTAGAGAAGAAGATCGAAAGGGAAAACCTAAAGAGGACAATATCTGCTAGCGGTGGACGAGCTAGACACCGGCGTCCTTACCTGGACACTGCCTCGTGTCTAACAAATTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTTGATAATATTTGTAACAACCCAGACCCACCGCTAAGTCCGATATTGTCCTCTTTGGCTTTTCCCTTTTGGCTTCTCCCTCAAGGCTTTAAACGCTGCATTGTCATCGAAGACGCACTAGCTGGAGTGCAAGCTGCCCAAGCTGCAAAAATGAGGCCATTACAAATGGTATCAGAGCTAGACACTGAACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAATAAGGACACTGGGCCCCAAAGGGGGTGGATTGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGATCTAGGCCGTTACAAATGGTATCAGAGCCAGACACTGGACGATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGGCGATGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGGTGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGATGCATTGCTGTTAAAACTACATTATCCGACGAAACTCTAAAGACTGCCGGTCCATCGCTTATTCGAAATGATATAGGAAATATCACAATTCATGATATTCTCTCTGGTGGTTCTGATACCTCTAATGAGAAGATACAGGGATCTCAATTTCTTCAAACCTCTGAACAAATTTCCCCACGAAAAGATACCTCAGGCATCGATGCTGCTGCTGCTGCTGTACAGGACTCGGAGGCCGTCAATGATGGTTTGTTGTCAATCGGAAGTGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGATGTCTGA

Coding sequence (CDS)

ATGGCGCGGCTGGGGAGCGGCGGTGAGGAGGCGAGAGATGGAACGGCCAGGGAGGCGGAGGCAACAAATGATACAGACGCCATAGACCTGCTATTCAAGAGTGAGAAGGCCGCGGTCAGGAGACCGGCGGGGGGGATGGAGCGAGTAGCTTGTGACGTATGGTGTTTGCTGGCTGCTGGTCGGGGTAGAGGAGCATTTGAGAGCTGTACAGTCACAGAGGGGGTCGTTCCGGAGCTTCCCAAATGGTTGCATTTGATCCCCAACGAGCTTCCCAACGGCGTATCTAAATTGATTTTGGCTCCGTTTTCTTCATCAGCGGAGGAAAAAGAATCAAAATATGAACTCAATCTCCACCTCACACCTCCCATCTCACTTCAAACCAGTAGATTTCTGAAGTGTTTTCCAAATCCCCATTTCAGCAATTCAGGCTTCGCTTTAAAGGCGAGGAACAGTACCATGGAAAGCTCCATTGCTTTGAAGTATCTTTCCCCTTCTCCTCCGCTTGCTTCTTCTGCTAGATTATGCTTCTTCTCAAGTAAGCTGAGAGGAACAAGACCCACATCAGTTCCTTGCCATGATCTCGAATGGAGGTCGAAACGCTTCGTGTTTAAGCAAAAAATGGTGGTTAAAGCTAGTGCGAAGGTGGAGGAGACCAGTGCTAAGGAGAGTGCTTATAAGAGCGAGTGGGGGAAGGTTTCGGCTGTGTTGTTTGATATGGATGGAGTTTTATGTAATAGTGAGGACCTATCTCGAAGGGCTGGCGTCGATGTTTTTAGTGAGTTGGGTGTTGAAGTCACCCCTGAAGACTTTGTGCCATTTATGGGAACTGGTGAAGCGAACTTCTTAGGAGGTGTTGCATCAGTGAAAGGGGTAGCAGGATTTAGTCCTGAGGCAGCAAAAAAGAGGTTTTTTGAGATATATCTAGAGAAGCGTCCTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACGCACCAATCCACCCCCTTTGGGGCCTAGCGTTCTTGCTGGCACACCGCCTCGTGTTCACCCCCTTCGAGGTTCAGTCTTCTCGTTGACACTCACCCAGTGTCTAGCTCTGATACCATTTTATGCAAAGCCCAATTCTGGAATAGGCTTTCCTGGTGCACTGGAGCTCATTACTGAGTGTAAAAGCAAGGGCCTTAAAGTTGCTGTTGCGTCTAGTGCTGATCGTATCAAGGTTGATGCAAATTTAGCTGCTGCAGGGTTACCGTTGTCGATGCCTGTTACAAATGGTGTATCAGAGCCAAACACTGGGCAATGTGCCAAAAATGAGGCTGAGCCCCGAAGGGGGATGGACACGAGGCGGTGTGCCAGTAAGGACACTGTGCCCCAAAGAGGGGTGGATTGCAGGGTTCCCATATCGATTGGAGAATGGAACGAGTGTCAGCGAGGACGCTGGGTCCTGAAGTGGGGTGGATTGTTTGATGCCATAGTATCAGCTGATGCTTTTGAGAATCTGAAACCTGCACCTGACATATTCATAGCTGCATCGAAGTTGTTAAATGTACCAACGGATGAGAATGTTCGAGGCGTGCAGGATGTTCATTATGTTACTTTGTCTTATTTTCTTACGCGTTTTAAAAACCTAGAGAAGAAGATCGAAAGGGAAAACCTAAAGAGGACAATATCTGCTAGCGGTGGACGAGCTAGACACCGGCGTCCTTACCTGGACACTGCCTCGTGTCTAACAAATTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTTGATAATATTTGTAACAACCCAGACCCACCGCTAAGTCCGATATTGTCCTCTTTGGCTTTTCCCTTTTGGCTTCTCCCTCAAGGCTTTAAACGCTGCATTGTCATCGAAGACGCACTAGCTGGAGTGCAAGCTGCCCAAGCTGCAAAAATGAGGCCATTACAAATGGTATCAGAGCTAGACACTGAACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAATAAGGACACTGGGCCCCAAAGGGGGTGGATTGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGATCTAGGCCGTTACAAATGGTATCAGAGCCAGACACTGGACGATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGGCGATGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGGTGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGATGCATTGCTGTTAAAACTACATTATCCGACGAAACTCTAAAGACTGCCGGTCCATCGCTTATTCGAAATGATATAGGAAATATCACAATTCATGATATTCTCTCTGGTGGTTCTGATACCTCTAATGAGAAGATACAGGGATCTCAATTTCTTCAAACCTCTGAACAAATTTCCCCACGAAAAGATACCTCAGGCATCGATGCTGCTGCTGCTGCTGTACAGGACTCGGAGGCCGTCAATGATGGTTTGTTGTCAATCGGAAGTGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAGGCTGGCACATCGTCCGATGTCTGA

Protein sequence

MARLGSGGEEARDGTAREAEATNDTDAIDLLFKSEKAAVRRPAGGMERVACDVWCLLAAGRGRGAFESCTVTEGVVPELPKWLHLIPNELPNGVSKLILAPFSSSAEEKESKYELNLHLTPPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGPSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVPTDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLTNSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQAAQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTISTSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASEDAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGTPPRVYPPSGNSEKAGTSSDV

Homology

[Close]

BLAST of Carg27525 vs. NCBI nr
Match: KAG7024023.1 (hypothetical protein SDJN02_15052, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1725.7 bits (4468), Expect = 0.0e+00
Identity = 868/868 (100.00%), Postives = 868/868 (100.00%), Query Frame = 0


Query: 1   MARLGSGGEEARDGTAREAEATNDTDAIDLLFKSEKAAVRRPAGGMERVACDVWCLLAAG 60
           MARLGSGGEEARDGTAREAEATNDTDAIDLLFKSEKAAVRRPAGGMERVACDVWCLLAAG
Sbjct: 1   MARLGSGGEEARDGTAREAEATNDTDAIDLLFKSEKAAVRRPAGGMERVACDVWCLLAAG 60

Query: 61  RGRGAFESCTVTEGVVPELPKWLHLIPNELPNGVSKLILAPFSSSAEEKESKYELNLHLT 120
           RGRGAFESCTVTEGVVPELPKWLHLIPNELPNGVSKLILAPFSSSAEEKESKYELNLHLT
Sbjct: 61  RGRGAFESCTVTEGVVPELPKWLHLIPNELPNGVSKLILAPFSSSAEEKESKYELNLHLT 120

Query: 121 PPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSPPLASSARLCFFSSK 180
           PPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSPPLASSARLCFFSSK
Sbjct: 121 PPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSPPLASSARLCFFSSK 180

Query: 181 LRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYKSEWGKVSAVLFDMD 240
           LRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYKSEWGKVSAVLFDMD
Sbjct: 181 LRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYKSEWGKVSAVLFDMD 240

Query: 241 GVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAK 300
           GVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAK
Sbjct: 241 GVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAK 300

Query: 301 KRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGPSVLAGTPPRVHPLRGSVFSLTLTQCLA 360
           KRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGPSVLAGTPPRVHPLRGSVFSLTLTQCLA
Sbjct: 301 KRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGPSVLAGTPPRVHPLRGSVFSLTLTQCLA 360

Query: 361 LIPFYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMPVTNG 420
           LIPFYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMPVTNG
Sbjct: 361 LIPFYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMPVTNG 420

Query: 421 VSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQRGVDCRVPISIGEWNECQRGRWVLKWG 480
           VSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQRGVDCRVPISIGEWNECQRGRWVLKWG
Sbjct: 421 VSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQRGVDCRVPISIGEWNECQRGRWVLKWG 480

Query: 481 GLFDAIVSADAFENLKPAPDIFIAASKLLNVPTDENVRGVQDVHYVTLSYFLTRFKNLEK 540
           GLFDAIVSADAFENLKPAPDIFIAASKLLNVPTDENVRGVQDVHYVTLSYFLTRFKNLEK
Sbjct: 481 GLFDAIVSADAFENLKPAPDIFIAASKLLNVPTDENVRGVQDVHYVTLSYFLTRFKNLEK 540

Query: 541 KIERENLKRTISASGGRARHRRPYLDTASCLTNSGNSEKAGTSSGVWLDNICNNPDPPLS 600
           KIERENLKRTISASGGRARHRRPYLDTASCLTNSGNSEKAGTSSGVWLDNICNNPDPPLS
Sbjct: 541 KIERENLKRTISASGGRARHRRPYLDTASCLTNSGNSEKAGTSSGVWLDNICNNPDPPLS 600

Query: 601 PILSSLAFPFWLLPQGFKRCIVIEDALAGVQAAQAAKMRPLQMVSELDTERCASLLVVPR 660
           PILSSLAFPFWLLPQGFKRCIVIEDALAGVQAAQAAKMRPLQMVSELDTERCASLLVVPR
Sbjct: 601 PILSSLAFPFWLLPQGFKRCIVIEDALAGVQAAQAAKMRPLQMVSELDTERCASLLVVPR 660

Query: 661 RGVDTRRCANKDTGPQRGWIGKPERESPKRTISTSGGSRPLQMVSEPDTGRCASLLAVPR 720
           RGVDTRRCANKDTGPQRGWIGKPERESPKRTISTSGGSRPLQMVSEPDTGRCASLLAVPR
Sbjct: 661 RGVDTRRCANKDTGPQRGWIGKPERESPKRTISTSGGSRPLQMVSEPDTGRCASLLAVPR 720

Query: 721 RGVDTRRCASKDAGPRRGVVPHRLEEGKSASEDAGCIAVKTTLSDETLKTAGPSLIRNDI 780
           RGVDTRRCASKDAGPRRGVVPHRLEEGKSASEDAGCIAVKTTLSDETLKTAGPSLIRNDI
Sbjct: 721 RGVDTRRCASKDAGPRRGVVPHRLEEGKSASEDAGCIAVKTTLSDETLKTAGPSLIRNDI 780

Query: 781 GNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAAVQDSEAVNDGLLS 840
           GNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAAVQDSEAVNDGLLS
Sbjct: 781 GNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAAVQDSEAVNDGLLS 840

Query: 841 IGSVLTGTPPRVYPPSGNSEKAGTSSDV 869
           IGSVLTGTPPRVYPPSGNSEKAGTSSDV
Sbjct: 841 IGSVLTGTPPRVYPPSGNSEKAGTSSDV 868

[Close]

BLAST of Carg27525 vs. NCBI nr
Match: KAG6590494.1 (Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 611.7 bits (1576), Expect = 9.9e-171
Identity = 396/742 (53.37%), Postives = 397/742 (53.50%), Query Frame = 0


Query: 107 EEKESKYELNLHLTPPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSP 166
           EEKESKYELNLHLTPPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSP
Sbjct: 4   EEKESKYELNLHLTPPISLQTSRFLKCFPNPHFSNSGFALKARNSTMESSIALKYLSPSP 63

Query: 167 PLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYK 226
           PLASSARLCFFSSKLRGTRPTSVPC+DLEWRSKRFVFKQKMVVKASAKVEETSAKESAYK
Sbjct: 64  PLASSARLCFFSSKLRGTRPTSVPCNDLEWRSKRFVFKQKMVVKASAKVEETSAKESAYK 123

Query: 227 SEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVA 286
           SEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVA
Sbjct: 124 SEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVA 183

Query: 287 SVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGPSVLAGTPPRVHPL 346
           SVKGVAGFSPEAAKKRFFEIYLEK                                    
Sbjct: 184 SVKGVAGFSPEAAKKRFFEIYLEK------------------------------------ 243

Query: 347 RGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANL 406
                             YAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANL
Sbjct: 244 ------------------YAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANL 303

Query: 407 AAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQRGVDCRVPISIGE 466
           AAAGLPLSM                                                   
Sbjct: 304 AAAGLPLSM--------------------------------------------------- 363

Query: 467 WNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVPTDENVRGVQDVHYV 526
                           FDAIVSADAFENLKPAPDIFIAASKLLNVPTDE           
Sbjct: 364 ----------------FDAIVSADAFENLKPAPDIFIAASKLLNVPTDE----------- 403

Query: 527 TLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLTNSGNSEKAGTSSGV 586
                                                                       
Sbjct: 424 ------------------------------------------------------------ 403

Query: 587 WLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQAAQAAKMRPLQMVSE 646
                                            CIVIEDALAGVQAAQAAKMR       
Sbjct: 484 ---------------------------------CIVIEDALAGVQAAQAAKMR------- 403

Query: 647 LDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTISTSGGSRPLQMVSE 706
                                                                       
Sbjct: 544 ------------------------------------------------------------ 403

Query: 707 PDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASEDAGCIAVKTTLSDE 766
                                                            CIAVKTTLSDE
Sbjct: 604 -------------------------------------------------CIAVKTTLSDE 403

Query: 767 TLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAA 826
           TLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAA
Sbjct: 664 TLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAA 403

Query: 827 AVQDSEAVNDGLLSIGSVLTGT 849
           AVQDSEAVNDG LSIG  L GT
Sbjct: 724 AVQDSEAVNDGSLSIGR-LQGT 403

[Close]

BLAST of Carg27525 vs. NCBI nr
Match: XP_022961409.1 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3 [Cucurbita moschata])

HSP 1 Score: 510.8 bits (1314), Expect = 2.4e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. NCBI nr
Match: XP_022961408.1 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 510.8 bits (1314), Expect = 2.4e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. NCBI nr
Match: XP_022961407.1 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 510.8 bits (1314), Expect = 2.4e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. ExPASy Swiss-Prot
Match: Q8VZ10 (Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SOQ1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.7e-61
Identity = 211/643 (32.81%), Postives = 241/643 (37.48%), Query Frame = 0


Query: 157 IALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVE 216
           +ALK  SP    + S RL   SS L   R  S       +RS+  V+  K     S+   
Sbjct: 1   MALKLTSPPSVFSQSRRLS--SSSLIPIRSKST---FTGFRSRTGVYLSKTTALQSSTKL 60

Query: 217 ETSAKESA---YKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPF 276
             +A+  A      +WGKVSAVLFDMDGVLCNSEDLSRRA VDVF+E+GVEVT +DFVPF
Sbjct: 61  SVAAESPAATIATDDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPF 120

Query: 277 MGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGP 336
           MGTGEA FLGGVASVK V GF P+AAK+RFFEIYL+K                       
Sbjct: 121 MGTGEAKFLGGVASVKEVKGFDPDAAKERFFEIYLDK----------------------- 180

Query: 337 SVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVAV 396
                                          YAKP SGIGFPGALEL+TECK+KGLKVAV
Sbjct: 181 -------------------------------YAKPESGIGFPGALELVTECKNKGLKVAV 240

Query: 397 ASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQ 456
           ASSADRIKVDANL AAGL L+M                                      
Sbjct: 241 ASSADRIKVDANLKAAGLSLTM-------------------------------------- 297

Query: 457 RGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVPT 516
                                        FDAIVSADAFENLKPAPDIF+AA+K+L VPT
Sbjct: 301 -----------------------------FDAIVSADAFENLKPAPDIFLAAAKILGVPT 297

Query: 517 DENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLTN 576
            E                                                          
Sbjct: 361 SE---------------------------------------------------------- 297

Query: 577 SGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQAA 636
                                                         C+VIEDALAGVQAA
Sbjct: 421 ----------------------------------------------CVVIEDALAGVQAA 297

Query: 637 QAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTIS 696
           QAA MR                                                      
Sbjct: 481 QAANMR------------------------------------------------------ 297

Query: 697 TSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASED 756
                                                                       
Sbjct: 541 ------------------------------------------------------------ 297

Query: 757 AGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTS 797
             CIAVKTTLS+  LK AGPS+IR+DIGNI+I+DIL+GGSD++
Sbjct: 601 --CIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTGGSDST 297

[Close]

BLAST of Carg27525 vs. ExPASy TrEMBL
Match: A0A6J1HBQ3 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461989 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. ExPASy TrEMBL
Match: A0A6J1HDY1 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461989 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. ExPASy TrEMBL
Match: A0A6J1HA45 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461989 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-140
Identity = 348/696 (50.00%), Postives = 348/696 (50.00%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 353

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 353

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 353

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 353

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 353

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLK AGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKIAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 353

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SPRKDTSGID AAAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPRKDTSGID-AAAAVQDSEAVNDGSLSIGR-LQGT 353

[Close]

BLAST of Carg27525 vs. ExPASy TrEMBL
Match: A0A6J1HXU6 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467844 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.8e-138
Identity = 343/696 (49.28%), Postives = 346/696 (49.71%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           ME+SIA KYLSPSPPLASSARLCFFSSKLRG+RPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MENSIAFKYLSPSPPLASSARLCFFSSKLRGSRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRA VDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 352

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 352

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 352

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 352

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 352

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 352

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SP+KDTSGID  AAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPQKDTSGID--AAAVQDSEAVNDGSLSIGR-LQGT 352

[Close]

BLAST of Carg27525 vs. ExPASy TrEMBL
Match: A0A6J1HVI6 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467844 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.8e-138
Identity = 343/696 (49.28%), Postives = 346/696 (49.71%), Query Frame = 0


Query: 153 MESSIALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKAS 212
           ME+SIA KYLSPSPPLASSARLCFFSSKLRG+RPTSVPCHDLEWRSKRFVFKQKMVVKAS
Sbjct: 1   MENSIAFKYLSPSPPLASSARLCFFSSKLRGSRPTSVPCHDLEWRSKRFVFKQKMVVKAS 60

Query: 213 AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVP 272
           AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRA VDVFSELGVEVTPEDFVP
Sbjct: 61  AKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFSELGVEVTPEDFVP 120

Query: 273 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLG 332
           FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK                      
Sbjct: 121 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEK---------------------- 180

Query: 333 PSVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVA 392
                                           YAKPNSGIGFPGALELITECKSKGLKVA
Sbjct: 181 --------------------------------YAKPNSGIGFPGALELITECKSKGLKVA 240

Query: 393 VASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVP 452
           VASSADRIKVDANLAAAGLPLSM                                     
Sbjct: 241 VASSADRIKVDANLAAAGLPLSM------------------------------------- 300

Query: 453 QRGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVP 512
                                         FDAIVSADAFENLKPAPDIFIAASKLLNVP
Sbjct: 301 ------------------------------FDAIVSADAFENLKPAPDIFIAASKLLNVP 352

Query: 513 TDENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLT 572
           TDE                                                         
Sbjct: 361 TDE--------------------------------------------------------- 352

Query: 573 NSGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQA 632
                                                          CIVIEDALAGVQA
Sbjct: 421 -----------------------------------------------CIVIEDALAGVQA 352

Query: 633 AQAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTI 692
           AQAAKMR                                                     
Sbjct: 481 AQAAKMR----------------------------------------------------- 352

Query: 693 STSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASE 752
                                                                       
Sbjct: 541 ------------------------------------------------------------ 352

Query: 753 DAGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQI 812
              CIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSD SNEKIQGSQFLQTSEQI
Sbjct: 601 ---CIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDASNEKIQGSQFLQTSEQI 352

Query: 813 SPRKDTSGIDAAAAAVQDSEAVNDGLLSIGSVLTGT 849
           SP+KDTSGID  AAAVQDSEAVNDG LSIG  L GT
Sbjct: 661 SPQKDTSGID--AAAVQDSEAVNDGSLSIGR-LQGT 352

[Close]

BLAST of Carg27525 vs. TAIR 10
Match: AT1G56500.1 (haloacid dehalogenase-like hydrolase family protein )

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-62
Identity = 211/643 (32.81%), Postives = 241/643 (37.48%), Query Frame = 0


Query: 157 IALKYLSPSPPLASSARLCFFSSKLRGTRPTSVPCHDLEWRSKRFVFKQKMVVKASAKVE 216
           +ALK  SP    + S RL   SS L   R  S       +RS+  V+  K     S+   
Sbjct: 1   MALKLTSPPSVFSQSRRLS--SSSLIPIRSKST---FTGFRSRTGVYLSKTTALQSSTKL 60

Query: 217 ETSAKESA---YKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPF 276
             +A+  A      +WGKVSAVLFDMDGVLCNSEDLSRRA VDVF+E+GVEVT +DFVPF
Sbjct: 61  SVAAESPAATIATDDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPF 120

Query: 277 MGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKRPRWHLFPSPIDVGRTNPPPLGP 336
           MGTGEA FLGGVASVK V GF P+AAK+RFFEIYL+K                       
Sbjct: 121 MGTGEAKFLGGVASVKEVKGFDPDAAKERFFEIYLDK----------------------- 180

Query: 337 SVLAGTPPRVHPLRGSVFSLTLTQCLALIPFYAKPNSGIGFPGALELITECKSKGLKVAV 396
                                          YAKP SGIGFPGALEL+TECK+KGLKVAV
Sbjct: 181 -------------------------------YAKPESGIGFPGALELVTECKNKGLKVAV 240

Query: 397 ASSADRIKVDANLAAAGLPLSMPVTNGVSEPNTGQCAKNEAEPRRGMDTRRCASKDTVPQ 456
           ASSADRIKVDANL AAGL L+M                                      
Sbjct: 241 ASSADRIKVDANLKAAGLSLTM-------------------------------------- 297

Query: 457 RGVDCRVPISIGEWNECQRGRWVLKWGGLFDAIVSADAFENLKPAPDIFIAASKLLNVPT 516
                                        FDAIVSADAFENLKPAPDIF+AA+K+L VPT
Sbjct: 301 -----------------------------FDAIVSADAFENLKPAPDIFLAAAKILGVPT 297

Query: 517 DENVRGVQDVHYVTLSYFLTRFKNLEKKIERENLKRTISASGGRARHRRPYLDTASCLTN 576
            E                                                          
Sbjct: 361 SE---------------------------------------------------------- 297

Query: 577 SGNSEKAGTSSGVWLDNICNNPDPPLSPILSSLAFPFWLLPQGFKRCIVIEDALAGVQAA 636
                                                         C+VIEDALAGVQAA
Sbjct: 421 ----------------------------------------------CVVIEDALAGVQAA 297

Query: 637 QAAKMRPLQMVSELDTERCASLLVVPRRGVDTRRCANKDTGPQRGWIGKPERESPKRTIS 696
           QAA MR                                                      
Sbjct: 481 QAANMR------------------------------------------------------ 297

Query: 697 TSGGSRPLQMVSEPDTGRCASLLAVPRRGVDTRRCASKDAGPRRGVVPHRLEEGKSASED 756
                                                                       
Sbjct: 541 ------------------------------------------------------------ 297

Query: 757 AGCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTS 797
             CIAVKTTLS+  LK AGPS+IR+DIGNI+I+DIL+GGSD++
Sbjct: 601 --CIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTGGSDST 297

The following BLAST results are available for this feature:

BLAST of Carg27525 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024023.1	0.0e+00	100.00	hypothetical protein SDJN02_15052, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6590494.1	9.9e-171	53.37	Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022961409.1	2.4e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3 [Cucurbita moschata]	[more]
XP_022961408.1	2.4e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_022961407.1	2.4e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg27525 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ10	1.7e-61	32.81	Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg27525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBQ3	1.2e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1HDY1	1.2e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3 OS=Cucurbita moschat...	[more]
A0A6J1HA45	1.2e-140	50.00	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1HXU6	1.8e-138	49.28	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1HVI6	1.8e-138	49.28	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2 OS=Cucurbita maxima ...	[more]

BLAST of Carg27525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56500.1	1.2e-62	32.81	haloacid dehalogenase-like hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023198	Phosphoglycolate phosphatase-like, domain 2	GENE3D	1.10.150.240	Putative phosphatase; domain 2	coord: 247..287 e-value: 1.4E-8 score: 37.1
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 372..518 e-value: 1.0E-10 score: 43.2
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 610..661 e-value: 2.3E-5 score: 26.0
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 235..246 e-value: 1.4E-8 score: 37.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 667..706
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 844..868
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR46193:SF17	PROTEIN CBBY-LIKE	coord: 754..796 coord: 202..310
None	No IPR available	PANTHER	PTHR46193:SF17	PROTEIN CBBY-LIKE	coord: 365..415 coord: 618..650
None	No IPR available	PANTHER	PTHR46193:SF17	PROTEIN CBBY-LIKE	coord: 482..517
None	No IPR available	PANTHER	PTHR46193	6-PHOSPHOGLUCONATE PHOSPHATASE	coord: 482..517 coord: 618..650
None	No IPR available	PANTHER	PTHR46193	6-PHOSPHOGLUCONATE PHOSPHATASE	coord: 365..415 coord: 202..310
None	No IPR available	PANTHER	PTHR46193	6-PHOSPHOGLUCONATE PHOSPHATASE	coord: 754..796
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 227..515

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27525-RA	Carg27525-RA	mRNA