Carg27498 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCTAAAATAATAGAATTTCGAATTGGGGACTAATAGAATTTTGGGTTCTAATCTTTACAAAAACTTCCTCTTTAAACCACCACGCTACCAGCGACAACGAGGACTTGCGGCTTCGTTCGGCTCCTTTTTCCATTTGCAGTTGTATTTCTTTCATTTTCAGTTTGATTTCATATCGATTCTAAGAGTTAATTCGGGTGAGTTTCTCTAACGTATATCATAATTTCGTTTATGGGATTCTTCTGTACTCTGCTTGTTCTTGCCTTCTCTTGATTCCAATTTTCCAAGTGTATGAACTACTGGCTAATTCATTTTTTTCTTGCAAATTTGTTGAGTTTATTAGTAGGTTTATATGTTCACACTATGGGATTCATGTTTAGGGCTCTGGTTGTAGAATTAATAACTTGGAAGTTTCTTCCAGGAACTTCTATTTTGTTATTCAACACATCCTGCTGCTGCCCCTACTGTAGTTATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTGTAAGTCTGAATCTCTAGTCCATTAATCTGGGATGTTCTTTGGAAAAGGGAGATTGTTCTATAAACAACATTTTTGGAAGAAGTACTAACCAAGTTTTTTAGAACTTTCAGAATTAATTTTCTCTTTGTAAGCAAACATAGTGAAGAATTTGAAAAATGTTTTTCATTGTTCCAAAAGTTATACCAAACTCATCTTACGAATTTTAGGTATTAAGTACACAGGTCTTTTGTTATATTGTTTTTTGTTCTTACCTTGCAGAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGTTTGTTTTCTTCTAATGAAATGCCTTTTTGTAGTTGAAGAAATAACTAGCGAAAAGATTGTCTTGCATATGTTTGACTGAAACTAAATGATATAGGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCTGTTGACCCGATATTACATACCCTGACATTTGAGTATGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCAAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTTGTACCAATGAACTTGTGAGTTGAATCTTTGGTTATAATAATTTACAATGTGAGAAATTTTAGTTTGTCGTGCTAAGATTTGTAATAAATTGATCTCTGTCATAAGAGCAATTGTCTTTTCTCAGGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGGTTAGTTGGTTTCCCTTGCACTTGGTTTGCTGTAAGTTTTTTTTTTTTTTTTTTTTTGTCCTTCCCAATTAGAGATTCTTTTTCTATAAATGTAAACATTTGTGTGGTAAAGACTTATGTTGTTTATTATCCACCTGCGTGTAGCAATAGAATTAGTGATGGATAGGAGGAGATGACAATTAGAGTTCTATCGTGAGATCTCACCTCGGTTGGGGAGGAGAACAAAGTATTCTTTTTAAAGGTGTGGAAACCTCTCCTTAGCAGATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAAGAAAAGTCTAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGTCTATTACAAATGGTATTAGAGCTAGAAACTGGGTCATGTGCCAGCGAAGAGGTTGAGCCCTAAAGGGAGTGGACACGAGGCGGTGTGCCAGCAAAGACGCTAGGGCGGGGGGGGGGGGGGGGGGTGGGATTGGGAGGTCCCACATCGATTGTAGAAAGGGAACGAGTGCCAACGAGGACGCTGGGCCTCGAAGGGGGGGTGGATTGTGAGATACCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTTCTTAGCAGACACGTTTAAGAATTTTGAGAGGAAGCCCGAAAAGGAAAGCCCAAAAAAAACAACATTGGCTAGCGGTGGGTTTGGGCTGCTACATCTATCTAGATAGGAAGTACCCAAAAGATGTAACTATAAATCAAGACCCCTTGCTTCTCTCATGCACGATGTTATCTGCTGAATGACAAAAGAAGTTAACAGACTTCCGGCCTTCTGCTAGCCATATTTTACACCATCCTCCATGCAATTTTACAATTATATCATGCCTTCTGTGCCCATTCCTCTGACTATTCTCTTCATATTTCTCTAATCCTAGAACTATGCAAAAAGAGGGATATTGAGATTCCTCCCAGGATTCTCTCCTGCAAGCTGACATATTCATATTCTGCTAAATGACCAAAATAAATTAACAATTTTCTCTCGTTCTGTTAAGTGTATGTTTCTAACCTTCCCTCTTGCAACTCTACTGTTATCTCAGTGTAGAATTCGTAGCGTAGTTATAAAATGTGGTTCCCTTTCTTAGTCTAACTCAGTCGTGAGGGCTGCAGTTTACTAATGCTGTATTACAATAAACGACCCACAATTTTCTTCTGTTAGTTTGCTTGCTCAATTTGGGGCTGGTTTTTGGAGGCCGATGGGGGTAGTTTAGCCCGTAACTGGGACTGTTGACATACGTTGAAGAGGGTTTTCTTTCACCCTCCCCTCAGACATATGGCCGTTCCTCTAGAGTGCTAGTGTTTATGCAGTGTTATGGGATGGCTTGAGGGAAACAATAAAACCTGTGGAAAAGTGGTCTGGGAGGAGGAGGTATAGTCCCTTGCTAGGTTTGATGCCTCACTTGAGGCATCGGTCTCCGAAGTCTTTTGTTATTACATGTCAGGCTTAGGTTTGTGGCTCTCTTTTTAGGCTATCATTTAGTTGGCCCTCTTGTTGGTTTTTTGTTTTAGTGATTTTCATGCAATCCATATGACTACTTGTTGACAAACTGGGCTGAATTGATACCCAAATTGATATACATTGATGGTTCTTACATATTTTATAGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCGTCAACCTCGAACAAATTAGCTCAAGGTAGTGATCCCATTTTTATCATTCATTATCTGTTTTATTCCCTATGATTTCTTAGTTTACTTCTCTTGCTTTTCACTTTGATTTTACAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAACATCTCTCTTTTTAGTGACCCTTTGTAGTAGACTCATTGAACTTCTTGAACAATGTTTATGTAATTGCAATTCTTCAGGAAAAAACCTTCAGAGTCTTGTATTTAGTTATAGTGAAGTGTCTTTGACCATAAAAGCTATATATTTAAGTGAATCAGACGATTTGTTTTTGTTGTTTTGGAGATTTATAATTAGATGTGGTGAGCTTTTTGCACTTATGAGACTATTCCTGTAAGTTCGACTTTTACAGATTCTG TGGCTAAAATAATAGAATTTCGAATTGGGGACTAATAGAATTTTGGGTTCTAATCTTTACAAAAACTTCCTCTTTAAACCACCACGCTACCAGCGACAACGAGGACTTGCGGCTTCGTTCGGCTCCTTTTTCCATTTGCAGTTGTATTTCTTTCATTTTCAGTTTGATTTCATATCGATTCTAAGAGTTAATTCGGGAACTTCTATTTTGTTATTCAACACATCCTGCTGCTGCCCCTACTGTAGTTATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGTTTGTTTTCTTCTAATGAAATGCCTTTTTGTAGTTGAAGAAATAACTAGCGAAAAGATTGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCTGTTGACCCGATATTACATACCCTGACATTTGAGTATGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCAAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTTGTACCAATGAACTTGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCGTCAACCTCGAACAAATTAGCTCAAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAACATCTCTCTTTTTAGTGACCCTTTGTAGTAGACTCATTGAACTTCTTGAACAATGTTTATGTAATTGCAATTCTTCAGGAAAAAACCTTCAGAGTCTTGTATTTAGTTATAGTGAAGTGTCTTTGACCATAAAAGCTATATATTTAAGTGAATCAGACGATTTGTTTTTGTTGTTTTGGAGATTTATAATTAGATGTGGTGAGCTTTTTGCACTTATGAGACTATTCCTGTAAGTTCGACTTTTACAGATTCTG ATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGTTTGTTTTCTTCTAATGAAATGCCTTTTTGTAGTTGAAGAAATAACTAGCGAAAAGATTGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCTGTTGACCCGATATTACATACCCTGACATTTGAGTATGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCAAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTTGTACCAATGAACTTGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCGTCAACCTCGAACAAATTAGCTCAAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAA METKTDSNDGSLVLIKQGAEARVFESTFVGRRSIVKERFSKKYRHPSLDSKLTLKRLNAVCFLLMKCLFVVEEITSEKIEARCMTKARRLAVSTPVLYAVDPILHTLTFEYVEGRSVKDILLEIGSSGDGSKQLKDIAMQIGVAIGKLHDGGLIHGDLTTSNMLVRSCTNELVLIDFGLSFTSTIPEDKAVDLYVLERALLSMHSSCGNVMEQILASYRKTSKQWSSTSNKLAQVRQRGRKRTMVG Homology
BLAST of Carg27498 vs. NCBI nr
Match: KAG7022296.1 (EKC/KEOPS complex subunit bud32 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Carg27498 vs. NCBI nr
Match: KAG6588447.1 (EKC/KEOPS complex subunit bud32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417.5 bits (1072), Expect = 7.8e-113 Identity = 224/246 (91.06%), Postives = 225/246 (91.46%), Query Frame = 0
BLAST of Carg27498 vs. NCBI nr
Match: XP_022971395.1 (EKC/KEOPS complex subunit bud32 isoform X1 [Cucurbita maxima] >XP_022971403.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucurbita maxima]) HSP 1 Score: 417.5 bits (1072), Expect = 7.8e-113 Identity = 224/246 (91.06%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Carg27498 vs. NCBI nr
Match: XP_023529406.1 (EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo] >XP_023529407.1 EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 415.2 bits (1066), Expect = 3.9e-112 Identity = 223/246 (90.65%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Carg27498 vs. NCBI nr
Match: XP_022924768.1 (EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924777.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924786.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924793.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata]) HSP 1 Score: 414.5 bits (1064), Expect = 6.6e-112 Identity = 223/246 (90.65%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy Swiss-Prot
Match: Q54W07 (EKC/KEOPS complex subunit bud32 OS=Dictyostelium discoideum OX=44689 GN=bud32 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-44 Identity = 105/246 (42.68%), Postives = 141/246 (57.32%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy Swiss-Prot
Match: Q96S44 (EKC/KEOPS complex subunit TP53RK OS=Homo sapiens OX=9606 GN=TP53RK PE=1 SV=2) HSP 1 Score: 174.1 bits (440), Expect = 2.0e-42 Identity = 105/238 (44.12%), Postives = 142/238 (59.66%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy Swiss-Prot
Match: Q99PW4 (EKC/KEOPS complex subunit Tp53rk OS=Mus musculus OX=10090 GN=Tp53rk PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40 Identity = 104/238 (43.70%), Postives = 139/238 (58.40%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy Swiss-Prot
Match: Q4HYC1 (EKC/KEOPS complex subunit BUD32 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=BUD32 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.0e-34 Identity = 100/249 (40.16%), Postives = 134/249 (53.82%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy Swiss-Prot
Match: Q9P7N1 (EKC/KEOPS complex subunit SPAP27G11.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP27G11.07c PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33 Identity = 90/237 (37.97%), Postives = 134/237 (56.54%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy TrEMBL
Match: A0A6J1I5M0 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111470128 PE=3 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.8e-113 Identity = 224/246 (91.06%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy TrEMBL
Match: A0A6J1EDH5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111432168 PE=3 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 3.2e-112 Identity = 223/246 (90.65%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy TrEMBL
Match: A0A6J1DK25 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111021824 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108 Identity = 213/246 (86.59%), Postives = 219/246 (89.02%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy TrEMBL
Match: A0A1S3BPU1 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103492219 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 8.4e-105 Identity = 207/246 (84.15%), Postives = 217/246 (88.21%), Query Frame = 0
BLAST of Carg27498 vs. ExPASy TrEMBL
Match: A0A5D3CF78 (Non-specific serine/threonine protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003400 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 8.4e-105 Identity = 207/246 (84.15%), Postives = 217/246 (88.21%), Query Frame = 0
BLAST of Carg27498 vs. TAIR 10
Match: AT5G26110.1 (Protein kinase superfamily protein ) HSP 1 Score: 338.2 bits (866), Expect = 5.6e-93 Identity = 179/246 (72.76%), Postives = 200/246 (81.30%), Query Frame = 0
BLAST of Carg27498 vs. TAIR 10
Match: AT5G26110.2 (Protein kinase superfamily protein ) HSP 1 Score: 252.3 bits (643), Expect = 4.0e-67 Identity = 127/163 (77.91%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Carg27498 vs. TAIR 10
Match: AT1G08120.1 (BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G26110.1); Has 235 Blast hits to 235 proteins in 96 species: Archae - 21; Bacteria - 0; Metazoa - 117; Fungi - 8; Plants - 47; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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