Carg27483 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27483
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr20: 4718523 .. 4720643 (+)
RNA-Seq Expression	Carg27483
Synteny	Carg27483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTTATGCCTGTCATGGGCAACCTGCGTTCTCCACGCAATTGTTTCGATTTGTTCATCCTAAGGACAAATTTCTTTGGAATTCCATTATCCAATCCCACTTCTCCAATGGTGATTACCTACAGGCATTTGATTTCTACCTCGAGATGCGAGCATCGAGTAGCCTGCCAAACCAATTTACAATTCCCATGGTGGTTTCCACTTGTGCGGAACTAATGATGCTCAACCATGGCATGAACATTCATGGGTTGGCTTTGAAACTTGGGCTCTTTGTTGGTAATTCGGCTGTTGGTTCTTCTTTGATATACATGTATTCCAAATGTGGTAACGCAGAAAGTGCATCTCTCATGTTCAATGAAATTACTGTTAAGGATGTAGTTGCTTGGACTGCCCTTATAATTGGTTATGTCCAGAATAACGAGAGTGAGAAAGGTTTGAAATGTTTGTTTGAGATGCATAGGAATGGATGTACCCCAAATTATAGAACAATAGGAGGTGGGTTTCAAGCTTGTGTTGATTTGGATGCTTTAGTAGAGGGTAGATGCTTACATGGTTTGGCTTTAAAAAGTGGATTTCTCTGTTTTGAAGTCGTTAAATCTTCTATTCTCTCGATGTACTCGAGGTGTGGGTCACCTGAAGAAGCTTATCGTTGTTTTTTTAAATTGGAGCAAAAAGATCTCATCTCTTGGACATCAATTATTGCAGTTCACTCTAAACTCGGGTTAATGAGTGAATGTCTACATTTATTTTGGGAGATGCAGGCCAGTGGAATAATTCCAGATGACATCGTGATCAGTTGCATGCTTCTGGGTTTTGGTAATTTTGATAGAATCTCTGAAGGAAAAGCCTTCCATGCTTGGATTCTGAAACAATGTTGTGCAATGAGTGGAATAACTCACAATGCATTACTCTCCATGTATTGTAAGTTCGGACTCTTACGTACGGCAGATAAGATCTTCCATAGTTTCCATAGAAGCAGTGAAGATTGGAACACAATGATATTAGGATACAGCAATATGGGGGAGAAAGAAAAGTGTATAGACTTTTTCAGGGAGATGCACCTCTTAGGCATAGAACCTGATTTGAATAGTTTAGTTTCGGTCATTTCTTCATGTTTACCAGTCGGAGCTGTGAATATTGGTCGGTCTGTCCACTGCTATGCGATTAAAAACTCGATCATTGACAATGTATCAATAGCTAACTCACTCTTGGACATGTATGGAAAGCGTGGTAATTTAACCGCCGCATCGAGGATATTTCATAGGACACAACAAAAGGATATTGTCTCATGGAATACGCTGATTTCGTCCTACAAGCAAAGTGGGCACCCTTCTGAAGCAATTGATTTATTCGATAAAATGATTAAAGAAAAGTACAACCCCAACGGAGTTACCTGCGTAATAGTTCTTTCGGCATGTGCTCATCTTGCATCCTTAGATAAAGGTGAAAAAATTCACCAGTACATAAAGGAAAATGGATTTGAGACTGATATCACTGTTAGAACTGCATTGATTGATATGTATGCAAAATGTGGGGAGCTCGAGACATCAAGAACATTGTTCAACTCAATGGAAGAGAGGGATGTTATTTTGTGTAATGTCATGATATCAAATTATGGGATGCATGGACATGTGGAATCTGCTATTGAGATCTTCCAACTAATGGAAGACTCAAACATTAAACCAAATGCACTTACCTTTCTTTCTCTTCTCTCAGCTTGTAATCATGCAGGGCATATGGTAGAAGGAAGGCGTCTCTTTGATGTAATGCATAAATATGGTATCAAACCGAGTCTTAAGCACTATGCTTCTATGGTAGATCTTCTTGGCAGGTCAGGTAGCCTTGAAGAAGCGGAGGCTCTTGTTTTATCAATGCCCATCACGCCTGATGGCACTGTGTGGGGCTCCTTGTTAAGTGCTTGTAAACTTCACAATGAATTTGAAATGGGTATAAGGATTGCCAGACATGCAATTGAGTCTGATCCAAAAAATGATGGGTATTATATAGTATTGTCTGATCTGTATGGTTGCTTGGGAAGGTGGGAGGAAGTGGAAAAAGTTCGTGGTATGATGAAAGAAAGAGGGTTGGAGAAGAGAGCTGGCTGGAGTGCCCTATGA

mRNA sequence

ATGGCCTTTTATGCCTGTCATGGGCAACCTGCGTTCTCCACGCAATTGTTTCGATTTGTTCATCCTAAGGACAAATTTCTTTGGAATTCCATTATCCAATCCCACTTCTCCAATGGTGATTACCTACAGGCATTTGATTTCTACCTCGAGATGCGAGCATCGAGTAGCCTGCCAAACCAATTTACAATTCCCATGGTGGTTTCCACTTGTGCGGAACTAATGATGCTCAACCATGGCATGAACATTCATGGGTTGGCTTTGAAACTTGGGCTCTTTGTTGGTAATTCGGCTGTTGGTTCTTCTTTGATATACATGTATTCCAAATGTGGTAACGCAGAAAGTGCATCTCTCATGTTCAATGAAATTACTGTTAAGGATGTAGTTGCTTGGACTGCCCTTATAATTGGTTATGTCCAGAATAACGAGAGTGAGAAAGGTTTGAAATGTTTGTTTGAGATGCATAGGAATGGATGTACCCCAAATTATAGAACAATAGGAGGTGGGTTTCAAGCTTGTGTTGATTTGGATGCTTTAGTAGAGGGTAGATGCTTACATGGTTTGGCTTTAAAAAGTGGATTTCTCTGTTTTGAAGTCGTTAAATCTTCTATTCTCTCGATGTACTCGAGGTGTGGGTCACCTGAAGAAGCTTATCGTTGTTTTTTTAAATTGGAGCAAAAAGATCTCATCTCTTGGACATCAATTATTGCAGTTCACTCTAAACTCGGGTTAATGAGTGAATGTCTACATTTATTTTGGGAGATGCAGGCCAGTGGAATAATTCCAGATGACATCGTGATCAGTTGCATGCTTCTGGGTTTTGGTAATTTTGATAGAATCTCTGAAGGAAAAGCCTTCCATGCTTGGATTCTGAAACAATGTTGTGCAATGAGTGGAATAACTCACAATGCATTACTCTCCATGTATTGTAAGTTCGGACTCTTACGTACGGCAGATAAGATCTTCCATAGTTTCCATAGAAGCAGTGAAGATTGGAACACAATGATATTAGGATACAGCAATATGGGGGAGAAAGAAAAGTGTATAGACTTTTTCAGGGAGATGCACCTCTTAGGCATAGAACCTGATTTGAATAGTTTAGTTTCGGTCATTTCTTCATGTTTACCAGTCGGAGCTGTGAATATTGGTCGGTCTGTCCACTGCTATGCGATTAAAAACTCGATCATTGACAATGTATCAATAGCTAACTCACTCTTGGACATGTATGGAAAGCGTGGTAATTTAACCGCCGCATCGAGGATATTTCATAGGACACAACAAAAGGATATTGTCTCATGGAATACGCTGATTTCGTCCTACAAGCAAAGTGGGCACCCTTCTGAAGCAATTGATTTATTCGATAAAATGATTAAAGAAAAGTACAACCCCAACGGAGTTACCTGCGTAATAGTTCTTTCGGCATGTGCTCATCTTGCATCCTTAGATAAAGGTGAAAAAATTCACCAGTACATAAAGGAAAATGGATTTGAGACTGATATCACTGTTAGAACTGCATTGATTGATATGTATGCAAAATGTGGGGAGCTCGAGACATCAAGAACATTGTTCAACTCAATGGAAGAGAGGGATGTTATTTTGTGTAATGTCATGATATCAAATTATGGGATGCATGGACATGTGGAATCTGCTATTGAGATCTTCCAACTAATGGAAGACTCAAACATTAAACCAAATGCACTTACCTTTCTTTCTCTTCTCTCAGCTTGTAATCATGCAGGGCATATGGTAGAAGGAAGGCGTCTCTTTGATGTAATGCATAAATATGGTATCAAACCGAGTCTTAAGCACTATGCTTCTATGGTAGATCTTCTTGGCAGGTCAGGTAGCCTTGAAGAAGCGGAGGCTCTTGTTTTATCAATGCCCATCACGCCTGATGGCACTGTGTGGGGCTCCTTGTTAAGTGCTTGTAAACTTCACAATGAATTTGAAATGGGTATAAGGATTGCCAGACATGCAATTGAGTCTGATCCAAAAAATGATGGGTATTATATAGTATTGTCTGATCTGTATGGTTGCTTGGGAAGGTGGGAGGAAGTGGAAAAAGTTCGTGGTATGATGAAAGAAAGAGGGTTGGAGAAGAGAGCTGGCTGGAGTGCCCTATGA

Coding sequence (CDS)

ATGGCCTTTTATGCCTGTCATGGGCAACCTGCGTTCTCCACGCAATTGTTTCGATTTGTTCATCCTAAGGACAAATTTCTTTGGAATTCCATTATCCAATCCCACTTCTCCAATGGTGATTACCTACAGGCATTTGATTTCTACCTCGAGATGCGAGCATCGAGTAGCCTGCCAAACCAATTTACAATTCCCATGGTGGTTTCCACTTGTGCGGAACTAATGATGCTCAACCATGGCATGAACATTCATGGGTTGGCTTTGAAACTTGGGCTCTTTGTTGGTAATTCGGCTGTTGGTTCTTCTTTGATATACATGTATTCCAAATGTGGTAACGCAGAAAGTGCATCTCTCATGTTCAATGAAATTACTGTTAAGGATGTAGTTGCTTGGACTGCCCTTATAATTGGTTATGTCCAGAATAACGAGAGTGAGAAAGGTTTGAAATGTTTGTTTGAGATGCATAGGAATGGATGTACCCCAAATTATAGAACAATAGGAGGTGGGTTTCAAGCTTGTGTTGATTTGGATGCTTTAGTAGAGGGTAGATGCTTACATGGTTTGGCTTTAAAAAGTGGATTTCTCTGTTTTGAAGTCGTTAAATCTTCTATTCTCTCGATGTACTCGAGGTGTGGGTCACCTGAAGAAGCTTATCGTTGTTTTTTTAAATTGGAGCAAAAAGATCTCATCTCTTGGACATCAATTATTGCAGTTCACTCTAAACTCGGGTTAATGAGTGAATGTCTACATTTATTTTGGGAGATGCAGGCCAGTGGAATAATTCCAGATGACATCGTGATCAGTTGCATGCTTCTGGGTTTTGGTAATTTTGATAGAATCTCTGAAGGAAAAGCCTTCCATGCTTGGATTCTGAAACAATGTTGTGCAATGAGTGGAATAACTCACAATGCATTACTCTCCATGTATTGTAAGTTCGGACTCTTACGTACGGCAGATAAGATCTTCCATAGTTTCCATAGAAGCAGTGAAGATTGGAACACAATGATATTAGGATACAGCAATATGGGGGAGAAAGAAAAGTGTATAGACTTTTTCAGGGAGATGCACCTCTTAGGCATAGAACCTGATTTGAATAGTTTAGTTTCGGTCATTTCTTCATGTTTACCAGTCGGAGCTGTGAATATTGGTCGGTCTGTCCACTGCTATGCGATTAAAAACTCGATCATTGACAATGTATCAATAGCTAACTCACTCTTGGACATGTATGGAAAGCGTGGTAATTTAACCGCCGCATCGAGGATATTTCATAGGACACAACAAAAGGATATTGTCTCATGGAATACGCTGATTTCGTCCTACAAGCAAAGTGGGCACCCTTCTGAAGCAATTGATTTATTCGATAAAATGATTAAAGAAAAGTACAACCCCAACGGAGTTACCTGCGTAATAGTTCTTTCGGCATGTGCTCATCTTGCATCCTTAGATAAAGGTGAAAAAATTCACCAGTACATAAAGGAAAATGGATTTGAGACTGATATCACTGTTAGAACTGCATTGATTGATATGTATGCAAAATGTGGGGAGCTCGAGACATCAAGAACATTGTTCAACTCAATGGAAGAGAGGGATGTTATTTTGTGTAATGTCATGATATCAAATTATGGGATGCATGGACATGTGGAATCTGCTATTGAGATCTTCCAACTAATGGAAGACTCAAACATTAAACCAAATGCACTTACCTTTCTTTCTCTTCTCTCAGCTTGTAATCATGCAGGGCATATGGTAGAAGGAAGGCGTCTCTTTGATGTAATGCATAAATATGGTATCAAACCGAGTCTTAAGCACTATGCTTCTATGGTAGATCTTCTTGGCAGGTCAGGTAGCCTTGAAGAAGCGGAGGCTCTTGTTTTATCAATGCCCATCACGCCTGATGGCACTGTGTGGGGCTCCTTGTTAAGTGCTTGTAAACTTCACAATGAATTTGAAATGGGTATAAGGATTGCCAGACATGCAATTGAGTCTGATCCAAAAAATGATGGGTATTATATAGTATTGTCTGATCTGTATGGTTGCTTGGGAAGGTGGGAGGAAGTGGAAAAAGTTCGTGGTATGATGAAAGAAAGAGGGTTGGAGAAGAGAGCTGGCTGGAGTGCCCTATGA

Protein sequence

MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIEPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRIFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASLDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNYGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSLKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL

Homology

[Close]

BLAST of Carg27483 vs. NCBI nr
Match: KAG7010985.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1449.5 bits (3751), Expect = 0.0e+00
Identity = 706/706 (100.00%), Postives = 706/706 (100.00%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE
Sbjct: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK
Sbjct: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT
Sbjct: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE
Sbjct: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI
Sbjct: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL
Sbjct: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY
Sbjct: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL
Sbjct: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE
Sbjct: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL
Sbjct: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 706

[Close]

BLAST of Carg27483 vs. NCBI nr
Match: XP_023513090.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1431.0 bits (3703), Expect = 0.0e+00
Identity = 695/706 (98.44%), Postives = 702/706 (99.43%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 72  MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDL+ALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKA HAWILKQCCAMSGIT
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKALHAWILKQCCAMSGIT 371

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLR ADKIFHSFH+SSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE
Sbjct: 372 HNALLSMYCKFGLLRMADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 431

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGK GNLTAA RI
Sbjct: 432 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWRI 491

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK+NPNGVTCVIVLSAC+HLASL
Sbjct: 492 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNGVTCVIVLSACSHLASL 551

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY
Sbjct: 552 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 611

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL
Sbjct: 612 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 671

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE
Sbjct: 672 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 731

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRG+MK+RG+EKRAGWSAL
Sbjct: 732 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGLMKQRGVEKRAGWSAL 777

[Close]

BLAST of Carg27483 vs. NCBI nr
Match: XP_022986468.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 689/706 (97.59%), Postives = 703/706 (99.58%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 72  MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           +ITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDL+ALVE
Sbjct: 192 DITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSI+AVHSK
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIMAVHSK 311

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCA+SGIT
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAVSGIT 371

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFH+SSEDWNTMILGYSNMGEKEKCIDFFREM+LLGIE
Sbjct: 372 HNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMYLLGIE 431

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGK GNLTAA RI
Sbjct: 432 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWRI 491

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDI+SWNTLIS+YKQSGHPSEAIDLFDKMIKEK+NPNGVTC+IVLSACAHLASL
Sbjct: 492 FHRTQQKDIISWNTLISTYKQSGHPSEAIDLFDKMIKEKFNPNGVTCIIVLSACAHLASL 551

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGE+IHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY
Sbjct: 552 DKGERIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 611

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL
Sbjct: 612 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 671

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRI RHAIE
Sbjct: 672 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIGRHAIE 731

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRG+MK+RG+EKRAGWSAL
Sbjct: 732 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGVMKQRGVEKRAGWSAL 777

[Close]

BLAST of Carg27483 vs. NCBI nr
Match: XP_022944467.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1415.6 bits (3663), Expect = 0.0e+00
Identity = 691/706 (97.88%), Postives = 697/706 (98.73%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 72  MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 251

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEG AFHAWILKQC A+SGIT
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGNAFHAWILKQCYAVSGIT 371

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFH+SSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE
Sbjct: 372 HNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 431

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPV AVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGK GNLTAA RI
Sbjct: 432 PDLNSLVSVISSCLPVRAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWRI 491

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK+NPN VTCVI LSACAHLASL
Sbjct: 492 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNVVTCVIALSACAHLASL 551

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKG KIHQYIKENG ETDITVRTALIDMYAKCGELE+SRTLFNSMEERDVILCNVMISNY
Sbjct: 552 DKGLKIHQYIKENGCETDITVRTALIDMYAKCGELESSRTLFNSMEERDVILCNVMISNY 611

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGH+VEGRRLFDVMHKYGIKPSL
Sbjct: 612 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHIVEGRRLFDVMHKYGIKPSL 671

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE
Sbjct: 672 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 731

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERG+EKRAGWSAL
Sbjct: 732 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGVEKRAGWSAL 777

[Close]

BLAST of Carg27483 vs. NCBI nr
Match: KAG6571177.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1413.7 bits (3658), Expect = 0.0e+00
Identity = 688/689 (99.85%), Postives = 689/689 (100.00%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE
Sbjct: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK
Sbjct: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT
Sbjct: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE
Sbjct: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI
Sbjct: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK+NPNGVTCVIVLSACAHLASL
Sbjct: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNGVTCVIVLSACAHLASL 480

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY
Sbjct: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL
Sbjct: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE
Sbjct: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVR 690
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVR
Sbjct: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVR 689

[Close]

BLAST of Carg27483 vs. ExPASy Swiss-Prot
Match: Q3E9N1 (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E98 PE=2 SV=2)

HSP 1 Score: 741.9 bits (1914), Expect = 6.8e-213
Identity = 359/708 (50.71%), Postives = 492/708 (69.49%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTI 63
           YA +G+P  S+++F  V  +D FLWNSII++HFSNGDY ++  F+  M  S   P+ FT 
Sbjct: 69  YASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTA 128

Query: 64  PMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEIT 123
           PMVVS CAEL+  + G  +HGL LK G F  N+AVG+S +Y YSKCG  + A L+F+E+ 
Sbjct: 129 PMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188

Query: 124 VKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGC---TPNYRTIGGGFQACVDLDALVE 183
            +DVVAWTA+I G+VQN ESE GL  L +MH  G     PN RT+  GFQAC +L AL E
Sbjct: 189 DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248

Query: 184 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 243
           GRCLHG A+K+G    + V+SS+ S YS+ G+P EAY  F +L  +D+ SWTSIIA  ++
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308

Query: 244 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 303
            G M E   +FWEMQ  G+ PD +VISC++   G    + +GKAFH ++++ C ++    
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368

Query: 304 HNALLSMYCKFGLLRTADKIF--HSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLG 363
            N+LLSMYCKF LL  A+K+F   S   + E WNTM+ GY  M    KCI+ FR++  LG
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG 428

Query: 364 IEPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAAS 423
           IE D  S  SVISSC  +GAV +G+S+HCY +K S+   +S+ NSL+D+YGK G+LT A 
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488

Query: 424 RIFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLA 483
           R+F      ++++WN +I+SY       +AI LFD+M+ E + P+ +T V +L AC +  
Sbjct: 489 RMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 548

Query: 484 SLDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMIS 543
           SL++G+ IH+YI E   E ++++  ALIDMYAKCG LE SR LF++  ++D +  NVMIS
Sbjct: 549 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 608

Query: 544 NYGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKP 603
            YGMHG VESAI +F  ME+S++KP   TFL+LLSAC HAG + +G++LF  MH+Y +KP
Sbjct: 609 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP 668

Query: 604 SLKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHA 663
           +LKHY+ +VDLL RSG+LEEAE+ V+SMP +PDG +WG+LLS+C  H EFEMGIR+A  A
Sbjct: 669 NLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERA 728

Query: 664 IESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           + SDP+NDGYYI+L+++Y   G+WEE E+ R MM+E G+ KRAG S +
Sbjct: 729 VASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775

[Close]

BLAST of Carg27483 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 6.3e-118
Identity = 232/706 (32.86%), Postives = 397/706 (56.23%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTI 63
           YA  G P  S  +F      D F++  +I+ +        A D Y  + + ++  ++F  
Sbjct: 44  YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103

Query: 64  PMVVSTCA-ELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEI 123
           P V+  CA     L+ G  +HG  +K G+   ++ + +SL+ MY + GN   A  +F+ +
Sbjct: 104 PSVLRACAGSREHLSVGGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGM 163

Query: 124 TVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGR 183
            V+D+VAW+ L+   ++N E  K L+    M  +G  P+  T+    + C +L  L   R
Sbjct: 164 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 223

Query: 184 CLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLG 243
            +HG   +  F   E + +S+L+MYS+CG    + R F K+ +K+ +SWT++I+ +++  
Sbjct: 224 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 283

Query: 244 LMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHN 303
              + L  F EM  SGI P+ + +  +L   G    I EGK+ H + +++    +  + +
Sbjct: 284 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 343

Query: 304 -ALLSMYCKFGLLRTADKIFHSF-HRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 363
            AL+ +Y + G L   + +      R+   WN++I  Y++ G   + +  FR+M    I+
Sbjct: 344 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 403

Query: 364 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 423
           PD  +L S IS+C   G V +G+ +H + I+  + D   + NSL+DMY K G++ +AS +
Sbjct: 404 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTV 463

Query: 424 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 483
           F++ + + +V+WN+++  + Q+G+  EAI LFD M       N VT + V+ AC+ + SL
Sbjct: 464 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 523

Query: 484 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 543
           +KG+ +H  +  +G + D+   TALIDMYAKCG+L  + T+F +M  R ++  + MI+ Y
Sbjct: 524 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 583

Query: 544 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 603
           GMHG + SAI  F  M +S  KPN + F+++LSAC H+G + EG+  F++M  +G+ P+ 
Sbjct: 584 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 643

Query: 604 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 663
           +H+A  +DLL RSG L+EA   +  MP   D +VWGSL++ C++H + ++   I     +
Sbjct: 644 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD 703

Query: 664 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
               + GYY +LS++Y   G WEE  ++R  MK   L+K  G+SA+
Sbjct: 704 IVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746

[Close]

BLAST of Carg27483 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 8.2e-118
Identity = 232/704 (32.95%), Postives = 400/704 (56.82%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHP-KDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFT 63
           Y+   +PA S  +FR V P K+ +LWNSII++   NG + +A +FY ++R S   P+++T
Sbjct: 49  YSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT 108

Query: 64  IPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEI 123
            P V+  CA L     G  ++   L +G F  +  VG++L+ MYS+ G    A  +F+E+
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMG-FESDLFVGNALVDMYSRMGLLTRARQVFDEM 168

Query: 124 TVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGR 183
            V+D+V+W +LI GY  +   E+ L+   E+  +   P+  T+     A  +L  + +G+
Sbjct: 169 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 228

Query: 184 CLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLG 243
            LHG ALKSG     VV + +++MY +   P +A R F +++ +D +S+ ++I  + KL 
Sbjct: 229 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 288

Query: 244 LMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHN 303
           ++ E + +F E       PD + +S +L   G+   +S  K  + ++LK    +     N
Sbjct: 289 MVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 348

Query: 304 ALLSMYCKFGLLRTADKIFHSFH-RSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIEP 363
            L+ +Y K G + TA  +F+S   + +  WN++I GY   G+  + +  F+ M ++  + 
Sbjct: 349 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 408

Query: 364 DLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRIF 423
           D  + + +IS    +  +  G+ +H   IK+ I  ++S++N+L+DMY K G +  + +IF
Sbjct: 409 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 468

Query: 424 HRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASLD 483
                 D V+WNT+IS+  + G  +  + +  +M K +  P+  T ++ L  CA LA+  
Sbjct: 469 SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 528

Query: 484 KGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNYG 543
            G++IH  +   G+E+++ +  ALI+MY+KCG LE S  +F  M  RDV+    MI  YG
Sbjct: 529 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 588

Query: 544 MHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMH-KYGIKPSL 603
           M+G  E A+E F  ME S I P+++ F++++ AC+H+G + EG   F+ M   Y I P +
Sbjct: 589 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 648

Query: 604 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 663
           +HYA +VDLL RS  + +AE  + +MPI PD ++W S+L AC+   + E   R++R  IE
Sbjct: 649 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 708

Query: 664 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
            +P + GY I+ S+ Y  L +W++V  +R  +K++ + K  G+S
Sbjct: 709 LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750

[Close]

BLAST of Carg27483 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 7.2e-114
Identity = 222/694 (31.99%), Postives = 389/694 (56.05%), Query Frame = 0


Query: 15  QLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTIPMVVSTCAELM 74
           ++F  +  +  F WN++I ++ SNG+   A   Y  MR         + P ++  CA+L 
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196

Query: 75  MLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEITVK-DVVAWTAL 134
            +  G  +H L +KLG +     + ++L+ MY+K  +  +A  +F+    K D V W ++
Sbjct: 197 DIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 256

Query: 135 IIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGRCLHGLALKSGF 194
           +  Y  + +S + L+   EMH  G  PN  TI     AC        G+ +H   LKS  
Sbjct: 257 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 316

Query: 195 LCFEV-VKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLGLMSECLHLFW 254
              E+ V +++++MY+RCG   +A R   ++   D+++W S+I  + +  +  E L  F 
Sbjct: 317 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 376

Query: 255 EMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHNALLSMYCKFG 314
           +M A+G   D++ ++ ++   G    +  G   HA+++K     +    N L+ MY K  
Sbjct: 377 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 436

Query: 315 LLRTADKIFHSFH-RSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIEPDLNSLVSVIS 374
           L     + F   H +    W T+I GY+      + ++ FR++    +E D   L S++ 
Sbjct: 437 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 496

Query: 375 SCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRIFHRTQQKDIVS 434
           +   + ++ I + +HC+ ++  ++D V I N L+D+YGK  N+  A+R+F   + KD+VS
Sbjct: 497 ASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVS 556

Query: 435 WNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASLDKGEKIHQYIK 494
           W ++ISS   +G+ SEA++LF +M++   + + V  + +LSA A L++L+KG +IH Y+ 
Sbjct: 557 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 616

Query: 495 ENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNYGMHGHVESAIE 554
             GF  + ++  A++DMYA CG+L++++ +F+ +E + ++    MI+ YGMHG  ++A+E
Sbjct: 617 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 676

Query: 555 IFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVM-HKYGIKPSLKHYASMVDLL 614
           +F  M   N+ P+ ++FL+LL AC+HAG + EGR    +M H+Y ++P  +HY  +VD+L
Sbjct: 677 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 736

Query: 615 GRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIESDPKNDGYYI 674
           GR+  + EA   V  M   P   VW +LL+AC+ H+E E+G   A+  +E +PKN G  +
Sbjct: 737 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 796

Query: 675 VLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
           ++S+++   GRW +VEKVR  MK  G+EK  G S
Sbjct: 797 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828

[Close]

BLAST of Carg27483 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 7.2e-114
Identity = 220/646 (34.06%), Postives = 375/646 (58.05%), Query Frame = 0


Query: 62  TIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNE 121
           T+  V+  CA+   L  G  +       G FV +S +GS L  MY+ CG+ + AS +F+E
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEASRVFDE 155

Query: 122 ITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEG 181
           + ++  + W  L+    ++ +    +    +M  +G   +  T     ++   L ++  G
Sbjct: 156 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 215

Query: 182 RCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKL 241
             LHG  LKSGF     V +S+++ Y +    + A + F ++ ++D+ISW SII  +   
Sbjct: 216 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 275

Query: 242 GLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITH 301
           GL  + L +F +M  SGI  D   I  +  G  +   IS G+A H+  +K C +      
Sbjct: 276 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 335

Query: 302 NALLSMYCKFGLLRTADKIFHSF-HRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 361
           N LL MY K G L +A  +F     RS   + +MI GY+  G   + +  F EM   GI 
Sbjct: 336 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 395

Query: 362 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 421
           PD+ ++ +V++ C     ++ G+ VH +  +N +  ++ ++N+L+DMY K G++  A  +
Sbjct: 396 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 455

Query: 422 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK-YNPNGVTCVIVLSACAHLAS 481
           F   + KDI+SWNT+I  Y ++ + +EA+ LF+ +++EK ++P+  T   VL ACA L++
Sbjct: 456 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 515

Query: 482 LDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 541
            DKG +IH YI  NG+ +D  V  +L+DMYAKCG L  +  LF+ +  +D++   VMI+ 
Sbjct: 516 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 575

Query: 542 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVM-HKYGIKP 601
           YGMHG  + AI +F  M  + I+ + ++F+SLL AC+H+G + EG R F++M H+  I+P
Sbjct: 576 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 635

Query: 602 SLKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHA 661
           +++HYA +VD+L R+G L +A   + +MPI PD T+WG+LL  C++H++ ++  ++A   
Sbjct: 636 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 695

Query: 662 IESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
            E +P+N GYY++++++Y    +WE+V+++R  + +RGL K  G S
Sbjct: 696 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740

[Close]

BLAST of Carg27483 vs. ExPASy TrEMBL
Match: A0A6J1JGK6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484200 PE=4 SV=1)

HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 689/706 (97.59%), Postives = 703/706 (99.58%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 72  MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           +ITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDL+ALVE
Sbjct: 192 DITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSI+AVHSK
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIMAVHSK 311

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCA+SGIT
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAVSGIT 371

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFH+SSEDWNTMILGYSNMGEKEKCIDFFREM+LLGIE
Sbjct: 372 HNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMYLLGIE 431

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGK GNLTAA RI
Sbjct: 432 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWRI 491

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDI+SWNTLIS+YKQSGHPSEAIDLFDKMIKEK+NPNGVTC+IVLSACAHLASL
Sbjct: 492 FHRTQQKDIISWNTLISTYKQSGHPSEAIDLFDKMIKEKFNPNGVTCIIVLSACAHLASL 551

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGE+IHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY
Sbjct: 552 DKGERIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 611

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL
Sbjct: 612 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 671

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRI RHAIE
Sbjct: 672 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIGRHAIE 731

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRG+MK+RG+EKRAGWSAL
Sbjct: 732 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGVMKQRGVEKRAGWSAL 777

[Close]

BLAST of Carg27483 vs. ExPASy TrEMBL
Match: A0A6J1FVR1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448916 PE=4 SV=1)

HSP 1 Score: 1415.6 bits (3663), Expect = 0.0e+00
Identity = 691/706 (97.88%), Postives = 697/706 (98.73%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ
Sbjct: 72  MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 251

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
           LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEG AFHAWILKQC A+SGIT
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGNAFHAWILKQCYAVSGIT 371

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFGLLRTADKIFHSFH+SSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE
Sbjct: 372 HNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 431

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSCLPV AVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGK GNLTAA RI
Sbjct: 432 PDLNSLVSVISSCLPVRAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWRI 491

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK+NPN VTCVI LSACAHLASL
Sbjct: 492 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNVVTCVIALSACAHLASL 551

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKG KIHQYIKENG ETDITVRTALIDMYAKCGELE+SRTLFNSMEERDVILCNVMISNY
Sbjct: 552 DKGLKIHQYIKENGCETDITVRTALIDMYAKCGELESSRTLFNSMEERDVILCNVMISNY 611

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGH+VEGRRLFDVMHKYGIKPSL
Sbjct: 612 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHIVEGRRLFDVMHKYGIKPSL 671

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE
Sbjct: 672 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 731

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERG+EKRAGWSAL
Sbjct: 732 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGVEKRAGWSAL 777

[Close]

BLAST of Carg27483 vs. ExPASy TrEMBL
Match: A0A1S3C9K9 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498381 PE=4 SV=1)

HSP 1 Score: 1251.1 bits (3236), Expect = 0.0e+00
Identity = 601/706 (85.13%), Postives = 652/706 (92.35%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYA H QPAFST LFR +H KD FLWNSIIQSHFSNGDY +AFDFYL+MRASSSLPNQ
Sbjct: 124 MAFYASHRQPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQ 183

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FT+PMVVSTCAELMM NHGMNIHGL  KLGLFV NSA+GSS IYMYSKCG+ ESASLMF+
Sbjct: 184 FTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVSNSAIGSSFIYMYSKCGHVESASLMFS 243

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALI+GYVQNNES +GLKCLFEMHR G TPNY+TIG GFQACVDLDALVE
Sbjct: 244 EITVKDVVAWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVE 303

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           G+CLHGLALK+GFLCF+VVKS+ILSMYSRCGSPEEAYRCF KL+QKDLISWTSIIAVHSK
Sbjct: 304 GKCLHGLALKNGFLCFKVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 363

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
            GLMSECLHLFWEMQ S IIPD+IVISCML+GFGN  RI EGKAFHAWILKQCCAM+GIT
Sbjct: 364 FGLMSECLHLFWEMQDSEIIPDEIVISCMLMGFGNSGRIFEGKAFHAWILKQCCAMNGIT 423

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFG L TA+KIFHSFH+SSEDW+TMILGYSNMG+KE CI F REM LLG E
Sbjct: 424 HNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNMGQKENCISFLREMLLLGRE 483

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSC  VGA+NIGRS+HCYAIKNSII+NVSIANSL+DMYGK G++TA  RI
Sbjct: 484 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSIANSLMDMYGKSGHVTATWRI 543

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQ+D++SWNTLISSYKQSG+ +EAI LFDKM+KEK  PN VTCVIVLS CAHLASL
Sbjct: 544 FHRTQQRDVISWNTLISSYKQSGNLAEAIILFDKMVKEKVYPNKVTCVIVLSVCAHLASL 603

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGEKIHQYIKENGFE++IT+RTALIDMYAKCGELETSR LFNS EERD IL NVMISNY
Sbjct: 604 DKGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDAILWNVMISNY 663

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESA+EIFQLME+SNIKPNA TFLSLLSACNH GH++EGR LFD M KYGI+PSL
Sbjct: 664 GMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRDLFDRMTKYGIEPSL 723

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYAS++DLLGRSGSLE AEALVLSMPITPDGTVWGSLLSACK+HNEFEMG+R+AR+AIE
Sbjct: 724 KHYASVIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEMGVRLARYAIE 783

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYI+LSDLY CLGRW+EVEKVRGMMKERG+EKR GWSAL
Sbjct: 784 SDPKNDGYYIILSDLYSCLGRWDEVEKVRGMMKERGVEKRTGWSAL 829

[Close]

BLAST of Carg27483 vs. ExPASy TrEMBL
Match: A0A1S4E2D5 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498381 PE=4 SV=1)

HSP 1 Score: 1251.1 bits (3236), Expect = 0.0e+00
Identity = 601/706 (85.13%), Postives = 652/706 (92.35%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYA H QPAFST LFR +H KD FLWNSIIQSHFSNGDY +AFDFYL+MRASSSLPNQ
Sbjct: 79  MAFYASHRQPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQ 138

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FT+PMVVSTCAELMM NHGMNIHGL  KLGLFV NSA+GSS IYMYSKCG+ ESASLMF+
Sbjct: 139 FTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVSNSAIGSSFIYMYSKCGHVESASLMFS 198

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVVAWTALI+GYVQNNES +GLKCLFEMHR G TPNY+TIG GFQACVDLDALVE
Sbjct: 199 EITVKDVVAWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVE 258

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           G+CLHGLALK+GFLCF+VVKS+ILSMYSRCGSPEEAYRCF KL+QKDLISWTSIIAVHSK
Sbjct: 259 GKCLHGLALKNGFLCFKVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 318

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
            GLMSECLHLFWEMQ S IIPD+IVISCML+GFGN  RI EGKAFHAWILKQCCAM+GIT
Sbjct: 319 FGLMSECLHLFWEMQDSEIIPDEIVISCMLMGFGNSGRIFEGKAFHAWILKQCCAMNGIT 378

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFG L TA+KIFHSFH+SSEDW+TMILGYSNMG+KE CI F REM LLG E
Sbjct: 379 HNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNMGQKENCISFLREMLLLGRE 438

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSC  VGA+NIGRS+HCYAIKNSII+NVSIANSL+DMYGK G++TA  RI
Sbjct: 439 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSIANSLMDMYGKSGHVTATWRI 498

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRTQQ+D++SWNTLISSYKQSG+ +EAI LFDKM+KEK  PN VTCVIVLS CAHLASL
Sbjct: 499 FHRTQQRDVISWNTLISSYKQSGNLAEAIILFDKMVKEKVYPNKVTCVIVLSVCAHLASL 558

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           DKGEKIHQYIKENGFE++IT+RTALIDMYAKCGELETSR LFNS EERD IL NVMISNY
Sbjct: 559 DKGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDAILWNVMISNY 618

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESA+EIFQLME+SNIKPNA TFLSLLSACNH GH++EGR LFD M KYGI+PSL
Sbjct: 619 GMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRDLFDRMTKYGIEPSL 678

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYAS++DLLGRSGSLE AEALVLSMPITPDGTVWGSLLSACK+HNEFEMG+R+AR+AIE
Sbjct: 679 KHYASVIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEMGVRLARYAIE 738

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYI+LSDLY CLGRW+EVEKVRGMMKERG+EKR GWSAL
Sbjct: 739 SDPKNDGYYIILSDLYSCLGRWDEVEKVRGMMKERGVEKRTGWSAL 784

[Close]

BLAST of Carg27483 vs. ExPASy TrEMBL
Match: A0A0A0LRH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G439160 PE=4 SV=1)

HSP 1 Score: 1246.1 bits (3223), Expect = 0.0e+00
Identity = 598/706 (84.70%), Postives = 654/706 (92.63%), Query Frame = 0


Query: 1   MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
           MAFYA H +PAFST LFR +H KD FLWNSIIQSHFSNGDY +AFDFYL+MRASSSLPNQ
Sbjct: 79  MAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQ 138

Query: 61  FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
           FT+PMVVSTCAELMM NHGMNIHGL  KLGLFVGNSA+GSS IYMYSKCG+ ESAS+MF+
Sbjct: 139 FTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFS 198

Query: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
           EITVKDVV WTALI+GYVQNNES +GLKCLFEMHR G TPNY+TIG GFQACVDLDALVE
Sbjct: 199 EITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVE 258

Query: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
           G+CLHGLALK+GFLCFEVVKS+ILSMYSRCGSPEEAYRCF KL+QKDLISWTSIIAVHSK
Sbjct: 259 GKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 318

Query: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 300
            GLMSECLHLFWEMQAS IIPD+IVISCML+GFGN DRI EGKAFHA ILKQCCA+SGIT
Sbjct: 319 FGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGIT 378

Query: 301 HNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 360
           HNALLSMYCKFG L TA+KIFHSFH+SSEDW+TMILGYSNMG+KEKCI F REM LLG E
Sbjct: 379 HNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGRE 438

Query: 361 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 420
           PDLNSLVSVISSC  VGA+NIGRS+HCYAIKNSII+NVS+ANSL+DMYGK G++TA  RI
Sbjct: 439 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRI 498

Query: 421 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 480
           FHRT Q+D++SWNTLISSYKQSG  +EAI LFDKM+KEK  PN VTC+IVLSACAHLASL
Sbjct: 499 FHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASL 558

Query: 481 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 540
           D+GEKIHQYIKENGFE++IT+RTALIDMYAKCGELETSR LFNS EERDVIL NVMISNY
Sbjct: 559 DEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNY 618

Query: 541 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 600
           GMHGHVESA+EIFQLME+SNIKPNA TFLSLLSACNH GH++EGR LFD M KYGI+PSL
Sbjct: 619 GMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSL 678

Query: 601 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 660
           KHYAS++DLLGRSGSLE AEALVLSMPITPDGTVWGSLLSACK+HNEFE+G+R+AR+AIE
Sbjct: 679 KHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIE 738

Query: 661 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           SDPKNDGYYI+LSDLY CLGRW+EVEKVR MMK+RG+EKRAGWSAL
Sbjct: 739 SDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWSAL 784

[Close]

BLAST of Carg27483 vs. TAIR 10
Match: AT4G39952.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 741.9 bits (1914), Expect = 4.8e-214
Identity = 359/708 (50.71%), Postives = 492/708 (69.49%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTI 63
           YA +G+P  S+++F  V  +D FLWNSII++HFSNGDY ++  F+  M  S   P+ FT 
Sbjct: 69  YASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTA 128

Query: 64  PMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEIT 123
           PMVVS CAEL+  + G  +HGL LK G F  N+AVG+S +Y YSKCG  + A L+F+E+ 
Sbjct: 129 PMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188

Query: 124 VKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGC---TPNYRTIGGGFQACVDLDALVE 183
            +DVVAWTA+I G+VQN ESE GL  L +MH  G     PN RT+  GFQAC +L AL E
Sbjct: 189 DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248

Query: 184 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 243
           GRCLHG A+K+G    + V+SS+ S YS+ G+P EAY  F +L  +D+ SWTSIIA  ++
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308

Query: 244 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGIT 303
            G M E   +FWEMQ  G+ PD +VISC++   G    + +GKAFH ++++ C ++    
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368

Query: 304 HNALLSMYCKFGLLRTADKIF--HSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLG 363
            N+LLSMYCKF LL  A+K+F   S   + E WNTM+ GY  M    KCI+ FR++  LG
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG 428

Query: 364 IEPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAAS 423
           IE D  S  SVISSC  +GAV +G+S+HCY +K S+   +S+ NSL+D+YGK G+LT A 
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488

Query: 424 RIFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLA 483
           R+F      ++++WN +I+SY       +AI LFD+M+ E + P+ +T V +L AC +  
Sbjct: 489 RMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 548

Query: 484 SLDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMIS 543
           SL++G+ IH+YI E   E ++++  ALIDMYAKCG LE SR LF++  ++D +  NVMIS
Sbjct: 549 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 608

Query: 544 NYGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKP 603
            YGMHG VESAI +F  ME+S++KP   TFL+LLSAC HAG + +G++LF  MH+Y +KP
Sbjct: 609 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP 668

Query: 604 SLKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHA 663
           +LKHY+ +VDLL RSG+LEEAE+ V+SMP +PDG +WG+LLS+C  H EFEMGIR+A  A
Sbjct: 669 NLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERA 728

Query: 664 IESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
           + SDP+NDGYYI+L+++Y   G+WEE E+ R MM+E G+ KRAG S +
Sbjct: 729 VASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775

[Close]

BLAST of Carg27483 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.5e-119
Identity = 232/706 (32.86%), Postives = 397/706 (56.23%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTI 63
           YA  G P  S  +F      D F++  +I+ +        A D Y  + + ++  ++F  
Sbjct: 44  YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103

Query: 64  PMVVSTCA-ELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEI 123
           P V+  CA     L+ G  +HG  +K G+   ++ + +SL+ MY + GN   A  +F+ +
Sbjct: 104 PSVLRACAGSREHLSVGGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGM 163

Query: 124 TVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGR 183
            V+D+VAW+ L+   ++N E  K L+    M  +G  P+  T+    + C +L  L   R
Sbjct: 164 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 223

Query: 184 CLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLG 243
            +HG   +  F   E + +S+L+MYS+CG    + R F K+ +K+ +SWT++I+ +++  
Sbjct: 224 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 283

Query: 244 LMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHN 303
              + L  F EM  SGI P+ + +  +L   G    I EGK+ H + +++    +  + +
Sbjct: 284 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 343

Query: 304 -ALLSMYCKFGLLRTADKIFHSF-HRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 363
            AL+ +Y + G L   + +      R+   WN++I  Y++ G   + +  FR+M    I+
Sbjct: 344 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 403

Query: 364 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 423
           PD  +L S IS+C   G V +G+ +H + I+  + D   + NSL+DMY K G++ +AS +
Sbjct: 404 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTV 463

Query: 424 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASL 483
           F++ + + +V+WN+++  + Q+G+  EAI LFD M       N VT + V+ AC+ + SL
Sbjct: 464 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 523

Query: 484 DKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNY 543
           +KG+ +H  +  +G + D+   TALIDMYAKCG+L  + T+F +M  R ++  + MI+ Y
Sbjct: 524 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 583

Query: 544 GMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPSL 603
           GMHG + SAI  F  M +S  KPN + F+++LSAC H+G + EG+  F++M  +G+ P+ 
Sbjct: 584 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 643

Query: 604 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 663
           +H+A  +DLL RSG L+EA   +  MP   D +VWGSL++ C++H + ++   I     +
Sbjct: 644 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD 703

Query: 664 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 707
               + GYY +LS++Y   G WEE  ++R  MK   L+K  G+SA+
Sbjct: 704 IVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746

[Close]

BLAST of Carg27483 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 5.8e-119
Identity = 232/704 (32.95%), Postives = 400/704 (56.82%), Query Frame = 0


Query: 4   YACHGQPAFSTQLFRFVHP-KDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFT 63
           Y+   +PA S  +FR V P K+ +LWNSII++   NG + +A +FY ++R S   P+++T
Sbjct: 49  YSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT 108

Query: 64  IPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEI 123
            P V+  CA L     G  ++   L +G F  +  VG++L+ MYS+ G    A  +F+E+
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMG-FESDLFVGNALVDMYSRMGLLTRARQVFDEM 168

Query: 124 TVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGR 183
            V+D+V+W +LI GY  +   E+ L+   E+  +   P+  T+     A  +L  + +G+
Sbjct: 169 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 228

Query: 184 CLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLG 243
            LHG ALKSG     VV + +++MY +   P +A R F +++ +D +S+ ++I  + KL 
Sbjct: 229 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 288

Query: 244 LMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHN 303
           ++ E + +F E       PD + +S +L   G+   +S  K  + ++LK    +     N
Sbjct: 289 MVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 348

Query: 304 ALLSMYCKFGLLRTADKIFHSFH-RSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIEP 363
            L+ +Y K G + TA  +F+S   + +  WN++I GY   G+  + +  F+ M ++  + 
Sbjct: 349 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 408

Query: 364 DLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRIF 423
           D  + + +IS    +  +  G+ +H   IK+ I  ++S++N+L+DMY K G +  + +IF
Sbjct: 409 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 468

Query: 424 HRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASLD 483
                 D V+WNT+IS+  + G  +  + +  +M K +  P+  T ++ L  CA LA+  
Sbjct: 469 SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 528

Query: 484 KGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNYG 543
            G++IH  +   G+E+++ +  ALI+MY+KCG LE S  +F  M  RDV+    MI  YG
Sbjct: 529 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 588

Query: 544 MHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMH-KYGIKPSL 603
           M+G  E A+E F  ME S I P+++ F++++ AC+H+G + EG   F+ M   Y I P +
Sbjct: 589 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 648

Query: 604 KHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIE 663
           +HYA +VDLL RS  + +AE  + +MPI PD ++W S+L AC+   + E   R++R  IE
Sbjct: 649 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 708

Query: 664 SDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
            +P + GY I+ S+ Y  L +W++V  +R  +K++ + K  G+S
Sbjct: 709 LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750

[Close]

BLAST of Carg27483 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 412.9 bits (1060), Expect = 5.1e-115
Identity = 222/694 (31.99%), Postives = 389/694 (56.05%), Query Frame = 0


Query: 15  QLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQFTIPMVVSTCAELM 74
           ++F  +  +  F WN++I ++ SNG+   A   Y  MR         + P ++  CA+L 
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196

Query: 75  MLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNEITVK-DVVAWTAL 134
            +  G  +H L +KLG +     + ++L+ MY+K  +  +A  +F+    K D V W ++
Sbjct: 197 DIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 256

Query: 135 IIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEGRCLHGLALKSGF 194
           +  Y  + +S + L+   EMH  G  PN  TI     AC        G+ +H   LKS  
Sbjct: 257 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 316

Query: 195 LCFEV-VKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKLGLMSECLHLFW 254
              E+ V +++++MY+RCG   +A R   ++   D+++W S+I  + +  +  E L  F 
Sbjct: 317 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 376

Query: 255 EMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITHNALLSMYCKFG 314
           +M A+G   D++ ++ ++   G    +  G   HA+++K     +    N L+ MY K  
Sbjct: 377 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 436

Query: 315 LLRTADKIFHSFH-RSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIEPDLNSLVSVIS 374
           L     + F   H +    W T+I GY+      + ++ FR++    +E D   L S++ 
Sbjct: 437 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 496

Query: 375 SCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRIFHRTQQKDIVS 434
           +   + ++ I + +HC+ ++  ++D V I N L+D+YGK  N+  A+R+F   + KD+VS
Sbjct: 497 ASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVS 556

Query: 435 WNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLASLDKGEKIHQYIK 494
           W ++ISS   +G+ SEA++LF +M++   + + V  + +LSA A L++L+KG +IH Y+ 
Sbjct: 557 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 616

Query: 495 ENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISNYGMHGHVESAIE 554
             GF  + ++  A++DMYA CG+L++++ +F+ +E + ++    MI+ YGMHG  ++A+E
Sbjct: 617 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 676

Query: 555 IFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVM-HKYGIKPSLKHYASMVDLL 614
           +F  M   N+ P+ ++FL+LL AC+HAG + EGR    +M H+Y ++P  +HY  +VD+L
Sbjct: 677 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 736

Query: 615 GRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAIESDPKNDGYYI 674
           GR+  + EA   V  M   P   VW +LL+AC+ H+E E+G   A+  +E +PKN G  +
Sbjct: 737 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 796

Query: 675 VLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
           ++S+++   GRW +VEKVR  MK  G+EK  G S
Sbjct: 797 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828

[Close]

BLAST of Carg27483 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 412.9 bits (1060), Expect = 5.1e-115
Identity = 220/646 (34.06%), Postives = 375/646 (58.05%), Query Frame = 0


Query: 62  TIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFNE 121
           T+  V+  CA+   L  G  +       G FV +S +GS L  MY+ CG+ + AS +F+E
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEASRVFDE 155

Query: 122 ITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVEG 181
           + ++  + W  L+    ++ +    +    +M  +G   +  T     ++   L ++  G
Sbjct: 156 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 215

Query: 182 RCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSKL 241
             LHG  LKSGF     V +S+++ Y +    + A + F ++ ++D+ISW SII  +   
Sbjct: 216 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 275

Query: 242 GLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGITH 301
           GL  + L +F +M  SGI  D   I  +  G  +   IS G+A H+  +K C +      
Sbjct: 276 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 335

Query: 302 NALLSMYCKFGLLRTADKIFHSF-HRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGIE 361
           N LL MY K G L +A  +F     RS   + +MI GY+  G   + +  F EM   GI 
Sbjct: 336 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 395

Query: 362 PDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASRI 421
           PD+ ++ +V++ C     ++ G+ VH +  +N +  ++ ++N+L+DMY K G++  A  +
Sbjct: 396 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 455

Query: 422 FHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEK-YNPNGVTCVIVLSACAHLAS 481
           F   + KDI+SWNT+I  Y ++ + +EA+ LF+ +++EK ++P+  T   VL ACA L++
Sbjct: 456 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 515

Query: 482 LDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 541
            DKG +IH YI  NG+ +D  V  +L+DMYAKCG L  +  LF+ +  +D++   VMI+ 
Sbjct: 516 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 575

Query: 542 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVM-HKYGIKP 601
           YGMHG  + AI +F  M  + I+ + ++F+SLL AC+H+G + EG R F++M H+  I+P
Sbjct: 576 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 635

Query: 602 SLKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHA 661
           +++HYA +VD+L R+G L +A   + +MPI PD T+WG+LL  C++H++ ++  ++A   
Sbjct: 636 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 695

Query: 662 IESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWS 705
            E +P+N GYY++++++Y    +WE+V+++R  + +RGL K  G S
Sbjct: 696 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740

The following BLAST results are available for this feature:

BLAST of Carg27483 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010985.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023513090.1	0.0e+00	98.44	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito...	[more]
XP_022986468.1	0.0e+00	97.59	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito...	[more]
XP_022944467.1	0.0e+00	97.88	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito...	[more]
KAG6571177.1	0.0e+00	99.85	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Carg27483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E9N1	6.8e-213	50.71	Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidop...	[more]
Q9C507	6.3e-118	32.86	Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS...	[more]
Q9SS60	8.2e-118	32.95	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX...	[more]
Q9M1V3	7.2e-114	31.99	Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop...	[more]
Q9SN39	7.2e-114	34.06	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Carg27483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JGK6	0.0e+00	97.59	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito...	[more]
A0A6J1FVR1	0.0e+00	97.88	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito...	[more]
A0A1S3C9K9	0.0e+00	85.13	pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 ...	[more]
A0A1S4E2D5	0.0e+00	85.13	pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X2 ...	[more]
A0A0A0LRH3	0.0e+00	84.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G439160 PE=4 SV=1	[more]

BLAST of Carg27483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39952.1	4.8e-214	50.71	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G69350.1	4.5e-119	32.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G03580.1	5.8e-119	32.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G63370.1	5.1e-115	31.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	5.1e-115	34.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 603..626 e-value: 0.39 score: 11.1 coord: 229..259 e-value: 2.4E-5 score: 24.3 coord: 671..697 e-value: 0.055 score: 13.7 coord: 331..359 e-value: 9.5E-5 score: 22.4 coord: 27..53 e-value: 0.003 score: 17.7 coord: 201..227 e-value: 0.044 score: 14.0 coord: 299..324 e-value: 0.0062 score: 16.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 529..575 e-value: 4.8E-10 score: 39.5 coord: 125..165 e-value: 4.2E-7 score: 30.1 coord: 427..475 e-value: 3.0E-12 score: 46.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 229..262 e-value: 1.8E-4 score: 19.5 coord: 503..530 e-value: 0.001 score: 17.1 coord: 331..362 e-value: 3.1E-6 score: 25.0 coord: 532..565 e-value: 6.0E-8 score: 30.4 coord: 27..59 e-value: 1.4E-4 score: 19.8 coord: 567..599 e-value: 6.9E-5 score: 20.8 coord: 299..327 e-value: 0.0028 score: 15.7 coord: 430..463 e-value: 3.9E-8 score: 31.0 coord: 128..161 e-value: 3.8E-7 score: 27.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 227..261 score: 10.599635
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 10.544828
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 564..598 score: 10.39137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 24..58 score: 9.437737
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..462 score: 12.67132
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 126..160 score: 10.709248
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 529..563 score: 11.290196
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 278..380 e-value: 5.9E-15 score: 57.0 coord: 184..277 e-value: 6.8E-15 score: 56.9 coord: 381..478 e-value: 2.2E-21 score: 78.0 coord: 479..579 e-value: 2.0E-24 score: 87.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 580..705 e-value: 2.2E-16 score: 62.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 23..183 e-value: 3.8E-21 score: 77.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 421..685
None	No IPR available	PANTHER	PTHR47924:SF46	PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 366..705
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 366..705
None	No IPR available	PANTHER	PTHR47924:SF46	PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 169..476 coord: 10..362
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 169..476 coord: 10..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27483-RA	Carg27483-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding