
Carg27482 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTAACAGTTTCTAATAATCTTCGTCTTGTTTTCGGCTTTTAAACTTCTTATACATATTTTTTCATTCAATATTTGATACGTCGTTCGGTTTGAGAGTTGTTTTATTGAAGACTTGTTTTTATTGATGTCTCAATTTTATGTAAATGTCTCCATTTGTTAATGTAAATTTCTAAGACAAAATTATATATATAAAAAAAGAAGATAATATTAAAAGAATATTTAATATTTATATTATATTATATTATATTATATTAAGGACATTTTGTTATTATTTTTTTTATGTTTTAAATTTATTTAAGATTTCTTGAGTTTTTCTTTTAAAATGTGAATTATACCAAAGAATTGGTCTACCTTTAAACATAGTAAATTAAAAATGAAATTCTTATAATGATTTTGATGTTATTAATGAGTTTGTTTGTAGTTTGATGTTACTAATGATTTTGATGTTACTAATGATTTTGATGTTTTATTTTTGAGGTTTACTTGGAATGAATTTCACATGATTAATTTTTACTAAAAAGGGTTTTAATAATTTAAAACTAAAACCCAAATATTTATTAAATAGAGGTTTAATAAAAGGTTGAATTGAATTATTAATTATTTTGGAGAGAAATTTGATTTAAAATACGATTAATTCAATGAAGCCGATGCAATGTATATGAACTAAATCATCATAATACTACTAAACTTCACGTATTAAATTGTTACAAATTTAAAAATTATAAGAGTAAATATACGTGTAAGAGTGCTGACTTAATCTACAAGTAATGTAAGAGATTTGATATATAAGGTTAAACTAGAGCACGTCATGTGGATTTGATTTAACGAAACAAAAATTTACATACAAATGCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCGTATAAAAAGAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFPSGVGRFSSFKEKFTSIDNENQTDSCIVESTIEYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA Homology
BLAST of Carg27482 vs. NCBI nr
Match: KAG7010986.1 (S-norcoclaurine synthase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg27482 vs. NCBI nr
Match: XP_023513284.1 (S-norcoclaurine synthase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.9 bits (590), Expect = 3.2e-57 Identity = 123/160 (76.88%), Postives = 126/160 (78.75%), Query Frame = 0
BLAST of Carg27482 vs. NCBI nr
Match: XP_022944468.1 (S-norcoclaurine synthase 2-like [Cucurbita moschata]) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 122/160 (76.25%), Postives = 124/160 (77.50%), Query Frame = 0
BLAST of Carg27482 vs. NCBI nr
Match: XP_022986627.1 (S-norcoclaurine synthase 2-like [Cucurbita maxima]) HSP 1 Score: 200.7 bits (509), Expect = 7.9e-48 Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg27482 vs. NCBI nr
Match: XP_022943440.1 (S-norcoclaurine synthase 1-like [Cucurbita moschata]) HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47 Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy Swiss-Prot
Match: A0A3G5BB24 (Norbelladine synthase OS=Narcissus pseudonarcissus OX=39639 GN=NBS PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-18 Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy Swiss-Prot
Match: Q4QTJ1 (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.5e-09 Identity = 39/154 (25.32%), Postives = 76/154 (49.35%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy Swiss-Prot
Match: Q4QTJ2 (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.9e-08 Identity = 37/154 (24.03%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy Swiss-Prot
Match: A2A1A1 (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 39/127 (30.71%), Postives = 58/127 (45.67%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy TrEMBL
Match: A0A6J1FY33 (S-norcoclaurine synthase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448917 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 7.7e-57 Identity = 122/160 (76.25%), Postives = 124/160 (77.50%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy TrEMBL
Match: A0A6J1J835 (S-norcoclaurine synthase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484311 PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48 Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy TrEMBL
Match: A0A6J1FXT6 (S-norcoclaurine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448206 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.0e-48 Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy TrEMBL
Match: A0A6J1FUB4 (S-norcoclaurine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448205 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.4e-42 Identity = 98/159 (61.64%), Postives = 109/159 (68.55%), Query Frame = 0
BLAST of Carg27482 vs. ExPASy TrEMBL
Match: A0A6J1D5U1 (S-norcoclaurine synthase 2-like OS=Momordica charantia OX=3673 GN=LOC111017212 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 5.2e-37 Identity = 91/152 (59.87%), Postives = 101/152 (66.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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