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Carg27473 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAAAGGAGGAACCCCGCAAAAGAGATATCTCTTGTGTGGAGGTTTCATGAAGCTCTGAGGGACACTTACAATACGGAACTGGTTCCACATCGGAATTATATTTCGCTTTCTGTTTCATGTACCTGTCGAAAGGCTTCTGATTATGGTATCCATTCATGAAAGTGGGACACCTTATCACTACAAACTCCTCTTTTCTTTCTTGAATGGCTCATCTTCCATGAAGGAAAATTCCGATATAATTTCCATGTTGGGAGCTCAAAACACAACATTCTTTTTCAACCGACGCTTTTGTTTTTGGCTCAAAATTCATCAGAACTTCTTTTCGACAGGAGAGCAATGGCAACTGGAGTGGTTTGAAGAAGACACATACAAACTTGAACTGCTATTCCGATACTGGTAAGGAGGTTGGTGATTTGTCACATGTTTTGCTCATCTGAACTTTGGCATTTGCTTCGATGGTACTTCGCAATCTGCTTGGTCGCAACTACATCACTGAGCATTTTACCCAACGGAATTTTGCAATGTGCTTAGGGAACAAAAATATTTTTTGGAACACTGTACCAACTGATAACTTAAATATGATTGCCGGATTCTTCAAGGGGAATTGGAAAATCCCAATGGTTATTGTGAGTTTGGATGGAAATTTTCCAACAACTCACTTGTAGAGATGCAACTACTGTCAACTTGAAAGTGGTCAGTCGTTGTATGGATGATGTACTGAAGGCTTTATTCCCTAAAGGATCGCATGTTGAAAGTTCGCAACCTCGAGTCGAAGCTCCAAAGGGCAAGATGTTGGCCTATATAACAACCAGCAAAATGGTTAGCATCGAAAGTGGGATGCATGGCTATTCCATCCTCTTCTAGCTTGGCTTTGGATGAAAACAAGAGGATGAAATCTAATAATAGTGAAAATGATGGATATTCACCCAAGTCTGTTGTTTTTTGGGGAAAATGTTTGAAGCATTGAGAATGTTGGAGAATTGAAAATGAGGAGGGGCCAAGAGCAATCTGTCAAACGCCTTTCAAAATCAAGGTAACATTAAACGCTCATGTCGTTGTTTTTTACATCAGAATGAAGCATGTAATTGAAAACAACATATCCCTTTTGCATGGCTTATTGTTGCAGAATGGATGTGGAGAGATGGGTTAACATTTTAAGTGCCGCAAGAAGCAAAGCGGAATGAGGAGAATTCGTTTGAAGTAGTGGATGGTTGTTTGTGGAATTAAATTTTACTATCTACTGCTTTAAGCATGAGGTATCAAACTGTTTACATTCTGTTCATAATTCCTTCTTTGCTTCTTTCTATCGTTAATGCTAACATTCTGTTGCCAAACGAATTTGATGCCAGCGATCCAAGGAAAATGTATCTCAAGTGTATCGATATCAAAGAGCGTTCTATTCGAGGGAGGATGGAGTTGGAGCCTATCTTGAGTAAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGATGATCAAGATTTGTGA ATGAAGCAAAGGAGGAACCCCGCAAAAGAGATATCTCTTGTGTGGAGGTTTCATGAAGCTCTGAGGGACACTTACAATACGGAACTGGTTCCACATCGGAATTATATTTCGCTTTCTGTTTCATGTACCTGTCGAAAGGCTTCTGATTATGGAGAGCAATGGCAACTGGAGTGGTTTGAAGAAGACACATACAAACTTGAACTGCTATTCCGATACTGCATTGAGAATGTTGGAGAATTGAAAATGAGGAGGGGCCAAGAGCAATCTGTCAAACGCCTTTCAAAATCAAGCGATCCAAGGAAAATGTATCTCAAGTGTATCGATATCAAAGAGCGTTCTATTCGAGGGAGGATGGAGTTGGAGCCTATCTTGAGTAAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGATGATCAAGATTTGTGA ATGAAGCAAAGGAGGAACCCCGCAAAAGAGATATCTCTTGTGTGGAGGTTTCATGAAGCTCTGAGGGACACTTACAATACGGAACTGGTTCCACATCGGAATTATATTTCGCTTTCTGTTTCATGTACCTGTCGAAAGGCTTCTGATTATGGAGAGCAATGGCAACTGGAGTGGTTTGAAGAAGACACATACAAACTTGAACTGCTATTCCGATACTGCATTGAGAATGTTGGAGAATTGAAAATGAGGAGGGGCCAAGAGCAATCTGTCAAACGCCTTTCAAAATCAAGCGATCCAAGGAAAATGTATCTCAAGTGTATCGATATCAAAGAGCGTTCTATTCGAGGGAGGATGGAGTTGGAGCCTATCTTGAGTAAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGATGATCAAGATTTGTGA MKQRRNPAKEISLVWRFHEALRDTYNTELVPHRNYISLSVSCTCRKASDYGEQWQLEWFEEDTYKLELLFRYCIENVGELKMRRGQEQSVKRLSKSSDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQDL Homology
BLAST of Carg27473 vs. NCBI nr
Match: KAG7030538.1 (hypothetical protein SDJN02_04575, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 304.7 bits (779), Expect = 4.5e-79 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of Carg27473 vs. NCBI nr
Match: XP_023517638.1 (uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09 Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Carg27473 vs. NCBI nr
Match: XP_023517638.1 (uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
HSP 2 Score: 69.7 bits (169), Expect = 2.4e-08 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Carg27473 vs. NCBI nr
Match: KAG7030546.1 (TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
HSP 2 Score: 69.7 bits (169), Expect = 2.4e-08 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Carg27473 vs. NCBI nr
Match: XP_022942070.1 (uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata] >XP_022942071.1 uncharacterized protein LOC111447259 isoform X2 [Cucurbita moschata]) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
HSP 2 Score: 65.1 bits (157), Expect = 6.0e-07 Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Carg27473 vs. ExPASy TrEMBL
Match: A0A6J1FVI8 (uncharacterized protein LOC111447259 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447259 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Carg27473 vs. ExPASy TrEMBL
Match: A0A6J1FVI8 (uncharacterized protein LOC111447259 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447259 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
HSP 2 Score: 55.5 bits (132), Expect = 2.3e-04 Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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