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Carg27442 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATCAAAAAAGCTTGCCCAGAGTGTTCATTGGGAGGAAGCAAATCGGTGGCGCTGAAGAAATTCGCAGACTACACGAAGATGGGCAGCTTGAGAAACTGCTTGAATGCTGCGAGAAGCTTGAAAATGACGATGGGGGAGTCTGTGAGGCATGTGGGGACATTAGATTTGTGCCATGTGAGACATGTTCTGGAAGCTGTAAAGTGTTTTATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGATGGATATGGCTTCCAGAGGTGTACTGATTGCAATGAAAATGGGCTTGTGAGGTGCCCCATCTGCTGCCATTAA ATGGAAGATCAAAAAAGCTTGCCCAGAGTGTTCATTGGGAGGAAGCAAATCGGTGGCGCTGAAGAAATTCGCAGACTACACGAAGATGGGCAGCTTGAGAAACTGCTTGAATGCTGCGAGAAGCTTGAAAATGACGATGGGGGAGTCTGTGAGGCATGTGGGGACATTAGATTTGTGCCATGTGAGACATGTTCTGGAAGCTGTAAAGTGTTTTATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGATGGATATGGCTTCCAGAGGTGTACTGATTGCAATGAAAATGGGCTTGTGAGGTGCCCCATCTGCTGCCATTAA ATGGAAGATCAAAAAAGCTTGCCCAGAGTGTTCATTGGGAGGAAGCAAATCGGTGGCGCTGAAGAAATTCGCAGACTACACGAAGATGGGCAGCTTGAGAAACTGCTTGAATGCTGCGAGAAGCTTGAAAATGACGATGGGGGAGTCTGTGAGGCATGTGGGGACATTAGATTTGTGCCATGTGAGACATGTTCTGGAAGCTGTAAAGTGTTTTATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGATGGATATGGCTTCCAGAGGTGTACTGATTGCAATGAAAATGGGCTTGTGAGGTGCCCCATCTGCTGCCATTAA MEDQKSLPRVFIGRKQIGGAEEIRRLHEDGQLEKLLECCEKLENDDGGVCEACGDIRFVPCETCSGSCKVFYDEEEEEEEEEEEAEDGYGFQRCTDCNENGLVRCPICCH Homology
BLAST of Carg27442 vs. NCBI nr
Match: KAG7030600.1 (hypothetical protein SDJN02_04637, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Carg27442 vs. NCBI nr
Match: KAG6580974.1 (hypothetical protein SDJN03_20976, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231.1 bits (588), Expect = 4.6e-57 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg27442 vs. NCBI nr
Match: KAG7017712.1 (hypothetical protein SDJN02_19578, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.1 bits (588), Expect = 4.6e-57 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg27442 vs. NCBI nr
Match: XP_023528460.1 (uncharacterized protein At3g28850-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg27442 vs. NCBI nr
Match: XP_023522010.1 (uncharacterized protein At3g28850-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56 Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy Swiss-Prot
Match: Q9LH89 (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana OX=3702 GN=At3g28850 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.6e-36 Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy Swiss-Prot
Match: Q9FLE8 (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31 Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy Swiss-Prot
Match: Q50H32 (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Grxcr1 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy Swiss-Prot
Match: A8MXD5 (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens OX=9606 GN=GRXCR1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy TrEMBL
Match: A0A6J1J6V9 (uncharacterized protein At3g28850-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482301 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 4.6e-55 Identity = 107/114 (93.86%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy TrEMBL
Match: A0A6J1F1Y2 (uncharacterized protein At3g28850-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441418 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54 Identity = 105/110 (95.45%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy TrEMBL
Match: A0A6J1J3C4 (uncharacterized protein At3g28850-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482301 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 2.8e-52 Identity = 102/109 (93.58%), Postives = 102/109 (93.58%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy TrEMBL
Match: A0A5A7UJT1 (Glutaredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001300 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50 Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of Carg27442 vs. ExPASy TrEMBL
Match: A0A1S3B816 (uncharacterized protein At3g28850-like OS=Cucumis melo OX=3656 GN=LOC103487012 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50 Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of Carg27442 vs. TAIR 10
Match: AT3G28850.1 (Glutaredoxin family protein ) HSP 1 Score: 152.1 bits (383), Expect = 2.5e-37 Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of Carg27442 vs. TAIR 10
Match: AT5G39865.1 (Glutaredoxin family protein ) HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32 Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg27442 vs. TAIR 10
Match: AT3G57070.1 (Glutaredoxin family protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-20 Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Carg27442 vs. TAIR 10
Match: AT2G41330.1 (Glutaredoxin family protein ) HSP 1 Score: 95.5 bits (236), Expect = 2.8e-20 Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Carg27442 vs. TAIR 10
Match: AT5G13810.1 (Glutaredoxin family protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19 Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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