Carg27324 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTTCTTCCGTCCAAAACTGAATTCGAAGAGCGCCTACTCAACGAAGGAACTGAAAGAGATCTTCCACCAGATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTCGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGA ATGTCGTTCTTCCGTCCAAAACTGAATTCGAAGAGCGCCTACTCAACGAAGGAACTGAAAGAGATCTTCCACCAGATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTCGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGA ATGTCGTTCTTCCGTCCAAAACTGAATTCGAAGAGCGCCTACTCAACGAAGGAACTGAAAGAGATCTTCCACCAGATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTCGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGA MSFFRPKLNSKSAYSTKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV Homology
BLAST of Carg27324 vs. NCBI nr
Match: KAG7024250.1 (hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.7 bits (465), Expect = 6.8e-43 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg27324 vs. NCBI nr
Match: KGN55187.1 (hypothetical protein Csa_012728 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32 Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Carg27324 vs. NCBI nr
Match: KAA0064378.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa] >TYK20209.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 143.3 bits (360), Expect = 1.0e-30 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Carg27324 vs. NCBI nr
Match: KAG7037807.1 (hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 63/80 (78.75%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Carg27324 vs. NCBI nr
Match: KAG6608479.1 (hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 63/80 (78.75%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Carg27324 vs. ExPASy TrEMBL
Match: A0A0A0L3J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32 Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Carg27324 vs. ExPASy TrEMBL
Match: A0A5D3D9N2 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003460 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.9e-31 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Carg27324 vs. ExPASy TrEMBL
Match: W9S022 (Putative calcium-binding protein CML10 OS=Morus notabilis OX=981085 GN=L484_000100 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Carg27324 vs. ExPASy TrEMBL
Match: A0A6A1UYX3 (Putative calcium-binding protein CML10 OS=Morella rubra OX=262757 GN=CJ030_MR0G017070 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Carg27324 vs. ExPASy TrEMBL
Match: A0A5C7H7G7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021561 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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