Carg27293 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg27293
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionribonuclease 3-like protein 2
LocationCarg_Chr16: 6661412 .. 6664169 (+)
RNA-Seq ExpressionCarg27293
SyntenyCarg27293
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTAGTTTATAAAATTAAAATAAAAGCAAGGGCCTCAATACTTCATGCCTCCCATTCTCCCAATCGGTGGTTTCAGTCCCACAGAAACGTGAACGTCGGAATCGGACTCTCCACTCTCCATTCGCCGCCACCGCCGCCGCCTTCGGAGTCTAAGGTCTGACTTATTGCTCTTCGCTGCAGGAAGATGGAATCCTCCGTGTTAGCGGTTGAACTCATTGTTTCCTATAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTCACCCACTCCTCTTACGTTGAATCTGCCTCCTATCAGCGCCTTGAGTTCATCGGCGACTCTGCTATTGGCCTCGCTTTTACCAATTACTTTTTCCTTGCGTATCCCGACCTCCAGCAGGGCCAACTCTCTTTACTTAGGGCTGCTAACATAAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGTCATGGCTTGTATCACTATGTTAGGCGCAAGGCTGTCGCTCTCGATGATAAGGTTTTCGATTTCACCTTCGATCTCTGTTTCTTTCCTTTTTGTTTGTGACTAGCAGCCTTTGATTTTTCCCTGATTTAACTCTATTTAGGTTTTTTTTTTTTTAATTGTCTAGGTTAGAGAGTTCGTCGATTCTGTCGCCCTAGAAAACAACTCAGTTCCGTATGGTGGGTTAATGAAGGCTCCTAAAGTTCTTGCTGACATTGTAGAATCTGTGGCTGGTGCTATCTATGTAGACGTTAATTTTGATCTTCAAAGACTGTGGGTGGTAGGTTCATGGATATATTTTTGAAGTATAATTACTATTTCATTACTAGTCGAGCACCGATTAGTTTTTGTTTTTGATCTTTTGTAGATAATTAGGGGTTTGCTAGAGCCCATCTATACTCCTGAGGATCTAGAGGTAGAACCCCAACCTGTGACTGTTCTCTTTGAAGTTTGCCAAAAAAATGGGAAGCAAGTTGACATCAAAAATTGGAGTAACGGTTCCAAGACTGTTTCTAGTGTCTTTGTTGATGGTATTTTTGTTGCATCGGGTTCTTCAACACATAAAGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCGCCAAATTGTCCAAAACTATGGATATCAATATTCGAACGGCTGTAACTATTGATGGTATTGATGAATCTTTTGAAATCGAAGGCGCGAAGCAGAAATTACATGATTTTTGTTGCAAGAAAAAGTGGCCAAAACCGAATTACAGGTATAATATTTTAGATGTTGCATAACTTCCATTACTCAGACTCTGAATTAGGAGGCAGTTTATCTTTTGTAATTGTAGATTTTACATTTACAAGCCTGCACTCCAAGTTATATACTTGCTTATTGAATTCTCAAGTAGTTTATGATGAAATGCAATTTTTTTAAATCTTCTTGTCTTATATCTTCATCAAACTACTTTCATTCTCTCTGTACATGGAAATTTTATTTCTTCTCAAATTATAACATTCTTTTTAGTTGTCATTGCTCATTAGCTGATTTGTTATTACATCTATACACTGATTTGTTTAAAATATTTTTCTCACATTCTATTGAATCTCCTCCTCTGTGCATTATGTTGGTCGGATGAAAGTCCTACATATGATAATTTAGGGAACGATCATGGGTTTATAATCAAAGAATACTATCTCCATTGACATACCTTTTGGGGAAGCCCAAAGCTCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCTGTTCAACTAACATGGTATCAGAGCATCTAACACATTATAGTTACCAATTAGATGTATTAAATTGTATGAGTAAAGCTAAAGACCTGTTGTGAGTTTGATGTGAATGACAGTTTTGGATTGTTGTTTGTATTATCTCTAGTCGATTTGTGGGTAATAAATAAAAACAGAGCTAACAGAGAGATCATTCACTTACCAACAGAGCTAACAGAGAGATCATTCACTTACCATATAGTTCTTTGACCATCTTTTTCCCTTCCTCGTCCTCCTTTTTCGGATATGTTGTAGCACTAAATAATACTATATGGGTTTTTTTTCACCTGCAGTACTGAGAAGGATTTTGGACCTTCACATGATAAGAGATTTACTTGCTCCGTTAAAATTTCCTCTCCTTCTGGGATGCTGTATATGGTGGGAGATGAGAAGTCAAGAGTAAAGGATTCAGAGAACTCTGCGGCCTCTATGATGATTCGTGCTTTACAGGAGAAAGGGTATCTCTAATGCTTTATTTATTCAATTGGACAGAATCTAGCATATTTCATGTCCAACTATTGGATCAGCTAGGAAAAATTCGTTTTCATCTTTATTTTTTTTCTTTCTTTTATACTTATTTATACAGGTAGATATCTTGTGAATCCTTAGTCTAGTTGCCTTTCTGAGTAAAACTTGTATTAAATTCAGTGTTCATTCGTCGCAATGTAAAATTCAAGCCAACCAGTTTAGGTTGTCATGATGCGGTGTAAACCGATTGATATCGGGTCTGCTTGGTGCATGTTTGGGAGCTATTTTAGAATAGGGAAAGTAGAGTAGATGGATGGGGATGGTCGTAATTTATAGCCAAATTTGGAAGATGAATTAGTTTTACATAGTACAAGGCCTTCCATGATTTAAAAGATTAATTTGTTAACAGTTTGGAACTTCTGATTTTTAACCATCAACTTTGAATTTTTGAATCCAATCATATGCATATGATCTGTGGACCCTTTCCATTTGAAGTTTAGATTTTGTTTCA

mRNA sequence

TATTAGTTTATAAAATTAAAATAAAAGCAAGGGCCTCAATACTTCATGCCTCCCATTCTCCCAATCGGTGGTTTCAGTCCCACAGAAACGTGAACGTCGGAATCGGACTCTCCACTCTCCATTCGCCGCCACCGCCGCCGCCTTCGGAGTCTAAGGTCTGACTTATTGCTCTTCGCTGCAGGAAGATGGAATCCTCCGTGTTAGCGGTTGAACTCATTGTTTCCTATAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTCACCCACTCCTCTTACGTTGAATCTGCCTCCTATCAGCGCCTTGAGTTCATCGGCGACTCTGCTATTGGCCTCGCTTTTACCAATTACTTTTTCCTTGCGTATCCCGACCTCCAGCAGGGCCAACTCTCTTTACTTAGGGCTGCTAACATAAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGTCATGGCTTGTATCACTATGTTAGGCGCAAGGCTGTCGCTCTCGATGATAAGGTTAGAGAGTTCGTCGATTCTGTCGCCCTAGAAAACAACTCAGTTCCGTATGGTGGGTTAATGAAGGCTCCTAAAGTTCTTGCTGACATTGTAGAATCTGTGGCTGGTGCTATCTATGTAGACGTTAATTTTGATCTTCAAAGACTGTGGGTGATAATTAGGGGTTTGCTAGAGCCCATCTATACTCCTGAGGATCTAGAGGTAGAACCCCAACCTGTGACTGTTCTCTTTGAAGTTTGCCAAAAAAATGGGAAGCAAGTTGACATCAAAAATTGGAGTAACGGTTCCAAGACTGTTTCTAGTGTCTTTGTTGATGGTATTTTTGTTGCATCGGGTTCTTCAACACATAAAGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCGCCAAATTGTCCAAAACTATGGATATCAATATTCGAACGGCTGTAACTATTGATGGTATTGATGAATCTTTTGAAATCGAAGGCGCGAAGCAGAAATTACATGATTTTTGTTGCAAGAAAAAGTGGCCAAAACCGAATTACAGTACTGAGAAGGATTTTGGACCTTCACATGATAAGAGATTTACTTGCTCCGTTAAAATTTCCTCTCCTTCTGGGATGCTGTATATGGTGGGAGATGAGAAGTCAAGAGTAAAGGATTCAGAGAACTCTGCGGCCTCTATGATGATTCGTGCTTTACAGGAGAAAGGGTATCTCTAATGCTTTATTTATTCAATTGGACAGAATCTAGCATATTTCATGTCCAACTATTGGATCAGCTAGGAAAAATTCGTTTTCATCTTTATTTTTTTTCTTTCTTTTATACTTATTTATACAGGTAGATATCTTGTGAATCCTTAGTCTAGTTGCCTTTCTGAGTAAAACTTGTATTAAATTCAGTGTTCATTCGTCGCAATGTAAAATTCAAGCCAACCAGTTTAGGTTGTCATGATGCGGTGTAAACCGATTGATATCGGGTCTGCTTGGTGCATGTTTGGGAGCTATTTTAGAATAGGGAAAGTAGAGTAGATGGATGGGGATGGTCGTAATTTATAGCCAAATTTGGAAGATGAATTAGTTTTACATAGTACAAGGCCTTCCATGATTTAAAAGATTAATTTGTTAACAGTTTGGAACTTCTGATTTTTAACCATCAACTTTGAATTTTTGAATCCAATCATATGCATATGATCTGTGGACCCTTTCCATTTGAAGTTTAGATTTTGTTTCA

Coding sequence (CDS)

ATGGAATCCTCCGTGTTAGCGGTTGAACTCATTGTTTCCTATAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTCACCCACTCCTCTTACGTTGAATCTGCCTCCTATCAGCGCCTTGAGTTCATCGGCGACTCTGCTATTGGCCTCGCTTTTACCAATTACTTTTTCCTTGCGTATCCCGACCTCCAGCAGGGCCAACTCTCTTTACTTAGGGCTGCTAACATAAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGTCATGGCTTGTATCACTATGTTAGGCGCAAGGCTGTCGCTCTCGATGATAAGGTTAGAGAGTTCGTCGATTCTGTCGCCCTAGAAAACAACTCAGTTCCGTATGGTGGGTTAATGAAGGCTCCTAAAGTTCTTGCTGACATTGTAGAATCTGTGGCTGGTGCTATCTATGTAGACGTTAATTTTGATCTTCAAAGACTGTGGGTGATAATTAGGGGTTTGCTAGAGCCCATCTATACTCCTGAGGATCTAGAGGTAGAACCCCAACCTGTGACTGTTCTCTTTGAAGTTTGCCAAAAAAATGGGAAGCAAGTTGACATCAAAAATTGGAGTAACGGTTCCAAGACTGTTTCTAGTGTCTTTGTTGATGGTATTTTTGTTGCATCGGGTTCTTCAACACATAAAGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCGCCAAATTGTCCAAAACTATGGATATCAATATTCGAACGGCTGTAACTATTGATGGTATTGATGAATCTTTTGAAATCGAAGGCGCGAAGCAGAAATTACATGATTTTTGTTGCAAGAAAAAGTGGCCAAAACCGAATTACAGTACTGAGAAGGATTTTGGACCTTCACATGATAAGAGATTTACTTGCTCCGTTAAAATTTCCTCTCCTTCTGGGATGCTGTATATGGTGGGAGATGAGAAGTCAAGAGTAAAGGATTCAGAGAACTCTGCGGCCTCTATGATGATTCGTGCTTTACAGGAGAAAGGGTATCTCTAA

Protein sequence

MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAYPDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTMDINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKISSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Homology
[Close]
BLAST of Carg27293 vs. NCBI nr
Match: KAG6577457.1 (Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015528.1 Ribonuclease 3-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 661.0 bits (1704), Expect = 5.5e-186
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. NCBI nr
Match: XP_023551903.1 (ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 656.8 bits (1693), Expect = 1.0e-184
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S+ SGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 STSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. NCBI nr
Match: XP_022965096.1 (ribonuclease 3-like protein 2 [Cucurbita maxima])

HSP 1 Score: 654.8 bits (1688), Expect = 4.0e-184
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDG FVASGSSTHKEIARLNAAREALAKLSKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S+ SGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 STSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. NCBI nr
Match: XP_022932283.1 (ribonuclease 3-like protein 2 [Cucurbita moschata])

HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-183
Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS+P
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSIP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHK IARLNAAREALAK+SKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKVIARLNAAREALAKMSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIR AVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRAAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S PSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 SPPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. NCBI nr
Match: XP_038903239.1 (ribonuclease 3-like protein 2 [Benincasa hispida])

HSP 1 Score: 553.1 bits (1424), Expect = 1.6e-153
Identity = 281/338 (83.14%), Postives = 303/338 (89.64%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSV A E I+SYNFKNKKLLEEALTHSSY +SASY+RLEFIGDSAIGLA +NYFFLA+
Sbjct: 1   MESSVRAAERILSYNFKNKKLLEEALTHSSYPDSASYERLEFIGDSAIGLAISNYFFLAF 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDL QGQLSLLRAANISTEKLARVAVR GLY+YVRR A ALDDKVREFVDSVALENNSV 
Sbjct: 61  PDLHQGQLSLLRAANISTEKLARVAVRLGLYNYVRRNAAALDDKVREFVDSVALENNSVA 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGL+KAPKVLADIVESVAGA+Y+DVNFDLQRLWVIIRGLLEPIYT E L+VEPQPVT+L
Sbjct: 121 YGGLVKAPKVLADIVESVAGAVYIDVNFDLQRLWVIIRGLLEPIYTLESLQVEPQPVTLL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNW NG   V SV+VDG FVAS SS  KEIA+L+AAREAL +LS  M
Sbjct: 181 FEVCQKNGKQVDIKNWKNGPNNVVSVYVDGSFVASSSSMQKEIAKLSAAREALVELSNHM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           D N +T VTIDGIDESFEIEGAK KLHDFCCKKKWPKP YSTEKD GPSH+KRF CSV I
Sbjct: 241 DTNTKTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPTYSTEKDLGPSHEKRFVCSVII 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S+PS  LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 STPSDTLYMLGDEKSRVKDAENSAASLMIRALQERNYL 338

[Close]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match: Q9LTQ0 (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-98
Identity = 186/337 (55.19%), Postives = 253/337 (75.07%), Query Frame = 0 

Query: 4   SVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAYPDL 63
           S+ AVE I++Y F NK LL+EA+TH+S  +  SY+RLEFIGDSAIGLA +NY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  QQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENN-SVPYG 123
           +   LSLLRAAN+STEKLARV++ HGLY ++RR A +LD+KV+EF ++V  E++ SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLFE 183
           GL+KAPKVLAD+ ES+AGA+YVDVNFDLQRLWVI RGLLEPI T +DL+ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTMDI 243
           +C K+ K++DIKNW +G+ +++ +++D   +ASG + +K+IARL AA+EAL KLS+   +
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 NIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKIS- 303
                + ID      ++  AK KL++ C KKKWPKP YS E+D      KRF CS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 SPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           +    LYM GDE+S++K +E+S+A  MIRAL++  YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match: Q6ATG6 (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 9.8e-69
Identity = 146/277 (52.71%), Postives = 188/277 (67.87%), Query Frame = 0 

Query: 8   VELIVSYNFKNKKLLEEALTHSSYVESA-SYQRLEFIGDSAIGLAFTNYFFLAYPDLQQG 67
           VE ++ Y F++ +LLEEALTH S+ + A SYQRLEF+GDSA+GLAF+N+ +L  P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 68  QLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALEN----NSVPYG 127
            LS LRAANISTEKLARVAVRH LY  +RR    LD  V +F+++V  E     ++VPYG
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 128 G-LMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLF 187
           G ++KAPKVLADIVE++A A+YVD  FDL++LW + R L EPI T E   ++ QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLH 219

Query: 188 EVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTMD 247
           E+CQK+GK    K W  G  TV +VFV G  V  GSS  K IA+LNAAR+A  KL+    
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKK 279

Query: 248 INIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKP 279
             + T V     DE  E+   KQKL++ C ++ WPKP
Sbjct: 280 QVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

[Close]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match: Q9FKF0 (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 9.2e-59
Identity = 139/384 (36.20%), Postives = 214/384 (55.73%), Query Frame = 0 

Query: 3   SSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAYPD 62
           +SV AVE I++Y+F NK LL+EA+T     +S  + RLEF GDS + +AFTNY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQ----KSPLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYG 122
           L+  +L  LR AN+S EK AR+AV H L+H++  +  +L  KV+ F ++V  E++ VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQ-PVTVLF 182
           GL+KAPK+LAD +ES+A  +++DVN+D++RLW I R LLEPIYTP+DL ++P+ P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 EVCQKNGKQ-----------------------VDIKNWSNGSKTVSSVFVDGIFVASGSS 242
            +  K+G +                       VD+++    S  + S  +  +   S +S
Sbjct: 182 RLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENS 241

Query: 243 THKEIARLNA-------------AREALAKLSKTMDINIRTA--------------VTID 302
              E+++                 +  L ++  T  + I+T               + +D
Sbjct: 242 LTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEMTTKQMVVD 301

Query: 303 GIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKISSPS--GMLYM 334
                 E    + +L + C K KWP+P +S +++ GP ++ +F CSVKI  P+  G  +M
Sbjct: 302 KDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFHM 361

[Close]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-51
Identity = 131/349 (37.54%), Postives = 196/349 (56.16%), Query Frame = 0 

Query: 6    LAVELIVSYNFKNKKLLEEALTHSSYVES--ASYQRLEFIGDSAIGLAFTNYFFLAYPDL 65
            + +E  + Y FK K LL EA+TH+S   S  + YQRLEF+GD+ +    T + F  Y  L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   QQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYG- 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  + AL+ ++REFV  V  E++   +  
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  ---GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 185
               G  KAPKVL DIVES+AGAI++D   D    W + + LL+P+ TPE L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKL--- 245
            L E CQ+  + ++ K   +G+     VF+DG+ V    +  K++A+  AAR ALA L   
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  ----SKTMDINIRTAVTIDGIDESFEIEG-----AKQKLHDFCCKKKWPKPNYSTEKDFG 305
                SK   IN   A    G +E+   +       +Q L+D C +K WP P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHDKRFTCSVKI-SSPSGML-YMVGDEKSRVKDSENSAASMMIRALQE 335
            P+H KRFT  V++ +S  G     +G+    VK +++SAA +++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.9e-48
Identity = 123/330 (37.27%), Postives = 189/330 (57.27%), Query Frame = 0 

Query: 11   IVSYNFKNKKLLEEALTHSSYVES--ASYQRLEFIGDSAIGLAFTNYFFLAYPDLQQGQL 70
            ++   F+NK LL EA+TH+S   S  + YQRLEF+GD+ +    T + F  Y DL  G+L
Sbjct: 1544 VLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRL 1603

Query: 71   SLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSV---ALENNSVPYG-GL 130
            + LRAA ++ E  ARVAV+H L+ ++R  + AL+ ++REFV  V    L+     +G G 
Sbjct: 1604 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGLGD 1663

Query: 131  MKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLFEVC 190
             KAPKVL DIVES+AGAI++D  +D   +W + + LL P+ TPE L +   PV  L E C
Sbjct: 1664 CKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQERC 1723

Query: 191  QKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTMDINI 250
            Q+  + ++ K    G+     VFVDG+ +    +  K++A+  AAR AL  L K  +   
Sbjct: 1724 QQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVL-KEKETAT 1783

Query: 251  RTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI-SSP 310
            +     DG  ++      +Q L+D C +++WP P Y    + GP+H KRF  SV++ +S 
Sbjct: 1784 KKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSD 1843

Query: 311  SGML-YMVGDEKSRVKDSENSAASMMIRAL 333
             G     +G+    VK +++SAA +++  L
Sbjct: 1844 RGWTDECIGEPMPSVKKAKDSAAVLLLELL 1870

[Close]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match: A0A6J1HKS4 (ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 1.9e-184
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDG FVASGSSTHKEIARLNAAREALAKLSKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S+ SGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 STSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match: A0A6J1F189 (ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 5.6e-184
Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS+P
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSIP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHK IARLNAAREALAK+SKTM
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKVIARLNAAREALAKMSKTM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           DINIR AVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI
Sbjct: 241 DINIRAAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           S PSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL
Sbjct: 301 SPPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match: A0A5D3DKE4 (Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00580 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.4e-149
Identity = 271/338 (80.18%), Postives = 301/338 (89.05%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           M SSV+AVE I+SY FKNKKLLEEALTH SY +SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           P+L QGQLSLLRAAN+STEKLARVAV HGLY+YVRR A  +D KV+EFVDSVALE +SVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT E+L+VEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           F+VCQ+NGKQVDIKNW NGSK ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +M
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           D  I+T VTI+GIDESFEIEGAKQKLHDFCC+KKW KP YS EK  GPSH +RF CSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
            +  G  Y+VGDEKSRVKD+ENSAAS+MIRALQE+ +L
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match: A0A1S3BM12 (ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.4e-149
Identity = 271/338 (80.18%), Postives = 301/338 (89.05%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           M SSV+AVE I+SY FKNKKLLEEALTH SY +SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           P+L QGQLSLLRAAN+STEKLARVAV HGLY+YVRR A  +D KV+EFVDSVALE +SVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGGLMKAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT E+L+VEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           F+VCQ+NGKQVDIKNW NGSK ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +M
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           D  I+T VTI+GIDESFEIEGAKQKLHDFCC+KKW KP YS EK  GPSH +RF CSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
            +  G  Y+VGDEKSRVKD+ENSAAS+MIRALQE+ +L
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match: A0A0A0L1E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.0e-145
Identity = 265/338 (78.40%), Postives = 299/338 (88.46%), Query Frame = 0 

Query: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60
           MESSV+A+E I+SYNF NK LLEEALTH SY  SASY+RLEF+GDSAIGLA TNYFFLA 
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120
           P L QG LSLLRAAN+STEKLARVAV HGLY+YVRR + A+DDKV+EFVDSVALE +SVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180
           YGG+MKAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT E+L+VEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240
           F+VCQ+NGKQVDIK+W NGS +++SV VDG FVASGSS  KEIARLNAAREAL KLS +M
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300
           D  I+T VTIDGIDESFEIEGAKQKLHD C K+KW KPNYS EKD GPSH++ F CSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 SSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           ++  G  Y+VGDEKSRVKD+ENSAAS+MIRALQE+ +L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Carg27293 vs. TAIR 10
Match: AT3G20420.1 (RNAse THREE-like protein 2 )

HSP 1 Score: 361.3 bits (926), Expect = 8.4e-100
Identity = 186/337 (55.19%), Postives = 253/337 (75.07%), Query Frame = 0 

Query: 4   SVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAYPDL 63
           S+ AVE I++Y F NK LL+EA+TH+S  +  SY+RLEFIGDSAIGLA +NY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  QQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENN-SVPYG 123
           +   LSLLRAAN+STEKLARV++ HGLY ++RR A +LD+KV+EF ++V  E++ SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLFE 183
           GL+KAPKVLAD+ ES+AGA+YVDVNFDLQRLWVI RGLLEPI T +DL+ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTMDI 243
           +C K+ K++DIKNW +G+ +++ +++D   +ASG + +K+IARL AA+EAL KLS+   +
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 NIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKIS- 303
                + ID      ++  AK KL++ C KKKWPKP YS E+D      KRF CS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 SPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 339
           +    LYM GDE+S++K +E+S+A  MIRAL++  YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of Carg27293 vs. TAIR 10
Match: AT5G45150.1 (RNAse THREE-like protein 3 )

HSP 1 Score: 228.8 bits (582), Expect = 6.5e-60
Identity = 139/384 (36.20%), Postives = 214/384 (55.73%), Query Frame = 0 

Query: 3   SSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAYPD 62
           +SV AVE I++Y+F NK LL+EA+T     +S  + RLEF GDS + +AFTNY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQ----KSPLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYG 122
           L+  +L  LR AN+S EK AR+AV H L+H++  +  +L  KV+ F ++V  E++ VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQ-PVTVLF 182
           GL+KAPK+LAD +ES+A  +++DVN+D++RLW I R LLEPIYTP+DL ++P+ P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 EVCQKNGKQ-----------------------VDIKNWSNGSKTVSSVFVDGIFVASGSS 242
            +  K+G +                       VD+++    S  + S  +  +   S +S
Sbjct: 182 RLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENS 241

Query: 243 THKEIARLNA-------------AREALAKLSKTMDINIRTA--------------VTID 302
              E+++                 +  L ++  T  + I+T               + +D
Sbjct: 242 LTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEMTTKQMVVD 301

Query: 303 GIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKISSPS--GMLYM 334
                 E    + +L + C K KWP+P +S +++ GP ++ +F CSVKI  P+  G  +M
Sbjct: 302 KDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFHM 361

[Close]
BLAST of Carg27293 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-52
Identity = 131/349 (37.54%), Postives = 196/349 (56.16%), Query Frame = 0 

Query: 6    LAVELIVSYNFKNKKLLEEALTHSSYVES--ASYQRLEFIGDSAIGLAFTNYFFLAYPDL 65
            + +E  + Y FK K LL EA+TH+S   S  + YQRLEF+GD+ +    T + F  Y  L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   QQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYG- 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  + AL+ ++REFV  V  E++   +  
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  ---GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 185
               G  KAPKVL DIVES+AGAI++D   D    W + + LL+P+ TPE L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKL--- 245
            L E CQ+  + ++ K   +G+     VF+DG+ V    +  K++A+  AAR ALA L   
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  ----SKTMDINIRTAVTIDGIDESFEIEG-----AKQKLHDFCCKKKWPKPNYSTEKDFG 305
                SK   IN   A    G +E+   +       +Q L+D C +K WP P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHDKRFTCSVKI-SSPSGML-YMVGDEKSRVKDSENSAASMMIRALQE 335
            P+H KRFT  V++ +S  G     +G+    VK +++SAA +++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]
BLAST of Carg27293 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-52
Identity = 131/349 (37.54%), Postives = 196/349 (56.16%), Query Frame = 0 

Query: 6    LAVELIVSYNFKNKKLLEEALTHSSYVES--ASYQRLEFIGDSAIGLAFTNYFFLAYPDL 65
            + +E  + Y FK K LL EA+TH+S   S  + YQRLEF+GD+ +    T + F  Y  L
Sbjct: 1561 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1620

Query: 66   QQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYG- 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  + AL+ ++REFV  V  E++   +  
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680

Query: 126  ---GLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 185
               G  KAPKVL DIVES+AGAI++D   D    W + + LL+P+ TPE L +   PV  
Sbjct: 1681 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1740

Query: 186  LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKL--- 245
            L E CQ+  + ++ K   +G+     VF+DG+ V    +  K++A+  AAR ALA L   
Sbjct: 1741 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1800

Query: 246  ----SKTMDINIRTAVTIDGIDESFEIEG-----AKQKLHDFCCKKKWPKPNYSTEKDFG 305
                SK   IN   A    G +E+   +       +Q L+D C +K WP P+Y   K+ G
Sbjct: 1801 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1860

Query: 306  PSHDKRFTCSVKI-SSPSGML-YMVGDEKSRVKDSENSAASMMIRALQE 335
            P+H KRFT  V++ +S  G     +G+    VK +++SAA +++  L +
Sbjct: 1861 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]
BLAST of Carg27293 vs. TAIR 10
Match: AT4G15417.1 (RNAse II-like 1 )

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-36
Identity = 94/234 (40.17%), Postives = 137/234 (58.55%), Query Frame = 0 

Query: 7   AVELIVSYNFKNKKLLEEALTHSSYVE--SASYQRLEFIGDSAIGLAFTNYFFLAYPDLQ 66
           ++E I++Y FK+K LL +A T +SYV+  S SY+ LE +GDS + +     F   YP   
Sbjct: 31  SLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEA 90

Query: 67  QGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVPYGGL 126
            G L+ LRA N+ TEKLARVAV H LY Y+R K   L++++ EFV+  A+E   +   GL
Sbjct: 91  PGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVE--AMEKYPLHSNGL 150

Query: 127 MKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVLFEVC 186
           +K PKVLADIVES  GAI++D N   + +W +I+ LLEPI   +  +++  P+T L E+C
Sbjct: 151 LKVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLD--KMKSHPMTELNEMC 210

Query: 187 QKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSK 239
           QK   ++  K+    ++T      D           KE AR  AA+ A+   +K
Sbjct: 211 QKRNLKLTSKDTWEENQTYCFHIEDKFVGCGHHPVKKETARNFAAKNAIDNFAK 259

The following BLAST results are available for this feature:
BLAST of Carg27293 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577457.15.5e-186100.00Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >... [more]
XP_023551903.11.0e-18499.41ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022965096.14.0e-18499.11ribonuclease 3-like protein 2 [Cucurbita maxima][more]
XP_022932283.11.2e-18398.52ribonuclease 3-like protein 2 [Cucurbita moschata][more]
XP_038903239.11.6e-15383.14ribonuclease 3-like protein 2 [Benincasa hispida][more]
BLAST of Carg27293 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LTQ01.2e-9855.19Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1[more]
Q6ATG69.8e-6952.71Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0... [more]
Q9FKF09.2e-5936.20Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1[more]
Q9SP321.4e-5137.54Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV... [more]
Q8LMR21.9e-4837.27Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... [more]
BLAST of Carg27293 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HKS41.9e-18499.11ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 S... [more]
A0A6J1F1895.6e-18498.52ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4... [more]
A0A5D3DKE43.4e-14980.18Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3BM123.4e-14980.18ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1[more]
A0A0A0L1E23.0e-14578.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1[more]
BLAST of Carg27293 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20420.18.4e-10055.19RNAse THREE-like protein 2 [more]
AT5G45150.16.5e-6036.20RNAse THREE-like protein 3 [more]
AT1G01040.11.0e-5237.54dicer-like 1 [more]
AT1G01040.21.0e-5237.54dicer-like 1 [more]
AT4G15417.13.0e-3640.17RNAse II-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 20..170
e-value: 5.7E-34
score: 128.8
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 38..145
e-value: 2.0E-21
score: 76.6
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 5..147
score: 33.832542
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 20..170
e-value: 2.1288E-39
score: 133.892
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 262..333
e-value: 3.8E-7
score: 39.7
coord: 176..237
e-value: 0.039
score: 18.5
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 262..332
e-value: 6.8E-15
score: 55.5
coord: 176..236
e-value: 5.3E-5
score: 23.9
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 261..334
score: 11.504129
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 175..238
score: 10.994328
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 1..167
e-value: 6.3E-46
score: 158.4
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 4..166
NoneNo IPR availableGENE3D3.30.160.20coord: 172..243
e-value: 1.3E-8
score: 36.7
NoneNo IPR availableGENE3D3.30.160.20coord: 259..335
e-value: 7.2E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR14950DICER-RELATEDcoord: 7..329
NoneNo IPR availablePANTHERPTHR14950:SF49RIBONUCLEASE 3-LIKE PROTEIN 2-RELATEDcoord: 7..329
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 129..236
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 261..336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27293-RACarg27293-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding