Carg27185 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27185
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase RNF12-A-like isoform X1
Location	Carg_Chr11: 2118199 .. 2121517 (-)
RNA-Seq Expression	Carg27185
Synteny	Carg27185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCCATAATTCAATTTGAAATCAGGGAGCTCTGAATTGGGTGTTCTTCAAGTTTATCATCATCATCATCATCATCATCCATTCTTCTTCCCCAAAACCCAAATGGGTTCGAGCTGTAGTTGTCTGGGGTCGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGGTCATTAAATCCTCTTCTTCTTCATCATCATCGAATCTTTTGTTCTCTCTTCTTCACCCATTTCTTCCCATTATTCCTGAACTTTACTCTAATTCCTCCTTCGAATCTTGTTTCAAAAATCTGGGGTTCCATATCTTCCTCTCAAAGATTGACCCTGAGTAGCATCTTTTATTACGAGCTGTTTATTGCTTTCCTTTGATTCAAGTGTTTATTGCTTTCCTTTGAGCTCTGAATTGGGTTTCGGAATAGTTTTGATCGGAGTATCCCCCGGAATTAGGTTTGAACTGCTGTAGCTTTTGCAATATGTTTCTGTTTGTTTGCTATTTGTTTTGCTTGCGTTTTTGTTGATTGTTGATGGGTAATGATCACTATCCGATTGCTTGGTGATTTTGAATCTTCAATTTGTATGTTATAATCAGTTTCTTACCATCTAAGTTTGCCTTTCGCTCATGTTTTGAATCTTGGATTTCAATAGATGGAAGATTCTATGGTTCAATTTCTTGTCCACCCGGTGGAACATCAACACTGTAATCACAACATTGATGAACTTCAACTCCCCATAAATGGATCTATAAGAATGGGACAGAGCGCTTATTCTGAGAATGACATTGCAGTCAGTGAGGAGCAATGTGCTGTAGATGATATCAATGTTCATGGGAAGCGTGTGTCTCATAATAAGGAATTAGCTCCTCTTCCTCAGGTTAGTGCTGATTATAGCCATGAAGAATCTCGTAGCTATAGTAATGCTTCCAATGGTACTTCACGTAAAGGACATCAATCTTCCGAACCAGTCTGCACGAAGGTTATGTTTGCGGCGAGCAGTTCGACTACTCAAGAGATTGGAGACTCATGTTCCAATGAGCTGACAGGTTGCATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCGTCGCCTTGTCGTCCTGATCTTTCATTAACTTTCCAGTCTCTTGGAGATGAATCTCTGCAAGAGGTACCCTCAAGTTTAGACACTCTTGTGTCTGATGATAGGGAGGTGGGCCAAGGAGATGTTGATATGGTCGGTGTTTCTTCCAATGTTTTGTCTACGAGTAGCACTGATGCAAGTAATCTTGAGGCTAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGGCGTAGTTTCAGAAGGCATAGTGAGTCTCCGTTTGTTTTCCCATCTAATAACTTTAGTAATACAGGAGATCAAGACAGGTGGCTCCTTGATATAAGTGGCGATTTTATCGATGATGAAGCGAGTGGTGATTCAAGACGTTTTTCCAGCAGAATTCACGTCTTGAATGAACAACAAAGAAACTCAAGATCTCAGGTTACATTCTGAATGTTAACAATTATGATCAGTCTTCCATTGTGTTTATACATCATTGCTTCTCAATTAGGTGCAGTTATGGGAAAGAATTCGAAGTAGTCTCAGTGAAAACAGTCGCCAAACTCTACCTTGCCCATCAGGCATTCATCCTAATGGTGCTTGTTCATGCGACTCGTTCTCAAGGGTCGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCACTATTTGAGGTACTTTTTTGAGTTCCAAGTGCTGTGTAATTCAACAGGTATCTCACATCTTGTTCTTTGTGTATCTAAAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCTCTATCCATGGTTTCACTGCCTGCACCAGAATCAGTTGTTGACTCTTTTCCTTTGAAGAACCACGAAAAGAAAACTAATGGAGGGGATGAAATTGAGCAGTAGGTTCCCTCTTTTCCTTAACCAAGTACTCTTGTTTAGTTTCTAATGTGGGATTGTTTACAAATGCTTGGTTAGATGCTACATTTGCCTTGCCGATTACGAAGACGGTGACAAAATAAGAGTCCTTCCTTGCCACCACGAGTATCATATGTCGTGCGTCGATAAATGGTTGAAGGAGATTCATGGGTATGTTGTGCCTATACATCATCAATTACTGCTCCCTTTTTATCTATTTTATGTCTAGGTATCATTTTACTCATGGATTCATCTCCCTGTATCACTGTGTTTAACAGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCACGAACGATGAATGTTCGATTTCAAACTTGGAAATTCCAACGACAATTTGATGAATTGTATAATCGATGACACTAGCGATAAGGAAACTTTCGTAATCCTGTTCCTTGTTAATACTGGGGATGAATTGAATCCCCATGGTTTTGTAAGGCATTCATATTGTACAGCTGTTTCAGAAGAAATATTTGCACAAGTTTTTAGTTTTACCCTGAGCATAAAAGCTCGAATGAATATCTGGAAAAGCCAGTTTGGTTTGAATCATGCAGACATTTGTACAATATACACCAAAAAAGGAACTGTATCAAGACAACAGATAACCAAGACAGGGAGACGGTAATTTCAGCTCTATGCTTACAAATACTTGAGAATTATAAGCACCAACACTGAAAGCCCTTTGGGCTTGCTAATATTGTTGTTGAAGAGATTTGGCTGGCACTTCTTGTCGTCGTCAAATGTCGTCCATCGCATCGAGTTGCTGCCATTATACGAGTATTTGAGGTTGGGATTTGTGGAGTTGAGCTCTGATTGGACTCGTGAAAGCTATTTCTTCAATCCTCTCGCCTAAAACCTTATGATTACGAACGAAATTAGGACACGAAAAACGAAACAAAAGCACCAATTTACAAGCAATTAGGACACGAAAACGAAACAAAAGCACCAATTTACAAGCCAACGCCATTGAAGCAATTCGTTACCTTGTCAATGAAGAAATCGGATGGAGAACCATTTGAATGCAACTTCCTTTTTATTATTTAGTGCTGGGAGCCTTCCCAATTGGACTCGTTGCAATCTGAATTGAACTTGGAAGAACCCCAAAAAGCTTCACTGTCCCATCTTTCATGGAGGTCCAATGGAGCTGTCTCATCCTCTGTTTCGTCTCTCTTCCATTTCGTCAACCCATTGAAGCCCCATTGCTTCTTTCCAGATTTGTTAATTTTTTCTTCAGAATCAGGGCCATA

mRNA sequence

AAAACCCCATAATTCAATTTGAAATCAGGGAGCTCTGAATTGGGTGTTCTTCAAGTTTATCATCATCATCATCATCATCATCCATTCTTCTTCCCCAAAACCCAAATGGGTTCGAGCTGTAGTTGTCTGGGGTCGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGATGGAAGATTCTATGGTTCAATTTCTTGTCCACCCGGTGGAACATCAACACTGTAATCACAACATTGATGAACTTCAACTCCCCATAAATGGATCTATAAGAATGGGACAGAGCGCTTATTCTGAGAATGACATTGCAGTCAGTGAGGAGCAATGTGCTGTAGATGATATCAATGTTCATGGGAAGCGTGTGTCTCATAATAAGGAATTAGCTCCTCTTCCTCAGGTTAGTGCTGATTATAGCCATGAAGAATCTCGTAGCTATAGTAATGCTTCCAATGGTACTTCACGTAAAGGACATCAATCTTCCGAACCAGTCTGCACGAAGGTTATGTTTGCGGCGAGCAGTTCGACTACTCAAGAGATTGGAGACTCATGTTCCAATGAGCTGACAGGTTGCATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCGTCGCCTTGTCGTCCTGATCTTTCATTAACTTTCCAGTCTCTTGGAGATGAATCTCTGCAAGAGGTACCCTCAAGTTTAGACACTCTTGTGTCTGATGATAGGGAGGTGGGCCAAGGAGATGTTGATATGGTCGGTGTTTCTTCCAATGTTTTGTCTACGAGTAGCACTGATGCAAGTAATCTTGAGGCTAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGGCGTAGTTTCAGAAGGCATAGTGAGTCTCCGTTTGTTTTCCCATCTAATAACTTTAGTAATACAGGAGATCAAGACAGGTGGCTCCTTGATATAAGTGGCGATTTTATCGATGATGAAGCGAGTGGTGATTCAAGACGTTTTTCCAGCAGAATTCACGTCTTGAATGAACAACAAAGAAACTCAAGATCTCAGGTGCAGTTATGGGAAAGAATTCGAAGTAGTCTCAGTGAAAACAGTCGCCAAACTCTACCTTGCCCATCAGGCATTCATCCTAATGGTGCTTGTTCATGCGACTCGTTCTCAAGGGTCGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCACTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCTCTATCCATGGTTTCACTGCCTGCACCAGAATCAGTTGTTGACTCTTTTCCTTTGAAGAACCACGAAAAGAAAACTAATGGAGGGGATGAAATTGAGCAATGCTACATTTGCCTTGCCGATTACGAAGACGGTGACAAAATAAGAGTCCTTCCTTGCCACCACGAGTATCATATGTCGTGCGTCGATAAATGGTTGAAGGAGATTCATGGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCACGAACGATGAATGTTCGATTTCAAACTTGGAAATTCCAACGACAATTTGATGAATTGTATAATCGATGACACTAGCGATAAGGAAACTTTCGTAATCCTGTTCCTTGTTAATACTGGGGATGAATTGAATCCCCATGGTTTTGTAAGGCATTCATATTGTACAGCTGTTTCAGAAGAAATATTTGCACAAGTTTTTAGTTTTACCCTGAGCATAAAAGCTCGAATGAATATCTGGAAAAGCCAGTTTGGTTTGAATCATGCAGACATTTGTACAATATACACCAAAAAAGGAACTGTATCAAGACAACAGATAACCAAGACAGGGAGACGGTAATTTCAGCTCTATGCTTACAAATACTTGAGAATTATAAGCACCAACACTGAAAGCCCTTTGGGCTTGCTAATATTGTTGTTGAAGAGATTTGGCTGGCACTTCTTGTCGTCGTCAAATGTCGTCCATCGCATCGAGTTGCTGCCATTATACGAGTATTTGAGGTTGGGATTTGTGGAGTTGAGCTCTGATTGGACTCGTGAAAGCTATTTCTTCAATCCTCTCGCCTAAAACCTTATGATTACGAACGAAAAATCGGATGGAGAACCATTTGAATGCAACTTCCTTTTTATTATTTAGTGCTGGGAGCCTTCCCAATTGGACTCGTTGCAATCTGAATTGAACTTGGAAGAACCCCAAAAAGCTTCACTGTCCCATCTTTCATGGAGGTCCAATGGAGCTGTCTCATCCTCTGTTTCGTCTCTCTTCCATTTCGTCAACCCATTGAAGCCCCATTGCTTCTTTCCAGATTTGTTAATTTTTTCTTCAGAATCAGGGCCATA

Coding sequence (CDS)

ATGGGTTCGAGCTGTAGTTGTCTGGGGTCGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTTTTCTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGATGGAAGATTCTATGGTTCAATTTCTTGTCCACCCGGTGGAACATCAACACTGTAATCACAACATTGATGAACTTCAACTCCCCATAAATGGATCTATAAGAATGGGACAGAGCGCTTATTCTGAGAATGACATTGCAGTCAGTGAGGAGCAATGTGCTGTAGATGATATCAATGTTCATGGGAAGCGTGTGTCTCATAATAAGGAATTAGCTCCTCTTCCTCAGGTTAGTGCTGATTATAGCCATGAAGAATCTCGTAGCTATAGTAATGCTTCCAATGGTACTTCACGTAAAGGACATCAATCTTCCGAACCAGTCTGCACGAAGGTTATGTTTGCGGCGAGCAGTTCGACTACTCAAGAGATTGGAGACTCATGTTCCAATGAGCTGACAGGTTGCATTCAAGAGGACGAGGCAACAGCTTACCGGAACCCAGACTCTGAATCGTCGCCTTGTCGTCCTGATCTTTCATTAACTTTCCAGTCTCTTGGAGATGAATCTCTGCAAGAGGTACCCTCAAGTTTAGACACTCTTGTGTCTGATGATAGGGAGGTGGGCCAAGGAGATGTTGATATGGTCGGTGTTTCTTCCAATGTTTTGTCTACGAGTAGCACTGATGCAAGTAATCTTGAGGCTAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGGCGTAGTTTCAGAAGGCATAGTGAGTCTCCGTTTGTTTTCCCATCTAATAACTTTAGTAATACAGGAGATCAAGACAGGTGGCTCCTTGATATAAGTGGCGATTTTATCGATGATGAAGCGAGTGGTGATTCAAGACGTTTTTCCAGCAGAATTCACGTCTTGAATGAACAACAAAGAAACTCAAGATCTCAGGTGCAGTTATGGGAAAGAATTCGAAGTAGTCTCAGTGAAAACAGTCGCCAAACTCTACCTTGCCCATCAGGCATTCATCCTAATGGTGCTTGTTCATGCGACTCGTTCTCAAGGGTCGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCACTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCTCTATCCATGGTTTCACTGCCTGCACCAGAATCAGTTGTTGACTCTTTTCCTTTGAAGAACCACGAAAAGAAAACTAATGGAGGGGATGAAATTGAGCAATGCTACATTTGCCTTGCCGATTACGAAGACGGTGACAAAATAAGAGTCCTTCCTTGCCACCACGAGTATCATATGTCGTGCGTCGATAAATGGTTGAAGGAGATTCATGGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCACGAACGATGAATGTTCGATTTCAAACTTGGAAATTCCAACGACAATTTGA

Protein sequence

MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCNHNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSADYSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEATAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNVLSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISGDFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNGACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTNDECSISNLEIPTTI

Homology

[Close]

BLAST of Carg27185 vs. NCBI nr
Match: KAG7021745.1 (E3 ubiquitin-protein ligase-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1000.0 bits (2584), Expect = 7.5e-288
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAGTNDECSISNLEIPTTI
Sbjct: 481 GDVRAGTNDECSISNLEIPTTI 502

[Close]

BLAST of Carg27185 vs. NCBI nr
Match: XP_022932117.1 (E3 ubiquitin-protein ligase RNF12-B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 980.7 bits (2534), Expect = 4.7e-282
Identity = 494/502 (98.41%), Postives = 497/502 (99.00%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLP NGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPTNGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVC KVMFAASSSTTQEIGDSCS+ELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCMKVMFAASSSTTQEIGDSCSDELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAY+NPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYQNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSN+FSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNSFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAGTNDECSISNLEIPTTI
Sbjct: 481 GDVRAGTNDECSISNLEIPTTI 502

[Close]

BLAST of Carg27185 vs. NCBI nr
Match: XP_022932122.1 (E3 ubiquitin-protein ligase RNF12-B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 972.2 bits (2512), Expect = 1.7e-279
Identity = 492/502 (98.01%), Postives = 495/502 (98.61%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLP NGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPTNGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVC KVMFAASSSTTQEIGDSCS+ELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCMKVMFAASSSTTQEIGDSCSDELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAY+NPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYQNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSN+FSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNSFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRS  QLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRS--QLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAGTNDECSISNLEIPTTI
Sbjct: 481 GDVRAGTNDECSISNLEIPTTI 500

[Close]

BLAST of Carg27185 vs. NCBI nr
Match: XP_023530449.1 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 971.1 bits (2509), Expect = 3.7e-279
Identity = 486/502 (96.81%), Postives = 492/502 (98.01%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQME+SMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEESMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLP NGSIRMGQS YS+NDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPTNGSIRMGQSVYSDNDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVCTK MFAASSSTTQE+GDSCSNELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCTKAMFAASSSTTQEVGDSCSNELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAYRNPDSESSPC PDLS TFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYRNPDSESSPCHPDLSFTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLD+SG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDLSG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
            CSCDSFSRVEHSST ASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 PCSCDSFSRVEHSSTHASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAG+NDECSISNLEIPT+I
Sbjct: 481 GDVRAGSNDECSISNLEIPTSI 502

[Close]

BLAST of Carg27185 vs. NCBI nr
Match: XP_023001605.1 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 966.1 bits (2496), Expect = 1.2e-277
Identity = 487/502 (97.01%), Postives = 491/502 (97.81%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRV  NKELAPLPQVSAD
Sbjct: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVYDNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVCTKVMFAASSSTTQE+GDSCSNELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCTKVMFAASSSTTQEVGDSCSNELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAYRNPDSES PCRPDLSLT +SLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYRNPDSESLPCRPDLSLTIESLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFS VEHSSTR SISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSSVEHSSTRESISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYE+GDKIRVLPC HEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEEGDKIRVLPCRHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAG+NDECSISNLEIP TI
Sbjct: 481 GDVRAGSNDECSISNLEIPATI 502

[Close]

BLAST of Carg27185 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.2e-15
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 432 GDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTNDE 491
           GDE + C ICL +YEDGDK+RVLPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Carg27185 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.4e-15
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 432 GDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTNDE 491
           GDE + C ICL +YEDGDK+R+LPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Carg27185 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.3e-15
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 432 GDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTNDE 491
           GD+ + C ICL +YEDGDK+RVLPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Carg27185 vs. ExPASy Swiss-Prot
Match: O54965 (E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 32/65 (49.23%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 428 KTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGT 487
           K   GDE + C ICL +YEDGDK+R+LPC H YH  CVD WL +    CP+C+  V    
Sbjct: 230 KFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289

Query: 488 NDECS 493
            D  S
Sbjct: 290 GDSDS 294

[Close]

BLAST of Carg27185 vs. ExPASy Swiss-Prot
Match: Q66HG0 (E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 32/65 (49.23%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 428 KTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGT 487
           K   GDE + C ICL +YEDGDK+R+LPC H YH  CVD WL +    CP+C+  V    
Sbjct: 230 KFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289

Query: 488 NDECS 493
            D  S
Sbjct: 290 GDSDS 294

[Close]

BLAST of Carg27185 vs. ExPASy TrEMBL
Match: A0A6J1EVR4 (E3 ubiquitin-protein ligase RNF12-B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438424 PE=4 SV=1)

HSP 1 Score: 980.7 bits (2534), Expect = 2.3e-282
Identity = 494/502 (98.41%), Postives = 497/502 (99.00%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLP NGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPTNGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVC KVMFAASSSTTQEIGDSCS+ELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCMKVMFAASSSTTQEIGDSCSDELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAY+NPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYQNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSN+FSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNSFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAGTNDECSISNLEIPTTI
Sbjct: 481 GDVRAGTNDECSISNLEIPTTI 502

[Close]

BLAST of Carg27185 vs. ExPASy TrEMBL
Match: A0A6J1EVS0 (E3 ubiquitin-protein ligase RNF12-B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438424 PE=4 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 8.1e-280
Identity = 492/502 (98.01%), Postives = 495/502 (98.61%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLP NGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD
Sbjct: 61  HNIDELQLPTNGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVC KVMFAASSSTTQEIGDSCS+ELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCMKVMFAASSSTTQEIGDSCSDELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAY+NPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYQNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSN+FSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNSFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRS  QLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRS--QLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAGTNDECSISNLEIPTTI
Sbjct: 481 GDVRAGTNDECSISNLEIPTTI 500

[Close]

BLAST of Carg27185 vs. ExPASy TrEMBL
Match: A0A6J1KLN3 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495681 PE=4 SV=1)

HSP 1 Score: 966.1 bits (2496), Expect = 5.8e-278
Identity = 487/502 (97.01%), Postives = 491/502 (97.81%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRV  NKELAPLPQVSAD
Sbjct: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVYDNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVCTKVMFAASSSTTQE+GDSCSNELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCTKVMFAASSSTTQEVGDSCSNELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAYRNPDSES PCRPDLSLT +SLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYRNPDSESLPCRPDLSLTIESLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFS VEHSSTR SISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSSVEHSSTRESISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYE+GDKIRVLPC HEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEEGDKIRVLPCRHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAG+NDECSISNLEIP TI
Sbjct: 481 GDVRAGSNDECSISNLEIPATI 502

[Close]

BLAST of Carg27185 vs. ExPASy TrEMBL
Match: A0A6J1KH21 (E3 ubiquitin-protein ligase RNF12-B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495681 PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 2.1e-275
Identity = 485/502 (96.61%), Postives = 489/502 (97.41%), Query Frame = 0


Query: 1   MGSSCSCLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60
           MGSSCS LGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN
Sbjct: 1   MGSSCSRLGSSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSMVQFLVHPVEHQHCN 60

Query: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVSHNKELAPLPQVSAD 120
           HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRV  NKELAPLPQVSAD
Sbjct: 61  HNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVHGKRVYDNKELAPLPQVSAD 120

Query: 121 YSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQEIGDSCSNELTGCIQEDEA 180
           YSHEESRSYSNASNGTS KGHQSSEPVCTKVMFAASSSTTQE+GDSCSNELTGCIQEDEA
Sbjct: 121 YSHEESRSYSNASNGTSCKGHQSSEPVCTKVMFAASSSTTQEVGDSCSNELTGCIQEDEA 180

Query: 181 TAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240
           TAYRNPDSES PCRPDLSLT +SLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV
Sbjct: 181 TAYRNPDSESLPCRPDLSLTIESLGDESLQEVPSSLDTLVSDDREVGQGDVDMVGVSSNV 240

Query: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300
           LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG
Sbjct: 241 LSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSNTGDQDRWLLDISG 300

Query: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSSLSENSRQTLPCPSGIHPNG 360
           DFIDDEASGDSRRFSSRIHVLNEQQRNSRS  QLWERIRSSLSENSRQ LPCPSGIHPNG
Sbjct: 301 DFIDDEASGDSRRFSSRIHVLNEQQRNSRS--QLWERIRSSLSENSRQNLPCPSGIHPNG 360

Query: 361 ACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420
           ACSCDSFS VEHSSTR SISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF
Sbjct: 361 ACSCDSFSSVEHSSTRESISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSF 420

Query: 421 PLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCR 480
           PLKNHEKKTNGGDEIEQCYICLADYE+GDKIRVLPC HEYHMSCVDKWLKEIHGVCPLCR
Sbjct: 421 PLKNHEKKTNGGDEIEQCYICLADYEEGDKIRVLPCRHEYHMSCVDKWLKEIHGVCPLCR 480

Query: 481 GDVRAGTNDECSISNLEIPTTI 503
           GDVRAG+NDECSISNLEIP TI
Sbjct: 481 GDVRAGSNDECSISNLEIPATI 500

[Close]

BLAST of Carg27185 vs. ExPASy TrEMBL
Match: A0A6J1KJ55 (E3 ubiquitin-protein ligase RNF12-A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495681 PE=4 SV=1)

HSP 1 Score: 889.8 bits (2298), Expect = 5.3e-255
Identity = 447/461 (96.96%), Postives = 451/461 (97.83%), Query Frame = 0


Query: 42  MEDSMVQFLVHPVEHQHCNHNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVH 101
           MEDSMVQFLVHPVEHQHCNHNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVH
Sbjct: 1   MEDSMVQFLVHPVEHQHCNHNIDELQLPINGSIRMGQSAYSENDIAVSEEQCAVDDINVH 60

Query: 102 GKRVSHNKELAPLPQVSADYSHEESRSYSNASNGTSRKGHQSSEPVCTKVMFAASSSTTQ 161
           GKRV  NKELAPLPQVSADYSHEESRSYSNASNGTS KGHQSSEPVCTKVMFAASSSTTQ
Sbjct: 61  GKRVYDNKELAPLPQVSADYSHEESRSYSNASNGTSCKGHQSSEPVCTKVMFAASSSTTQ 120

Query: 162 EIGDSCSNELTGCIQEDEATAYRNPDSESSPCRPDLSLTFQSLGDESLQEVPSSLDTLVS 221
           E+GDSCSNELTGCIQEDEATAYRNPDSES PCRPDLSLT +SLGDESLQEVPSSLDTLVS
Sbjct: 121 EVGDSCSNELTGCIQEDEATAYRNPDSESLPCRPDLSLTIESLGDESLQEVPSSLDTLVS 180

Query: 222 DDREVGQGDVDMVGVSSNVLSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFP 281
           DDREVGQGDVDMVGVSSNVLSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFP
Sbjct: 181 DDREVGQGDVDMVGVSSNVLSTSSTDASNLEARRNSRRLFWDAFSRRSFRRHSESPFVFP 240

Query: 282 SNNFSNTGDQDRWLLDISGDFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSS 341
           SNNFSNTGDQDRWLLDISGDFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSS
Sbjct: 241 SNNFSNTGDQDRWLLDISGDFIDDEASGDSRRFSSRIHVLNEQQRNSRSQVQLWERIRSS 300

Query: 342 LSENSRQTLPCPSGIHPNGACSCDSFSRVEHSSTRASISRIIMLAEALFEVLDEIHGQPV 401
           LSENSRQ LPCPSGIHPNGACSCDSFS VEHSSTR SISRIIMLAEALFEVLDEIHGQPV
Sbjct: 301 LSENSRQNLPCPSGIHPNGACSCDSFSSVEHSSTRESISRIIMLAEALFEVLDEIHGQPV 360

Query: 402 SLALSMVSLPAPESVVDSFPLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYH 461
           SLALSMVSLPAPESVVDSFPLKNHEKKTNGGDEIEQCYICLADYE+GDKIRVLPC HEYH
Sbjct: 361 SLALSMVSLPAPESVVDSFPLKNHEKKTNGGDEIEQCYICLADYEEGDKIRVLPCRHEYH 420

Query: 462 MSCVDKWLKEIHGVCPLCRGDVRAGTNDECSISNLEIPTTI 503
           MSCVDKWLKEIHGVCPLCRGDVRAG+NDECSISNLEIP TI
Sbjct: 421 MSCVDKWLKEIHGVCPLCRGDVRAGSNDECSISNLEIPATI 461

[Close]

BLAST of Carg27185 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-36
Identity = 84/176 (47.73%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 323 EQQRNSRSQVQLWERIRSSLSENS-RQTLPCP-SGIHPNGACSC-------DSFSRVEHS 382
           E++R  RSQV+  +R+ S     +      C  SG    G C+C        + +  + +
Sbjct: 362 ERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSGQDQAGRCTCRAVTNRGSTTATTDET 421

Query: 383 STRASISRIIMLAEALFEVLDEIHGQPVSLA------LSMVSLPAPESVVDSFPLKNHEK 442
           + RASISRI++LAEALFEVLDEIH Q V L+       S+ S+PAP  VVD  P+K + K
Sbjct: 422 NARASISRIVLLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTK 481

Query: 443 KTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDV 484
             +  ++  QCYICL +YE+ D IR LPCHHE+H +CVDKWLKEIH VCPLCRGD+
Sbjct: 482 SQS--EDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535

[Close]

BLAST of Carg27185 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-35
Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 323 EQQRNSRSQVQLWERIRSSLSENS-RQTLPCP-SGIHPNGACSC-------DSFSRVEHS 382
           E++R  RSQV+  +R+ S     +      C  SG    G C+C        + +  + +
Sbjct: 362 ERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSGQDQAGRCTCRAVTNRGSTTATTDET 421

Query: 383 STRASISRIIMLAEALFEVLDEIHGQPVSLA------LSMVSLPAPESVVDSFPLKNHEK 442
           + RASISRI++LAEALFEVLDEIH Q V L+       S+ S+PAP  VVD  P+K + K
Sbjct: 422 NARASISRIVLLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTK 481

Query: 443 KTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHG-VCPLCRGDV 484
             +  ++  QCYICL +YE+ D IR LPCHHE+H +CVDKWLKEIH  VCPLCRGD+
Sbjct: 482 SQS--EDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDI 536

[Close]

BLAST of Carg27185 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-14
Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 438 CYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTNDE 491
           C ICL +YE GDK+R+LPCHH++H++CVD WL +    CP+C+ D R+ + D+
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDK 286

[Close]

BLAST of Carg27185 vs. TAIR 10
Match: AT1G71980.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-13
Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 395 EIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVL 454
           E HG    L  +M SL     +  SF    HE  T        C ICL DY  GDK+R+L
Sbjct: 202 EFHGMSRRLVKAMPSL-----IFSSF----HEDNTTA----FTCAICLEDYTVGDKLRLL 261

Query: 455 PCHHEYHMSCVDKWLKEIHGVCPLCRGDVRAGTND 490
           PC H++H +CVD WL      CP+C+ D R  T +
Sbjct: 262 PCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE 283

[Close]

BLAST of Carg27185 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-12
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 417 VDSFPLKNHEKKTNGGDEIEQCYICLADYEDGDKIRVLPCHHEYHMSCVDKWLKEIHGVC 476
           + S P K +++  N     E C IC  DYED + + +LPC H YH  C++ WLK I+ VC
Sbjct: 267 IASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLK-INKVC 326

Query: 477 PLCRGDVRAGTNDE 491
           P+C  +V   T+ +
Sbjct: 327 PVCSAEVSTSTSGQ 339

The following BLAST results are available for this feature:

BLAST of Carg27185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021745.1	7.5e-288	100.00	E3 ubiquitin-protein ligase-like protein [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022932117.1	4.7e-282	98.41	E3 ubiquitin-protein ligase RNF12-B-like isoform X1 [Cucurbita moschata]	[more]
XP_022932122.1	1.7e-279	98.01	E3 ubiquitin-protein ligase RNF12-B-like isoform X2 [Cucurbita moschata]	[more]
XP_023530449.1	3.7e-279	96.81	E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023001605.1	1.2e-277	97.01	E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg27185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	4.2e-15	55.93	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q5XIL0	5.4e-15	54.24	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q9H6Y7	9.3e-15	54.24	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
O54965	1.3e-13	49.23	E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2	[more]
Q66HG0	1.3e-13	49.23	E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV...	[more]

BLAST of Carg27185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVR4	2.3e-282	98.41	E3 ubiquitin-protein ligase RNF12-B-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EVS0	8.1e-280	98.01	E3 ubiquitin-protein ligase RNF12-B-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1KLN3	5.8e-278	97.01	E3 ubiquitin-protein ligase RNF12-A-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1KH21	2.1e-275	96.61	E3 ubiquitin-protein ligase RNF12-B-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1KJ55	5.3e-255	96.96	E3 ubiquitin-protein ligase RNF12-A-like isoform X3 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Carg27185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45290.1	1.5e-36	47.73	RING/U-box superfamily protein	[more]
AT5G45290.2	2.2e-35	47.46	RING/U-box superfamily protein	[more]
AT4G09560.1	3.6e-14	50.94	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G71980.1	4.0e-13	40.00	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT3G19910.1	1.2e-12	39.19	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 438..479 e-value: 2.3E-6 score: 37.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 437..480 e-value: 4.8E-11 score: 42.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 438..480 score: 12.459772
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 404..486 e-value: 1.1E-20 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..145
None	No IPR available	PANTHER	PTHR47168	RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED	coord: 1..499
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 437..480 e-value: 2.90777E-18 score: 76.1113
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 426..485

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27185-RA	Carg27185-RA	mRNA