Carg27156 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27156
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	homeobox protein knotted-1-like LET6
Location	Carg_Chr11: 12047728 .. 12051557 (+)
RNA-Seq Expression	Carg27156
Synteny	Carg27156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATACCTTTATTCCCATCAATCTCACCACTTCTGGTTATCCATTTTGATCCCTCTTCATCCCTCCACTCACACTCCTTCCCCTTCTCCTCCTCCAATTCCTCTCTCTAAATCCCAGTCAGAACCAATAAAACAAAATTAACTCACACCCATGGTGCATTGAACGAGGTTGTTCCATTCCACTTCTCCATCTCCTTGGAAACCCAACAATAAAGGGTTCATAGGGTTTGTTCCTACCACTGTTTTTGTGTAGCGATTGACATCTGCCCGTGTGACAATAACCCCCCCAAGTACGACCAAAAACACCCTCTTTTACTGTGTCTCTTGAGCTTAAATAGCGGGTGAAAAGGTTAGCCATACCATCATGGACCGTGGCTTGATCATGTTCGATCATAACAACAACAACGACAACAACAACGACAGCGATAGCAACAACAGGAAGATGTTTTTGCCTTACAATGATCATGTTGAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGATTGTGGTTTGGATTTGTTTTGTTGTTGTTCATGATTTCATGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGGTTTTTTCAGGTGGGTGCGCCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTGTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTACTCTCTCTCTCTCTCTATTCTAATCATGTTTTTATTTATGTTCTTAGTGATTAATGCGAGATCTTACGCCAATTGGGTATGAAACGAAACGTCCTTTATAAGGTGTGGAAACCTAGACTTGAAGGGAAAGTTCAAACAGAAACCTCTTTCTATTAGATACGTTTTAAAAACTTGGAGGGGAAGGTTGGAAAGCCTTTTGTTAGAGTATTATGATTAATGTGAGATTTCACGTCAGTGGGAGGAGAACAAAACACTCATTATAAGAGTGTGGAAATCTCTTCCTATCAGATGCGTTTTAAAAATCTCGAGGGGAAGCTTGAAGGGGAAAGTTCAAAGAGAAATCTTTTTCCTATCAGACGCATTTTAAAAACTTTGAAGAGAAGCTCAGGAGCCTTTTGTTAGATTATTATGATCCATGTGAGATCTTGTGTCAGTTTGGAGGAGAACGAAACACCGTTCATAAGGGTGTGGAAACCTCTTTATATCAGGCGAGATTTAAAAATCTCGAGGGAAAGTTTGAAAGGTAAAGTTCAAAGAGAAACCTCTTCCTATCAGACGCGTTTTGAAAACTTCGAGGGGAAGTCCAAGAGCCTTTTGTTAGATTATTATGATTAATGTGAGATCTCACGTCAATGGAGAAAAGAATGAAACACTCCTTAACAGAGTGTAGAAACCTTTTCCTATCAGACGCGTTTAAAATTTTTGAGGGAAAGCCCGAAAAGGATAAGTTTTGAGCTTTTTAGTTCATGGTTTAATTGCACATCAAATCAGCTCAGAAATGAGTACTGGTCGTTTTTTTTTTTTTTTTTGTTAACATCAATTTGTATATAAATATGATGTTTTTTTATTGCAACCATTTTAAGGTTATCCTTTGAAGTTAATTGGTCGTGTAAGTGTAGAAGGTTGCTCTAAAGACTTGAAAAACCAAACATACATTTCTAGGTTAATGCTAAATCTGTTTATGTCTGAATAGGATCCAAGTTGGGTTTGCTTCATCTCCTTACTTTGAATGGTAAAGGAAATGTTTTTTAACCATGGTTAGAGGGTTTTGGGATTCGAACCTAAACGAATACATGTCTTAACCATGGTTATGTTAGTGTAAGCTGTCGTAAAAATTTTAATGAGTTACAAGGTTAAATCTTTAGGATCCCTAAACTTTGTCAAAAGTTCTAATTTAGCACTTACATTTTAGTCCCTGTATTTTTTTTATTTTTTACTATTTAGCTTCTAAACTTTAGTGTAAGAAATAAATTAGTTTGAAAACTTTAGAATTTGTACAAATTTAATCTAAATTAAGTGTTAAAAGTCTTATTAATTAGTTTACAATAGAGATTAAATCGTTACACATTGAAGTTCAGGAGCTAAACTGATAACGATGAACAGTTTGGAACATCTTTTTTGAATTATACATCGAATTTGACAACTTCTTGTTCGTAACATAGTAATAACACCATTGAAAGTTCGGTTCTTGACTCAATATAGATATGTCTTTAGCTTGGTTTCAACTTTATAAAGTGAGAAATGAGATGAATTTCTCCTTTAAATGATTCTATCTTTTGAATATTAATTCCATCCCATGAAGAAAGTTAGGCCTCAAGATGTGGCCCAATGGTTCTTTTTAGGATAGTTTTAGTGAGAAAGATTATATGAATCTTGATTTTTGGGTTAATTTTCAAGTTTAGACTGTTCGGGATTGTTGGGAGTGAGTCCTACGATGAATAACTTAGGGAATGATTATGGGTTTATAAGTAAAAGAATACATTTCTATTGGTACGAGGTTTTTCGGGAAATTCCAAAACAAACCCATGAGAGTTTATGTTCAAAGTAGACAATATCATACCATTGTGACCGTAACTATCTTCTCAGATCATGAATGTTGGTGCTAGGTTATGAGCTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTTGTCGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATATAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTCAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGTATGCCATTAGACATTGTAATATCGACATGACTGTTATGGATGGTTCGATACTAATGGTCCTTGCTTATATACACACTAATGGCAGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGACTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGACATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCAATGGACTGTTCTTCCACTCTCTTCTGATTACATATCATTTTAATGTTGGTTTGTTTATGTTCTAACTCATGTTCATTATGTTTTGAATTGTTCTACATGTTGAACTCAAACCCTTTCTCTTGATTCTTGGTTTAGGGTTCTTGTATTGTATGCGTTTGTTTTAGTACTAATTTAGCTCGGTTCACATTGTTTAACTTTTCGAAGTTTTATTTTTAAAGTACAATAGAAAATCTCGTTTCTTGATCATCTGTAGTGCTCTATGTTTCAGATCTGGATTCGATATCTGTATGCTCTTAACATTCTGCTGCATTTCCAGTGATATGGTCATATTACTTGGTTCTCGCTTCATATGAGACTCGATCTTAATTCTGAGTGAGATATAAACTTTTGGGGCGTGAAGCTTATTCTTTGATCTATATATGTGAGAGTGACTTTTATAGTCGATTCAATAAGCTTACCATTTTAGCGATTTGACAAAATAGGACGTTGGAAACATAATTTCACGAGATAAAATTCACTCATTTTTATACAGGGTTGAGTAGATGACT

mRNA sequence

CAAAATACCTTTATTCCCATCAATCTCACCACTTCTGGTTATCCATTTTGATCCCTCTTCATCCCTCCACTCACACTCCTTCCCCTTCTCCTCCTCCAATTCCTCTCTCTAAATCCCAGTCAGAACCAATAAAACAAAATTAACTCACACCCATGGTGCATTGAACGAGGTTGTTCCATTCCACTTCTCCATCTCCTTGGAAACCCAACAATAAAGGGTTCATAGGGTTTGTTCCTACCACTGTTTTTGTGTAGCGATTGACATCTGCCCGTGTGACAATAACCCCCCCAAGTACGACCAAAAACACCCTCTTTTACTGTGTCTCTTGAGCTTAAATAGCGGGTGAAAAGGTTAGCCATACCATCATGGACCGTGGCTTGATCATGTTCGATCATAACAACAACAACGACAACAACAACGACAGCGATAGCAACAACAGGAAGATGTTTTTGCCTTACAATGATCATGTTGAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGTGCGCCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTGTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTATGAGCTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTTGTCGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATATAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTCAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGACTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGACATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCAATGGACTGTTCTTCCACTCTCTTCTGATTACATATCATTTTAATGTTGGTTTGTTTATGTTCTAACTCATGTTCATTATGTTTTGAATTGTTCTACATGTTGAACTCAAACCCTTTCTCTTGATTCTTGGTTTAGGGTTCTTGTATTGTATGCGTTTGTTTTAGTACTAATTTAGCTCGGTTCACATTGTTTAACTTTTCGAAGTTTTATTTTTAAAGTACAATAGAAAATCTCGTTTCTTGATCATCTGTAGTGCTCTATGTTTCAGATCTGGATTCGATATCTGTATGCTCTTAACATTCTGCTGCATTTCCAGTGATATGGTCATATTACTTGGTTCTCGCTTCATATGAGACTCGATCTTAATTCTGAGTGAGATATAAACTTTTGGGGCGTGAAGCTTATTCTTTGATCTATATATGTGAGAGTGACTTTTATAGTCGATTCAATAAGCTTACCATTTTAGCGATTTGACAAAATAGGACGTTGGAAACATAATTTCACGAGATAAAATTCACTCATTTTTATACAGGGTTGAGTAGATGACT

Coding sequence (CDS)

ATGGACCGTGGCTTGATCATGTTCGATCATAACAACAACAACGACAACAACAACGACAGCGATAGCAACAACAGGAAGATGTTTTTGCCTTACAATGATCATGTTGAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGTGCGCCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTGTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTATGAGCTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTTGTCGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATATAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTCAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGACTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGACATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCAATGGACTGTTCTTCCACTCTCTTCTGA

Protein sequence

MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

Homology

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BLAST of Carg27156 vs. NCBI nr
Match: KAG7022846.1 (Homeobox protein SBH1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.8 bits (1527), Expect = 1.6e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 290

[Close]

BLAST of Carg27156 vs. NCBI nr
Match: KAG6589145.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.5 bits (1495), Expect = 8.2e-162
Identity = 286/290 (98.62%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDHN    NNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDHN----NNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]

BLAST of Carg27156 vs. NCBI nr
Match: XP_022930731.1 (homeobox protein knotted-1-like LET6 [Cucurbita moschata])

HSP 1 Score: 578.6 bits (1490), Expect = 3.1e-161
Identity = 284/290 (97.93%), Postives = 287/290 (98.97%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDH  NNDNNNDSDSNN+KMFLPYNDHV++CR KLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDH--NNDNNNDSDSNNKKMFLPYNDHVQSCRDKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 288

[Close]

BLAST of Carg27156 vs. NCBI nr
Match: XP_022988875.1 (homeobox protein knotted-1-like LET6 [Cucurbita maxima])

HSP 1 Score: 578.2 bits (1489), Expect = 4.0e-161
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDHN    NNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDHN----NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]

BLAST of Carg27156 vs. NCBI nr
Match: XP_023529301.1 (homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.5 bits (1482), Expect = 2.6e-160
Identity = 283/291 (97.25%), Postives = 287/291 (98.63%), Query Frame = 0


Query: 1   MDRGLIMFDHNNN-NDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQ 60
           MDRGLIMFDHNNN +DNNNDSDSNN+KMFLPYNDH ++CRAKLMAHPLFPRLLASYVNCQ
Sbjct: 1   MDRGLIMFDHNNNDDDNNNDSDSNNKKMFLPYNDHGQSCRAKLMAHPLFPRLLASYVNCQ 60

Query: 61  KVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM 120
           KVGAPPDVVARLEQACTVAAGNCRTV RGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM
Sbjct: 61  KVGAPPDVVARLEQACTVAAGNCRTVGRGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM 120

Query: 121 VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR 180
           VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR
Sbjct: 121 VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR 180

Query: 181 KYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK 240
           KYSGYL SLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK
Sbjct: 181 KYSGYLDSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK 240

Query: 241 QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291

[Close]

BLAST of Carg27156 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 372.5 bits (955), Expect = 4.4e-102
Identity = 188/260 (72.31%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 39  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 98
           +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLD 181

Query: 99  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSS-DGY--ELVGQNECS 158
           QFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ SS SS  GY    + +N   
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNG 241

Query: 159 KEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLD 218
              E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLD
Sbjct: 242 SSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 301

Query: 219 WWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-H 278
           WWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP H
Sbjct: 302 WWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH 361

Query: 279 YYLDNLICNPFSMD-CSSTL 290
           Y++DN++ NPF MD  SST+
Sbjct: 362 YFMDNVLGNPFPMDHISSTM 381

[Close]

BLAST of Carg27156 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-100
Identity = 187/295 (63.39%), Postives = 223/295 (75.59%), Query Frame = 0


Query: 15  DNNNDSDSNNRKMFLPY-------------NDHVETCRAKLMAHPLFPRLLASYVNCQKV 74
           +NNN   SNN  +FLP+             N    + ++K+MAHP + RLL +Y+NCQK+
Sbjct: 60  NNNNAETSNNNILFLPFMDNNNNNNPQEDNNSSSSSIKSKIMAHPHYHRLLTAYLNCQKI 119

Query: 75  GAPPDVVARLEQACTVAAGNCRTVAR------GDDPGLDQFMEAYCEMLSKYEQELTKPF 134
           GAPP+VVARLE+ C  +A   R+ +       G+DP LDQFMEAYCEML+KYEQEL+KPF
Sbjct: 120 GAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKYEQELSKPF 179

Query: 135 KEAMVFFSRIESQLKALAASSSSSDGYEL-VGQNECSKEIEVVDMNENYIDPQAEEKELK 194
           KEAMVF SRIE Q KAL  + +SS    L    +      E VD+N ++IDPQAE++ELK
Sbjct: 180 KEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSFIDPQAEDRELK 239

Query: 195 GQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAEST 254
           GQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQL+DWW RH KWPYPSESQK+ALAEST
Sbjct: 240 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAEST 299

Query: 255 GLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTL 290
           GLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DN++ N F MD + +L
Sbjct: 300 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLANHFPMDMTPSL 354

[Close]

BLAST of Carg27156 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-99
Identity = 195/308 (63.31%), Postives = 229/308 (74.35%), Query Frame = 0


Query: 10  HNNNNDNNNDSDSNNRKMFLPY----NDH------------------VETCRAKLMAHPL 69
           HNN+N+N  D D NN    L Y    +DH                      +AK+MAHP 
Sbjct: 74  HNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNNGSSSSSSSSAVKAKIMAHPH 133

Query: 70  FPRLLASYVNCQKVGAPPDVVARLEQAC----TVAAGNCRTVAR--GDDPGLDQFMEAYC 129
           + RLLA+YVNCQKVGAPP+VVARLE+AC    T+A G+    +   G+DP LDQFMEAYC
Sbjct: 134 YHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPALDQFMEAYC 193

Query: 130 EMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSS---SSDGYELVGQNECSKEIEVVD 189
           EML+KYEQEL+KP KEAM+F  RIE Q K L  SSS   S++G +  G +E     E VD
Sbjct: 194 EMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNGSSE-----EDVD 253

Query: 190 MNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYK 249
           ++ N IDPQAE+++LKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLL+WW+RHYK
Sbjct: 254 LH-NMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYK 313

Query: 250 WPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC 287
           WPYPSESQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMD +HPHYY+DN++ 
Sbjct: 314 WPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLG 373

[Close]

BLAST of Carg27156 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 4.6e-99
Identity = 179/253 (70.75%), Postives = 206/253 (81.42%), Query Frame = 0


Query: 39  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 98
           +AK+MAHP + RLL +YVNCQKVGAPP+V ARLE+ C+ AA        T + G+DPGLD
Sbjct: 124 KAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPGLD 183

Query: 99  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGY--ELVGQNECSK 158
           QFMEAYCEML KYEQEL+KPFKEAMVF   +E Q K+L+ SS SS GY    + +N    
Sbjct: 184 QFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNNNGS 243

Query: 159 EIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDW 218
             E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDW
Sbjct: 244 SEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 303

Query: 219 WSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HY 278
           WSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP HY
Sbjct: 304 WSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPLHY 363

Query: 279 YLDNLICNPFSMD 285
           ++ N++ NPF +D
Sbjct: 364 FMGNVLGNPFPID 376

[Close]

BLAST of Carg27156 vs. ExPASy Swiss-Prot
Match: O65034 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH15 PE=2 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 4.6e-75
Identity = 150/262 (57.25%), Postives = 181/262 (69.08%), Query Frame = 0


Query: 36  ETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGD--DPGL 95
           E+ +AK+MAHP +  LLA+Y++CQKVGAPP+V+ RL    T A  + R   R D  DP L
Sbjct: 89  ESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERL--TATAAKLDARPPGRHDARDPEL 148

Query: 96  DQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSS----------SDG-Y 155
           DQFMEAYC ML+KY +ELT+P  EAM F  R+ESQL  +A  +            +DG  
Sbjct: 149 DQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLADGKS 208

Query: 156 ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLP 215
           E VG +E   +    +     IDP+AE+KELK QLL+KYSGYL SL+QEF KKKK GKLP
Sbjct: 209 ECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLP 268

Query: 216 KEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFV 275
           KEARQ+LL WW  HYKWPYPSE++K+ALAESTGLD KQINNWFINQRKRHWKPSEDM FV
Sbjct: 269 KEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFV 328

Query: 276 VMDAAHPHYYLDNLICNPFSMD 285
           +M+  HP       +  PF  D
Sbjct: 329 MMEGFHPQNAAALYMDGPFMAD 348

[Close]

BLAST of Carg27156 vs. ExPASy TrEMBL
Match: A0A6J1ERR4 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111437123 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.5e-161
Identity = 284/290 (97.93%), Postives = 287/290 (98.97%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDH  NNDNNNDSDSNN+KMFLPYNDHV++CR KLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDH--NNDNNNDSDSNNKKMFLPYNDHVQSCRDKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 288

[Close]

BLAST of Carg27156 vs. ExPASy TrEMBL
Match: A0A6J1JKT8 (homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111486097 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.0e-161
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDHN    NNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDHN----NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]

BLAST of Carg27156 vs. ExPASy TrEMBL
Match: A0A6J1C313 (homeobox protein SBH1-like OS=Momordica charantia OX=3673 GN=LOC111008000 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 244/301 (81.06%), Postives = 261/301 (86.71%), Query Frame = 0


Query: 7   MFDHNNNNDNNN---------DSDSNNRKMFLPYNDH-------VETCRAKLMAHPLFPR 66
           + D+NNNN NN           S +     F+P   H         +CRAK+MAHPLFPR
Sbjct: 47  ILDNNNNNVNNKLFVPLSWSATSTAQRVSAFVPQPPHNNSNHNLQNSCRAKIMAHPLFPR 106

Query: 67  LLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQE 126
           LLA+YVNCQKVGAPP+VVARLEQAC VA G+CR  ARGDDP LDQFMEAYCEMLSKYEQE
Sbjct: 107 LLAAYVNCQKVGAPPEVVARLEQACAVAGGSCRATARGDDPALDQFMEAYCEMLSKYEQE 166

Query: 127 LTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEE 186
           L+KPFKEAM+FFSRIESQLKALA SSS+SDG ELVGQ+ECSKE+E VDMNENYIDPQAEE
Sbjct: 167 LSKPFKEAMLFFSRIESQLKALAVSSSTSDGCELVGQSECSKEVE-VDMNENYIDPQAEE 226

Query: 187 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 246
           KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQ+LLDWWSRHYKWPYPSE+QKVAL
Sbjct: 227 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQELLDWWSRHYKWPYPSEAQKVAL 286

Query: 247 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC-NPFSMDCSSTL 291
           AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDN+IC NPFSMDCSSTL
Sbjct: 287 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNNPFSMDCSSTL 346

[Close]

BLAST of Carg27156 vs. ExPASy TrEMBL
Match: A0A0A0K5G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041370 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.3e-128
Identity = 236/288 (81.94%), Postives = 250/288 (86.81%), Query Frame = 0


Query: 11  NNNNDNNNDSDSNNRKMFLPY------NDHV----ETCRAKLMAHPLFPRLLASYVNCQK 70
           +NNN+NNN         FLP       NDHV     T +AK+MAHPLFPRLL +YVNCQK
Sbjct: 61  SNNNNNNNVQTQTPLSAFLPQPHTNNSNDHVVPPTSTSKAKIMAHPLFPRLLTAYVNCQK 120

Query: 71  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 130
           VGAPP+VVARLEQAC VA G+CR    G+DP LDQFMEAYCEML+KYEQELTKPFKEAM+
Sbjct: 121 VGAPPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELTKPFKEAML 180

Query: 131 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 190
           FFSRIESQLKA A    SSDG+ELVGQNECSKEIE VDMNENYIDPQAE KELKGQLLRK
Sbjct: 181 FFSRIESQLKAEAV---SSDGFELVGQNECSKEIE-VDMNENYIDPQAEVKELKGQLLRK 240

Query: 191 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 250
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 241 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 300

Query: 251 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSST 289
           INNWFINQRKRHWKP+EDMQFVVMDA HPHYYLDN+ICNPFSMDCSS+
Sbjct: 301 INNWFINQRKRHWKPTEDMQFVVMDAGHPHYYLDNVICNPFSMDCSSS 344

[Close]

BLAST of Carg27156 vs. ExPASy TrEMBL
Match: A0A1S3C0Z5 (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103495627 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.8e-126
Identity = 232/290 (80.00%), Postives = 248/290 (85.52%), Query Frame = 0


Query: 11  NNNNDNNNDSDSNNRKMFLPY------NDH----VETCRAKLMAHPLFPRLLASYVNCQK 70
           +NNN+NNN         FLP       NDH      T +AK+MAHPLFPRLL +YVNCQK
Sbjct: 61  SNNNNNNNVQTQTPLSTFLPQPHTNNSNDHDAPPTSTSKAKIMAHPLFPRLLTAYVNCQK 120

Query: 71  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 130
           VGAPP+VVARLEQAC VA G+CR    G+DP LDQFMEAYCEML+KYEQELTKPFKEAM+
Sbjct: 121 VGAPPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELTKPFKEAML 180

Query: 131 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 190
           FFSRIESQLKA A    SSDG++LV QN+CSKEIE VDMNENYIDPQAE KELKGQLLRK
Sbjct: 181 FFSRIESQLKAQAV---SSDGFDLVAQNDCSKEIE-VDMNENYIDPQAEVKELKGQLLRK 240

Query: 191 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 250
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 241 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 300

Query: 251 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291
           INNWFINQRKRHWKP+EDMQFVVMD  HPHYYLDN+ICNPFSMDCSS+ F
Sbjct: 301 INNWFINQRKRHWKPTEDMQFVVMDTGHPHYYLDNVICNPFSMDCSSSHF 346

[Close]

BLAST of Carg27156 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-103
Identity = 188/260 (72.31%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 39  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 98
           +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLD 181

Query: 99  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSS-DGY--ELVGQNECS 158
           QFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ SS SS  GY    + +N   
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNG 241

Query: 159 KEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLD 218
              E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLD
Sbjct: 242 SSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 301

Query: 219 WWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-H 278
           WWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP H
Sbjct: 302 WWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH 361

Query: 279 YYLDNLICNPFSMD-CSSTL 290
           Y++DN++ NPF MD  SST+
Sbjct: 362 YFMDNVLGNPFPMDHISSTM 381

[Close]

BLAST of Carg27156 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 272.7 bits (696), Expect = 3.4e-73
Identity = 154/285 (54.04%), Postives = 185/285 (64.91%), Query Frame = 0


Query: 10  HNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVA 69
           HN    NNN++D+ +          VE  +AK++AHP +  LL +Y++CQK+GAPPDVV 
Sbjct: 115 HNTQEANNNNNDNVS---------DVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVD 174

Query: 70  RLEQA-----CTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 129
           R+  A                A   DP LDQFMEAYC+ML KY +ELT+P +EAM F  R
Sbjct: 175 RITAARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRR 234

Query: 130 IESQLKALAAS-----------SSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKEL 189
           IESQL  L  S           S +    +   +N    E E+ +     IDP+AE++EL
Sbjct: 235 IESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQENNSGGETELPE-----IDPRAEDREL 294

Query: 190 KGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAES 249
           K  LL+KYSGYL SLKQE  KKKK GKLPKEARQ+LL WW  HYKWPYPSES+KVALAES
Sbjct: 295 KNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAES 354

Query: 250 TGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPHY---YLD 275
           TGLD KQINNWFINQRKRHWKPSEDMQF+VMD   HPH+   Y+D
Sbjct: 355 TGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMD 385

[Close]

BLAST of Carg27156 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-61
Identity = 120/253 (47.43%), Postives = 164/253 (64.82%), Query Frame = 0


Query: 32  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ--------ACTVAAGNCR 91
           N  +   +AK+  HP +PRLL +Y++CQKVGAPP++   LE+           V   +C 
Sbjct: 79  NVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSC- 138

Query: 92  TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYE 151
               G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L     S+ G  
Sbjct: 139 ---FGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVS 198

Query: 152 LVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKL 211
             G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK GKL
Sbjct: 199 EDGVISSDEELSGGD-HEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKL 258

Query: 212 PKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQF 271
           P+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M F
Sbjct: 259 PREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPF 318

Query: 272 VVMDAAHPHYYLD 275
            +MD +   ++ +
Sbjct: 319 AMMDDSSGSFFTE 326

[Close]

BLAST of Carg27156 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 232.3 bits (591), Expect = 5.1e-61
Identity = 118/248 (47.58%), Postives = 165/248 (66.53%), Query Frame = 0


Query: 32  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR---- 91
           N  +   ++K+ +HPL+PRLL +Y++CQKVGAP ++   LE+         R VA     
Sbjct: 63  NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCF 122

Query: 92  GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQ 151
           G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L    +S+      G 
Sbjct: 123 GADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDGA 182

Query: 152 NECSKEI-EVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEAR 211
               +E+ E  D+  +    ++ +++LK QLLRK+  ++ SLK EF KKKK GKLP+EAR
Sbjct: 183 VSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREAR 242

Query: 212 QQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA 271
           Q LLDWW+ H KWPYP+E  K++LAE TGLD KQINNWFINQRKRHWKPSE+M F +MD 
Sbjct: 243 QALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDD 302

Query: 272 AHPHYYLD 275
           ++  ++ +
Sbjct: 303 SNETFFTE 310

[Close]

BLAST of Carg27156 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-59
Identity = 120/255 (47.06%), Postives = 164/255 (64.31%), Query Frame = 0


Query: 32  NDHVETCRAKLMAHPLFPRLLASYVNCQK--VGAPPDVVARLEQ--------ACTVAAGN 91
           N  +   +AK+  HP +PRLL +Y++CQK  VGAPP++   LE+           V   +
Sbjct: 79  NVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSS 138

Query: 92  CRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDG 151
           C     G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L     S+ G
Sbjct: 139 C----FGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARG 198

Query: 152 YELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNG 211
               G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK G
Sbjct: 199 VSEDGVISSDEELSGGD-HEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKG 258

Query: 212 KLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDM 271
           KLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M
Sbjct: 259 KLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENM 318

Query: 272 QFVVMDAAHPHYYLD 275
            F +MD +   ++ +
Sbjct: 319 PFAMMDDSSGSFFTE 328

The following BLAST results are available for this feature:

BLAST of Carg27156 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022846.1	1.6e-165	100.00	Homeobox protein SBH1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589145.1	8.2e-162	98.62	Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022930731.1	3.1e-161	97.93	homeobox protein knotted-1-like LET6 [Cucurbita moschata]	[more]
XP_022988875.1	4.0e-161	97.93	homeobox protein knotted-1-like LET6 [Cucurbita maxima]	[more]
XP_023529301.1	2.6e-160	97.25	homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27156 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38874	4.4e-102	72.31	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
O22299	1.1e-100	63.39	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]
P46608	1.2e-99	63.31	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
Q9M6D9	4.6e-99	70.75	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=...	[more]
O65034	4.6e-75	57.25	Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]

BLAST of Carg27156 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERR4	1.5e-161	97.93	homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114371...	[more]
A0A6J1JKT8	2.0e-161	97.93	homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111486097...	[more]
A0A6J1C313	1.2e-131	81.06	homeobox protein SBH1-like OS=Momordica charantia OX=3673 GN=LOC111008000 PE=3 S...	[more]
A0A0A0K5G5	8.3e-128	81.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041370 PE=3 SV=1	[more]
A0A1S3C0Z5	7.8e-126	80.00	homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103495627 PE=...	[more]

BLAST of Carg27156 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62360.1	3.1e-103	72.31	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	3.4e-73	54.04	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G23380.1	3.9e-61	47.43	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	5.1e-61	47.58	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G23380.2	1.3e-59	47.06	KNOTTED1-like homeobox gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 172..193 e-value: 1.2E-7 score: 41.4
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 172..193 e-value: 1.2E-10 score: 41.1
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 172..192 score: 11.173647
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 194..259 e-value: 1.4E-11 score: 54.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 192..255 score: 11.920164
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 204..256 e-value: 9.41156E-12 score: 57.2533
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 83..134 e-value: 5.3E-25 score: 99.1
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 88..132 e-value: 2.5E-22 score: 78.1
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 36..80 e-value: 2.4E-15 score: 67.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 38..75 e-value: 3.4E-19 score: 68.3
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 212..251 e-value: 4.7E-17 score: 61.6
None	No IPR available	GENE3D	1.10.10.60		coord: 197..259 e-value: 7.4E-27 score: 94.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	PANTHER	PTHR11850:SF274	HOMEOBOX PROTEIN SBH1-LIKE ISOFORM X1	coord: 16..281
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 16..281
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 230..253
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 194..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27156-RA	Carg27156-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding