Carg27149 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27149
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr11: 12082906 .. 12084288 (-)
RNA-Seq Expression	Carg27149
Synteny	Carg27149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTACTCGTCCGAGTGGCTACTGCAACTTCTTCAACGATTCCTCAAGAACTCAGCTAAAATCCAACAAATCCACGCCCTTTTAATCACCGATGATCATCTCTTGAACAAACCCCAAGCTCCCTCGAATCCAAAATGGATCAGTAGTCTTCTCTATAACGCTCTGATCAGAGCCTATTTGAGCTTCAATCGGCCTTGCTCCACGCTAATTCTCTACACCCAAATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGGTGGAATGGGCGATTTCTTGAGGCCATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCAGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCGATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCTTCTGTTTTGGGAGCTCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAATGGAGTCATGCTGCAGTTATAAGACGAGTAATGGCAGATGCTCGGTATTCAGAAGGCCCCAGCTTATAG

mRNA sequence

ATGCATTACTCGTCCGAGTGGCTACTGCAACTTCTTCAACGATTCCTCAAGAACTCAGCTAAAATCCAACAAATCCACGCCCTTTTAATCACCGATGATCATCTCTTGAACAAACCCCAAGCTCCCTCGAATCCAAAATGGATCAGTAGTCTTCTCTATAACGCTCTGATCAGAGCCTATTTGAGCTTCAATCGGCCTTGCTCCACGCTAATTCTCTACACCCAAATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGGTGGAATGGGCGATTTCTTGAGGCCATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCAGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCGATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCTTCTGTTTTGGGAGCTCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAATGGAGTCATGCTGCAGTTATAAGACGAGTAATGGCAGATGCTCGGTATTCAGAAGGCCCCAGCTTATAG

Coding sequence (CDS)

ATGCATTACTCGTCCGAGTGGCTACTGCAACTTCTTCAACGATTCCTCAAGAACTCAGCTAAAATCCAACAAATCCACGCCCTTTTAATCACCGATGATCATCTCTTGAACAAACCCCAAGCTCCCTCGAATCCAAAATGGATCAGTAGTCTTCTCTATAACGCTCTGATCAGAGCCTATTTGAGCTTCAATCGGCCTTGCTCCACGCTAATTCTCTACACCCAAATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGGTGGAATGGGCGATTTCTTGAGGCCATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCAGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCGATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCTTCTGTTTTGGGAGCTCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAATGGAGTCATGCTGCAGTTATAAGACGAGTAATGGCAGATGCTCGGTATTCAGAAGGCCCCAGCTTATAG

Protein sequence

MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPSL

Homology

[Close]

BLAST of Carg27149 vs. NCBI nr
Match: KAG7022853.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 917.1 bits (2369), Expect = 5.8e-263
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY
Sbjct: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY
Sbjct: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPSL 461
           RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPSL
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPSL 460

[Close]

BLAST of Carg27149 vs. NCBI nr
Match: XP_022930726.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata] >XP_022930727.1 putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata])

HSP 1 Score: 898.3 bits (2320), Expect = 2.8e-257
Identity = 451/459 (98.26%), Postives = 454/459 (98.91%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY
Sbjct: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGF WNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFCWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           REREALELFASMK EGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY
Sbjct: 301 REREALELFASMKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLLGKAGLLREATEFIESMPFQPDA+VLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINAGAEKWSHAAVIRRVMADAR  + P+
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPA 459

[Close]

BLAST of Carg27149 vs. NCBI nr
Match: KAG6589154.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 896.3 bits (2315), Expect = 1.1e-256
Identity = 450/459 (98.04%), Postives = 453/459 (98.69%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M YSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAP NPKWISSLLYNALIR Y
Sbjct: 1   MPYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPLNPKWISSLLYNALIRGY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNA+TFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY
Sbjct: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINAGAEKWSHAAVIRRVMADAR  + P+
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPA 459

[Close]

BLAST of Carg27149 vs. NCBI nr
Match: XP_022988762.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita maxima] >XP_022988763.1 putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita maxima])

HSP 1 Score: 882.1 bits (2278), Expect = 2.1e-252
Identity = 445/459 (96.95%), Postives = 448/459 (97.60%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M YSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY
Sbjct: 1   MPYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNA+TFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGFWWNGRFLEAIGFFEMMMMN EVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNREVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELS FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSAFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           R REALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDF IVPIAEHY
Sbjct: 301 RGREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFLIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLL KAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLAKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINA AEKWS AAVIRRVMADAR  + P+
Sbjct: 421 RHCGRYVTLASINARAEKWSRAAVIRRVMADARIQKAPA 459

[Close]

BLAST of Carg27149 vs. NCBI nr
Match: XP_023529509.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 880.6 bits (2274), Expect = 6.1e-252
Identity = 442/459 (96.30%), Postives = 447/459 (97.39%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M YSSEWLLQLLQRF+KNS KIQQIHALLITDDHLLNKPQAP NPKWISSLLYNALIR Y
Sbjct: 1   MPYSSEWLLQLLQRFIKNSTKIQQIHALLITDDHLLNKPQAPLNPKWISSLLYNALIRGY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGFWWNGRFLEAI FFEMMMMNGEVKP+EATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIRFFEMMMMNGEVKPSEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELC WNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCVWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           REREALELFAS+K EGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY
Sbjct: 301 REREALELFASIKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINAGAEKWS AAVIRRVMADA   + P+
Sbjct: 421 RHCGRYVTLASINAGAEKWSRAAVIRRVMADAGIQKAPA 459

[Close]

BLAST of Carg27149 vs. ExPASy Swiss-Prot
Match: Q9SY75 (Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E71 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.7e-119
Identity = 224/459 (48.80%), Postives = 318/459 (69.28%), Query Frame = 0


Query: 4   SSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAYLSF 63
           S E  L LLQRFL +S +I+QIH +L+T + L+         +W +  +YN LIR+YL+ 
Sbjct: 12  SLEDALHLLQRFLYSSNQIKQIHTVLLTSNALVAS-------RWKTKCVYNTLIRSYLTT 71

Query: 64  NRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATIS-SPLLGKLIHAHAVKIGVVSDPFVL 123
               ++L L+T MLA   +PN  TFPS+IK+A  S S   G  +H  A+K G + DPFV 
Sbjct: 72  GEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 131

Query: 124 TSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVV 183
           TSFV FY E+ +L ++RK+FD+I +PC+VA NSLLDA  +NG+M  A   F+ M   DVV
Sbjct: 132 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 191

Query: 184 SWTSIVHGFWWNGRFLEAIGFFEMMMMN--GEVKPNEATYVSVLSSCANLAAEGVLCRGK 243
           SWT++++GF   G   +A+  F  M+ N    + PNEAT+VSVLSSCAN    G+   GK
Sbjct: 192 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GK 251

Query: 244 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 303
           +IH Y++  E  L+  +GTAL+D YGK G L  A T+F+Q++++++CAWNA+IS+L+SNG
Sbjct: 252 QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNG 311

Query: 304 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 363
           R ++ALE+F  MK   + PN +T +AILTACAR KLV+ G++LF S+ +++ I+P +EHY
Sbjct: 312 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 371

Query: 364 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 423
            C+VDL+G+AGLL +A  FI+S+PF+PDASVLGALL AC IH  TELGN VG++L+ +QP
Sbjct: 372 GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQP 431

Query: 424 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           +HCG+YV L++ NA    WS A  +R+ M +A   + P+
Sbjct: 432 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462

[Close]

BLAST of Carg27149 vs. ExPASy Swiss-Prot
Match: P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 8.9e-81
Identity = 164/417 (39.33%), Postives = 253/417 (60.67%), Query Frame = 0


Query: 36  LNKPQAPSNPKWISSLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSA 95
           L+K   P N  W      N +IR + +   P  ++ +Y QML     P+  T+P ++KS+
Sbjct: 65  LSKLSDPPNYGW------NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 124

Query: 96  T-ISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFN 155
           + +S+  LG  +H   VK G+  D F+  + +  Y   R+  +ARK+FDE+    +V +N
Sbjct: 125 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 184

Query: 156 SLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVK 215
           S+LDA+ K+GD+ SA L F  M +RDVV+W+S++ G+   G + +A+  F+ MM  G  K
Sbjct: 185 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 244

Query: 216 PNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSA 275
            NE T VSV+ +CA+L   G L RGK +H YI+     L+V + T+L+D Y K G +G A
Sbjct: 245 ANEVTMVSVICACAHL---GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 304

Query: 276 RTVFNQ--MKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACA 335
            +VF +  +K  +   WNA+I  L+S+G  RE+L+LF  M+   I P+E+TF+ +L AC+
Sbjct: 305 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 364

Query: 336 RGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVL 395
            G LV+     F+S+  +    P +EHY CMVD+L +AGL+++A +FI  MP +P  S+L
Sbjct: 365 HGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML 424

Query: 396 GALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVM 450
           GALLN C  HG  EL   VG++L+ +QP + GRYV LA++ A  +++  A  +R  M
Sbjct: 425 GALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAM 471

[Close]

BLAST of Carg27149 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 4.4e-80
Identity = 160/410 (39.02%), Postives = 243/410 (59.27%), Query Frame = 0


Query: 50  SLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKS-ATISSPLLGKLIHA 109
           + L+N +IR +   + P  +L+LY +ML      NAYTFPS++K+ + +S+      IHA
Sbjct: 80  TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139

Query: 110 HAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGS 169
              K+G  +D + + S ++ YA       A  +FD I +P  V++NS++  +VK G M  
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199

Query: 170 AVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCA 229
           A+  FR M +++ +SWT+++ G+       EA+  F   M N +V+P+  +  + LS+CA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH-EMQNSDVEPDNVSLANALSACA 259

Query: 230 NLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCA 289
            L   G L +GK IH+Y+ +    +   +G  L+D Y K G +  A  VF  +K + + A
Sbjct: 260 QL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 319

Query: 290 WNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMS 349
           W A+IS  + +G  REA+  F  M+  GI+PN +TF A+LTAC+   LVE G  +F SM 
Sbjct: 320 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 379

Query: 350 NDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELG 409
            D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC IH   ELG
Sbjct: 380 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 439

Query: 410 NEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGP 459
            E+G  L+ + P H GRYV  A+I+A  +KW  AA  RR+M +   ++ P
Sbjct: 440 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485

[Close]

BLAST of Carg27149 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 9.2e-78
Identity = 156/402 (38.81%), Postives = 241/402 (59.95%), Query Frame = 0


Query: 50  SLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSII-KSATISSPLLGKLIHA 109
           + LYN LI+AY   ++P  +++LY  +     +P+ +TF  I   SA+ SS    +L+H+
Sbjct: 47  TFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106

Query: 110 HAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGS 169
              + G  SD F  T+ ++ YA+L  L  AR+VFDE++   +  +N+++  + + GDM +
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166

Query: 170 AVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCA 229
           A+  F SM +++V SWT+++ GF  NG + EA+  F  M  +  VKPN  T VSVL +CA
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226

Query: 230 NLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKN-RELC 289
           NL   G L  G+ +  Y   N    ++++  A ++ Y K G++  A+ +F ++ N R LC
Sbjct: 227 NL---GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 286

Query: 290 AWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSM 349
           +WN+MI SL+++G+  EAL LFA M  EG +P+ VTFV +L AC  G +V  G ELF+SM
Sbjct: 287 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 346

Query: 350 SNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATEL 409
                I P  EHY CM+DLLG+ G L+EA + I++MP +PDA V G LL AC+ HG  E+
Sbjct: 347 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 406

Query: 410 GNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVM 450
                  L  ++P + G  V +++I A  EKW     +R++M
Sbjct: 407 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLM 445

[Close]

BLAST of Carg27149 vs. ExPASy Swiss-Prot
Match: Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-73
Identity = 156/431 (36.19%), Postives = 245/431 (56.84%), Query Frame = 0


Query: 52  LYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAV 111
           +YNAL + +++ + P  +L LY +ML     P++YT+ S++K+++ +S   G+ + AH  
Sbjct: 93  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS-RFGESLQAHIW 152

Query: 112 KIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVK--------- 171
           K G      + T+ + FY+    +  ARKVFDE+ +   +A+ +++ A+ +         
Sbjct: 153 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 212

Query: 172 -----------------NGDMGSAVLK-----FRSMKKRDVVSWTSIVHGFWWNGRFLEA 231
                            NG MG   L+     F  M  +D++SWT+++ G+  N R+ EA
Sbjct: 213 LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 272

Query: 232 IGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTA 291
           I  F  MM  G + P+E T  +V+S+CA+L   GVL  GKE+H Y ++N   L V+IG+A
Sbjct: 273 IAVFYKMMEEG-IIPDEVTMSTVISACAHL---GVLEIGKEVHMYTLQNGFVLDVYIGSA 332

Query: 292 LVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPN 351
           LVD Y K G L  A  VF  +  + L  WN++I  L+++G  +EAL++FA M++E ++PN
Sbjct: 333 LVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 392

Query: 352 EVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFI 411
            VTFV++ TAC    LV+ G  ++RSM +D+SIV   EHY  MV L  KAGL+ EA E I
Sbjct: 393 AVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELI 452

Query: 412 ESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWS 452
            +M F+P+A + GALL+ C IH    +      +L+V++P + G Y  L S+ A   +W 
Sbjct: 453 GNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWR 512

[Close]

BLAST of Carg27149 vs. ExPASy TrEMBL
Match: A0A6J1ERE5 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita moschata OX=3662 GN=LOC111437118 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.4e-257
Identity = 451/459 (98.26%), Postives = 454/459 (98.91%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY
Sbjct: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGF WNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFCWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           REREALELFASMK EGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY
Sbjct: 301 REREALELFASMKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLLGKAGLLREATEFIESMPFQPDA+VLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINAGAEKWSHAAVIRRVMADAR  + P+
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPA 459

[Close]

BLAST of Carg27149 vs. ExPASy TrEMBL
Match: A0A6J1JN92 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxima OX=3661 GN=LOC111486006 PE=4 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 1.0e-252
Identity = 445/459 (96.95%), Postives = 448/459 (97.60%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M YSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY
Sbjct: 1   MPYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFNRPCSTLILYTQMLAHRTKPNA+TFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTSIVHGFWWNGRFLEAIGFFEMMMMN EVKPNEATYVSVLSSCANLAAEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNREVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIHAYIIRNEGELS FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG
Sbjct: 241 EIHAYIIRNEGELSAFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           R REALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDF IVPIAEHY
Sbjct: 301 RGREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFLIVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VCMVDLL KAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP
Sbjct: 361 VCMVDLLAKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLASINA AEKWS AAVIRRVMADAR  + P+
Sbjct: 421 RHCGRYVTLASINARAEKWSRAAVIRRVMADARIQKAPA 459

[Close]

BLAST of Carg27149 vs. ExPASy TrEMBL
Match: A0A1S3C130 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo OX=3656 GN=LOC103495611 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 3.0e-212
Identity = 371/459 (80.83%), Postives = 407/459 (88.67%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M +SSEWLLQLLQRFLKNS KI QIHALL+T  HL N  Q  SNPK +++LLYN LIRAY
Sbjct: 1   MSHSSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLTTLLYNTLIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           L+ NRP   L+LYTQML+ +TKPN +TFPSIIKSATI SPLL KLIHAHA KIGV++DP 
Sbjct: 61  LTLNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATIYSPLLPKLIHAHAFKIGVLTDPV 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           VLTSFVS Y +LRELGNARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAV  FR M +RD
Sbjct: 121 VLTSFVSSYGDLRELGNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVFMFRYMPERD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTS+V+GFWWNGRFLEA+ FF+MMMM+G VKPNEATYVSVLSSCANL AEGVLCRGK
Sbjct: 181 VVSWTSVVNGFWWNGRFLEALWFFQMMMMSGSVKPNEATYVSVLSSCANLDAEGVLCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           E+HAYIIRNEGE SVFIGTAL+DFYGKMGLLG ARTVFNQMK RE+C WNAMISS +SN 
Sbjct: 241 EVHAYIIRNEGEFSVFIGTALIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNS 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           RE EAL+LFA+MKVEGI PNEVTFVAILTACARGKLV+ GL+LF+SM  DFSIVPI EHY
Sbjct: 301 RETEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
           VC+VDLLGKAGLLREATE IESMPF PDASVLGALL+AC IHGA ELGNEVGRRLLVMQP
Sbjct: 361 VCVVDLLGKAGLLREATEIIESMPFDPDASVLGALLSACKIHGAIELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           RHCGRYVTLAS+NAGAEKW+ AAVIR VMADAR  + P+
Sbjct: 421 RHCGRYVTLASMNAGAEKWNRAAVIRSVMADARIQKTPA 459

[Close]

BLAST of Carg27149 vs. ExPASy TrEMBL
Match: A0A0A0K5I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 1.1e-209
Identity = 367/457 (80.31%), Postives = 404/457 (88.40%), Query Frame = 0


Query: 3   YSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAYLS 62
           + SEWLLQLLQRFLKNS KI QIHALL+T  HL N  Q  SNPK + +LLYN LIRAYL+
Sbjct: 5   HPSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLITLLYNTLIRAYLN 64

Query: 63  FNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVL 122
           FNRP   L+LYTQML+ +TKPN +TFPSIIKSATI S LL KLIHAHA KIGV++DP VL
Sbjct: 65  FNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATICSSLLPKLIHAHAFKIGVLTDPVVL 124

Query: 123 TSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVV 182
           TSFVS YA+LREL NARKVFDEIT+PCIVAFNS+LDAFVKNGD+GSAV  FRSM + DVV
Sbjct: 125 TSFVSSYADLRELANARKVFDEITNPCIVAFNSMLDAFVKNGDLGSAVFMFRSMPEHDVV 184

Query: 183 SWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEI 242
           SWTS+++GFWWNGRFLEA+ FF +MMM+G VKPNEATYVSVLSS ANL AEGVLCRGKE+
Sbjct: 185 SWTSVINGFWWNGRFLEALWFFHVMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEV 244

Query: 243 HAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGRE 302
           HAYIIRNEGE SVFIGT L+DFYGKMGLLG ARTVFNQMK RE+C WNAMISS +SNGRE
Sbjct: 245 HAYIIRNEGEFSVFIGTGLIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRE 304

Query: 303 REALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVC 362
            EAL+LFA+MKVEGI PNEVTFVAILTACARGKLV+ GL+LF+SM  DFSIVPI EHYVC
Sbjct: 305 TEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVC 364

Query: 363 MVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQPRH 422
           +VDLLGKAGLLREATEFIESMPF PDASVLGALL+AC IHGATELGNEVGRRLL MQPRH
Sbjct: 365 VVDLLGKAGLLREATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRH 424

Query: 423 CGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           CGRYVTLAS+NAGAEKW+ AAVIRRVMADAR  + P+
Sbjct: 425 CGRYVTLASMNAGAEKWNRAAVIRRVMADARIQKTPA 461

[Close]

BLAST of Carg27149 vs. ExPASy TrEMBL
Match: A0A6J1C5N6 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Momordica charantia OX=3673 GN=LOC111007611 PE=4 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 2.4e-206
Identity = 362/459 (78.87%), Postives = 402/459 (87.58%), Query Frame = 0


Query: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60
           M +SSEWLLQLLQRFLKNS KIQQIHALLIT  HLL   +AP NPKWI++LL+N LIRAY
Sbjct: 1   MPHSSEWLLQLLQRFLKNSIKIQQIHALLITGSHLLCNSKAPPNPKWINTLLFNTLIRAY 60

Query: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120
           LSFN+P S L+LYT ML+H   PNA+TFPSIIKSA +SS  LGKLIHAHAVKIGV+SDPF
Sbjct: 61  LSFNQPRSALLLYTHMLSHHANPNAHTFPSIIKSAAVSSRFLGKLIHAHAVKIGVLSDPF 120

Query: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180
           V TSFV +Y+E+ EL +ARKVFDEI +PCIVA NS+LDAFVKNGD+GSAVL F SM +RD
Sbjct: 121 VQTSFVGYYSEVGELDDARKVFDEIPNPCIVALNSMLDAFVKNGDLGSAVLMFESMGERD 180

Query: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240
           VVSWTS+V+GF WNGRFLEAI FFE MMM   VKPNEAT+VSVLSSCANL AEG LCRGK
Sbjct: 181 VVSWTSVVNGFLWNGRFLEAIWFFE-MMMRSSVKPNEATFVSVLSSCANLDAEGALCRGK 240

Query: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300
           EIH YIIRNEGELSVF+GTAL+DFYGKMG LGSA  VFNQMKNRE+CAWNAMISS +SNG
Sbjct: 241 EIHGYIIRNEGELSVFVGTALIDFYGKMGFLGSATNVFNQMKNREICAWNAMISSFASNG 300

Query: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360
           RE EAL+LFA MK +GI PNEVTFVAILTACARGKLVE GL+LF+SMSN+F++VPIAEHY
Sbjct: 301 RETEALDLFAEMKAKGIHPNEVTFVAILTACARGKLVELGLQLFQSMSNNFALVPIAEHY 360

Query: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420
            C+VDLLGKAGLLREATEFI+SMPF+P  SVLGALL+AC IHGATELGNEVGRRLL MQP
Sbjct: 361 ACVVDLLGKAGLLREATEFIKSMPFEPAGSVLGALLSACKIHGATELGNEVGRRLLTMQP 420

Query: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           +HCGRYV LASINA AEKWSHAA IRRVMADA   + P+
Sbjct: 421 QHCGRYVALASINAEAEKWSHAAGIRRVMADAGIQKAPA 458

[Close]

BLAST of Carg27149 vs. TAIR 10
Match: AT1G10330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 431.0 bits (1107), Expect = 1.2e-120
Identity = 224/459 (48.80%), Postives = 318/459 (69.28%), Query Frame = 0


Query: 4   SSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAYLSF 63
           S E  L LLQRFL +S +I+QIH +L+T + L+         +W +  +YN LIR+YL+ 
Sbjct: 12  SLEDALHLLQRFLYSSNQIKQIHTVLLTSNALVAS-------RWKTKCVYNTLIRSYLTT 71

Query: 64  NRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATIS-SPLLGKLIHAHAVKIGVVSDPFVL 123
               ++L L+T MLA   +PN  TFPS+IK+A  S S   G  +H  A+K G + DPFV 
Sbjct: 72  GEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 131

Query: 124 TSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVV 183
           TSFV FY E+ +L ++RK+FD+I +PC+VA NSLLDA  +NG+M  A   F+ M   DVV
Sbjct: 132 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 191

Query: 184 SWTSIVHGFWWNGRFLEAIGFFEMMMMN--GEVKPNEATYVSVLSSCANLAAEGVLCRGK 243
           SWT++++GF   G   +A+  F  M+ N    + PNEAT+VSVLSSCAN    G+   GK
Sbjct: 192 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GK 251

Query: 244 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 303
           +IH Y++  E  L+  +GTAL+D YGK G L  A T+F+Q++++++CAWNA+IS+L+SNG
Sbjct: 252 QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNG 311

Query: 304 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 363
           R ++ALE+F  MK   + PN +T +AILTACAR KLV+ G++LF S+ +++ I+P +EHY
Sbjct: 312 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 371

Query: 364 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 423
            C+VDL+G+AGLL +A  FI+S+PF+PDASVLGALL AC IH  TELGN VG++L+ +QP
Sbjct: 372 GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQP 431

Query: 424 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGPS 460
           +HCG+YV L++ NA    WS A  +R+ M +A   + P+
Sbjct: 432 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462

[Close]

BLAST of Carg27149 vs. TAIR 10
Match: AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 302.4 bits (773), Expect = 6.3e-82
Identity = 164/417 (39.33%), Postives = 253/417 (60.67%), Query Frame = 0


Query: 36  LNKPQAPSNPKWISSLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSA 95
           L+K   P N  W      N +IR + +   P  ++ +Y QML     P+  T+P ++KS+
Sbjct: 65  LSKLSDPPNYGW------NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 124

Query: 96  T-ISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFN 155
           + +S+  LG  +H   VK G+  D F+  + +  Y   R+  +ARK+FDE+    +V +N
Sbjct: 125 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 184

Query: 156 SLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVK 215
           S+LDA+ K+GD+ SA L F  M +RDVV+W+S++ G+   G + +A+  F+ MM  G  K
Sbjct: 185 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 244

Query: 216 PNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSA 275
            NE T VSV+ +CA+L   G L RGK +H YI+     L+V + T+L+D Y K G +G A
Sbjct: 245 ANEVTMVSVICACAHL---GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 304

Query: 276 RTVFNQ--MKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACA 335
            +VF +  +K  +   WNA+I  L+S+G  RE+L+LF  M+   I P+E+TF+ +L AC+
Sbjct: 305 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 364

Query: 336 RGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVL 395
            G LV+     F+S+  +    P +EHY CMVD+L +AGL+++A +FI  MP +P  S+L
Sbjct: 365 HGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML 424

Query: 396 GALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVM 450
           GALLN C  HG  EL   VG++L+ +QP + GRYV LA++ A  +++  A  +R  M
Sbjct: 425 GALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAM 471

[Close]

BLAST of Carg27149 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 3.1e-81
Identity = 160/410 (39.02%), Postives = 243/410 (59.27%), Query Frame = 0


Query: 50  SLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKS-ATISSPLLGKLIHA 109
           + L+N +IR +   + P  +L+LY +ML      NAYTFPS++K+ + +S+      IHA
Sbjct: 80  TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139

Query: 110 HAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGS 169
              K+G  +D + + S ++ YA       A  +FD I +P  V++NS++  +VK G M  
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199

Query: 170 AVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCA 229
           A+  FR M +++ +SWT+++ G+       EA+  F   M N +V+P+  +  + LS+CA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH-EMQNSDVEPDNVSLANALSACA 259

Query: 230 NLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCA 289
            L   G L +GK IH+Y+ +    +   +G  L+D Y K G +  A  VF  +K + + A
Sbjct: 260 QL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 319

Query: 290 WNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMS 349
           W A+IS  + +G  REA+  F  M+  GI+PN +TF A+LTAC+   LVE G  +F SM 
Sbjct: 320 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 379

Query: 350 NDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELG 409
            D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC IH   ELG
Sbjct: 380 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 439

Query: 410 NEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADARYSEGP 459
            E+G  L+ + P H GRYV  A+I+A  +KW  AA  RR+M +   ++ P
Sbjct: 440 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485

[Close]

BLAST of Carg27149 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 6.6e-79
Identity = 156/402 (38.81%), Postives = 241/402 (59.95%), Query Frame = 0


Query: 50  SLLYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSII-KSATISSPLLGKLIHA 109
           + LYN LI+AY   ++P  +++LY  +     +P+ +TF  I   SA+ SS    +L+H+
Sbjct: 47  TFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106

Query: 110 HAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGS 169
              + G  SD F  T+ ++ YA+L  L  AR+VFDE++   +  +N+++  + + GDM +
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166

Query: 170 AVLKFRSMKKRDVVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCA 229
           A+  F SM +++V SWT+++ GF  NG + EA+  F  M  +  VKPN  T VSVL +CA
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226

Query: 230 NLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKN-RELC 289
           NL   G L  G+ +  Y   N    ++++  A ++ Y K G++  A+ +F ++ N R LC
Sbjct: 227 NL---GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 286

Query: 290 AWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSM 349
           +WN+MI SL+++G+  EAL LFA M  EG +P+ VTFV +L AC  G +V  G ELF+SM
Sbjct: 287 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 346

Query: 350 SNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATEL 409
                I P  EHY CM+DLLG+ G L+EA + I++MP +PDA V G LL AC+ HG  E+
Sbjct: 347 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 406

Query: 410 GNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVM 450
                  L  ++P + G  V +++I A  EKW     +R++M
Sbjct: 407 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLM 445

[Close]

BLAST of Carg27149 vs. TAIR 10
Match: AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 1.3e-74
Identity = 156/431 (36.19%), Postives = 245/431 (56.84%), Query Frame = 0


Query: 52   LYNALIRAYLSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAV 111
            +YNAL + +++ + P  +L LY +ML     P++YT+ S++K+++ +S   G+ + AH  
Sbjct: 838  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS-RFGESLQAHIW 897

Query: 112  KIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVK--------- 171
            K G      + T+ + FY+    +  ARKVFDE+ +   +A+ +++ A+ +         
Sbjct: 898  KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 957

Query: 172  -----------------NGDMGSAVLK-----FRSMKKRDVVSWTSIVHGFWWNGRFLEA 231
                             NG MG   L+     F  M  +D++SWT+++ G+  N R+ EA
Sbjct: 958  LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1017

Query: 232  IGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTA 291
            I  F  MM  G + P+E T  +V+S+CA+L   GVL  GKE+H Y ++N   L V+IG+A
Sbjct: 1018 IAVFYKMMEEG-IIPDEVTMSTVISACAHL---GVLEIGKEVHMYTLQNGFVLDVYIGSA 1077

Query: 292  LVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPN 351
            LVD Y K G L  A  VF  +  + L  WN++I  L+++G  +EAL++FA M++E ++PN
Sbjct: 1078 LVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 1137

Query: 352  EVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFI 411
             VTFV++ TAC    LV+ G  ++RSM +D+SIV   EHY  MV L  KAGL+ EA E I
Sbjct: 1138 AVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELI 1197

Query: 412  ESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWS 452
             +M F+P+A + GALL+ C IH    +      +L+V++P + G Y  L S+ A   +W 
Sbjct: 1198 GNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWR 1257

The following BLAST results are available for this feature:

BLAST of Carg27149 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022853.1	5.8e-263	100.00	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022930726.1	2.8e-257	98.26	putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moscha...	[more]
KAG6589154.1	1.1e-256	98.04	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022988762.1	2.1e-252	96.95	putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita maxima...	[more]
XP_023529509.1	6.1e-252	96.30	putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita pepo s...	[more]

BLAST of Carg27149 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY75	1.7e-119	48.80	Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis th...	[more]
P0C8Q7	8.9e-81	39.33	Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	4.4e-80	39.02	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FNN7	9.2e-78	38.81	Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX...	[more]
Q56X05	1.8e-73	36.19	Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg27149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERE5	1.4e-257	98.26	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita mosc...	[more]
A0A6J1JN92	1.0e-252	96.95	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxi...	[more]
A0A1S3C130	3.0e-212	80.83	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo O...	[more]
A0A0A0K5I5	1.1e-209	80.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1	[more]
A0A6J1C5N6	2.4e-206	78.87	putative pentatricopeptide repeat-containing protein At1g10330 OS=Momordica char...	[more]

BLAST of Carg27149 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10330.1	1.2e-120	48.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G08305.1	6.3e-82	39.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	3.1e-81	39.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G08510.1	6.6e-79	38.81	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G06150.1	1.3e-74	36.19	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 148..236 e-value: 2.2E-16 score: 62.2 coord: 48..147 e-value: 5.2E-6 score: 28.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 286..457 e-value: 2.4E-30 score: 108.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 151..182 e-value: 4.4E-5 score: 21.4 coord: 288..321 e-value: 1.2E-8 score: 32.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 179..229 e-value: 1.1E-7 score: 31.9 coord: 287..333 e-value: 3.7E-11 score: 43.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 259..284 e-value: 0.054 score: 13.8 coord: 359..383 e-value: 0.081 score: 13.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 9.20755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 11.608074
None	No IPR available	PANTHER	PTHR47929:SF1	SUBFAMILY NOT NAMED	coord: 46..458
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 46..458

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27149-RA	Carg27149-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016757	glycosyltransferase activity
molecular_function	GO:0005515	protein binding