Carg27132 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTTGCTGCCACTTCGTAA ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTTGCTGCCACTTCGTAA ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTTGCTGCCACTTCGTAA MGQPYEPEEGQPGAGLRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKCIAMVKKMKEYYTRLMKDIIEAGAYAHSYQHRVLLETSFAIPILGVSLSTHSSVLAATS Homology
BLAST of Carg27132 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg27132 vs. NCBI nr
Match: KAG6581768.1 (hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 117/121 (96.69%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Carg27132 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata]) HSP 1 Score: 213.8 bits (543), Expect = 8.1e-52 Identity = 115/125 (92.00%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Carg27132 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 9.9e-42 Identity = 98/124 (79.03%), Postives = 108/124 (87.10%), Query Frame = 0
BLAST of Carg27132 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35 Identity = 91/122 (74.59%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of Carg27132 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.9e-52 Identity = 115/125 (92.00%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Carg27132 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.7e-36 Identity = 91/122 (74.59%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of Carg27132 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32 Identity = 79/104 (75.96%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Carg27132 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32 Identity = 81/104 (77.88%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of Carg27132 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.9e-24 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of Carg27132 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12 Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 0
BLAST of Carg27132 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 37/92 (40.22%), Postives = 60/92 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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