Carg27127 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAATTTGAACACACAAGAGCCCTTCAGATCTGAAACAACTTACAATTCCACCATGTCTAACCCGTCGGACAGCGCCGCCGCCGCCTGCCGGAGGTCCGGTCGGGCACCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGCTGAGTCAGTACTTGAAGGAGAAGAGAAGCCTTGGAATTACCCCTAGAATTGAACCAAAAGGTACTTTAGCTATCTGAGTTTTGAAATTCTTTAGCTAATTCAAACCAATTTGCAGCCGATCGGTGCTAACTTTGTTGTTCTTTTGATTGCTCTGTTCAGATGAGTTTCCGGACGGCTCGGCCGCCGGCGATTATGAACCTGTTGACAAACATGGAAAACCCAGAAGAGAAGAGGCGGTGGGGCTTTTTCTGCCGCCGTCTGCCACGCAGATGACCATTTTTACTGCGGAAAAGTGCTGGTGTTCAAATGATCTTCCTCGGAGAAGGCGGAGGGAGATATGA AAAGAAATTTGAACACACAAGAGCCCTTCAGATCTGAAACAACTTACAATTCCACCATGTCTAACCCGTCGGACAGCGCCGCCGCCGCCTGCCGGAGGTCCGGTCGGGCACCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGCTGAGTCAGTACTTGAAGGAGAAGAGAAGCCTTGGAATTACCCCTAGAATTGAACCAAAAGATGAGTTTCCGGACGGCTCGGCCGCCGGCGATTATGAACCTGTTGACAAACATGGAAAACCCAGAAGAGAAGAGGCGGTGGGGCTTTTTCTGCCGCCGTCTGCCACGCAGATGACCATTTTTACTGCGGAAAAGTGCTGGTGTTCAAATGATCTTCCTCGGAGAAGGCGGAGGGAGATATGA ATGTCTAACCCGTCGGACAGCGCCGCCGCCGCCTGCCGGAGGTCCGGTCGGGCACCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGCTGAGTCAGTACTTGAAGGAGAAGAGAAGCCTTGGAATTACCCCTAGAATTGAACCAAAAGATGAGTTTCCGGACGGCTCGGCCGCCGGCGATTATGAACCTGTTGACAAACATGGAAAACCCAGAAGAGAAGAGGCGGTGGGGCTTTTTCTGCCGCCGTCTGCCACGCAGATGACCATTTTTACTGCGGAAAAGTGCTGGTGTTCAAATGATCTTCCTCGGAGAAGGCGGAGGGAGATATGA MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSNDLPRRRRREI Homology
BLAST of Carg27127 vs. NCBI nr
Match: KAG7018223.1 (hypothetical protein SDJN02_20091 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Carg27127 vs. NCBI nr
Match: XP_022955789.1 (protein TIFY 10b-like [Cucurbita moschata]) HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32 Identity = 79/110 (71.82%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of Carg27127 vs. NCBI nr
Match: XP_023527028.1 (protein TIFY 10b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145.2 bits (365), Expect = 3.3e-31 Identity = 78/110 (70.91%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of Carg27127 vs. NCBI nr
Match: KAG6581773.1 (Protein TIFY 10b, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.0 bits (354), Expect = 6.3e-30 Identity = 76/110 (69.09%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Carg27127 vs. NCBI nr
Match: KAG7018227.1 (Protein TIFY 10b [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140.6 bits (353), Expect = 8.2e-30 Identity = 77/110 (70.00%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of Carg27127 vs. ExPASy TrEMBL
Match: A0A6J1GXA0 (protein TIFY 10b-like OS=Cucurbita moschata OX=3662 GN=LOC111457672 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32 Identity = 79/110 (71.82%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of Carg27127 vs. ExPASy TrEMBL
Match: A0A6J1IS28 (protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111480006 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26 Identity = 74/114 (64.91%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of Carg27127 vs. ExPASy TrEMBL
Match: A0A6J1GBZ2 (protein TIFY 10b-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452772 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 6.1e-23 Identity = 72/114 (63.16%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Carg27127 vs. ExPASy TrEMBL
Match: A0A6J1GBZ3 (protein TIFY 10b-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452772 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 6.1e-23 Identity = 72/114 (63.16%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Carg27127 vs. ExPASy TrEMBL
Match: A0A6J1K9M8 (protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111492925 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22 Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Carg27127 vs. TAIR 10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5 ) HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04 Identity = 43/130 (33.08%), Postives = 62/130 (47.69%), Query Frame = 0
BLAST of Carg27127 vs. TAIR 10
Match: AT1G72450.1 (jasmonate-zim-domain protein 6 ) HSP 1 Score: 42.7 bits (99), Expect = 2.2e-04 Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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