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Carg27075 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAACGAAAGTTTTCATCTTCACGCGGATTTAAAGAATAAAAATTGTTTAATTCCAAAATAACGAAGCTTAAGATATCACTCCCCGTTAAAATTTTACAAAATAAAACTCAAATTACAAAAGATCCAAATGTTACTTTCAGCAATTATAAATAAAATATGAAAGGAAACACAAAAAATTCTTTTGCCCTAATCTTCGTCTTTTTGTTTTTGATTCTCTTTTAGACAGTCCTTCGTACCGTTACGCTCTCTCTGTTTTTCTCTTCCTCATCCACCTTCGCAGCCAGCAGTTGAGAGGGATATCCACACCAGGTCTTCCGTTTTCTCGTATCCATATCTTTTGATATTATATCGTTTCTTTATCCTTCTTTTACTTTCCGTTTCTTCGTCTTCTGATTTTTTTGGTTCAAATTTCTCAACTGCTGTGATTTGGGAAGACTGACAGCGTTTTTTGGTTCGTTTTGGCTCACCAGAAACTTACGGAAATGAAATTTTTAAAAATACTACATTAAACAAAAGGAATTTGTTTCTGTTTGGTTTAGTTTGGACTATTAATTTTGCATCCTTATGCCCTTAGTCTACGATGCTTATAAATGGCTGTTCATATTCATATTTGCTTTAGATTTAAGAAATCCACTATGTACTTGAATCTTTTTCAATTTCTAGCTTTTACATAATGATTCCTTTGTGAATCCTCATTATTGTATAGACGTTCATTACCTCAATGGATTCTCAATTTCATTTTTGAGACGTGCAGATTTTTCTGTTTGAGCCCTTGTTCCTTTAACTATGGGGGTGTGTCATAGTTCATTTGAAATATATATTTAGTGGCTGTTAAATGAAAATTGCACATAAGTTCTTCTATGTTCGGTGATGGTCCTGAATAAATTTGACTACTTATATCTGATTAGCTATAACAAGTTGGTTGTGCAGATAGAAGAAAACCAGAGATGAGTATTGGTGGTGAAAAAGGTTCTGCATCAACAAAGACACCAGCAGACTTCTCAAATCAATTCGGGGCCATCCTGTAG ATGGTCAACGAAAACAGTCCTTCGTACCGTTACGCTCTCTCTGTTTTTCTCTTCCTCATCCACCTTCGCAGCCAGCAGTTGAGAGGGATATCCACACCAGATAGAAGAAAACCAGAGATGAGTATTGGTGGTGAAAAAGGTTCTGCATCAACAAAGACACCAGCAGACTTCTCAAATCAATTCGGGGCCATCCTGTAG ATGGTCAACGAAAACAGTCCTTCGTACCGTTACGCTCTCTCTGTTTTTCTCTTCCTCATCCACCTTCGCAGCCAGCAGTTGAGAGGGATATCCACACCAGATAGAAGAAAACCAGAGATGAGTATTGGTGGTGAAAAAGGTTCTGCATCAACAAAGACACCAGCAGACTTCTCAAATCAATTCGGGGCCATCCTGTAG MVNENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFSNQFGAIL Homology
BLAST of Carg27075 vs. NCBI nr
Match: KAG7030534.1 (hypothetical protein SDJN02_04571, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Carg27075 vs. NCBI nr
Match: KAG6599859.1 (Sm-like protein LSM36B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.5 bits (267), Expect = 4.5e-20 Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg27075 vs. NCBI nr
Match: XP_023539899.1 (uncharacterized protein LOC111800438 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 103.6 bits (257), Expect = 6.6e-19 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0
BLAST of Carg27075 vs. NCBI nr
Match: XP_022988243.1 (uncharacterized protein LOC111485552 [Cucurbita maxima]) HSP 1 Score: 103.2 bits (256), Expect = 8.6e-19 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of Carg27075 vs. ExPASy TrEMBL
Match: A0A6J1JLP5 (uncharacterized protein LOC111485552 OS=Cucurbita maxima OX=3661 GN=LOC111485552 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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