Carg27073 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg27073
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr04: 54734 .. 54911 (+)
RNA-Seq ExpressionCarg27073
SyntenyCarg27073
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACCTTTTGGATTTTTCTTTTATTGTAATTACCGATCTGACTGCTTTCACCTCTTCTTTGTGTTCTTTCTTAAACTTTGTAGCAAAATCGTTTCATTCTCAGCTGGAAAAGTTGTGTTCTCCTCCCATTGTGCAAGAGAGCGACTCCTCTATTGTCAATTTTTAAATGTGTA

mRNA sequence

ATGATGAACCTTTTGGATTTTTCTTTTATTGTAATTACCGATCTGACTGCTTTCACCTCTTCTTTGTGTTCTTTCTTAAACTTTGTAGCAAAATCGTTTCATTCTCAGCTGGAAAAGTTGTGTTCTCCTCCCATTGTGCAAGAGAGCGACTCCTCTATTGTCAATTTTTAAATGTGTA

Coding sequence (CDS)

ATGATGAACCTTTTGGATTTTTCTTTTATTGTAATTACCGATCTGACTGCTTTCACCTCTTCTTTGTGTTCTTTCTTAAACTTTGTAGCAAAATCGTTTCATTCTCAGCTGGAAAAGTTGTGTTCTCCTCCCATTGTGCAAGAGAGCGACTCCTCTATTGTCAATTTTTAA

Protein sequence

MMNLLDFSFIVITDLTAFTSSLCSFLNFVAKSFHSQLEKLCSPPIVQESDSSIVNF
Homology
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BLAST of Carg27073 vs. NCBI nr
Match: KAG7030536.1 (hypothetical protein SDJN02_04573, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MMNLLDFSFIVITDLTAFTSSLCSFLNFVAKSFHSQLEKLCSPPIVQESDSSIVNF 57
          MMNLLDFSFIVITDLTAFTSSLCSFLNFVAKSFHSQLEKLCSPPIVQESDSSIVNF
Sbjct: 1  MMNLLDFSFIVITDLTAFTSSLCSFLNFVAKSFHSQLEKLCSPPIVQESDSSIVNF 56

The following BLAST results are available for this feature:
BLAST of Carg27073 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030536.11.0e-20100.00hypothetical protein SDJN02_04573, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg27073 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg27073 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg27073 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27073-RACarg27073-RAmRNA