Carg27066 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27066
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Geranylgeranyl pyrophosphate synthase
Location	Carg_Chr20: 11114083 .. 11115177 (-)
RNA-Seq Expression	Carg27066
Synteny	Carg27066

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTAGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCCTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTGTGACGGAGGAGGAGGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGGGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATTCACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTTGCTTTTGAGCATGTTGCGGTGTCGACCATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCAGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAACTCATGGGCATTGAAAAATCAAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

mRNA sequence

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTAGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCCTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTGTGACGGAGGAGGAGGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGGGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATTCACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTTGCTTTTGAGCATGTTGCGGTGTCGACCATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCAGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAACTCATGGGCATTGAAAAATCAAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

Coding sequence (CDS)

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTAGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCCTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTGTGACGGAGGAGGAGGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGGGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATTCACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTTGCTTTTGAGCATGTTGCGGTGTCGACCATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCAGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAACTCATGGGCATTGAAAAATCAAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

Protein sequence

MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETVTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN

Homology

[Close]

BLAST of Carg27066 vs. NCBI nr
Match: XP_022928068.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita moschata] >KAG6571392.1 Geranylgeranyl pyrophosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011157.1 Geranylgeranyl pyrophosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 693.3 bits (1788), Expect = 1.1e-195
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET
Sbjct: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ
Sbjct: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 364

[Close]

BLAST of Carg27066 vs. NCBI nr
Match: XP_023512846.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 690.3 bits (1780), Expect = 9.2e-195
Identity = 362/364 (99.45%), Postives = 363/364 (99.73%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSAVSLAASLQSCSIFTQACRSS FPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET
Sbjct: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +TEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ
Sbjct: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 364

[Close]

BLAST of Carg27066 vs. NCBI nr
Match: XP_022971694.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 684.9 bits (1766), Expect = 3.9e-193
Identity = 359/364 (98.63%), Postives = 362/364 (99.45%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVIS +RLS SSISSLSVYAVLAKEET
Sbjct: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISGRRLSRSSISSLSVYAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +TEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ
Sbjct: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDP+KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPEKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 364

[Close]

BLAST of Carg27066 vs. NCBI nr
Match: AHI88418.1 (geranylgeranyl diphosphate synthase [Citrullus lanatus])

HSP 1 Score: 656.4 bits (1692), Expect = 1.5e-184
Identity = 343/364 (94.23%), Postives = 352/364 (96.70%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIFTQACRSSSFPLKRG KSFVI + RL SSSISSLS+ AVLAKEET
Sbjct: 1   MSAMSLGTSFQSCSIFTQACRSSSFPLKRGFKSFVIPKPRLPSSSISSLSICAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +T EEEGKPTFNFKEYM+QKGNSVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LT-EEEGKPTFNFKEYMIQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGVAPPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVAPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKV YPKLMGIEKSREFAQKLNRDAQDQLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVAYPKLMGIEKSREFAQKLNRDAQDQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Carg27066 vs. NCBI nr
Match: XP_038901857.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 338/364 (92.86%), Postives = 352/364 (96.70%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QACRSSS+PLK+G KSFVI ++RL SSSISS S+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQACRSSSYPLKKGLKSFVIPKRRLPSSSISSFSICAVLTKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +T EEEGKPTFNFK+YMVQKGNSVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LT-EEEGKPTFNFKDYMVQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGVAPPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVAPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGS+E+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSDEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Carg27066 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.6e-144
Identity = 271/375 (72.27%), Postives = 318/375 (84.80%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSL---------SV 60
           MS+V+L + + +  +  QA RS S      SKSF +    L S +IS           SV
Sbjct: 1   MSSVNLGSWVHTSYVLNQATRSRS-----KSKSFSLPFNPLKSLAISFAYRKSERPISSV 60

Query: 61  YAVLAKEETVTEEEEGK--PTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLM 120
            A++ KEE   +EE+    P+F+FK YM+QKGNS+N+AL+AA+ L+EP KIHE+MRYSL+
Sbjct: 61  SAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLL 120

Query: 121 AGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRP LC+AACELVGGN+SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDI 240
           H VFGEDVAVLAGDALLAFAFEH+AVST+ V+  RIVRA+GELAK+IG+EGLVAGQVVDI
Sbjct: 181 HIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDI 240

Query: 241 NSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVV 300
           NSEG+++  L++LEFIH+HKTA LLE AVVLGAILGGG++EEVEKLR +AR IGLLFQVV
Sbjct: 241 NSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVV 300

Query: 301 DDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKA 360
           DDILDVTKSS ELGKTAGKDLVADKVTYPKL+GIEKSREFA+KLN++AQ+QL+GFDP+KA
Sbjct: 301 DDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKA 360

Query: 361 APLIALANYIAYRQN 365
           APLIALANYIA+RQN
Sbjct: 361 APLIALANYIAHRQN 370

[Close]

BLAST of Carg27066 vs. ExPASy Swiss-Prot
Match: Q42698 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.8e-137
Identity = 248/329 (75.38%), Postives = 284/329 (86.32%), Query Frame = 0


Query: 45  SISSLSVYAVLAKEETVTEEE---------EGKPTFNFKEYMVQKGNSVNRALDAAVFLR 104
           S S LS+ A++ KE+T  E E             +F+FK YM+ K NSVN+AL+ AV +R
Sbjct: 29  SCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALEDAVLVR 88

Query: 105 EPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLP 164
           EPLKIHE+MRYSL+AGGKRVRP+LCIAACEL GG ES+AMP+ACAVEMIHTMSL+HDDLP
Sbjct: 89  EPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLP 148

Query: 165 CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKS 224
           CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH+A +T GV+  RIVR +GELAK 
Sbjct: 149 CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKC 208

Query: 225 IGSEGLVAGQVVDINSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKL 284
           IGSEGLVAGQVVD+ SEG AD GL+ LEFIH+HKTAALLE +VVLGAI+GG ++E++ KL
Sbjct: 209 IGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKL 268

Query: 285 RNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNR 344
           R FAR IGLLFQVVDDILDVTKSS ELGKTAGKDLVADKVTYPKL+GI+KSREFA+KLNR
Sbjct: 269 RKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNR 328

Query: 345 DAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           +AQ+QL+ FDP+KAAPLIALANYIAYR N
Sbjct: 329 EAQEQLAEFDPEKAAPLIALANYIAYRDN 357

[Close]

BLAST of Carg27066 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 478.8 bits (1231), Expect = 5.5e-134
Identity = 256/355 (72.11%), Postives = 299/355 (84.23%), Query Frame = 0


Query: 14  SIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETVTEEEEGKPTFNF 73
           SI T++ RS S P+         S++ +SSS  SS+   +V+ KE+ + + E    +F+F
Sbjct: 22  SILTKS-RSRSCPITLTKPISFRSKRTVSSS--SSIVSSSVVTKEDNLRQSEPS--SFDF 81

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y++ K   VN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES 
Sbjct: 82  MSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEST 141

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 201

Query: 194 AVSTIG--VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHK 253
           A +T    V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    D GL+ LEFIHLHK
Sbjct: 202 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHK 261

Query: 254 TAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKD 313
           TAALLEA+ VLGAI+GGGS++E+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKD
Sbjct: 262 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 321

Query: 314 LVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           L+ADK+TYPK+MG+EKSREFA+KLNR+A+DQL GFD  K APL+ALANYIAYRQN
Sbjct: 322 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Carg27066 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 9.7e-131
Identity = 251/354 (70.90%), Postives = 296/354 (83.62%), Query Frame = 0


Query: 14  SIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETVTEEEEGKPTFNF 73
           +I TQ+ RS S P     K   ++ +R  SSS SS    +++ KE+     +    +F+F
Sbjct: 20  TILTQS-RSRSPPSLITLKPISLTPKRTVSSSSSS----SLITKED--NNLKSSSSSFDF 79

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y+++K +SVN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES+
Sbjct: 80  MSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESL 139

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPA CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GEDVAVLAGDALL+FAFEH+
Sbjct: 140 AMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHL 199

Query: 194 AVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHKT 253
           A +T   V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    + GL+ L+FIHLHKT
Sbjct: 200 ASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKT 259

Query: 254 AALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDL 313
           AALLEA+ VLG I+GGGS+EE+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKDL
Sbjct: 260 AALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDL 319

Query: 314 VADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           +ADK+TYPKLMG+EKSREFA+KLN +A+DQL GFD  K APL+ALANYIA RQN
Sbjct: 320 IADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366

[Close]

BLAST of Carg27066 vs. ExPASy Swiss-Prot
Match: P80042 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.5e-128
Identity = 247/371 (66.58%), Postives = 290/371 (78.17%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSF------PLKRGSKSFVISRQRLSSSSISSLSVYAV 60
           M+ V L A  Q+C +F Q     SF      PLK    +  ++++R      S L+V A+
Sbjct: 4   MNLVDLWAQ-QACLVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKR----PFSPLTVSAI 63

Query: 61  -LAKEETVTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGK 120
              KE+   E  + +  FNFK Y+ +K  SVN+ALD A+ ++EP  IHEAMRYSL+AGGK
Sbjct: 64  ATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGK 123

Query: 121 RVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 180
           RVRP+LC+AACELVGGN+  AM AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK++
Sbjct: 124 RVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIY 183

Query: 181 GEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG 240
           GEDVAVLAGD+LLAFAFEH+  ST GV P RIV A+ ELAKSIG+EGLVAGQV DI   G
Sbjct: 184 GEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTG 243

Query: 241 AADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDIL 300
            A   L+ LEFIH+HKTAALLE++VVLGAILGGG+N EVEKLR FAR IGLLFQVVDDIL
Sbjct: 244 NASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDIL 303

Query: 301 DVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLI 360
           DVTKSS ELGKTAGKDLV DK TYPKL+G+EK++EFA +LNR+A+ QL GFD +KAAPLI
Sbjct: 304 DVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLI 363

Query: 361 ALANYIAYRQN 365
           ALA+YIAYR N
Sbjct: 364 ALADYIAYRDN 369

[Close]

BLAST of Carg27066 vs. ExPASy TrEMBL
Match: A0A6J1EMT8 (geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434962 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.2e-196
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET
Sbjct: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ
Sbjct: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 364

[Close]

BLAST of Carg27066 vs. ExPASy TrEMBL
Match: A0A6J1I9A8 (geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470365 PE=3 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 359/364 (98.63%), Postives = 362/364 (99.45%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVIS +RLS SSISSLSVYAVLAKEET
Sbjct: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISGRRLSRSSISSLSVYAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +TEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ
Sbjct: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDP+KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPEKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 364

[Close]

BLAST of Carg27066 vs. ExPASy TrEMBL
Match: W6CYI2 (Geranylgeranyl diphosphate synthase OS=Citrullus lanatus OX=3654 GN=GGPS PE=2 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.1e-185
Identity = 343/364 (94.23%), Postives = 352/364 (96.70%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIFTQACRSSSFPLKRG KSFVI + RL SSSISSLS+ AVLAKEET
Sbjct: 1   MSAMSLGTSFQSCSIFTQACRSSSFPLKRGFKSFVIPKPRLPSSSISSLSICAVLAKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +T EEEGKPTFNFKEYM+QKGNSVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LT-EEEGKPTFNFKEYMIQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGVAPPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVAPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKV YPKLMGIEKSREFAQKLNRDAQDQLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVAYPKLMGIEKSREFAQKLNRDAQDQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Carg27066 vs. ExPASy TrEMBL
Match: T1RR58 (Geranylgeranyl pyrophosphate synthase OS=Cucumis melo OX=3656 GN=GGPS PE=3 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.4e-180
Identity = 334/364 (91.76%), Postives = 350/364 (96.15%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +T EEEGKPTFNFKEYMVQKG SVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LT-EEEGKPTFNFKEYMVQKGASVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Carg27066 vs. ExPASy TrEMBL
Match: A0A5D3CR76 (Geranylgeranyl pyrophosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002220 PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.2e-179
Identity = 333/364 (91.48%), Postives = 349/364 (95.88%), Query Frame = 0


Query: 1   MSAVSLAASLQSCSIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  VTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           +T EEEGKPTFNFKEYMVQKG SVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LT-EEEGKPTFNFKEYMVQKGASVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QL GFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLFGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Carg27066 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 478.8 bits (1231), Expect = 3.9e-135
Identity = 256/355 (72.11%), Postives = 299/355 (84.23%), Query Frame = 0


Query: 14  SIFTQACRSSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETVTEEEEGKPTFNF 73
           SI T++ RS S P+         S++ +SSS  SS+   +V+ KE+ + + E    +F+F
Sbjct: 22  SILTKS-RSRSCPITLTKPISFRSKRTVSSS--SSIVSSSVVTKEDNLRQSEPS--SFDF 81

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y++ K   VN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES 
Sbjct: 82  MSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEST 141

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 201

Query: 194 AVSTIG--VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHK 253
           A +T    V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    D GL+ LEFIHLHK
Sbjct: 202 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHK 261

Query: 254 TAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKD 313
           TAALLEA+ VLGAI+GGGS++E+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKD
Sbjct: 262 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 321

Query: 314 LVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           L+ADK+TYPK+MG+EKSREFA+KLNR+A+DQL GFD  K APL+ALANYIAYRQN
Sbjct: 322 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Carg27066 vs. TAIR 10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 456.8 bits (1174), Expect = 1.6e-128
Identity = 236/317 (74.45%), Postives = 270/317 (85.17%), Query Frame = 0


Query: 50  SVYAVLAKEETVTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLM 109
           +V +V A++E +         F+F  YM+ K N+VN ALD+AV LREP+KIHEA+RYSL+
Sbjct: 37  TVLSVTARDEGIIHNH-----FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLL 96

Query: 110 AGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169
           A GKRVRPVLCIAACELVGG ES+A+PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 97  ARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 156

Query: 170 HKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDI 229
           HKVFGEDVAVLAGDAL++FAFEH+A ST  V+P R+VRAIGELAK+IGS+GLVAGQVVD+
Sbjct: 157 HKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDL 216

Query: 230 NSEG--AADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQ 289
            S G    D GL+ LEFIH+HKTA LLEAA VLGAI+GGGS+EEVEKLR FAR IGLLFQ
Sbjct: 217 TSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQ 276

Query: 290 VVDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQ 349
           VVDDILDVTKSS ELGKTAGKDL+ADK+TYPKLMG+EKS++FA KL  DA +QL GFD  
Sbjct: 277 VVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSS 336

Query: 350 KAAPLIALANYIAYRQN 365
           +  PL+ALANYIA RQN
Sbjct: 337 RVKPLLALANYIAKRQN 347

[Close]

BLAST of Carg27066 vs. TAIR 10
Match: AT3G14550.1 (geranylgeranyl pyrophosphate synthase 3 )

HSP 1 Score: 417.9 bits (1073), Expect = 8.2e-117
Identity = 224/348 (64.37%), Postives = 272/348 (78.16%), Query Frame = 0


Query: 34  FVISRQRL--SSSSISSLSVYAVLAKEETVTEE-------EEGK-----PTFNFKEYMVQ 93
           F+ SR R   S SS+ SL     L+    +T +        EGK       F+FK YM++
Sbjct: 13  FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIR 72

Query: 94  KGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMPAAC 153
           K  SVN ALD +V LREPL + EA+RYSL+AGGKRVRP+LCIA CELVGG+E+ AM AAC
Sbjct: 73  KAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAAC 132

Query: 154 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVAVSTIG 213
           AVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G
Sbjct: 133 AVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSG 192

Query: 214 -VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSE--GAADAGLQQLEFIHLHKTAALLEA 273
            VAP R++RA+ ELA++IG+ GLVAGQ++D+ SE       GL+ LEFIHLHKTAALLEA
Sbjct: 193 LVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEA 252

Query: 274 AVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVT 333
           A VLG I+GGG+ EE+EKLR +AR IGLLFQVVDDILDVTKS+ ELGKTAGKD++A K+T
Sbjct: 253 AAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLT 312

Query: 334 YPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           YP+L+G+E+S+E A+KL R+A++QL GFDP KAAPL+ALA+YIA R N
Sbjct: 313 YPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360

[Close]

BLAST of Carg27066 vs. TAIR 10
Match: AT3G14530.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-116
Identity = 225/358 (62.85%), Postives = 274/358 (76.54%), Query Frame = 0


Query: 22  SSSFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETVTEEEEG------------KP 81
           SS F   RG       R+  S SS+ SL    VL+    +T ++ G              
Sbjct: 10  SSLFSQSRG-------RRDNSISSVKSLRKRTVLSLSSALTSQDAGHMIQPEGKSNDNNS 69

Query: 82  TFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGG 141
            F+FK YM++K  SVN ALD +V L +PL I EA+RYSL+AGGKRVRP+LCIAACELVGG
Sbjct: 70  AFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGG 129

Query: 142 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 201
           +E+ AM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA A
Sbjct: 130 DEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALA 189

Query: 202 FEHVAVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSE--GAADAGLQQLEFIH 261
           FEH+ V + G VAP +++RA+ ELA++IG+ GLVAGQ++D+ SE       GL+ LEFIH
Sbjct: 190 FEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 249

Query: 262 LHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTA 321
           LHKTAALLEAA VLG I+GGG+ +E+EKLR +AR IGLLFQVVDDILDVTKS+ ELGKTA
Sbjct: 250 LHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTA 309

Query: 322 GKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           GKD++A K+TYP+L+G+E SRE A+KL R+A++QL GFDP KAAPL+ALA+YIA R N
Sbjct: 310 GKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360

[Close]

BLAST of Carg27066 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 2.2e-114
Identity = 228/368 (61.96%), Postives = 282/368 (76.63%), Query Frame = 0


Query: 6   LAASLQSCSIFTQACRSSSFPLKRGSK-SFVISRQRLSSSSISSLSVYAVLAKEETVTEE 65
           +A +L S S+F Q          RG + + + S   L   ++ SLS    L+ +      
Sbjct: 1   MATTLSSSSLFIQF---------RGRRYNSLSSFNNLQKRTVLSLS--CALSSQGGDMIP 60

Query: 66  EEGK-----PTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVL 125
            EGK       F+FK YM++K  SV+ AL+ +V L+EPL I EA+RYSL+AGGKRVRP+L
Sbjct: 61  PEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLL 120

Query: 126 CIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAV 185
           CIAACELVGG+E+ AM AACAVEMIHT SLIHDDLPCMD+ DLRRGKPTNHK FGED+AV
Sbjct: 121 CIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAV 180

Query: 186 LAGDALLAFAFEHVAVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AAD 245
           LAGDALLA AFEH+   + G VAP R++RA+ ELAK+IG++GLVAGQV D+ S+G    D
Sbjct: 181 LAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDD 240

Query: 246 AGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVT 305
            GL++LEFIHLHKTAALLEAA VLGAI+GGG+ EE+EKLR +AR IGLLFQVVDDILDVT
Sbjct: 241 VGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVT 300

Query: 306 KSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALA 365
           +S+ ELGKTAGKD++A K+TYP+L+G+E+SRE A+KL R+A +QL GFD  KAAPL+ALA
Sbjct: 301 ESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALA 357

The following BLAST results are available for this feature:

BLAST of Carg27066 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928068.1	1.1e-195	100.00	geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita moschata] >...	[more]
XP_023512846.1	9.2e-195	99.45	geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita pepo subsp....	[more]
XP_022971694.1	3.9e-193	98.63	geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita maxima]	[more]
AHI88418.1	1.5e-184	94.23	geranylgeranyl diphosphate synthase [Citrullus lanatus]	[more]
XP_038901857.1	1.8e-182	92.86	geranylgeranyl pyrophosphate synthase, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Carg27066 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID7	2.6e-144	72.27	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q42698	1.8e-137	75.38	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4...	[more]
P34802	5.5e-134	72.11	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q43133	9.7e-131	70.90	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
P80042	4.5e-128	66.58	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 ...	[more]

BLAST of Carg27066 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMT8	5.2e-196	100.00	geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita moschata ...	[more]
A0A6J1I9A8	1.9e-193	98.63	geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita maxima OX...	[more]
W6CYI2	7.1e-185	94.23	Geranylgeranyl diphosphate synthase OS=Citrullus lanatus OX=3654 GN=GGPS PE=2 SV...	[more]
T1RR58	2.4e-180	91.76	Geranylgeranyl pyrophosphate synthase OS=Cucumis melo OX=3656 GN=GGPS PE=3 SV=1	[more]
A0A5D3CR76	1.2e-179	91.48	Geranylgeranyl pyrophosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Carg27066 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36810.1	3.9e-135	72.11	geranylgeranyl pyrophosphate synthase 1	[more]
AT2G18620.1	1.6e-128	74.45	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	8.2e-117	64.37	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G14530.1	1.1e-116	62.85	Terpenoid synthases superfamily protein	[more]
AT3G29430.1	2.2e-114	61.96	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 66..364 e-value: 3.4E-106 score: 356.7
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 74..345
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 100..333 e-value: 3.2E-57 score: 193.5
IPR000092	Polyprenyl synthetase	CDD	cd00685	Trans_IPPS_HT	coord: 100..362 e-value: 2.20202E-95 score: 282.903
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 76..362 e-value: 0.0 score: 292.1
None	No IPR available	SFLD	SFLDG01017	Polyprenyl_Transferase_Like	coord: 76..362 e-value: 0.0 score: 292.1
None	No IPR available	PANTHER	PTHR43281:SF28	GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC	coord: 1..364
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 1..364
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 149..165
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00444	POLYPRENYL_SYNTHASE_2	coord: 282..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27066-RA	Carg27066-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0016740	transferase activity