Carg27038 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATCTTTCAACTTTATCATCATCTTTCCCATGGAAAATATAATAATGCAGATGTTCTTTCTAGACAACCCCTTTACTTTTTCTTTTTCCCATGGCGTTGTTCTTATCTACTAACACCCTTTCTTCTTACTATAAATAATTCATTTCAATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGGCCTCACCACGCAGCAGAAGAAGATGCCCTTCGCGAGGAAAATAACAAGGTTTGGTTGTTGGATAGCCTTTGTGATTTCTTTTCTTTAAATTATTGAATGAAACTCATGATTTTTATTAGTGTTCTTATAGTTTTTTAATGTTTGATCTTTGAAAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTATTGTCAACTCCGACGAGTAAGTGTCTATTTACTTGAGCTTTTTGATAAATGGTAAATTAACTTGTAATAAGAGTAATGGATAATTTAGTGTGTAAACCTTATATATTGTGTTAATTTTAAAGCTCCGATTCGAATAGGATGCTTTTTACTTAATATTACGATATAAACCTATGATCATTCCCTAAATTAGCCAATGGGGAACTCTCTCTCAACAATCCTCCTCTCGAACAAAGTATACTATAGAGCCTTCCATGAGGTCTATAGAGCCCTCGAACAAAGTACACCCTTTGTTTGACAATTGAGTCACTTTTGACTACACTTTCTGGACTCACAATTTTTTTTTGTTCGACATCTGAGGATTCTATTAACATGGCTAAGTTAAAGACATGACTCTAATACAATGTTAGACATTACGACTCTTCGCAATAGTATAATATTGTCCACTTTGAACCTAAGCTCTCGTGGCTTTGATTTGGGCTTCCCCAAAAAGCCTCTTACCAATGGAGATGTATTACTTGCTTATAAACTCATAATCATTATCTAAATTAGCGAATGTGTGACTCTCTCCCAACAATCCTCAACATAGATGATGTTTAATGAAATTAGCTAAGGCGTGTGCAACCTAATTTGATATCAAATTAAGTTATTGGGTTTTGTTGGTTTTGATTCTCGATCAAAACACACCGAAATAAATAACCGAAACAGAAAGAGATAATAAATAACACGATTGCTTGAGAATAAAACACACTATTCAAACAATTCTTCTCCTAGAAATACTCTACAATTAATAACATTTTCTAAAAATGCTCCACGACTAATAACTTCTAATGCTCCTTGTTCGACTTTGAACAAGTAAAGCTCATTGACTCACCGGGATCGAGTGATCTAACAAAGTTGGGTCATTTTGTGCAGGCAGGTGGCCGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAAAGTGGGTTTCAATGTTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGACCACCCAGAGAAAAAGTTTATCATTCCTAGGACGCCTTTAATAATCTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGAAGGTTGACTAAACTTTGAGCCATAATCCTATGAGGGATATGAGATTTCCTTTGTTTTTTAAGCTTTCAAAATGTTATGATGTTTGTAAAAGTAAAAGGATGTCTTTGATGTTGTTGATTCATTGATATGTTAAAGTCTCGTTTTGTTGCTTAATTGAATGCTATTTATTATTATATTGCTTAATCTATAGCCAAAAACTCCAAACGGGCTTTAGGAAGGACAAGGATTGTTTAGTTCAAGATTTTGTTTCAGATGTTCACAAATAAGATGACTTATGATGTCTAGAAATTAGGGGTGTTTATAGATTGGGTTAGGTCGGATAGGAAAGCTTTTTAGATTCAGCTCAATTATTCAGCTCAATTATTCGGGCCTGTAAACTTTCAATTCAAACAATTCTTATTAAATAAGGAATACAATCCAACCCAACCATAAACTTTTTGAGTCTTTTTGAGTT CAATCTTTCAACTTTATCATCATCTTTCCCATGGAAAATATAATAATGCAGATGTTCTTTCTAGACAACCCCTTTACTTTTTCTTTTTCCCATGGCGTTGTTCTTATCTACTAACACCCTTTCTTCTTACTATAAATAATTCATTTCAATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGGCCTCACCACGCAGCAGAAGAAGATGCCCTTCGCGAGGAAAATAACAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTATTGTCAACTCCGACGAGCAGGTGGCCGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAAAGTGGGTTTCAATGTTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGACCACCCAGAGAAAAAGTTTATCATTCCTAGGACGCCTTTAATAATCTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGAAGGTTGACTAAACTTTGAGCCATAATCCTATGAGGGATATGAGATTTCCTTTGTTTTTTAAGCTTTCAAAATGTTATGATGTTTGTAAAAGTAAAAGGATGTCTTTGATGTTGTTGATTCATTGATATGTTAAAGTCTCGTTTTGTTGCTTAATTGAATGCTATTTATTATTATATTGCTTAATCTATAGCCAAAAACTCCAAACGGGCTTTAGGAAGGACAAGGATTGTTTAGTTCAAGATTTTGTTTCAGATGTTCACAAATAAGATGACTTATGATGTCTAGAAATTAGGGGTGTTTATAGATTGGGTTAGGTCGGATAGGAAAGCTTTTTAGATTCAGCTCAATTATTCAGCTCAATTATTCGGGCCTGTAAACTTTCAATTCAAACAATTCTTATTAAATAAGGAATACAATCCAACCCAACCATAAACTTTTTGAGTCTTTTTGAGTT ATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGGCCTCACCACGCAGCAGAAGAAGATGCCCTTCGCGAGGAAAATAACAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTATTGTCAACTCCGACGAGCAGGTGGCCGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAAAGTGGGTTTCAATGTTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGACCACCCAGAGAAAAAGTTTATCATTCCTAGGACGCCTTTAATAATCTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGAAGGTTGACTAA MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDALREENNKLTIYPRGFNITWGNDERYWRIVNSDEQVAELKQVSWLEVTCSTDKVEFGKRYKVGFNVSLRPDAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEKKFIIPRTPLIISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD Homology
BLAST of Carg27038 vs. NCBI nr
Match: KAG7012601.1 (Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 393.7 bits (1010), Expect = 9.1e-106 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of Carg27038 vs. NCBI nr
Match: KAG6573454.1 (Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 357.5 bits (916), Expect = 7.2e-95 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg27038 vs. NCBI nr
Match: XP_023541318.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.3 bits (856), Expect = 6.5e-88 Identity = 157/173 (90.75%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Carg27038 vs. NCBI nr
Match: XP_022994910.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 297.7 bits (761), Expect = 6.8e-77 Identity = 140/174 (80.46%), Postives = 152/174 (87.36%), Query Frame = 0
BLAST of Carg27038 vs. NCBI nr
Match: XP_022142416.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 241.1 bits (614), Expect = 7.5e-60 Identity = 113/171 (66.08%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30 Identity = 71/183 (38.80%), Postives = 97/183 (53.01%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy TrEMBL
Match: A0A6J1K2M8 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490494 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 3.3e-77 Identity = 140/174 (80.46%), Postives = 152/174 (87.36%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy TrEMBL
Match: A0A6J1CM42 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012557 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.6e-60 Identity = 113/171 (66.08%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy TrEMBL
Match: A0A6J1GT21 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457217 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.8e-59 Identity = 127/223 (56.95%), Postives = 146/223 (65.47%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 5.4e-56 Identity = 107/173 (61.85%), Postives = 130/173 (75.14%), Query Frame = 0
BLAST of Carg27038 vs. ExPASy TrEMBL
Match: A0A5A7TIU6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001140 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 7.4e-53 Identity = 110/174 (63.22%), Postives = 130/174 (74.71%), Query Frame = 0
BLAST of Carg27038 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 134.4 bits (337), Expect = 9.2e-32 Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 0
BLAST of Carg27038 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 71/183 (38.80%), Postives = 97/183 (53.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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