Carg27007 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg27007
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSingle-stranded DNA-binding protein
LocationCarg_Chr10: 9699807 .. 9704512 (-)
RNA-Seq ExpressionCarg27007
SyntenyCarg27007
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTACCCTCATCGAATCGACACACTTCCAGTTCTGCTCTCGCTCGATCAACATGAATGCAGTCGCAATGAGATTCCTCAAGCATTTCAGGATTTCTTCTTCATTTGGTACTCTCTCTCTATCTTTCTCTTGTTTGATTGATTAAGGCGTATGTTCTTTACGTTCTACGAGCTGAGGGAATTTCCCAAGACGTTTTCTATGGTTTAGTGTCGAAAAGGCCGATTGATTTTTGAAAGCAGCTTTTTTCCGAATTTTTGCAGTTTGATCTTCGGAGTGGATTTTTATCAAATATACGTGGTGAGCGAACTTGTTTTTTTTATTTTTATTTTTATTTTATTTGAGAGGCTGGATGAAGAACTTGATTTTTATCAAGACGTTTTCTATGGTTTAGTGTCGAAAAGGTCGATTGATTTTTGAAAGCAGCTTTCCGAATTTTTGCAATTTGATCTTCGGAGTGGATTTTTATCAGATATACGTGGTGAGAGAACTTGTTTTTGTTTTAATTTGAGAGGCTCGATGAAGAACTTGACTAATCTTATGTATTGGGTGTTTATATGTAATGTTTTTGCTGGAGTGGTGGCTTGATTACTTATTGAACGTTTGATTGTAGTGGCAAGTAGGCAAACGAGCTCAAAGTTGTGGTTATCGACTAGTGCTTCTGGAAGTGGCATTGATGTTGAGAAGAACAATGGAGAAGAAGAAGAATATGATGATCTTTTTAATGATAAAATTGAATTACAGCCCCAGGGTGTGGATCCCAGGCGAGGTTGGGGATTTCGTGGCGTACATAAGGTATCTGATCTTTGTCTACTGATGTGTTCCATTTCTAAAAGTTGGGATTTGAAATCCGGATGCTGGGAATTTCACCCAAATAGTGGTGTTTAGTATCTCCAATCTGTTATTGGGATGATTCTTCATGTTTTTGGTGACTGTTTTACTTTTATCAAATTTATAAACTATCCAAAATAAAAGAACAGCTTCTATATTTTTGGTTTTTAGAAGATGTGTCTAGTGCCTCGCCTTCTTTTGTTGATGAGTGTTATAGGAAATCTGATTCGAAAGAGAAGTCATTTGTGTACTTCCGTATTTTAGAAAGCATAAGAATGGGGTATAGCGAGTAAGTGAGAGCCGTTGTGGGCAACGAAAGAACGAGAACTTATGTGGCTAGAGCTTGAACTTTAAAGTATGATGTAAGTGGTTTGGAACATTAAATATATGTGTGTTATGAAACTCTTGGGATTTGATCTAACAAACATCTTGAATAACAACAAGATCTTTAGATCTAAATTATCAAGAACCCCAAAAATGATAAGGAATCAACCTAAGGAAAAGATTTGGAACGGATTACCTTGATGATCAAGATCAAGAATAAAGAGAACTTGTTTCTGGACACATGATTTGAATCACTCCACAAGATAGCTTGATCAAGACTACTTGACTGACTCTAGCATGCAAATCTAAAAACAAGAAATGCAAAGGAACAAGCTCCATGTCTTAAGAAGCATAGTATGCAACTTTCATTATAATATCTAAGAATCTTGATACTAAAGCAACCACATGAATAACATGAATGCCTATTTATAGCCTTGAAAATAAACCTTATAATAACCTATGGTTAATTGAAAGGTTGTAACTTTTATGGCCATCAATACCATAATGGTCACTATCTAAATGTAACTTATAATCTTAAAGATAATTTTCTAAAACTTAAAAAATATAATAAAGTACTTAAATCTTTGTGGCATAATTAAGACATCTTATTTTGTATCAGTACGTGTGATGTATTGTAAGGTTCCGGGTGAACAGGTAGGATGAGTAATTTCTTAGATAGTTCAGAACTTCAACGAATCACTTGTAAGTGAGACTTGAGAGTTACGATGGGCAACAATTAGAGTGAGTTTGGGAGAAGCCCAGAGCTCTGTAACTTTGGTGGTTCTGGAATCTGTCGTTGATTGTGAAAGATTTATTCTCACATGATAATTGGATTCATATCAGCTATTTATAGATAGATTATACAACATAACTAACATTACCAGAAAGCCTAACTAATCAGCTAAATAGTTAACTAATTTTCTTCTCCTTTAGTGTGTCTGTTCTCATCTTTTGTGGAATATACCTTTCTCTGTTTGTTATCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCATCTGAATATATCAGACAATAGTTACCTCTCTTTAGCATTTGATTAAATATCTTCCTTGGAGGGTTACATCACAATCTTAGGATAAGTCCCACCCCAACTAAGCAGAAGAAATTATATTTGATTCAGGTGATTAGATAATGTGAAAACGAGGTAAAAACCAGGAAAAGCACGTCTCTTTAAATTTGTTATCTCCTGCAGAGAAAGAAGAGATCAGTGATCCTCAATATATTGTTTTTTCTGTTTAAAAATGTGATCAAATGTTTGCAGGCAATAATTTGTGGAAGGATTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGCACAATAACAATCTTTACAGTTGGAACAGGAGGGATGTTTGACCAACGAATTGTTGAAGCAAAAGATCTGCCAAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACCACTTGGTGCTTATGCAGTTCAACAACTTGTTAAAAAGTATGATCTGAACTTCTCATAAAGCTAGTTTGTTTGTACAACTTCACTGATTCTTGGTTAACTATCAGCGCATCGGTTTATGTTGAGGGCGACATTGAAACCAGAGTCTACAATGACAGCATCAATGGTGAAGTAAAAAATGTCCCAGAAATATGTGTTCGACGGGATGGTATTACAATACTTACTATTATCTTTTGATTTCCTTTTCAATGTTTCTGTAATAGCCCAAACTCATCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCCTCCTGTCAAGGTTTTTAAAATGCGTCTTCTAGGGAGATTTTCCTACACTTTTATAAAGAATGCTTCGTTCTCCTCCCCAATCGATGTGGGATCTCACAATCCATTCCCCTTTGGAGCCCAGCGTCCTCGCTGGCACTCATTCCCTTCTCCAATTGATGTGGGGCCCCCCCAATCCATCCTCTTCGGGGCTTAGCATCCTTGTTGGCACACTGCTTCGTGTTGACCTCCCTTTGGGGCTCAGCCTCCTTGTTGGCACATTGCCCGGTGTCTGGCTTTGATCTTCTCTGTATTGTTCCAATTTTGTCGGATGTCCTTTTTGTTGTAAGATCTCACATCGGTTGGGGAAGAGAATGAAACATTTTTTAAAAGAGTGGAAACATCTGCTATTCCTAGCAAACGCGTTCTAAAAATCTTGAGGGGAAACCCAGAAGGAAAAGTCAAAAGAAGACACAATATTTACTAACGGTGGGCTTGGGCTATTACAATATCTTAGATTAATAAGGGGCTATTACAGTATCTTAGATTAATAAGAAGTGTCATCATCTTATAACTTCTGTACGTTTTGCATCTACTTGATTTTTTCGTAAAGGTCATTTTAAGCATCTAAAAGGGCGTGCTTGAATATTCATAATCATAAAGATTAAATTATTATATTAGTTCATATTGTTTGTACTTGATCTTCATTTAGCTCCCTATTATATAACATTTTAAATTCGATCCCTTTTATTTTATTTGGTTTTTCAGAACTTCTCTAGTATCACAAGATGTTGACAATCATTTTACATGACATATTTTCTTTAGATTTGATAGAAAGGTGATAAGTTAGTGTCTTAAGAATGTGTATCAAGTCAGAAAAGTGGCAGGATTTGGTAAACCATAGGCATTCCAAGACATAACCAGTCAAAGGGACCAAGTTGAAATGTTTAAAGCCATAGGAACAAATTGAAATTAAAAGTACAAATTATGAAGACAAAAAGGGTTAATCTATCCTAATCTTTATATGGTATGAACAGAGAATTATTCACGACCATGAACAGCTAATACTTTTGTTAAATGTTGGTTCAAGTTTGATCTGTAAATGACCTTATTGGGGACCCTTTTAACTGCCATGCTTCCTTTTTTGCAGGGAAGATTCGGCTTTTAAAGGCCGGAGAAAGTGCCAGCAATATTTGTCTGGACGATTTAAGTGAGCTTTCCAGATAACATTCTGTATATGTGATTACTAAACATGGAACAATGCATTGCATGACATCTGATGTGTGTTTTTTTGTTTGTTTTGTAATTGACAGAAGAAGGGTTGTTTGACAACGAGACATAACATGTTGCCAAAAAGAGACGGTATTGCTTGCCATTCAAAGATTAGCTATAATAGTTGAGTATTGAAACTACCAATGCCTCATAATCTCTTCTTGCAATTGTTTAGTTTATTAGCGTTGTAGCATGTTGTTCTTCAAGGCTCTTAAAGCCAGTTTTGTGTTAGATTGGTCAGGGATATTATTATAGGCTCACAAGAGTTGTCACTGCTGATGTGATGCCTTTATTCTTGTTTCAATGCATTTCTCCTAACAAGTGATGGCATCATAGTTTTGAAATCCACAGATTAGACAAAGTTCAATAGAAGACTGTTAATTGTTAATGTCTCGTTTGATAATTATAGAACGATCATAAGCGGGGAAGTTGAAGCAAGAGGTATTCAAAGAACTTTTGTATAATCAAACTTCCATTTCGTTGGTCTCTAAGATAAAGTCTCCTTAATCGTTCATTTCTCATTTG

mRNA sequence

TTTTACCCTCATCGAATCGACACACTTCCAGTTCTGCTCTCGCTCGATCAACATGAATGCAGTCGCAATGAGATTCCTCAAGCATTTCAGGATTTCTTCTTCATTTGTGGCAAGTAGGCAAACGAGCTCAAAGTTGTGGTTATCGACTAGTGCTTCTGGAAGTGGCATTGATGTTGAGAAGAACAATGGAGAAGAAGAAGAATATGATGATCTTTTTAATGATAAAATTGAATTACAGCCCCAGGGTGTGGATCCCAGGCGAGGTTGGGGATTTCGTGGCGTACATAAGGCAATAATTTGTGGAAGGATTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGCACAATAACAATCTTTACAGTTGGAACAGGAGGGATGTTTGACCAACGAATTGTTGAAGCAAAAGATCTGCCAAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACCACTTGGTGCTTATGCAGTTCAACAACTTGTTAAAAACGCATCGGTTTATGTTGAGGGCGACATTGAAACCAGAGTCTACAATGACAGCATCAATGGTGAAGTAAAAAATGTCCCAGAAATATGTGTTCGACGGGATGGGAAGATTCGGCTTTTAAAGGCCGGAGAAAGTGCCAGCAATATTTGTCTGGACGATTTAAAAGAAGGGTTGTTTGACAACGAGACATAACATGTTGCCAAAAAGAGACGGTATTGCTTGCCATTCAAAGATTAGCTATAATAGTTGAGTATTGAAACTACCAATGCCTCATAATCTCTTCTTGCAATTGTTTAGTTTATTAGCGTTGTAGCATGTTGTTCTTCAAGGCTCTTAAAGCCAGTTTTGTGTTAGATTGGTCAGGGATATTATTATAGGCTCACAAGAGTTGTCACTGCTGATGTGATGCCTTTATTCTTGTTTCAATGCATTTCTCCTAACAAGTGATGGCATCATAGTTTTGAAATCCACAGATTAGACAAAGTTCAATAGAAGACTGTTAATTGTTAATGTCTCGTTTGATAATTATAGAACGATCATAAGCGGGGAAGTTGAAGCAAGAGGTATTCAAAGAACTTTTGTATAATCAAACTTCCATTTCGTTGGTCTCTAAGATAAAGTCTCCTTAATCGTTCATTTCTCATTTG

Coding sequence (CDS)

ATGAATGCAGTCGCAATGAGATTCCTCAAGCATTTCAGGATTTCTTCTTCATTTGTGGCAAGTAGGCAAACGAGCTCAAAGTTGTGGTTATCGACTAGTGCTTCTGGAAGTGGCATTGATGTTGAGAAGAACAATGGAGAAGAAGAAGAATATGATGATCTTTTTAATGATAAAATTGAATTACAGCCCCAGGGTGTGGATCCCAGGCGAGGTTGGGGATTTCGTGGCGTACATAAGGCAATAATTTGTGGAAGGATTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGCACAATAACAATCTTTACAGTTGGAACAGGAGGGATGTTTGACCAACGAATTGTTGAAGCAAAAGATCTGCCAAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACCACTTGGTGCTTATGCAGTTCAACAACTTGTTAAAAACGCATCGGTTTATGTTGAGGGCGACATTGAAACCAGAGTCTACAATGACAGCATCAATGGTGAAGTAAAAAATGTCCCAGAAATATGTGTTCGACGGGATGGGAAGATTCGGCTTTTAAAGGCCGGAGAAAGTGCCAGCAATATTTGTCTGGACGATTTAAAAGAAGGGTTGTTTGACAACGAGACATAA

Protein sequence

MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVRRDGKIRLLKAGESASNICLDDLKEGLFDNET
Homology
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BLAST of Carg27007 vs. NCBI nr
Match: KAG7024011.1 (Single-stranded DNA-binding protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE
Sbjct: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNICLDDLKEGLFDNET
Sbjct: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 211

[Close]
BLAST of Carg27007 vs. NCBI nr
Match: KAG6590479.1 (Single-stranded DNA-binding protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.5 bits (1090), Expect = 5.4e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDD FNDKIE
Sbjct: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNICLDDLKEGLFDNET
Sbjct: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 211

[Close]
BLAST of Carg27007 vs. NCBI nr
Match: XP_022961505.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita moschata])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRF+KHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNG+EEEYDD FNDKIE
Sbjct: 1   MNAVAMRFVKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGDEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNICLDDLKEGLF+NET
Sbjct: 181 RDGKIRLLKAGESASNICLDDLKEGLFENET 211

[Close]
BLAST of Carg27007 vs. NCBI nr
Match: XP_023516115.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.5 bits (1072), Expect = 6.7e-113
Identity = 207/211 (98.10%), Postives = 208/211 (98.58%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRFLK FRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNG+EEEYDD FNDKIE
Sbjct: 1   MNAVAMRFLKDFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGDEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNICLDDLKEGLF NET
Sbjct: 181 RDGKIRLLKAGESASNICLDDLKEGLFQNET 211

[Close]
BLAST of Carg27007 vs. NCBI nr
Match: XP_022968788.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_022968789.1 single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima])

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-112
Identity = 207/211 (98.10%), Postives = 207/211 (98.10%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRFLKHFRISSSFVASRQTSSKLWLST ASGSGIDVEKNNGEEEEYDD FNDKIE
Sbjct: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTGASGSGIDVEKNNGEEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNI LDDLKEGLF NET
Sbjct: 181 RDGKIRLLKAGESASNISLDDLKEGLFQNET 211

[Close]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match: Q84J78 (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-72
Identity = 135/208 (64.90%), Postives = 163/208 (78.37%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRIS--SSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDK 60
           MN++A+R  K  R S  S    S +  SK W ST     G+        EE++++   ++
Sbjct: 1   MNSLAIRVSKVLRSSSISPLAISAERGSKSWFSTGPIDEGV--------EEDFEENVTER 60

Query: 61  IELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVE 120
            ELQP GVDPR+GWGFRGVH+AIICG++GQAP+QKILRNGRT+TIFTVGTGGMFDQR+V 
Sbjct: 61  PELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 120

Query: 121 AKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEIC 180
           A + PKPAQWHRIAVHNE LG+YAVQ+L KN+SVYVEGDIETRVYNDSI+ EVK++PEIC
Sbjct: 121 ATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEIC 180

Query: 181 VRRDGKIRLLKAGESASNICLDDLKEGL 207
           VRRDGKIR++K GES S I  D+LKEGL
Sbjct: 181 VRRDGKIRMIKYGESISKISFDELKEGL 200

[Close]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match: P18022 (Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-10
Identity = 35/114 (30.70%), Postives = 62/114 (54.39%), Query Frame = 0 

Query: 75  RGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAKDLPKPAQWHRIAVH 134
           RG++K I+ GR+G  P  + + NG  +    V T   +  R  +  ++ +  +WHR+ + 
Sbjct: 4   RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESW--RDKQTGEMREQTEWHRVVLF 63

Query: 135 NEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVRRDGKIRLL 189
            + L   A + L K A VY+EG + TR ++D  NG  + + EI V+  G +++L
Sbjct: 64  GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112

[Close]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match: P28045 (Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-10
Identity = 35/114 (30.70%), Postives = 62/114 (54.39%), Query Frame = 0 

Query: 75  RGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAKDLPKPAQWHRIAVH 134
           RG++K I+ GR+G  P  + + NG  +    V T   +  R  +  ++ +  +WHR+ + 
Sbjct: 4   RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESW--RDKQTGEMREQTEWHRVVLF 63

Query: 135 NEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVRRDGKIRLL 189
            + L   A + L K A VY+EG + TR ++D  NG  + + EI V+  G +++L
Sbjct: 64  GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112

[Close]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match: Q9CYR0 (Single-stranded DNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Ssbp1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 30/97 (30.93%), Postives = 51/97 (52.58%), Query Frame = 0 

Query: 75  RGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMF---DQRIVEAKDLPKPAQWHRI 134
           R +++  + GR+GQ PV + +     +TIF++ T  M+   D  + +  D+ +   WHRI
Sbjct: 28  RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRI 87

Query: 135 AVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSIN 169
           +V    L   A Q + K A ++VEG ++   Y D  N
Sbjct: 88  SVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124

[Close]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match: Q5RDQ0 (Single-stranded DNA-binding protein, mitochondrial OS=Pongo abelii OX=9601 GN=SSBP1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 30/97 (30.93%), Postives = 51/97 (52.58%), Query Frame = 0 

Query: 75  RGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMF---DQRIVEAKDLPKPAQWHRI 134
           R +++  + GR+GQ PV + +     +TIF++ T  M+   D  + +  D+ +   WHRI
Sbjct: 28  RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDISQKTTWHRI 87

Query: 135 AVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSIN 169
           +V    L   A Q + K + +Y+EG I+   Y D  N
Sbjct: 88  SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124

[Close]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match: A0A6J1HCE9 (single-stranded DNA-binding protein, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462062 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.8e-114
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRF+KHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNG+EEEYDD FNDKIE
Sbjct: 1   MNAVAMRFVKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGDEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNICLDDLKEGLF+NET
Sbjct: 181 RDGKIRLLKAGESASNICLDDLKEGLFENET 211

[Close]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match: A0A6J1HZ42 (single-stranded DNA-binding protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467920 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.5e-113
Identity = 207/211 (98.10%), Postives = 207/211 (98.10%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDKIE 60
           MNAVAMRFLKHFRISSSFVASRQTSSKLWLST ASGSGIDVEKNNGEEEEYDD FNDKIE
Sbjct: 1   MNAVAMRFLKHFRISSSFVASRQTSSKLWLSTGASGSGIDVEKNNGEEEEYDDFFNDKIE 60

Query: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120
           LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK
Sbjct: 61  LQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAK 120

Query: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180
           DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR
Sbjct: 121 DLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVR 180

Query: 181 RDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           RDGKIRLLKAGESASNI LDDLKEGLF NET
Sbjct: 181 RDGKIRLLKAGESASNISLDDLKEGLFQNET 211

[Close]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match: A0A6J1C1K4 (single-stranded DNA-binding protein, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007549 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.2e-101
Identity = 188/213 (88.26%), Postives = 196/213 (92.02%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRI------SSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDL 60
           MN+VA+RF KHFRI      +SSFVASRQTSSKLW ST  S S  DVEKNN EEEEYDD+
Sbjct: 1   MNSVALRFAKHFRIPSSTFPASSFVASRQTSSKLWFSTGVSESDNDVEKNNREEEEYDDM 60

Query: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120
           F+DK+ELQPQGVDPRRGWGFRGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGMFDQ
Sbjct: 61  FDDKVELQPQGVDPRRGWGFRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180
           RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVK+ASVYVEGDIETRVYNDSINGEVKNV
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKDASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGKIRLLKAGESASNICLDDLKEGLF 208
           PEICVRRDGKIRLLK  ESASNI LDDLKEGLF
Sbjct: 181 PEICVRRDGKIRLLKPAESASNISLDDLKEGLF 213

[Close]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match: A0A0A0LVY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 171/217 (78.80%), Postives = 186/217 (85.71%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRI------SSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDL 60
           MN+VAMRFL  FR       +SSFVAS QTSSK WLST AS    DVEKN+GEE++YD  
Sbjct: 1   MNSVAMRFLNRFRTPSSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDTF 60

Query: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120
            N   ELQPQGVDP RGWG+RGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  SN---ELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120

Query: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180
           RI + +DLPKPAQWHRIAVHNE LGAYAVQ+L +NASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIFDGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNI 180

Query: 181 PEICVRRDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           PEICVRRDG +RLLK GESASNI LDDLKEGLF N+T
Sbjct: 181 PEICVRRDGTLRLLKPGESASNISLDDLKEGLFSNKT 214

[Close]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match: A0A1S3BQI7 (single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492127 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.3e-87
Identity = 166/217 (76.50%), Postives = 184/217 (84.79%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRI------SSSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDL 60
           MN+V +R L  FRI      +SSFVAS QTSSK WLST AS S +D+EKN+G +++YD  
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120
            N   ELQPQGVDP RGWG+RGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120

Query: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L KNASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180

Query: 181 PEICVRRDGKIRLLKAGESASNICLDDLKEGLFDNET 212
           PEICVRRDG + LLK GESASN+ LDDLKE LF NET
Sbjct: 181 PEICVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 214

[Close]
BLAST of Carg27007 vs. TAIR 10
Match: AT4G11060.1 (mitochondrially targeted single-stranded DNA binding protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 135/208 (64.90%), Postives = 163/208 (78.37%), Query Frame = 0 

Query: 1   MNAVAMRFLKHFRIS--SSFVASRQTSSKLWLSTSASGSGIDVEKNNGEEEEYDDLFNDK 60
           MN++A+R  K  R S  S    S +  SK W ST     G+        EE++++   ++
Sbjct: 1   MNSLAIRVSKVLRSSSISPLAISAERGSKSWFSTGPIDEGV--------EEDFEENVTER 60

Query: 61  IELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVE 120
            ELQP GVDPR+GWGFRGVH+AIICG++GQAP+QKILRNGRT+TIFTVGTGGMFDQR+V 
Sbjct: 61  PELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 120

Query: 121 AKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEIC 180
           A + PKPAQWHRIAVHNE LG+YAVQ+L KN+SVYVEGDIETRVYNDSI+ EVK++PEIC
Sbjct: 121 ATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEIC 180

Query: 181 VRRDGKIRLLKAGESASNICLDDLKEGL 207
           VRRDGKIR++K GES S I  D+LKEGL
Sbjct: 181 VRRDGKIRMIKYGESISKISFDELKEGL 200

[Close]
BLAST of Carg27007 vs. TAIR 10
Match: AT3G18580.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 46/124 (37.10%), Postives = 82/124 (66.13%), Query Frame = 0 

Query: 76  GVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAKDLPK------PAQWH 135
           G+ KAI+ G++GQ P+QK L++GRT+T+F+VGTGG+ + R     + P+        QWH
Sbjct: 79  GIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWH 138

Query: 136 RIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVRRDGKIRLL- 193
           R++V+ E L    ++ +     +Y+EG++ET+++ D + G V+ + E+ +RR+G++  L 
Sbjct: 139 RVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLG 198

The following BLAST results are available for this feature:
BLAST of Carg27007 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024011.11.9e-115100.00Single-stranded DNA-binding protein, mitochondrial [Cucurbita argyrosperma subsp... [more]
KAG6590479.15.4e-11599.53Single-stranded DNA-binding protein, mitochondrial, partial [Cucurbita argyrospe... [more]
XP_022961505.17.9e-11498.10single-stranded DNA-binding protein, mitochondrial [Cucurbita moschata][more]
XP_023516115.16.7e-11398.10single-stranded DNA-binding protein, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022968788.11.1e-11298.10single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_022968... [more]
BLAST of Carg27007 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84J781.6e-7264.90Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P180228.4e-1030.70Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 G... [more]
P280458.4e-1030.70Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 G... [more]
Q9CYR01.2e-0830.93Single-stranded DNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=S... [more]
Q5RDQ02.1e-0830.93Single-stranded DNA-binding protein, mitochondrial OS=Pongo abelii OX=9601 GN=SS... [more]
BLAST of Carg27007 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HCE93.8e-11498.10single-stranded DNA-binding protein, mitochondrial OS=Cucurbita moschata OX=3662... [more]
A0A6J1HZ425.5e-11398.10single-stranded DNA-binding protein, mitochondrial OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1C1K48.2e-10188.26single-stranded DNA-binding protein, mitochondrial OS=Momordica charantia OX=367... [more]
A0A0A0LVY28.5e-9078.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1[more]
A0A1S3BQI72.3e-8776.50single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LO... [more]
BLAST of Carg27007 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G11060.11.1e-7364.90mitochondrially targeted single-stranded DNA binding protein [more]
AT3G18580.12.6e-2237.10Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 76..189
e-value: 4.3E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR10302:SF13SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIALcoord: 1..206
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 77..180
e-value: 3.9E-22
score: 78.3
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 77..186
score: 12.561519
IPR000424Primosome PriB/single-strand DNA-bindingCDDcd04496SSB_OBFcoord: 81..181
e-value: 1.44933E-16
score: 69.9485
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 1..206
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 76..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27007-RACarg27007-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
biological_process GO:0006264 mitochondrial DNA replication
biological_process GO:0051096 positive regulation of helicase activity
biological_process GO:0006260 DNA replication
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0042645 mitochondrial nucleoid
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003743 translation initiation factor activity