Carg26948 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCATGAAGTTTGAAGCTTTGATGGTGGCAATGGTGGTGGCTGTCATGGCCTTCTCCTCCTCCATTGTTGCAGCTCAAGAAGCTCCGGCGCCAAGCCCTGCCTCTGATGCTCCACTGTCCCTCCCAACTTTAATGGCTTCTCTTGCTCCTCTTGTTCTTCCCTTCTTCCTCTGA ATGGCGGCCATGAAGTTTGAAGCTTTGATGGTGGCAATGGTGGTGGCTGTCATGGCCTTCTCCTCCTCCATTGTTGCAGCTCAAGAAGCTCCGGCGCCAAGCCCTGCCTCTGATGCTCCACTGTCCCTCCCAACTTTAATGGCTTCTCTTGCTCCTCTTGTTCTTCCCTTCTTCCTCTGA ATGGCGGCCATGAAGTTTGAAGCTTTGATGGTGGCAATGGTGGTGGCTGTCATGGCCTTCTCCTCCTCCATTGTTGCAGCTCAAGAAGCTCCGGCGCCAAGCCCTGCCTCTGATGCTCCACTGTCCCTCCCAACTTTAATGGCTTCTCTTGCTCCTCTTGTTCTTCCCTTCTTCCTCTGA MAAMKFEALMVAMVVAVMAFSSSIVAAQEAPAPSPASDAPLSLPTLMASLAPLVLPFFL Homology
BLAST of Carg26948 vs. NCBI nr
Match: KAG7022018.1 (Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 98.2 bits (243), Expect = 2.5e-17 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg26948 vs. NCBI nr
Match: XP_022988237.1 (arabinogalactan peptide 13-like [Cucurbita maxima]) HSP 1 Score: 82.4 bits (202), Expect = 1.4e-12 Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Carg26948 vs. NCBI nr
Match: KAG7023913.1 (Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11 Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Carg26948 vs. NCBI nr
Match: XP_038879727.1 (arabinogalactan protein 13-like [Benincasa hispida]) HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09 Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Carg26948 vs. NCBI nr
Match: XP_011660059.1 (arabinogalactan protein 13 [Cucumis sativus]) HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06 Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Carg26948 vs. ExPASy TrEMBL
Match: A0A6J1JCI6 (arabinogalactan peptide 13-like OS=Cucurbita maxima OX=3661 GN=LOC111485538 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.9e-13 Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Carg26948 vs. ExPASy TrEMBL
Match: A0A0A0LWU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599540 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06 Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Carg26948 vs. TAIR 10
Match: AT4G26320.1 (arabinogalactan protein 13 ) HSP 1 Score: 40.0 bits (92), Expect = 7.5e-04 Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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