Carg26873 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26873
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr15: 4922950 .. 4923441 (+)
RNA-Seq Expression	Carg26873
Synteny	Carg26873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATCCTTCCTCAAACAAACGTCTCCGAGTCGACTCAGTCGACTCGGAGTCCGACTCTCCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGATCTCCTCGACGACGCCGATCCCGATCCCGTCGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTTTCTTCTCCGCCGCCGTTGCCGGCGGCTCCCGGTGAGTCGTTGCCGGAGCTCGGCTACCTTCTCCTAGCCTCCGACGATGAACTCGGTCTCCCACCTTCCGACGCCTCCACCAGTCAAGGCGGTGAGTCGGAGGTCGCCGAACTGACACGTGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGCTTCGAGTTGGGGGAAGGAGAGAGATTCTACAGTGACAGTGAATATGTGGCGTTCGATGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGA

mRNA sequence

ATGGAGGATCCTTCCTCAAACAAACGTCTCCGAGTCGACTCAGTCGACTCGGAGTCCGACTCTCCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGATCTCCTCGACGACGCCGATCCCGATCCCGTCGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTTTCTTCTCCGCCGCCGTTGCCGGCGGCTCCCGGTGAGTCGTTGCCGGAGCTCGGCTACCTTCTCCTAGCCTCCGACGATGAACTCGGTCTCCCACCTTCCGACGCCTCCACCAGTCAAGGCGGTGAGTCGGAGGTCGCCGAACTGACACGTGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGCTTCGAGTTGGGGGAAGGAGAGAGATTCTACAGTGACAGTGAATATGTGGCGTTCGATGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGA

Coding sequence (CDS)

ATGGAGGATCCTTCCTCAAACAAACGTCTCCGAGTCGACTCAGTCGACTCGGAGTCCGACTCTCCGGAGGTCAAGCGTCTTAAAGACGACCTCCTCGATCTCCTCGACGACGCCGATCCCGATCCCGTCGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTTTCTTCTCCGCCGCCGTTGCCGGCGGCTCCCGGTGAGTCGTTGCCGGAGCTCGGCTACCTTCTCCTAGCCTCCGACGATGAACTCGGTCTCCCACCTTCCGACGCCTCCACCAGTCAAGGCGGTGAGTCGGAGGTCGCCGAACTGACACGTGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGCTTCGAGTTGGGGGAAGGAGAGAGATTCTACAGTGACAGTGAATATGTGGCGTTCGATGGACTGTTTGAACATTCCGATGTGTACTCCGTTTTCTCGTGA

Protein sequence

MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISPVSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMGEIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS

Homology

[Close]

BLAST of Carg26873 vs. NCBI nr
Match: KAG7016709.1 (hypothetical protein SDJN02_21819, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.1 bits (788), Expect = 4.4e-80
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Carg26873 vs. NCBI nr
Match: KAG6579197.1 (hypothetical protein SDJN03_23645, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.8 bits (787), Expect = 5.7e-80
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPV+QDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVIQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Carg26873 vs. NCBI nr
Match: XP_023550642.1 (uncharacterized protein LOC111808724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIPSFEL EGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSFELEEGERFYSDSEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Carg26873 vs. NCBI nr
Match: XP_022993320.1 (uncharacterized protein LOC111489362 [Cucurbita maxima])

HSP 1 Score: 297.4 bits (760), Expect = 7.8e-77
Identity = 160/166 (96.39%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSS KRLRVDS DSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPP PAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIP---SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIP   SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Carg26873 vs. NCBI nr
Match: XP_022939169.1 (uncharacterized protein LOC111445164 [Cucurbita moschata])

HSP 1 Score: 295.0 bits (754), Expect = 3.8e-76
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSSNKRLR   VDSESDSPEVKRLKDDLLDLLD ADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLR---VDSESDSPEVKRLKDDLLDLLDGADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 160

[Close]

BLAST of Carg26873 vs. ExPASy TrEMBL
Match: A0A6J1JY78 (uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.8e-77
Identity = 160/166 (96.39%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSS KRLRVDS DSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPP PAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIP---SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIP   SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Carg26873 vs. ExPASy TrEMBL
Match: A0A6J1FGC2 (uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC111445164 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           MEDPSSNKRLR   VDSESDSPEVKRLKDDLLDLLD ADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLR---VDSESDSPEVKRLKDDLLDLLDGADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 160

[Close]

BLAST of Carg26873 vs. ExPASy TrEMBL
Match: A0A6J1H3R7 (uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC111460226 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.1e-68
Identity = 145/166 (87.35%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           M D SSNKRLR+DSVDSESD+PEVKRLKDDLL LL+DADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLEDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPP LPAA  ESLPELGYLL+ASDDELGLPPS+ASTS GGE+E AELTRASSESSGMG
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAIP---SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDAIP   SFELGEG RFY+D+EYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Carg26873 vs. ExPASy TrEMBL
Match: A0A1S3BDY1 (uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 133/167 (79.64%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           M++ S NKR RVDS+DSESDSPEVKRL+DDLL LLDD+DPDP VQDLDSVIQSFADEISP
Sbjct: 1   MDNHSPNKRFRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSVIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPP PAAP     ELGYLLLASDDELGLPPSDASTS GGE+EV E+ R SSESSG+G
Sbjct: 61  VSSPPPPPAAPS----ELGYLLLASDDELGLPPSDASTSHGGETEVVEVARGSSESSGIG 120

Query: 121 EIWGFEDAIPSFE----LGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           EIWGFEDA+PS+E    +G GERFY++ EYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAVPSYETLELVGGGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Carg26873 vs. ExPASy TrEMBL
Match: A0A0A0K873 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 130/167 (77.84%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60
           M+  S NKRLRVDS+DSESDSPEVKRL+DDLL LLDD+DPDP VQDLDS+IQSFADEISP
Sbjct: 1   MDHHSPNKRLRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSLIQSFADEISP 60

Query: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120
           VSSPPP PAAP     ELGYLLLASDDELGLPPS ASTS GG++EV EL R SS+SSG+G
Sbjct: 61  VSSPPPPPAAPS----ELGYLLLASDDELGLPPSHASTSHGGQTEVVELARESSDSSGIG 120

Query: 121 EIWGFEDAIPSFE----LGEGERFYSDSEYVAFDGLFEHSDVYSVFS 164
           +IWGFEDA+PS+E    +G+GERFY++ EYVAFDGLFEHSDVYSVFS
Sbjct: 121 QIWGFEDAVPSYETLELVGDGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Carg26873 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 9.9e-30
Identity = 82/164 (50.00%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 3   DPSSNKRLRVDSVD-SESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  DSPEVKRL+DDL D+LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPPL-PAAPGESLPELGYLLLASDDELGLPPSDA------STSQGGESEVAELTRASS 122
           ++      +  GE+ P+LGYLL ASDDELGLPP  +      +  +     V +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSF-ELGEGERFYSDSEYVAFDGLFEHSD 158
           +SSG+ EIWGFED + ++  L  G       +YVA +GLFE SD
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSGVGDGGDYVAVEGLFEFSD 175

[Close]

BLAST of Carg26873 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28
Identity = 78/163 (47.85%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 3   DPSSNKRLRVDSVD-SESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  DSPEVKRL+DDL D+LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPPL-PAAPGESLPELGYLLLASDDELGLPPSDA------STSQGGESEVAELTRASS 122
           ++      +  GE+ P+LGYLL ASDDELGLPP  +      +  +     V +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSF-ELGEGERFYSDSEYVAFDGLFEHS 157
           +SSG+ EIWGFED + ++  L  G       +YVA +G F ++
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSGVGDGGDYVAVEGFFYYT 174

[Close]

BLAST of Carg26873 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28
Identity = 81/164 (49.39%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 3   DPSSNKRLRVDSVD-SESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  DSPEVKRL+DDL D+LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPPL-PAAPGESLPELGYLLLASDDELGLPPSDA------STSQGGESEVAELTRASS 122
           ++      +  GE+ P+LGYLL ASDDELGLPP  +      +  +     V +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSF-ELGEGERFYSDSEYVAFDGL-FEHS 157
           +SSG+ EIWGFED + ++  L  G       +YVA +GL F HS
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSGVGDGGDYVAVEGLSFFHS 175

[Close]

BLAST of Carg26873 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 74/174 (42.53%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 1   MEDPSSNKRLRVDSVDS-------ESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQS 60
           MED    +  R DSV +       + DSP+VKRL+D   DL DD+  DPV QDLDSV++S
Sbjct: 1   MEDLLEERLTRTDSVGNKRVRDGLDLDSPDVKRLRD---DLFDDSGLDPVSQDLDSVMKS 60

Query: 61  FADEISPVSSPPPLPAAPGESLPELGYLLLASDDELGLP----PSDASTSQGGESEVAEL 120
           F +E+S  ++      + GE+ P+LGYL  ASDDELGLP    P         E  V EL
Sbjct: 61  FENELSTTTA----ALSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTEL 120

Query: 121 TRASSESSGMGEIWGFEDAIPSF---ELGEGERFYSDSEYVAFDGLFEHSDVYS 161
            RASS+SS +GE+ GFED +  F   +LG+      D  +  FDG  +  D++S
Sbjct: 121 VRASSDSSEVGELCGFEDHVTEFGPCDLGD------DGLFEYFDGCLDSGDLFS 161

The following BLAST results are available for this feature:

BLAST of Carg26873 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016709.1	4.4e-80	100.00	hypothetical protein SDJN02_21819, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6579197.1	5.7e-80	99.39	hypothetical protein SDJN03_23645, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023550642.1	3.7e-79	99.39	uncharacterized protein LOC111808724 [Cucurbita pepo subsp. pepo]	[more]
XP_022993320.1	7.8e-77	96.39	uncharacterized protein LOC111489362 [Cucurbita maxima]	[more]
XP_022939169.1	3.8e-76	97.55	uncharacterized protein LOC111445164 [Cucurbita moschata]	[more]

BLAST of Carg26873 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg26873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JY78	3.8e-77	96.39	uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362...	[more]
A0A6J1FGC2	1.9e-76	97.55	uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1H3R7	7.1e-68	87.35	uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A1S3BDY1	1.3e-61	79.64	uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=...	[more]
A0A0A0K873	2.4e-60	77.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1	[more]

BLAST of Carg26873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	9.9e-30	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	9.3e-28	47.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	9.3e-28	49.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	1.1e-20	42.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	PANTHER	PTHR34539:SF19	T6J4.11 PROTEIN	coord: 3..159
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 3..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26873-RA	Carg26873-RA	mRNA