Carg26857 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCATTTTTATCCAACATTTGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATTGTGTGTTTCTTCCTTCCTTCACCCGTTTTCTGGAAACTCATCGACGGAGAAGAGAGAAGCAGTCTGTTCGGAAAATTCGCAGATCTCCGAGTCACCAGAAGAATTCAAGCTGTCACTGGACGAAGAAGGCGACGCGATTTGAAGTACACACAGACATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTACATCTCGAGCTAATCCCATGTATCTACAGTACCTTCGTCGAATTGTCAAGGTTCTCTCACTCCCTCAGATTATGTCTATTTTCCACCCCTAGCAGATCCGTTCTATATGTTAATCAAACTGCTACTTTTCGCATCCAATTTGTTTAAGGATTCATCTTCACGTATATGGCTGATGAAGACTGTATACGATCATCTGATTTAATGTTGTTGTTCTTTGAGGAATCTGTATGCCTTTATCTTTTTTCTCTGTGTTAGCATTGGTGGAACAGTGTTGTTATAGTTCCTTCCGAAATTTTGTTCTTATTTTGTATTTTAACCGCGATTCTTCCTACCTGCTTTGTTTCGGTTAGATCATTTGTTGTTTTGTTATTCGTGATTTGCATTACGCTGTTTGATCCCCGATGTATTGGTTGCGTGCCACGTGGAGTCTTGGATCTTGTGAATTCAAGCTACTGTATAGTTAGATTGTTCGGCGAGAGCAACTGGATTTGTAATGTAACTTATTGCTTCCCCAACATGCTTTGGCTAGTTCTGTTCTCTTTGCAGTTCTTGAAATTTTGTCATCTTCATGTTTTACAAAAAATTTGTCGGAAATTGGCCCCAAAATGAAACTAATATTTTTTTTTATTAATCGCCTTCTTATGACATGTTGCTTGCTTGATGCCATTAATTTCACAAGTCATCACTTTATCTGGCTAATTGCAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCAACTATGCACTTCACCGAAAGTTGTGTACGTATTGGTTCTTATTGACTATTGTCACTCACTAAGAGATGATTCGAACTTTGTTTCAAGTTTAATTTTAGCCCTTTCCTAATGGTTCGTATTTGGATTTTTGGTTGAATTTTTCTATGGACCCAGCTATCAGCATACCAAGTATCACAAGCGTAAGTACATCTCCCACCAAAGAGTTCTTTATTTTATTTTATTTCTACTGATTTTAATGGTGCTGAAAAATCTGTTATTGTACTCATTCGCTTTACAGTTATGTGTAATTCAGTTTATAAGTTGTTTAGATCTTTTGCAATATACACTTTGCTCTTTAACTTTGTGTTGAGTTTCTCTCATGGTTAATACTACCAATGTAACATGCTATTAGGTGAAGGTAGTGAATTAAATTCAAAACGTATTCCTTTTCTAAAACATGCAGGGTTTTGAATTCAGGTTGATACATAGAAGTATTGGATTAGCATGCGTATTTCTGAGGGGAAGCTCATTGCTATATTCTAAATGGCAATTGTGAAATAGGTGATGGAGCCGTGGAGGTGGACCATTAAATTTTGGGAGACTGATTCTTGGGTCTCCGACTCTTGCTTGTTTGTGTGCTTCTCTTAGGTCTCAATTCTTGCTTGTTAGCTTCCTTGTTGTGTTGGGATGTTTCTCATAATATTAATCTCAGAAGCTATTGGGTAGAGAAATTATCATCAATCTAAAATCATAATCTAAGTAGCATTGAAAGTTCAAATCTAATCATTTTCTAATTGATATAGTGGGTTCTAGTTATACTGAGACCAGTTGAGAGTGTTGGTGTGGGCTTTGCACGTGTTCTGTTGAATTGATGCTTATTGTAAGAATAGGTTTTCGAGCTTTGCACATAATTGGTTCAAGAGAAAAGTGATGGCGATGGTTCTTTTATCTTGAGGATCTGATACCTAGTTCTTATTTTCTGTATGTCTATTTCTTGTCCGTGTTGGGTATTTCTCAAATCCTCTTACGGTCGGGATTTGTGATTTTGTCAATTGATTTTTCCATCGCATACTAGTTAGCTAGATGTTCAGTGATTGATGGGTAGAAGTTCATTGGGTTATTTGACAGAGAGGTGGCGTTTCTAGTTGAAATTGAATCAAAGAACTCTCCAACATTGTTATGAAGTTAACAAACTTGACTACATACGCTATTACATGGGGGTCATAACTAGTGTAGCGTTTACGCCCAAGATCAACACTTTTCTATTTGAATGTGATTTTATCATTATATTTATTTGATGTGCATAAAAATTTATGGGATGTCACAAAAAGGCTTTCCCAATTGACAAATTTTATTTTATGGGATGTCTATTTTCATCTGAAAATGACAAAAAAAAAAAAAAAAAAAAAAGTGGGTTAGCAATCTTCTTTTTCTGGCTTAAAAGGAACAATAGAACGTTTGGTAGAAAGGGGAGAAACCTTATTTATCTTTATCATCTCATTTTGTATGCAGCAGCTACTTATTGTAAGATAGTTTTTCTAGAGGAGATTTTTCTAACCTACATTAGCCTTGGAGGTCTTCATCTCCTTTGTATATTTCATTGGATTAATGAAATTTGTTACCCTTTCCAAAAGAAAAAAGAAGAAGTCTTAACATTAGATATAATATGTATGATATAAAGATTTTCCATTTATTAGAACTTAAATGAAAAGATGTTTTTTTTTTTTGTTCTTGTGTCAGAAACTAAGAATCAATGGGCACGTGACGATCCTGCTTTTGTTGTGATTTGCAGTCTTCTTTTGGCAGTTGCAACTTTGGCTTACTGTGCTGCGTAAGTGTATTCAATGCTTCTATGTAGTATCTCATCTCTTTGTTGGTTTATTTTATGATGAAGTGCATCCATTAAGGTAGGTCCTTCCCAAAATATTTGTCTGACTATTTGTGTGTGTGTGTGAGAGAGAGAGGCTTGAGAAGGTGTATCGGCCTCTTCCTCTTTGGCACAATGAACAAATAGACATGCACATACAAAAACACAAACAATAAATAAATTGAAAGAAACATGCACACCTATACACTTCATGTGATAATTGTTTTCTCTTCTCTTGATTTGTTGCAATTGGACTTATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTAAGAAGTTGTCTATTAAGAAAGACAGCTAATTTATGCCTTTGTTGTGTTTTCTGATTGTCAAATTTTGTTAACAATTTCAGATATGATCATAGTGCATCACATGCCACCTTTGTTGTTATTTCAGTACTGCTCTCTCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGTAAGCTATTTCCCTGCTGTGATTGCATATTACTAAATGATCTTATCAACAACTTATTTTTTGTCAGCACAAGAAATAATCATTTGCTATCATCTTGAATGCATCTTACTCCTAGAGATTGACTGATTATTTATTCTCTTGGCTGTTTTGATTTGCTTTTTGGACTTGAATCATCCTAATCAGATGTGCCTTGTCTAATGCTTTCTTGACTTCAATTTCAGATATTCGTTTCTGCACTGAGTAAAATAGGCATATGAACAATATAAACTAAGTTAGATAAAGGGTGATCAGTTAGTTTGACTACACAACGAAAAAATTCCCAGAACGATTCATCTCTTTTCGTATATTTTGGTTGCTCTTATCTTGTAGATAATGGTTGGCGTCAGCACCAAGAATATGAGACACCCTAATTTGATGTAGCATATTATGTGCCTGTTTGGAATGAATTTCCAATGCTGACACTTTTAGCACTTGAAATCCTTTTATTAAGCACTGAGAAAGCATCATTCCAAATAGGTCTTAAATCGATAACTAACTGTTACACCTGTTGGGCATGAGCTTCAATAATTATCCATTCCTTTATCATCTAAAGAGATATGTGGCTTAAAACAAAGAATATAAATTTTAGCTGTTTCCCTTTCCCTTTTTGAGGACCCCTGTATTCTGATACAGTTTTCTTTTAAATACCTGTATTAAGTTATGTTGAAGTTTCGTGTCTAGTTTCTATCCGTTCACAACTTGTTAATGCTGAATTACTATCACAGTTGAACACTCGAGCATCTGTATGAAGTTCACTCATTTCTCTATCTTTATTGTTGAAAATATTTCTATAGTATGCTGATCTAATTTATAGTGAGCAATTTCATTACTTAAATGTACTTTCAGGTTATTAACAAATGCTTACCTTCGGGAAGAGACACCAGGCAGTCATGTAGTTGAGCAACGGGTTGAATGGCAAGATCTACCACTCTAAATTTTAGCTTTATTGAGTATTTCTTATAACTTCATTTCAACTTTTGTTAGTTTTTAGTTCTGCATTTTTATTGGCCTTTTGGATTTTGGTATTCTATCATATTTAAGCAATGTCTTCCCATTGAGCCTTATAAATTAGTGGATTGATATATGGTTTATTTATTTATCTATTTATTTTTGACTGGTTCAAGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTCGTTTTGCTTTACGGTAAGTATGATGAAGGTTTCTGTTTGTTTTTTTTTGTTTTCCAGCATCTATGATACCACTCTGAAGTATTGGTTTCCTTGCAGTGATCCATTATTTCATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCGTTATTGCTATCAAATTTACTTTTCATGATTGGGGCTTCGTATTACCATTACGTCAACTTTTTAGGTTATGATGGTAAGCTATGTTTTCTTCTCTTATTTCTGTCCAATCTGTATATCTTTGTGTTGATTCAATATGGCTAGAGGTAGATTGAACCAGAGAGGATAAACCTTTTTTCTCTTCATGGCTAGAACTTTTGGCTCATTTAGAAATGTCAGGTGGGTGCCACTTAGGAAGTTCAATGTGAATTTAGGAAAAGCATTAGTTAAGTGCTTGTGCTTCTAAAAGTAACATACTTTTAATTCATGTTTCCGAACACTACAAAAATTCGAAAAAGTGCCTTTTTATTTCATTTATTTATTTGAATAAGAAGCTGAGGTTTCATCATTTTTAGAAAGTAGATGGCAAAAGAAAGAAACTTATAGGCGAATGTAGTACCAAAAGATCTAAGAATAAAAAATCAAATGATTATGAAAAGGGTGCGAGTTTCTGTCACTTCTAAGTTTCCCGTTAGCCGCAAGATTGCTTGCATGAAATTATTGACCGTGTGCCCTAATGCAGTACTGCCATTTTTGGAGAAAACTACGTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTTCTTACTCCAATCTGTAAGTCATAATGAAACCCTCAACTCCCTGTTTCTGAGCTCTCATTCTGAAAGTAAATTTCACTTTCCTTTTATGGCTGCAGTTATCTTGATTGGCTTCAACCCATCAAGATATTTCATGAATATGTACTTCAGTCGGAACTTATAATCTCGAGTTACGGATTCGGCTACACCTACCTTGAGGAGGAGGCGCAGGATTGATAGATCAAAGATTTATTTTTCACTTGCATCTTGAAAAGAAATGAGGAAGTGTGTGGATGGATACAGCCTCAGTTGCTAATTTTTCAGGCCATTGGTGAGCGATATCAGGAAGTGTAGTGCATCAGGGCTGCAAGTGAGTTAACGCGGCTGAATTTTTGTTTGATGAAATAGATGATATTTGTTGGATGTAATGATTTTTAGCTGATACATTGTTTGCAGTTTACACAAAGCACTTGAAAAGAAAATTAATTCCATCTGCCTTTCTGAATGTGTTTGTCAATGTGCAGAGAGAGACCTTTTATTTAGATCTCTTAAACTGCTTTCCATTTGACCAGAAACTGATGCCTTATTCCCTTCGCCATCTTTTGACTGGTGCTGGAAAAGGATGTCTTATGAACTGCAAATCACAAACTGGAACCAACTCAACTTTTCAATGGAATACCATAATCTCCCAGAATTATTCACTTTTTTCTTTTC AATCATTTTTATCCAACATTTGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATTGTGTGTTTCTTCCTTCCTTCACCCGTTTTCTGGAAACTCATCGACGGAGAAGAGAGAAGCAGTCTGTTCGGAAAATTCGCAGATCTCCGAGTCACCAGAAGAATTCAAGCTGTCACTGGACGAAGAAGGCGACGCGATTTGAAGTACACACAGACATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTACATCTCGAGCTAATCCCATGTATCTACAGTACCTTCGTCGAATTGTCAAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCAACTATGCACTTCACCGAAAGTTGTCTATCAGCATACCAAGTATCACAAGCAAACTAAGAATCAATGGGCACGTGACGATCCTGCTTTTGTTGTGATTTGCAGTCTTCTTTTGGCAGTTGCAACTTTGGCTTACTGTGCTGCATATGATCATAGTGCATCACATGCCACCTTTGTTGTTATTTCAGTACTGCTCTCTCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTCGTTTTGCTTTACGTGATCCATTATTTCATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCGTTATTGCTATCAAATTTACTTTTCATGATTGGGGCTTCGTATTACCATTACGTCAACTTTTTAGGTTATGATGTACTGCCATTTTTGGAGAAAACTACGTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTTCTTACTCCAATCTTTATCTTGATTGGCTTCAACCCATCAAGATATTTCATGAATATGTACTTCAGTCGGAACTTATAATCTCGAGTTACGGATTCGGCTACACCTACCTTGAGGAGGAGGCGCAGGATTGATAGATCAAAGATTTATTTTTCACTTGCATCTTGAAAAGAAATGAGGAAGTGTGTGGATGGATACAGCCTCAGTTGCTAATTTTTCAGGCCATTGGTGAGCGATATCAGGAAGTGTAGTGCATCAGGGCTGCAAGTGAGTTAACGCGGCTGAATTTTTGTTTGATGAAATAGATGATATTTGTTGGATGTAATGATTTTTAGCTGATACATTGTTTGCAGTTTACACAAAGCACTTGAAAAGAAAATTAATTCCATCTGCCTTTCTGAATGTGTTTGTCAATGTGCAGAGAGAGACCTTTTATTTAGATCTCTTAAACTGCTTTCCATTTGACCAGAAACTGATGCCTTATTCCCTTCGCCATCTTTTGACTGGTGCTGGAAAAGGATGTCTTATGAACTGCAAATCACAAACTGGAACCAACTCAACTTTTCAATGGAATACCATAATCTCCCAGAATTATTCACTTTTTTCTTTTC AATCATTTTTATCCAACATTTGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATTGTGTGTTTCTTCCTTCCTTCACCCGTTTTCTGGAAACTCATCGACGGAGAAGAGAGAAGCAGTCTGTTCGGAAAATTCGCAGATCTCCGAGTCACCAGAAGAATTCAAGCTGTCACTGGACGAAGAAGGCGACGCGATTTGAAGTACACACAGACATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTACATCTCGAGCTAATCCCATGTATCTACAGTACCTTCGTCGAATTGTCAAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCAACTATGCACTTCACCGAAAGTTGTCTATCAGCATACCAAGTATCACAAGCAAACTAAGAATCAATGGGCACGTGACGATCCTGCTTTTGTTGTGATTTGCAGTCTTCTTTTGGCAGTTGCAACTTTGGCTTACTGTGCTGCATATGATCATAGTGCATCACATGCCACCTTTGTTGTTATTTCAGTACTGCTCTCTCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTCGTTTTGCTTTACGTGATCCATTATTTCATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCGTTATTGCTATCAAATTTACTTTTCATGATTGGGGCTTCGTATTACCATTACGTCAACTTTTTAGGTTATGATGTACTGCCATTTTTGGAGAAAACTACGTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTTCTTACTCCAATCTTTATCTTGATTGGCTTCAACCCATCAAGATATTTCATGAATATGTACTTCAGTCGGAACTTATAA NHFYPTFEEREREREREHCVFLPSFTRFLETHRRRREKQSVRKIRRSPSHQKNSSCHWTKKATRFEVHTDMLPTASRGRSSSSTSRANPMYLQYLRRIVKWQQMDIEYTFWQMLQLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSASHATFVVISVLLSHLLITGAILATCCWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMYFSRNL Homology
BLAST of Carg26857 vs. NCBI nr
Match: KAG7022476.1 (Protein unc-50-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 594.0 bits (1530), Expect = 7.4e-166 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Carg26857 vs. NCBI nr
Match: XP_022927867.1 (protein unc-50 homolog [Cucurbita moschata] >KAG6588691.1 Protein unc-50-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.9 bits (1130), Expect = 1.8e-119 Identity = 229/252 (90.87%), Postives = 229/252 (90.87%), Query Frame = 0
BLAST of Carg26857 vs. NCBI nr
Match: XP_023531136.1 (protein unc-50 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.3 bits (1126), Expect = 5.2e-119 Identity = 227/252 (90.08%), Postives = 229/252 (90.87%), Query Frame = 0
BLAST of Carg26857 vs. NCBI nr
Match: XP_022988909.1 (protein unc-50 homolog [Cucurbita maxima]) HSP 1 Score: 438.0 bits (1125), Expect = 6.7e-119 Identity = 228/252 (90.48%), Postives = 229/252 (90.87%), Query Frame = 0
BLAST of Carg26857 vs. NCBI nr
Match: XP_004136958.1 (protein unc-50 homolog [Cucumis sativus] >KGN43880.1 hypothetical protein Csa_017158 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 8.2e-117 Identity = 223/252 (88.49%), Postives = 227/252 (90.08%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy Swiss-Prot
Match: Q54DD7 (Protein unc-50 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292320 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 5.5e-47 Identity = 104/247 (42.11%), Postives = 151/247 (61.13%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy Swiss-Prot
Match: Q53HI1 (Protein unc-50 homolog OS=Homo sapiens OX=9606 GN=UNC50 PE=1 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32 Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy Swiss-Prot
Match: Q9CQ61 (Protein unc-50 homolog OS=Mus musculus OX=10090 GN=Unc50 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.2e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy Swiss-Prot
Match: O55227 (Protein unc-50 homolog OS=Rattus norvegicus OX=10116 GN=Unc50 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.9e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy Swiss-Prot
Match: Q3ZBG6 (Protein unc-50 homolog OS=Bos taurus OX=9913 GN=UNC50 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.5e-32 Identity = 81/222 (36.49%), Postives = 128/222 (57.66%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy TrEMBL
Match: A0A6J1EIE3 (protein unc-50 homolog OS=Cucurbita moschata OX=3662 GN=LOC111434634 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 8.6e-120 Identity = 229/252 (90.87%), Postives = 229/252 (90.87%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy TrEMBL
Match: A0A6J1JMX0 (protein unc-50 homolog OS=Cucurbita maxima OX=3661 GN=LOC111486121 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 3.3e-119 Identity = 228/252 (90.48%), Postives = 229/252 (90.87%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy TrEMBL
Match: A0A0A0K2I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071690 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 4.0e-117 Identity = 223/252 (88.49%), Postives = 227/252 (90.08%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy TrEMBL
Match: A0A5D3C4E1 (Protein unc-50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00950 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.5e-116 Identity = 222/252 (88.10%), Postives = 226/252 (89.68%), Query Frame = 0
BLAST of Carg26857 vs. ExPASy TrEMBL
Match: A0A6J1D6A1 (protein unc-50 homolog OS=Momordica charantia OX=3673 GN=LOC111017322 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.5e-116 Identity = 222/252 (88.10%), Postives = 226/252 (89.68%), Query Frame = 0
BLAST of Carg26857 vs. TAIR 10
Match: AT2G15240.1 (UNC-50 family protein ) HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-109 Identity = 195/252 (77.38%), Postives = 213/252 (84.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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