Carg26850 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26850
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	C2 domain-containing protein
Location	Carg_Chr11: 8824023 .. 8826674 (+)
RNA-Seq Expression	Carg26850
Synteny	Carg26850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTCATTGTTTCGTAGGTTTCAAGAATCTTGTGAATATTCTATTCTGTTCTGTGAATTTGATTCGTTTTTTTTGGTTTTGTTTCGTGGGTCGAAGAAACAGAACAATTTAGGGCGAAGTCGACTTTAGAAAACCCCGCTCCATTATCTTTTGTTGATTCTTCTATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGGTATGTCTGTTTAGTTCTGTTTTTGAAAATTGTGTATGATTATTGATCAATCTTTCCCTCCAAAATGAAATATGAAATTGATTTCGTTTGTTTATGTTATTTTGGGTCAGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGGTTATGTTTTGGATTTTCCTTGTTGGTTGTGTTTAATTTGGTTAGATCTAATGAGATGAACATGAACTGAATGTGAATTTGATTGGCATTGTATGTATAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAGTAAGATTTATGTTCTTTCTTCCTTTTTGTTTGAACTTGTGTTCATGTTTTTCATTTGGGTATTGAGTTTTGAATGTTCTGTTTTGTAGAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGGTATGATATGGCTTTGAATTTGTTTGATATAATTTTGCCTGAAGCTTTTACTTGCTAGCGAATTACTTTTCTTTCAGGGATTTTCCATGTTTTCAAGGTTAGGATGTTAAAATAGCTATTGAGTTTGGTTTAGCCATCACCCCTTCTTGTGACCTGCCTTCCTATCTTACAGAGAAATTTCTCCGATATTAGCTGACTCAATAAATGTGAGATCCCACGTTAGTTAGAGAGGGAAACGAGTTCCAGCGAGGACGCTGGGCCTTGAAGGGGGTGGGTTGGGAGATCCCACTTTGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACTTTGAGAGGAAGGTCGAAAGGGAAAGTTTAGAGAGGACAATATCTGCTAGTGGTGAGCTTGGATTGTTACAAATGATATCAGAGCCAGACATTGGGCGATGTGCTAGCGAGGAGGTTGTGCCCCGAAGGGGGGTGGACACAAGGAGGTGTGCCAACAAGGATGTTGGGCCCCAAAGGGGGTGGATTGAGGGGTCCTATATCGATTGGAGAAGGGAATGAGTACTAGCGAGAACGCTGACCTTGAAAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACCAAGGGTTTTTTATAAGGGTGTGGAGACCTCTCCCTAATAGACACGTTTTAAAAACCTTGAGGGGAAGTTCGAAAGAAAAAGCCCAAAGAGGACAATATCGGGGTTGTGTGCTGTTACAAATGGTATCAGAGCTAGACACCGGGTGATGTGTCAGTGAGGAGGCTGAGCCTTGAAGGGGGTGGACACGAGGCAGTGTGCCAATAGGACATTGGGCCCCAAAGGGGAGTGGATTGGGAATCCCCAACGGTTTTGATTTCTTTTCATTTTTGTTTGTTTTGAATGAAAATTGACTTTCTTTATCAACTTGAAGAGTTGGCCTACACAGCACAGTGCTGACTTCTTTTCGAGATTCACATTGCATTTCTTCTATGTGCTTTTCGAACGCAATTTGAACTAAAAGCGTTCGTCGTTATTTACGATTTGTCTGGATCATTTGTTCGTTTTCGTTATTATTCTTTTGATATCTCACCGAGCAGAACGAAAAACGTCATTTCCCATGAGTCCATAATAAAAAGCTTTAACATTCACTTTTACCTTATTGTAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATGTAAGTGATATTTGTATTATGCCTTTAGTTACTGGTAAAAAACAATCCATTCCTGATAGTATAAGATTCCGACCTATCTGTTTTGGTTGTAGAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGTACGTTTACGTTTTAAATGCTCTGTTAAATGGAATCATAATGCAACTAAAACTTGCTTCTGTGTGCGTGTGTGTGCGTCGTTGTCGTCTCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCTCAAGGTTGGGTCTCAATGATCTCTCCATAAGTTGTATAGAAACTTCTGCTAATATATTTATATATATTTG

mRNA sequence

TTGTTCATTGTTTCGTAGGTTTCAAGAATCTTGTGAATATTCTATTCTGTTCTGTGAATTTGATTCGTTTTTTTTGGTTTTGTTTCGTGGGTCGAAGAAACAGAACAATTTAGGGCGAAGTCGACTTTAGAAAACCCCGCTCCATTATCTTTTGTTGATTCTTCTATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCTCAAGGTTGGGTCTCAATGATCTCTCCATAAGTTGTATAGAAACTTCTGCTAATATATTTATATATATTTG

Coding sequence (CDS)

ATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

Protein sequence

MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPPPQY

Homology

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BLAST of Carg26850 vs. NCBI nr
Match: KAG7022469.1 (Elicitor-responsive protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.8 bits (1283), Expect = 2.6e-137
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK
Sbjct: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. NCBI nr
Match: XP_022927815.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 489.6 bits (1259), Expect = 1.6e-134
Identity = 240/243 (98.77%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPH QASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHLQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. NCBI nr
Match: XP_023531347.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 2.7e-134
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINV VWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVAVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMYASPF SGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYASPFPSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. NCBI nr
Match: KAG6588683.1 (Elicitor-responsive protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-133
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 8   GQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIE 67
           GQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIE
Sbjct: 59  GQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIE 118

Query: 68  GIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHF 127
           GIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHF
Sbjct: 119 GIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHF 178

Query: 128 ATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSYPPNNG 187
           ATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSYPPNNG
Sbjct: 179 ATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSYPPNNG 238

Query: 188 AYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPPPQY 244
           AYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPPPQY
Sbjct: 239 AYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPPPQY 294

[Close]

BLAST of Carg26850 vs. NCBI nr
Match: XP_022988903.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988905.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 474.9 bits (1221), Expect = 4.0e-130
Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQD YVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDSYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHP TPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPPTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMY+SPF SGYPPSSYPPPSSAYP APYP HPQASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYSSPFPSGYPPSSYPPPSSAYPPAPYPLHPQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. ExPASy Swiss-Prot
Match: Q25AG5 (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-12
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           +QG  LEV+++G   L++T+++   DPY  L+  S   +++     G +P + E F+FS+
Sbjct: 2   VQG-TLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 61

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
                E+ + + +S++ T DDF+G   I L  +  EG    T     K   + GE+++ L
Sbjct: 62  THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGL 121

Query: 126 HFATAD 132
            F   D
Sbjct: 122 TFTPED 126

[Close]

BLAST of Carg26850 vs. ExPASy Swiss-Prot
Match: Q0JBH9 (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-12
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           +QG  LEV+++G   L++T+++   DPY  L+  S   +++     G +P + E F+FS+
Sbjct: 2   VQG-TLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 61

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
                E+ + + +S++ T DDF+G   I L  +  EG    T     K   + GE+++ L
Sbjct: 62  THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGL 121

Query: 126 HFATAD 132
            F   D
Sbjct: 122 TFTPED 126

[Close]

BLAST of Carg26850 vs. ExPASy Swiss-Prot
Match: Q9C8S6 (16 kDa phloem protein 2 OS=Arabidopsis thaliana OX=3702 GN=PP16-2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 33/121 (27.27%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 11  LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIR 70
           LEV+++    L+D ++++  DPYV L   + + ++      G  P + E F+F++ EG  
Sbjct: 6   LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTT 65

Query: 71  EINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATA 130
           E+   +++ +  T DD +G   I L  V  EG    T     K   + GE+ + L F  +
Sbjct: 66  ELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 125

Query: 131 D 132
           +
Sbjct: 126 E 126

[Close]

BLAST of Carg26850 vs. ExPASy TrEMBL
Match: A0A6J1EPZ8 (elicitor-responsive protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434593 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 7.7e-135
Identity = 240/243 (98.77%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPH QASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHLQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. ExPASy TrEMBL
Match: A0A6J1JNP1 (elicitor-responsive protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486118 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQD YVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDSYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHP TPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPPTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPP 240
           SYPPNNGAYQTSMY+SPF SGYPPSSYPPPSSAYP APYP HPQASPFYPPGPYPGVYPP
Sbjct: 181 SYPPNNGAYQTSMYSSPFPSGYPPSSYPPPSSAYPPAPYPLHPQASPFYPPGPYPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

[Close]

BLAST of Carg26850 vs. ExPASy TrEMBL
Match: A0A1S4E0J9 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495260 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 207/247 (83.81%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS YSIQGQPLEV VIGCTKLKDTEWISRQDPYVCLEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATM--PSAHPTAYPHPH-TPYA-FS 180
           VRLILHFA A+R  ++FAPSAPPFHAP P Q+  YATM  P AHPTAYP P+ TPYA F 
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYATMPPPPAHPTAYPPPNATPYASFQ 180

Query: 181 SPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPG 240
           SP+PSYPP++G YQTSMY+SP+  GYPP+SYPPP SAYP  PYPP PQASPFYPPGPYPG
Sbjct: 181 SPYPSYPPSSGTYQTSMYSSPYPPGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYPG 240

Query: 241 VYPPPQY 244
           VYPPPQY
Sbjct: 241 VYPPPQY 247

[Close]

BLAST of Carg26850 vs. ExPASy TrEMBL
Match: A0A5D3C5U4 (Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00770 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 207/247 (83.81%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS YSIQGQPLEV VIGCTKLKDTEWISRQDPYVCLEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATM--PSAHPTAYPHPH-TPYA-FS 180
           VRLILHFA A+R  ++FAPSAPPFHAP P Q+  YATM  P AHPTAYP P+ TPYA F 
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYATMPPPPAHPTAYPPPNATPYASFQ 180

Query: 181 SPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPG 240
           SP+PSYPP++G YQTSMY+SP+  GYPP+SYPPP SAYP  PYPP PQASPFYPPGPYPG
Sbjct: 181 SPYPSYPPSSGTYQTSMYSSPYPPGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYPG 240

Query: 241 VYPPPQY 244
           VYPPPQY
Sbjct: 241 VYPPPQY 247

[Close]

BLAST of Carg26850 vs. ExPASy TrEMBL
Match: A0A0A0K6H5 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 204/248 (82.26%), Postives = 218/248 (87.90%), Query Frame = 0


Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS ++IQGQPLEV VIGCTKLKDTEWISRQDPYV LEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMP---SAHPTAYPHP-HTPYA-F 180
           VRLILHFA A+R  ++FAPSAPPFH P P Q+  Y TMP    AHPTAYP P  TPYA F
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHVPTPPQVPAYITMPPPSPAHPTAYPPPTPTPYASF 180

Query: 181 SSPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYP 240
            SP+PSYPP++G YQTSMY+SP+ SGYPP+SYPPP SAYP  PYPP PQASPFYPPGPYP
Sbjct: 181 QSPYPSYPPSSGTYQTSMYSSPYPSGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYP 240

Query: 241 GVYPPPQY 244
           GVYPPPQY
Sbjct: 241 GVYPPPQY 248

[Close]

BLAST of Carg26850 vs. TAIR 10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-65
Identity = 142/249 (57.03%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           IQGQ LEV V+GC KLKDTEW SRQDPYV LEYG  + RT TC DGG+N +FQEKF+F+L
Sbjct: 7   IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
           IEG+R++ V VWNSNT++ DDFIGN  IQL KVL++ YDD TW+LQ+KTGR AGEV+L+L
Sbjct: 67  IEGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLL 126

Query: 126 HFATADRLPANFAPSAP-----PFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 185
           H+A A +     APSAP     P ++ PPS        P + P+ YP          P P
Sbjct: 127 HYAGAKKHNYGSAPSAPYAPHVPQYSAPPSASPYSTAPPYSGPSLYPQVQ-----QYPQP 186

Query: 186 S-YPPNNG-AYQTSMYASPFLSGYP--PSSY--PPPSSAYPHAPYPPHPQASPFYPPGPY 244
           S YPP +G   Q S Y  P  SGYP  PS+Y  PPPSSAYP  PYPP P    +YP GPY
Sbjct: 187 SGYPPASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPS---YYPQGPY 246

[Close]

BLAST of Carg26850 vs. TAIR 10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 33/121 (27.27%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 11  LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIR 70
           LEV+++    L+D ++++  DPYV L   + + ++      G  P + E F+F++ EG  
Sbjct: 6   LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTT 65

Query: 71  EINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATA 130
           E+   +++ +  T DD +G   I L  V  EG    T     K   + GE+ + L F  +
Sbjct: 66  ELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 125

Query: 131 D 132
           +
Sbjct: 126 E 126

The following BLAST results are available for this feature:

BLAST of Carg26850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022469.1	2.6e-137	100.00	Elicitor-responsive protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927815.1	1.6e-134	98.77	elicitor-responsive protein 3-like isoform X2 [Cucurbita moschata]	[more]
XP_023531347.1	2.7e-134	98.35	elicitor-responsive protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6588683.1	1.8e-133	100.00	Elicitor-responsive protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022988903.1	4.0e-130	96.71	elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1...	[more]

BLAST of Carg26850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q25AG5	6.1e-12	29.37	Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=...	[more]
Q0JBH9	6.1e-12	29.37	Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 P...	[more]
Q9C8S6	1.5e-10	27.27	16 kDa phloem protein 2 OS=Arabidopsis thaliana OX=3702 GN=PP16-2 PE=1 SV=1	[more]

BLAST of Carg26850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPZ8	7.7e-135	98.77	elicitor-responsive protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JNP1	2.0e-130	96.71	elicitor-responsive protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S4E0J9	1.7e-110	83.81	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A5D3C5U4	1.7e-110	83.81	Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K6H5	1.6e-108	82.26	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=...	[more]

BLAST of Carg26850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34150.1	2.8e-65	57.03	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G63220.1	1.1e-11	27.27	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 10..107 e-value: 1.4E-12 score: 57.8
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 11..108 e-value: 2.9E-14 score: 53.2
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..109 score: 15.044899
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 9..129 e-value: 1.9E-23 score: 85.2
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 8..128
None	No IPR available	PANTHER	PTHR47052	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)	coord: 5..243
None	No IPR available	CDD	cd00030	C2	coord: 11..108 e-value: 3.99604E-20 score: 80.1887

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26850-RA	Carg26850-RA	mRNA