
Carg26792 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGCCCGCTCATCCTCTCCCACTGTTTCACGGATTCCTTGCTCTCTCCCCCCACTGATTCTTCCCTTTTACTTCCATTGCAGTCCCCCCTCTCGTGCTCGCTACAATGTTCTCTCTTTCGCGTTCAATTTCTCAATCCGCCACCAATTTCCTCTCTCTTTCGACCCCTGCAATTCCCTCTAAACCCACCTCTCTTTTGTCCCATTTCTCCACTTTCTCACTACAATCGTCTCCTTCCCTCTCCGTTTCTCTCCCTTGCCGCCGTTCCCAGTTCGGTTCTTCAGTAATGTCGTCCAATTCCCAGTTCTCTAACATTGTGGACACTTCCATTGACATGGGTTTTGATGATCATGACCTCGATCGATTTGCCGAAGTTGCGAACAGGGTCGCGGATGCTGCTGGGGAAGTGATTCTGAAGTACTTTCGCAAGAAATTTGAGATCATTGATAAGGCGGATTTCAGTATGTTTTTGTTTATGTTGGAGGGTTTTTTATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGTAATGGGCTGGTAGTGTTAATGGGTAATGAAGTGTTTGATAAAATGCCGAGGTGAAATTTGTTAACAGATGATAAGATTAAGAGAGAAGGTTGTTGATTAGGAGGTGAAAATGCTGGGAGTTTCGAAGATGGTTCAATTGCTTGCGGGAGAAAAACGAAGTGATGAGTTTTTGAATGTGTTTATTTCTGCATGCAAATAGATGTCAATGAAAATAAGAGAAAAAGGGATGGTACTTGATTTTTTTTTTCTTCAATTTTTCTATCTCTAGTCATTGATTCTTCTTTTAGATTGGTATAATTCTATGAAGAAAAAAGAGAAACGAGAAGATAAGACATTTCTTCCCATACCATTTTCAAAGAAGATTATGAAAAGCCTCCCTAATTGGTAAAGTGTAGGTTGCTAGGCATATTTTTTGCCCGGAAATTCAATATCAAGACATTCTTATGTACAACAAAATCAGGCATTTGCTTATATACTTTTTCACTTTTCATGGTTCACAACTAGTTAGAAGGCCTTTTTCCGAAGTGCTGTGTTCCTAATAACAAGGGTCTGGTTTTGGGGCTACTTCCTGAATCAATGCAGGTCCTGTGACTGTGGCTGATCAAGCAGCGGAGGAATCTATGGTTTCAGTTTTAATGGAGAACTTTCCTTCTCATGCTATGTTAGTTTTTTCCAACTTTTCTCGTTGGCTCTCAAAAACGATTGCCAAATCTTGCACGAGGCTAATATCTAACTAAAATTTCAATCCCTTGTGAAACTCTTATGTTTAACTCTAGTTGCTACCTAAAAAACGATGATGTCGATCTATGATGTGTCATTTCCTTATATAGATATGTTGTGACTGCAGATATGGTGAGGAAAAAGGATGGAGATGCAAAGAGAATTCAGCTGATTTTGTTTGGGTTTTAGATCCAATAGATGGCACAAAGAGTTTTATTACTGGTACTTTCCGGGTGTTCCTTCTTCCTTATCTGATTTAGTTGTTTATTGATCATCAGATGTTTCAGGAAAACCCCTATTTGGCACTCTGATTGCATTGTTACATAGAGGGAAACCAGTAAGGACAATCAACCATACTCTTCCTCTCTTATTGCATCATTATATTTCCTCCTTTTTTAAGTGTGTAGTTTGTTCTATTGTTCAAAAAAGCCCCGACATTGGTTTCAAATCCAAATAATTTTGAATCAAATAGAAAGGAGACATAGTGATGCTGTTGTGAAGTTATAAATGGAAAAGTGGAGATGAAAATATCTAAAAATGTGTCCCCGATGTTCTACCTTTATCTGCTATATTAATGATAGGATGGTGTTAATCTTCAGATTCTGGGTATCATTGATCAGCCTGTTCTGAGAGAAAGATGGATAGGAATAAGTGGGAGGAGAACTGCATTGAATGGGCAAAATGTATCTACAAGATCTTGTTCAGACATATCACAGGCCTATTTGTATGTTTTCCCTTTTATGGTGTTTTCTTCTCTTAGTTTCAAAGTTCAGGTTATTGCTATATTCGCATTATTTGTATGTTCCTTTTTCTTTTTGGGATCTGTGCAGATATTGGAGGCAGAGTAGAGAATCCTTTCGTTCTTTTTAAATAGTTTAGAATAAGACTTGAATGGGTAAAGACTAAATTGTCCAAAATTGAAATTAAATCTAGGAGTTCATGGAATAAGAAAAGATAGGTAAAGCTTGGGAACCAAAATCTAGGCTCCAAAAGTTGATGGGTTTACTTTTTACCTTCTATTCTCGGGTGTACGTGTTAAAAGCTTTTTCGCCCTTCTTTGTTTGGGTTCGTTTGGTTGTTTCTTATGAACCCTCTTGTCTGTGTAGATATACTACAAGCCCTCATCTATTTAGTGAAGAAGCCGATGAGGCATTTGCTCGTGTGAGGAACAAGGTATGCATGATAACGAAAATACTTGAATATTCTCAATATTTTTCATGGTGTTTGATGCCAAGATAGAATGTCTTTTCTCATTTTCTGATAAAAACATCGGAAGTTCACTTGATGTTTTATTTGGTGCACATGATTGGAAAGAACCACAGATTTTGGAATTGATAGAAATTTTTACCACCTCCAAGGGAGTGGAATGCAGTTTATGTGTGAGATCCCACATCGATTGGAGAGGGGAACAAAACATTCCTTATAAGGGTTTCCGTGTTTTAAAACTTGAAGGGAAAGTCCAAAGAGGACAATATTTGTTCTTGGTTTTGTGGGAATGTAGCAACAGTGCACTTGGATTAGATGCAATGCGAAGTGCAATTTGATTACACACCATGAGTTTGCTAGTGTAATACTAAAGCTTATCTCAGTTAATAGTTGATATAGATCTATATTTTGACTCAACACTTGATCATGAAACCACATTGCTTCTTACTCTGGGATTGAGAAGCAAACGTACCAAATGGACAATTTTCTATACGACAAATCCTACTAAATGCTTCTCCCAAAGTGGGAATTTCAGAGCTAGATAGAATCTGTGTATTAGTCATCCCAAATTCCAATGAAAGACCATTCAAAAAACTTAATATATGTAGTAAATGATTGTAGTTCAACATACTTTGTCTTGAAGTGCATGAAGTAACTCATAACAGTTTGCTCTTTCAGCTCTGCTCGAAAGAATGTCGTGAGTATTAACCTATTCTTTACTTGAGCACAAAAATTCTAAGTGCTTCAAATGATGGCAAAACCTTCTGTTTGGCAAAGACTTCCCTTTCCCTTGATCTGGCGAATAATGCTCACTAAGTTCCTTTTTGGTTATTTGCCCACTCCAAAATAGCATCCAATAGAAAAGTCTGGAAGTTGGATAAATCAATTTCGGAATGCATACTATGTTGTTAGAAGACAACTCACCGATCACCCTCAGCCGGGTCGGTCTTGGTAGCTCGGAAGAAATGAGAATATGCACAAGATTGTTTGGACAGCGTATCTCCCTGACTTAATTTACCCACTCCGATGCTGTATACCAGATGAAGAAAGTTATTAGAATGGACTCTGAGCAGTTTTCACTTTATTCTTTATTGATATATATCTTTTTGTTTTTCCTCTAGCCCATCAATATAAAAGAGATCTTGAGCAGGTTCGATCTTATATTCACAATCGACATTGTTGTGCAGGTAAAAGTTCCCCTGTATGGTTGTGACTGCTATGCGTATGCCCTTTTAGCATCTGGGTTTGTAGATCTTGTCATTGAATCTGGGCTCAAGGTAATTAGTTAGGCTGCCATATGCATAGCTTGCTCATACTCGATCATCGTTTTTTCACGTGGCCAATAGTTGAGAAAAATCAAAGTCCATGTGGAACACTCTTACAATTCGAGCTCATGCACTATTTATATGGCCAGTTTATGCATTGAATTGCCTAGTATATGAAAATCTAATCAAGATAGCTTTTAATTCTTTCAGCCCTATGATTTTCTCTCTCTAATACCCATAATCAAAGGGGCTGGTGGTGTGATAACCGATTGGAAAGGAGAGGAGCTTTATTGGGAAGCTTTGCCTAATTCCCCTGCAACAAGTAATGTACACTTTCATGTAAACTTTGTAAAGTGTGCTCGTTTTACATAAAACTAAACTGTTCTTTACTTCAGGTTTTAATGTGTTAGCAGCTGGGGATAAAGTTATCCATCAACAAGCCCTTGAATCATTAAGATGGGACTGATAATTCTAGACACTCACAAGAGAGAATGGTTTGTGACTGCAACTTTTGGCCTCTTGGACTGAGTAACACAGAATAAATAAGCAAATGCAAAGCATATCTAGTCTAGGTTCATTTTTTAGAAGAAACAGATCCTTCACTCTTCCCTCACTGTTCATGTTAACGTAGGGGTCTCATGTTAAGGGAGGGGCAATAGCTCTCTTATGACGGAGTTTAGTGCTTTTGACATAGCCATTATATGTTAATCAGTGATTAAAATTGCCCGCCAATCGTAGATCTTATGGCTTATGGTTTCTTTGCATTACCTTAATAGGTTAAGAATATATTATTCATGAGATCATTTCTTGAATACTGTCTATGAATGTATAATCTTCATTGTGTGTACCTTGAGAAATTTCCAGGGGCATCTTT AGCGCCCGCTCATCCTCTCCCACTGTTTCACGGATTCCTTGCTCTCTCCCCCCACTGATTCTTCCCTTTTACTTCCATTGCAGTCCCCCCTCTCGTGCTCGCTACAATGTTCTCTCTTTCGCGTTCAATTTCTCAATCCGCCACCAATTTCCTCTCTCTTTCGACCCCTGCAATTCCCTCTAAACCCACCTCTCTTTTGTCCCATTTCTCCACTTTCTCACTACAATCGTCTCCTTCCCTCTCCGTTTCTCTCCCTTGCCGCCGTTCCCAGTTCGGTTCTTCAGTAATGTCGTCCAATTCCCAGTTCTCTAACATTGTGGACACTTCCATTGACATGGGTTTTGATGATCATGACCTCGATCGATTTGCCGAAGTTGCGAACAGGGTCGCGGATGCTGCTGGGGAAGTGATTCTGAAGTACTTTCGCAAGAAATTTGAGATCATTGATAAGGCGGATTTCAGTCCTGTGACTGTGGCTGATCAAGCAGCGGAGGAATCTATGGTTTCAGTTTTAATGGAGAACTTTCCTTCTCATGCTATATATGGTGAGGAAAAAGGATGGAGATGCAAAGAGAATTCAGCTGATTTTGTTTGGGTTTTAGATCCAATAGATGGCACAAAGAGTTTTATTACTGATGTTTCAGGAAAACCCCTATTTGGCACTCTGATTGCATTGTTACATAGAGGGAAACCAATTCTGGGTATCATTGATCAGCCTGTTCTGAGAGAAAGATGGATAGGAATAAGTGGGAGGAGAACTGCATTGAATGGGCAAAATGTATCTACAAGATCTTGTTCAGACATATCACAGGCCTATTTATATACTACAAGCCCTCATCTATTTAGTGAAGAAGCCGATGAGGCATTTGCTCGTGTGAGGAACAAGGTAAAAGTTCCCCTGTATGGTTGTGACTGCTATGCGTATGCCCTTTTAGCATCTGGGTTTGTAGATCTTGTCATTGAATCTGGGCTCAAGCCCTATGATTTTCTCTCTCTAATACCCATAATCAAAGGGGCTGGTGGTGTGATAACCGATTGGAAAGGAGAGGAGCTTTATTGGGAAGCTTTGCCTAATTCCCCTGCAACAAGTTTTAATGTGTTAGCAGCTGGGGATAAAGTTATCCATCAACAAGCCCTTGAATCATTAAGATGGGACTGATAATTCTAGACACTCACAAGAGAGAATGGTTTGTGACTGCAACTTTTGGCCTCTTGGACTGAGTAACACAGAATAAATAAGCAAATGCAAAGCATATCTAGTCTAGGTTCATTTTTTAGAAGAAACAGATCCTTCACTCTTCCCTCACTGTTCATGTTAACGTAGGGGTCTCATGTTAAGGGAGGGGCAATAGCTCTCTTATGACGGAGTTTAGTGCTTTTGACATAGCCATTATATGTTAATCAGTGATTAAAATTGCCCGCCAATCGTAGATCTTATGGCTTATGGTTTCTTTGCATTACCTTAATAGGTTAAGAATATATTATTCATGAGATCATTTCTTGAATACTGTCTATGAATGTATAATCTTCATTGTGTGTACCTTGAGAAATTTCCAGGGGCATCTTT ATGTTCTCTCTTTCGCGTTCAATTTCTCAATCCGCCACCAATTTCCTCTCTCTTTCGACCCCTGCAATTCCCTCTAAACCCACCTCTCTTTTGTCCCATTTCTCCACTTTCTCACTACAATCGTCTCCTTCCCTCTCCGTTTCTCTCCCTTGCCGCCGTTCCCAGTTCGGTTCTTCAGTAATGTCGTCCAATTCCCAGTTCTCTAACATTGTGGACACTTCCATTGACATGGGTTTTGATGATCATGACCTCGATCGATTTGCCGAAGTTGCGAACAGGGTCGCGGATGCTGCTGGGGAAGTGATTCTGAAGTACTTTCGCAAGAAATTTGAGATCATTGATAAGGCGGATTTCAGTCCTGTGACTGTGGCTGATCAAGCAGCGGAGGAATCTATGGTTTCAGTTTTAATGGAGAACTTTCCTTCTCATGCTATATATGGTGAGGAAAAAGGATGGAGATGCAAAGAGAATTCAGCTGATTTTGTTTGGGTTTTAGATCCAATAGATGGCACAAAGAGTTTTATTACTGATGTTTCAGGAAAACCCCTATTTGGCACTCTGATTGCATTGTTACATAGAGGGAAACCAATTCTGGGTATCATTGATCAGCCTGTTCTGAGAGAAAGATGGATAGGAATAAGTGGGAGGAGAACTGCATTGAATGGGCAAAATGTATCTACAAGATCTTGTTCAGACATATCACAGGCCTATTTATATACTACAAGCCCTCATCTATTTAGTGAAGAAGCCGATGAGGCATTTGCTCGTGTGAGGAACAAGGTAAAAGTTCCCCTGTATGGTTGTGACTGCTATGCGTATGCCCTTTTAGCATCTGGGTTTGTAGATCTTGTCATTGAATCTGGGCTCAAGCCCTATGATTTTCTCTCTCTAATACCCATAATCAAAGGGGCTGGTGGTGTGATAACCGATTGGAAAGGAGAGGAGCTTTATTGGGAAGCTTTGCCTAATTCCCCTGCAACAAGTTTTAATGTGTTAGCAGCTGGGGATAAAGTTATCCATCAACAAGCCCTTGAATCATTAAGATGGGACTGA MFSLSRSISQSATNFLSLSTPAIPSKPTSLLSHFSTFSLQSSPSLSVSLPCRRSQFGSSVMSSNSQFSNIVDTSIDMGFDDHDLDRFAEVANRVADAAGEVILKYFRKKFEIIDKADFSPVTVADQAAEESMVSVLMENFPSHAIYGEEKGWRCKENSADFVWVLDPIDGTKSFITDVSGKPLFGTLIALLHRGKPILGIIDQPVLRERWIGISGRRTALNGQNVSTRSCSDISQAYLYTTSPHLFSEEADEAFARVRNKVKVPLYGCDCYAYALLASGFVDLVIESGLKPYDFLSLIPIIKGAGGVITDWKGEELYWEALPNSPATSFNVLAAGDKVIHQQALESLRWD Homology
BLAST of Carg26792 vs. NCBI nr
Match: KAG7010909.1 (Bifunctional phosphatase IMPL2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 696.4 bits (1796), Expect = 1.2e-196 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
BLAST of Carg26792 vs. NCBI nr
Match: XP_022944579.1 (bifunctional phosphatase IMPL2, chloroplastic [Cucurbita moschata] >KAG6571092.1 Bifunctional phosphatase IMPL2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 677.6 bits (1747), Expect = 5.9e-191 Identity = 344/350 (98.29%), Postives = 344/350 (98.29%), Query Frame = 0
BLAST of Carg26792 vs. NCBI nr
Match: XP_022986560.1 (bifunctional phosphatase IMPL2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187 Identity = 338/350 (96.57%), Postives = 341/350 (97.43%), Query Frame = 0
BLAST of Carg26792 vs. NCBI nr
Match: XP_023512300.1 (bifunctional phosphatase IMPL2, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 664.5 bits (1713), Expect = 5.2e-187 Identity = 338/350 (96.57%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of Carg26792 vs. NCBI nr
Match: XP_038900317.1 (bifunctional phosphatase IMPL2, chloroplastic [Benincasa hispida]) HSP 1 Score: 607.4 bits (1565), Expect = 7.5e-170 Identity = 311/349 (89.11%), Postives = 323/349 (92.55%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy Swiss-Prot
Match: Q6NPM8 (Bifunctional phosphatase IMPL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN7 PE=1 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.6e-125 Identity = 224/332 (67.47%), Postives = 271/332 (81.63%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy Swiss-Prot
Match: P56160 (Histidinol-phosphatase OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=hisN PE=3 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 3.9e-28 Identity = 73/229 (31.88%), Postives = 123/229 (53.71%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy Swiss-Prot
Match: Q9CNV8 (Nus factor SuhB OS=Pasteurella multocida (strain Pm70) OX=272843 GN=suhB PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 8.4e-23 Identity = 70/258 (27.13%), Postives = 126/258 (48.84%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy Swiss-Prot
Match: Q9HXI4 (Nus factor SuhB OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=suhB PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.5e-22 Identity = 72/239 (30.13%), Postives = 119/239 (49.79%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy Swiss-Prot
Match: Q8NS80 (Histidinol-phosphatase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=hisN PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.1e-22 Identity = 75/232 (32.33%), Postives = 115/232 (49.57%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy TrEMBL
Match: A0A6J1FWY7 (Histidinol-phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111448992 PE=3 SV=1) HSP 1 Score: 677.6 bits (1747), Expect = 2.9e-191 Identity = 344/350 (98.29%), Postives = 344/350 (98.29%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy TrEMBL
Match: A0A6J1JEE0 (Histidinol-phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111484263 PE=3 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 6.6e-188 Identity = 338/350 (96.57%), Postives = 341/350 (97.43%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy TrEMBL
Match: A0A0A0LM14 (Histidinol-phosphatase OS=Cucumis sativus OX=3659 GN=Csa_2G249820 PE=3 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.5e-163 Identity = 297/349 (85.10%), Postives = 317/349 (90.83%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy TrEMBL
Match: A0A6J1CX82 (Histidinol-phosphatase OS=Momordica charantia OX=3673 GN=LOC111015418 PE=3 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 1.4e-161 Identity = 291/349 (83.38%), Postives = 316/349 (90.54%), Query Frame = 0
BLAST of Carg26792 vs. ExPASy TrEMBL
Match: A0A1S3CD59 (Histidinol-phosphatase OS=Cucumis melo OX=3656 GN=LOC103499699 PE=3 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 4.0e-161 Identity = 294/349 (84.24%), Postives = 314/349 (89.97%), Query Frame = 0
BLAST of Carg26792 vs. TAIR 10
Match: AT4G39120.1 (myo-inositol monophosphatase like 2 ) HSP 1 Score: 448.4 bits (1152), Expect = 5.4e-126 Identity = 228/354 (64.41%), Postives = 280/354 (79.10%), Query Frame = 0
BLAST of Carg26792 vs. TAIR 10
Match: AT3G02870.1 (Inositol monophosphatase family protein ) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-22 Identity = 73/245 (29.80%), Postives = 121/245 (49.39%), Query Frame = 0
BLAST of Carg26792 vs. TAIR 10
Match: AT3G02870.3 (Inositol monophosphatase family protein ) HSP 1 Score: 102.4 bits (254), Expect = 7.3e-22 Identity = 72/242 (29.75%), Postives = 119/242 (49.17%), Query Frame = 0
BLAST of Carg26792 vs. TAIR 10
Match: AT3G02870.2 (Inositol monophosphatase family protein ) HSP 1 Score: 101.3 bits (251), Expect = 1.6e-21 Identity = 73/245 (29.80%), Postives = 121/245 (49.39%), Query Frame = 0
BLAST of Carg26792 vs. TAIR 10
Match: AT1G31190.1 (myo-inositol monophosphatase like 1 ) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-18 Identity = 66/239 (27.62%), Postives = 107/239 (44.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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