Carg26779 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCCACATTCACCCCCTCCTTTTGCTTCAGATCTTTCACTGTGGCCGCATCGAACAAGGCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGGCGGCTTTCAAGCCACTCAAGCTTCCTCTCTTTTGGCCATGGCAGAAGGTCTGTATTCATTATCCAAATTGAATGGAAACAAACTATCCTGCCTTCAATGGCGTTCCTGTTTGATCACAGGTGAAGATGGGCCCTCTCAGTGTATCTCCAATGGGATTTGGAACCTGGGCGTGGGGGAACCAGCTGTTGTGGGGCTACCAGGAATCCATGGACGCTGAGCTTCAACAGATTTTCAATTTGGCTGTGGAGAACGGAATCAATCTCTTCGATACGGCGGATTCCTATGGTACTGGAAGATTAAATGGCCAAAGCGAAAAGCTACTTGGAAAATTCATCCGAGAATCTCAAGGTCCTGTTTGCTCTCTTATTCGTATTAACATTTATTTTCTGGCTTGTTGATGAAATTGAACGCGCGCAAGGAATTAAGTTTGCCCTAACCCTAATTCTCCAGAGAAAAATGACATTGTGATAGCCACCAAGTTTGCTGCGTATCCATGGCGCCTAACACCGGGCCAGTTTGTCAAAGCGTGCAAGTATGCTTTAGATCAAACTCCACTCAAATTTTATCAATATTTTCTCCTTAGCTTGTAAATTTACTACCACACATGTTGGATGACAATGAGCTTTATTTAGGGCGTCTTTGGATCGGATGCAGATTGAGAAAATTGGTATAGGACAATTACATTGGTCAACAGCGAACTATGCTCCTTTGCAGGAGATGGCTCTTTGGGATGGACTAGTGGCAATGTATGATCAGGTTACTATAATTTCTGCTCAAATGGGTTCAACTTTCTCATCATTAAACTTGAATTCAGAGTATCTGAAACCATACGTTTCATTTTGATGCTGTACTCATAAAGTTGGGGAATTACAGGGCTTGGTTCAAGCAGTTGGAGTGAGCAACTATGGACCAAAGCAACTGGTGAAGATACATGACTACCTAAAAGATCGAGGAGTTCCCTTGTGCTCTGCTCAGGTATTTGGTATGAACAAGCTTACCAACCACCATGTACTTGACCAATGGTTTAAGGCTAAACATCTTATGAGGATACGAATTCGTGTGAGATCTCATATCGGTTAGAGTGGGAAACGAAACATTCCTTATAAGGGTGTGGAAATCTTTCTCTAGTAGATGTATTTTAAAACCGTGAGGTTGATGACCATACGTAACAGGCTAAAACGGACAATATCTACTAGCGGTGGGCTTGGGCTATTAGAAATGATATCAGAGTCAGATACCAAACGTTGGCCTCCAAGGGGGGATGATTGTGAGATCCCATATTAGTTGGAGTGGGAAACGAAGCATTCTTATAAGAATGTGGAAACCTCTCCCCAGTAGATGCGTTTTAAAATCGTGAGGCTGATAGCAATACATAACGAACCAAAGCAGACAATATCTGCTAGCAGTGGACTTGGGCTATTACACAAGGAAATCGTCTAAGATTTTAATATTCTAGGGAGGGCGGTAACCGTCTAAGCCGACTGCTAGCAAATATTGTCTTCTTTGGACTTTCTCTTTCGGCTTCTCCTCAAAGTTTTTAAAATGCGTATGCTAGGGAGAGGTTTTCACATCCTTATAAAAAATAATTCGTTCTCCTCTCCAACCGAGGTAGGATCTGACAGATACCCACCATAGGATTTCAATTCATTTCTTCAAAGTCCATTCACTTTTGTCACCAACTGAGCCAGCGTATGATGGGTATGCTCTTATAGGAAACCTTGTTACTCTGCTCTTATTTTCTGCCACAAAGTTCTTGTTCCAAGAATGATGACTGTTAAATGACTGCATAGGAAACCTTGAATGGCAGTTGGACTTTGTGAATGCTAACTCTTTCATTTTAGGTGCAATTTTCTTTACTAAGCCTAGGAGACGAACAGTTGGAGACTAAGAAGATATGTGATTCTTTGGGCATCCGCTTAATCGCTTACAGTCCTTTGGGGTTGGGAATGCTTACAGGAAAATACTCACCCTCCAAGCTTCCATCTGGACCTCGGTAAAATCAATGGATTCTTTTACATTTCTCTTTGAATTTCATGCTATTTACACATTGGCGTTCCCAGAGGTCTTCTGTTCAGGCAAATTCTACCAGGATTGGAACCTTTACTGAGTACACTAGGGAACATTGCAGAGAAAAGGCGCAAGACAATACCACAGGTAATTAATTTCAATGGAATTGTCTGTGATGTGATTTGCATTTCTTTAGATACTGTGGTTTTGACAAACAAATGCACATGATCTGAGCTGGTAACAGGTTGCTATAAACTGGTGCATATCCAAGGGAACTATACCCATACCTGGAGCTAAGACATTAAAACAAGCTCAAGAAAATCTGGGGGCTCTTGGCTGGCGCCTTACGCAAGAGGAATCAAACCTGTTGGAGGATGGAGCTCGAGCGTCCACCGGGAGGATGATACAGAATGTTTTCCAGACCAGGTGGTTTGAAGTTTTAACTTCAATATCAACCTTTTTTAAAAGTCATTCTATAACCATTCAAATCCACTGCCCAGTAAATATTGTCCCCTTTGGCCCATTATATATCACCATCAGCTTCACGGTTTTTAAACGTGTCTACTAGAGAGAGGTTTTCATATCCTTATAAGAAATGTTTTGTTCCCCTCTCCAACCGGTGTGGGATCTCACAATCCACCCCGTTGGGGTCTAGCGTTCTCGCTGGCACACCACTCAACGCGCTTTGATACCATTTGGTAGATATTGTCCGCTTTGGCCCGTTACGTATCGCAGTCAGTCTCAGTTTTAAAACACGCCTATTTGGGAGAGGTTTCCACACTTTTATAAGGAATATTTCGTTACCCTCTCCAACCAATGTGAGATCTTACATAAATCTTTCCCTAGTTAGACGCATTCTAAAACCGTGAGTCTGACAGCGATACGTAACAAGCCAAAACGGACATCATCTACTAGCGGTAGGCTTGAGTTGTTACCGTGGAAACATGCTTTCTTTCAATGTTAACCCCTTCATTGAAAACCAGGTGAACTTGGCAGCACCAGGTGGGATAGTGACGAGAGAATGAAGAACTCAGGCAAAAAGAAGGGCATACCCTCCTTATCCAACCGGATTTTGGTACCGCCAATGCCCACAAAGCTGGAGAAAAAGAGGAAAAGGCACAGCAAAGCAAAGACATTGGCATAGGGTACTTATTGCCTTATTCTATTCTAATTCAGCTTGTCATTCACTCAGTTTTAGCCCTAATGCTTCCATTTTTATCGATTTATAACCTCGATCAAGTTTTTGTTTCAATCACCATTAGAAAGGTTTCCAACGCATGCCCAAAACCGAGTTCTTCTCATTTGCCATTTTTAAATAATAGCACATGTAGGGCTTAGGATCATCCTCGTTGAAATTAATGTTTTCTCTTTTCGACCTCGGTGTCGTTACATCCTTTGTATTCGCGAACATCGCCTTATCCATCACTTTCTCTCCGCTTTCAACCACATTTTAATCGTGTTTGAACTCCTCATCACAAAAATCATGTCGACAACATCATTCTCTGGATCTTTCACATAAAAGATTATTTCCGTGTAGATCTTACTTTTTTCAATAAATCGAGAATTGATTCTTTTTTTCCATTTAACCTAAGTTGAGAATAAAAATGATTTTTTTTCCTATTTTCT ATGGCTTCCTCCACATTCACCCCCTCCTTTTGCTTCAGATCTTTCACTGTGGCCGCATCGAACAAGGCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGGCGGCTTTCAAGCCACTCAAGCTTCCTCTCTTTTGGCCATGGCAGAAGGTGAAGATGGGCCCTCTCAGTGTATCTCCAATGGGATTTGGAACCTGGGCGTGGGGGAACCAGCTGTTGTGGGGCTACCAGGAATCCATGGACGCTGAGCTTCAACAGATTTTCAATTTGGCTGTGGAGAACGGAATCAATCTCTTCGATACGGCGGATTCCTATGGTACTGGAAGATTAAATGGCCAAAGCGAAAAGCTACTTGGAAAATTCATCCGAGAATCTCAAGAGAAAAATGACATTGTGATAGCCACCAAGTTTGCTGCGTATCCATGGCGCCTAACACCGGGCCAGTTTGTCAAAGCGTGCAAGGCGTCTTTGGATCGGATGCAGATTGAGAAAATTGGTATAGGACAATTACATTGGTCAACAGCGAACTATGCTCCTTTGCAGGAGATGGCTCTTTGGGATGGACTAGTGGCAATGTATGATCAGGGCTTGGTTCAAGCAGTTGGAGTGAGCAACTATGGACCAAAGCAACTGGTGCAATTTTCTTTACTAAGCCTAGGAGACGAACAGTTGGAGACTAAGAAGATATGTGATTCTTTGGGCATCCGCTTAATCGCTTACAGTCCTTTGGGGTTGGGAATGCTTACAGGAAAATACTCACCCTCCAAGCTTCCATCTGGACCTCGGTAAAATCAATGGATTCTTTTACATTTCTCTTTGAATTTCATGCTATTTACACATTGGCGTTCCCAGAGGTCTTCTGTTCAGGCAAATTCTACCAGGATTGGAACCTTTACTGAGTACACTAGGGAACATTGCAGAGAAAAGGCGCAAGACAATACCACAGGTTGCTATAAACTGGTGCATATCCAAGGGAACTATACCCATACCTGGAGCTAAGACATTAAAACAAGCTCAAGAAAATCTGGGGGCTCTTGGCTGGCGCCTTACGCAAGAGGAATCAAACCTGTTGGAGGATGGAGCTCGAGCGTCCACCGGGAGGATGATACAGAATGTTTTCCAGACCAGGTGAACTTGGCAGCACCAGGTGGGATAGTGACGAGAGAATGAAGAACTCAGGCAAAAAGAAGGGCATACCCTCCTTATCCAACCGGATTTTGGTACCGCCAATGCCCACAAAGCTGGAGAAAAAGAGGAAAAGGCACAGCAAAGCAAAGACATTGGCATAGGGTACTTATTGCCTTATTCTATTCTAATTCAGCTTGTCATTCACTCAGTTTTAGCCCTAATGCTTCCATTTTTATCGATTTATAACCTCGATCAAGTTTTTGTTTCAATCACCATTAGAAAGGTTTCCAACGCATGCCCAAAACCGAGTTCTTCTCATTTGCCATTTTTAAATAATAGCACATGTAGGGCTTAGGATCATCCTCGTTGAAATTAATGTTTTCTCTTTTCGACCTCGGTGTCGTTACATCCTTTGTATTCGCGAACATCGCCTTATCCATCACTTTCTCTCCGCTTTCAACCACATTTTAATCGTGTTTGAACTCCTCATCACAAAAATCATGTCGACAACATCATTCTCTGGATCTTTCACATAAAAGATTATTTCCGTGTAGATCTTACTTTTTTCAATAAATCGAGAATTGATTCTTTTTTTCCATTTAACCTAAGTTGAGAATAAAAATGATTTTTTTTCCTATTTTCT ATGGCTTCCTCCACATTCACCCCCTCCTTTTGCTTCAGATCTTTCACTGTGGCCGCATCGAACAAGGCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGGCGGCTTTCAAGCCACTCAAGCTTCCTCTCTTTTGGCCATGGCAGAAGGTGAAGATGGGCCCTCTCAGTGTATCTCCAATGGGATTTGGAACCTGGGCGTGGGGGAACCAGCTGTTGTGGGGCTACCAGGAATCCATGGACGCTGAGCTTCAACAGATTTTCAATTTGGCTGTGGAGAACGGAATCAATCTCTTCGATACGGCGGATTCCTATGGTACTGGAAGATTAAATGGCCAAAGCGAAAAGCTACTTGGAAAATTCATCCGAGAATCTCAAGAGAAAAATGACATTGTGATAGCCACCAAGTTTGCTGCGTATCCATGGCGCCTAACACCGGGCCAGTTTGTCAAAGCGTGCAAGGCGTCTTTGGATCGGATGCAGATTGAGAAAATTGGTATAGGACAATTACATTGGTCAACAGCGAACTATGCTCCTTTGCAGGAGATGGCTCTTTGGGATGGACTAGTGGCAATGTATGATCAGGGCTTGGTTCAAGCAGTTGGAGTGAGCAACTATGGACCAAAGCAACTGGTGCAATTTTCTTTACTAAGCCTAGGAGACGAACAGTTGGAGACTAAGAAGATATGTGATTCTTTGGGCATCCGCTTAATCGCTTACAGTCCTTTGGGGTTGGGAATGCTTACAGGAAAATACTCACCCTCCAAGCTTCCATCTGGACCTCGGTAA MASSTFTPSFCFRSFTVAASNKASSSSSSSSSSSSSSSPAAFKPLKLPLFWPWQKVKMGPLSVSPMGFGTWAWGNQLLWGYQESMDAELQQIFNLAVENGINLFDTADSYGTGRLNGQSEKLLGKFIRESQEKNDIVIATKFAAYPWRLTPGQFVKACKASLDRMQIEKIGIGQLHWSTANYAPLQEMALWDGLVAMYDQGLVQAVGVSNYGPKQLVQFSLLSLGDEQLETKKICDSLGIRLIAYSPLGLGMLTGKYSPSKLPSGPR Homology
BLAST of Carg26779 vs. NCBI nr
Match: KAG7016801.1 (Pyridoxal reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of Carg26779 vs. NCBI nr
Match: KAG6579301.1 (Pyridoxal reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508.8 bits (1309), Expect = 2.8e-140 Identity = 263/285 (92.28%), Postives = 263/285 (92.28%), Query Frame = 0
BLAST of Carg26779 vs. NCBI nr
Match: XP_023549646.1 (pyridoxal reductase, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 501.1 bits (1289), Expect = 5.8e-138 Identity = 258/285 (90.53%), Postives = 260/285 (91.23%), Query Frame = 0
BLAST of Carg26779 vs. NCBI nr
Match: XP_022922137.1 (pyridoxal reductase, chloroplastic [Cucurbita moschata]) HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137 Identity = 256/285 (89.82%), Postives = 258/285 (90.53%), Query Frame = 0
BLAST of Carg26779 vs. NCBI nr
Match: XP_022974350.1 (pyridoxal reductase, chloroplastic [Cucurbita maxima]) HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137 Identity = 256/285 (89.82%), Postives = 260/285 (91.23%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy Swiss-Prot
Match: Q56Y42 (Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PLR1 PE=1 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 3.2e-107 Identity = 193/273 (70.70%), Postives = 227/273 (83.15%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy Swiss-Prot
Match: Q94A68 (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06690 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.3e-39 Identity = 100/247 (40.49%), Postives = 134/247 (54.25%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy Swiss-Prot
Match: P80874 (Aldo-keto reductase YhdN OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdN PE=1 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17 Identity = 64/215 (29.77%), Postives = 107/215 (49.77%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy Swiss-Prot
Match: P46905 (Uncharacterized oxidoreductase YccK OS=Bacillus subtilis (strain 168) OX=224308 GN=yccK PE=3 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 1.7e-15 Identity = 66/219 (30.14%), Postives = 107/219 (48.86%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy Swiss-Prot
Match: A0A3B1EFQ1 (Aldo-keto reductase str7 OS=Strobilurus tenacellus OX=41251 GN=str7 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.8e-15 Identity = 65/222 (29.28%), Postives = 110/222 (49.55%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy TrEMBL
Match: A0A6J1E2D6 (pyridoxal reductase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430205 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.2e-138 Identity = 256/285 (89.82%), Postives = 258/285 (90.53%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy TrEMBL
Match: A0A6J1IDQ8 (pyridoxal reductase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472975 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137 Identity = 256/285 (89.82%), Postives = 260/285 (91.23%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy TrEMBL
Match: A0A0A0KJR5 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139120 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 9.4e-126 Identity = 236/285 (82.81%), Postives = 245/285 (85.96%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy TrEMBL
Match: A0A5D3C6C2 (Pyridoxal reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00210 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.6e-125 Identity = 235/285 (82.46%), Postives = 246/285 (86.32%), Query Frame = 0
BLAST of Carg26779 vs. ExPASy TrEMBL
Match: A0A1S3AU73 (pyridoxal reductase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482991 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 1.6e-125 Identity = 235/285 (82.46%), Postives = 246/285 (86.32%), Query Frame = 0
BLAST of Carg26779 vs. TAIR 10
Match: AT5G53580.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 389.4 bits (999), Expect = 2.3e-108 Identity = 193/273 (70.70%), Postives = 227/273 (83.15%), Query Frame = 0
BLAST of Carg26779 vs. TAIR 10
Match: AT1G06690.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 164.9 bits (416), Expect = 9.2e-41 Identity = 100/247 (40.49%), Postives = 134/247 (54.25%), Query Frame = 0
BLAST of Carg26779 vs. TAIR 10
Match: AT1G04690.1 (potassium channel beta subunit 1 ) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-14 Identity = 67/230 (29.13%), Postives = 109/230 (47.39%), Query Frame = 0
BLAST of Carg26779 vs. TAIR 10
Match: AT1G04420.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 7.3e-14 Identity = 66/256 (25.78%), Postives = 115/256 (44.92%), Query Frame = 0
BLAST of Carg26779 vs. TAIR 10
Match: AT1G60680.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10 Identity = 61/222 (27.48%), Postives = 105/222 (47.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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