Carg26765 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26765
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein RALF-like 33
Location	Carg_Chr05: 10142050 .. 10142409 (+)
RNA-Seq Expression	Carg26765
Synteny	Carg26765

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGATTCAATTCTCCGACCTTCCTCCTGATCTACGCCACCGTGTTCGTGGTCTTCAGCTTCTCCTCAACCGCCGTCCTCGGAAGCCTCGGGATCCAGCACAGCGTTGCATGGATTCCTAACCAGGCGACCTGCAAGGGCTCCATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTTGATTCCGAAATCAGCCGCCGTATCTTGGCCACCAGTCAGTACATCAGCTACGGCGCTCTGCGGAGGAACACGGTACCTTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCTGGAGCTCAGGCCAATCCCTATACTCGTGGATGCAGCGCCATTACGAGATGCAGGAGTTGA

mRNA sequence

ATGGCAGGATTCAATTCTCCGACCTTCCTCCTGATCTACGCCACCGTGTTCGTGGTCTTCAGCTTCTCCTCAACCGCCGTCCTCGGAAGCCTCGGGATCCAGCACAGCGTTGCATGGATTCCTAACCAGGCGACCTGCAAGGGCTCCATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTTGATTCCGAAATCAGCCGCCGTATCTTGGCCACCAGTCAGTACATCAGCTACGGCGCTCTGCGGAGGAACACGGTACCTTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCTGGAGCTCAGGCCAATCCCTATACTCGTGGATGCAGCGCCATTACGAGATGCAGGAGTTGA

Coding sequence (CDS)

ATGGCAGGATTCAATTCTCCGACCTTCCTCCTGATCTACGCCACCGTGTTCGTGGTCTTCAGCTTCTCCTCAACCGCCGTCCTCGGAAGCCTCGGGATCCAGCACAGCGTTGCATGGATTCCTAACCAGGCGACCTGCAAGGGCTCCATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTTGATTCCGAAATCAGCCGCCGTATCTTGGCCACCAGTCAGTACATCAGCTACGGCGCTCTGCGGAGGAACACGGTACCTTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCTGGAGCTCAGGCCAATCCCTATACTCGTGGATGCAGCGCCATTACGAGATGCAGGAGTTGA

Protein sequence

MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS

Homology

[Close]

BLAST of Carg26765 vs. NCBI nr
Match: XP_023545341.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo] >KAG6599230.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030235.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. NCBI nr
Match: XP_022946251.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 240.4 bits (612), Expect = 8.2e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQA CKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQAICKGSIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. NCBI nr
Match: XP_022999036.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 5.3e-59
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTFLLI ATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLICATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. NCBI nr
Match: KAG6586247.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.8 bits (556), Expect = 2.6e-53
Identity = 107/119 (89.92%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNS TF LI A VFVVFS SSTAV G LGIQHS+ WIPNQ+TCKG+IAECFGGEEFE
Sbjct: 1   MAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 2.6e-53
Identity = 106/119 (89.08%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTF LI A VFV+FS SSTAV   LGI HS+AWIPNQ+TCKGSIAECFGGEEFE
Sbjct: 3   MAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEEFE 62

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 63  FDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 121

[Close]

BLAST of Carg26765 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-30
Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAEC---FGGE 60
           M G ++    +I A + V F F++         Q S  ++P ++ C G+IAEC      E
Sbjct: 1   MRGLSTKPVAIIIAILTVHFLFAAVT------SQSSGDFVPIESKCNGTIAECSLSTAEE 60

Query: 61  EFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRC 119
           EFE DSEI+RRILAT++YISYGALRRNTVPCSRRGASYYNC+ GAQANPY+RGCSAITRC
Sbjct: 61  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of Carg26765 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-30
Identity = 71/114 (62.28%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 10  LLIYATVFVVFSFSSTAV-LGSLGIQHSVAWI---PNQATCKGSIAECFGGEEFEFDSEI 69
           L +  T+ VVF  SS  V  G       VAW     N + C GSIAEC G EE E DSEI
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDSEI 66

Query: 70  SRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           +RRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Sbjct: 67  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg26765 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 66/99 (66.67%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 22  FSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGA 81
           F S A  G  G    V    +   CKGSI EC    EEFE DSE +RRILAT +YISYGA
Sbjct: 17  FISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRILATKKYISYGA 76

Query: 82  LRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           L++N+VPCSRRGASYYNC+PGAQANPY+RGCSAITRCRS
Sbjct: 77  LQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Carg26765 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-28
Identity = 66/124 (53.23%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 12  IYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAEC-------------FG--- 71
           I+A + ++   + +  + S   + +  + P +  C+G+IAEC             +G   
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 72  -GEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAI 119
            GEEFE DSEI+RRILAT +YISYGALRRNT+PCSRRGASYYNC+ GAQANPY+RGCSAI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]

BLAST of Carg26765 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 46  CKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQA 105
           C GSIAEC    EE EFDS+ISRRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GAQA
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 106 NPYTRGCSAITRCR 119
           NPY+RGCS ITRCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]

BLAST of Carg26765 vs. ExPASy TrEMBL
Match: A0A6J1G345 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111450391 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.0e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQA CKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQAICKGSIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. ExPASy TrEMBL
Match: A0A6J1KBV3 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111493547 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTFLLI ATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLICATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of Carg26765 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 107/119 (89.92%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNS TF LI A VFVVFS SSTAV G LGIQHS+ WIPNQ+TCKG+IAECFGGEEFE
Sbjct: 3   MAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEEFE 62

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 63  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 121

[Close]

BLAST of Carg26765 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNS TF LI A VFVVFS SSTAV G LGI HS+ WIPNQ+TCKG+IAECFGGEEFE
Sbjct: 3   MAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEEFE 62

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 63  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 121

[Close]

BLAST of Carg26765 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 103/119 (86.55%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60
           MAGFNSPTF LI A VF++FS SST V   LGIQHS+AWIPNQ+TCKGSIAECFGGEEFE
Sbjct: 3   MAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFE 62

Query: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           FDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPY+RGC+AITRCRS
Sbjct: 63  FDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 121

[Close]

BLAST of Carg26765 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-31
Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 1   MAGFNSPTFLLIYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAEC---FGGE 60
           M G ++    +I A + V F F++         Q S  ++P ++ C G+IAEC      E
Sbjct: 1   MRGLSTKPVAIIIAILTVHFLFAAVT------SQSSGDFVPIESKCNGTIAECSLSTAEE 60

Query: 61  EFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRC 119
           EFE DSEI+RRILAT++YISYGALRRNTVPCSRRGASYYNC+ GAQANPY+RGCSAITRC
Sbjct: 61  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of Carg26765 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-31
Identity = 71/114 (62.28%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 10  LLIYATVFVVFSFSSTAV-LGSLGIQHSVAWI---PNQATCKGSIAECFGGEEFEFDSEI 69
           L +  T+ VVF  SS  V  G       VAW     N + C GSIAEC G EE E DSEI
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDSEI 66

Query: 70  SRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAITRCRS 120
           +RRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Sbjct: 67  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg26765 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 66/124 (53.23%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 12  IYATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAEC-------------FG--- 71
           I+A + ++   + +  + S   + +  + P +  C+G+IAEC             +G   
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 72  -GEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSAI 119
            GEEFE DSEI+RRILAT +YISYGALRRNT+PCSRRGASYYNC+ GAQANPY+RGCSAI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]

BLAST of Carg26765 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 124.0 bits (310), Expect = 8.0e-29
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 46  CKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQA 105
           C GSIAEC    EE EFDS+ISRRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GAQA
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 106 NPYTRGCSAITRCR 119
           NPY+RGCS ITRCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]

BLAST of Carg26765 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-16
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 55  GGEEFEFDSEISRRILATSQ-YISYGALRRNTVPCSRRGASYYNCQPGAQANPYTRGCSA 114
           G  ++  DSE +RR LA  + YISYGALR+N VPCSRRG SYY+C+   +ANPY RGCS 
Sbjct: 42  GELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSV 101

Query: 115 ITRC 118
           IT C
Sbjct: 102 ITHC 105

The following BLAST results are available for this feature:

BLAST of Carg26765 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545341.1	1.7e-60	100.00	protein RALF-like 33 [Cucurbita pepo subsp. pepo] >KAG6599230.1 Protein RALF-lik...	[more]
XP_022946251.1	8.2e-60	99.16	protein RALF-like 33 [Cucurbita moschata]	[more]
XP_022999036.1	5.3e-59	98.32	protein RALF-like 33 [Cucurbita maxima]	[more]
KAG6586247.1	2.6e-53	89.92	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038889183.1	2.6e-53	89.08	protein RALF-like 33 [Benincasa hispida]	[more]

BLAST of Carg26765 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	2.4e-30	58.68	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	5.4e-30	62.28	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	1.6e-29	66.67	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	2.3e-28	53.23	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	1.1e-27	79.73	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Carg26765 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G345	4.0e-60	99.16	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111450391 PE=3 SV=1	[more]
A0A6J1KBV3	2.6e-59	98.32	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111493547 PE=3 SV=1	[more]
A0A6J1FH12	1.2e-53	89.92	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A6J1HQE4	4.7e-53	89.08	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A0A0LFW9	1.8e-52	86.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]

BLAST of Carg26765 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	1.7e-31	58.68	ralf-like 33	[more]
AT1G02900.1	3.8e-31	62.28	rapid alkalinization factor 1	[more]
AT3G16570.1	1.6e-29	53.23	rapid alkalinization factor 23	[more]
AT3G05490.1	8.0e-29	79.73	ralf-like 22	[more]
AT2G33775.1	7.8e-16	60.94	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..118 e-value: 1.1E-30 score: 106.4
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 5..119
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 5..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26765-RA	Carg26765-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region