Carg26729 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26729
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	autophagy-related protein 3-like
Location	Carg_Chr17: 3704377 .. 3710637 (-)
RNA-Seq Expression	Carg26729
Synteny	Carg26729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAACAACCATTACGTCTCTTCTCAGTCTTCTCCCCATTGAAGGGAATTTCGTTGGTCGATCATAGTCAAGATTCTGCTGGGGCTTCCCAATTCCTGGTTCAATTTCCGAAATCTTTCATCTTAATTCATCAATTTCAGAGAGCTTGCGATCATGGCTTTGTCGCAGAAGCTCCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACAGGGCCTCGAACCGTCTCCGCCTTCAAAGAGAAAGGCGTTCTCAGTGTCTCTGAGTTCATCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGTATTTTCATGTGATTTCTCTCAATTTCGATGATCGATTTTGTTGATTCGTTATTCTGCGATGTTCCAAATTGTTGGAAGATTTTATATGCTCACCAATTTATATCGATTCTCTTTTCTGAATCCTGTCAATTTTGTTGATTCTGTTTTCGAAAACAGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTAAGGTCAATTGGTCTGTGTTGGACTGTAAGCCTTTCATTGTAGACTTTGATGAAGAAGTACAGTTATCTCTGTTTTAGTGGATGGTAGAGCTTTGGAATAGTTGGGAAAAAACCTTAATGTCCTTTCAATCAGGAGTTCTTCAGAGAGCTTAAGAGGAGAGGGGTAAATAGGGGTACGTAGAAGGGACATTAAATCATTGGTTTTTCTTATGTTTCTGAAATTATTTCTACGACCTTCTTTGAGAAGCAAGTTGGTGATTTGTTTTGAAGTATAACATCTATTGGGACAAAATTAGAGTAGAAACAATAGCTTCTGGTCGGACTTACTTTCAGGTTCTTCATAGCTTTGAAGGACAGTCGTTGCTGAAGATTGTTGGTTGAGAGTCTCACATTGACTAATTTAGGAAATGATCATGGGTTTATAAGTAAGGAGTACATCTCCATTGATATGAGGTCTTTTGGGAAAGCCCAAAGCAAAGCCATGAGAACTTATGCTCAAAGTGGACAATATTCATACCATTGTGGAGATTCGTTATTCCTAACTGTCTTTCACCCAAAATTTCACTATCCAATGTATACTACGTTCCGTCCTTATCCCTTTTTCAGCAAAGGACAATGTGGGTCTGTCCACAATCCCATGAAAACTGATATTAGTGGCTCACTTGTAAAATTGTACCTTTTATTTTCTTGCCTCCTCTACTCATTTTGTTCCTTAAGTTTTGGGAGTGTTTTAAATTCGTCTATTATGTGTTAAAATGTATTTTCCTTCATGATTTTAGGGAGTCAGGTGATATAAACAAGAGGAAATCTTACTTGCCTCCTGATAAGCAGTTCTTGATTACCAGAAACGGTATAACAGCACCATCATTAATGTCATTGTTTTATTGTAATCTTGGCGTAATAGACATCAACTTTGTTGAGTCATTATCGAAACTAAGGATGATTGTTCACTTTGTTTCCAGTTCCTTGCCTGCGTCGGGCTGCCTCTGTAGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACGCACGGGAAACCAAAGGGTACCTTTATCTTTCAGTTTGAAACTAGGTATTTACATTTGGTAAATAACATGTGCTCTTTCATGCAGAAGAAAAAAGTGATGAAGAGGAAAATTTGCCTTCCCTGGAAACTCTTGAAATCAGCAGGCCCAAGGTTGTTAAGTCAATTCCAAACTATTTTGGTGGTGAAGATGAAGAGGATATTCCTGACCTGGCTGATATTGAAGATACTGACAATGTTATTGGAACTGATGCAGTACGTAAATTTTATGATTTGCAAGTTTATGAGCATATGTGGCTTGAAAGTAGAGATGTCCACAAGGTGGGGACGGCAAACTATCCCCACCACCTGTGAAATTCTCATTCCTGTGAAATTCTCCATTTATTTTTGCGGAGATTGGGTTTTCCGGGGGAAAATTTTCTCCATTTTTTAATTTATTCATTTGAAAAGATTTTTTAATGGATAATTTCCATTTTTCAATATAAGTTCTATTAAAAAAATGTAAAACATTCTAATAAATTCAATAATATTTCATATGCAAAAATATAATATATTGTTCTAACACTTAAAAAAAAAAATCTTCCCGTTTAGCTTAGAGTAAGAAATCTCTCCTCGCCTCCTTTTTCCCTTCTTCGTGGTTAAATAGACATCTCTACTTGAAAGTATTGAGCTTTATAAAAGACACCCCCCTCCACACAAAAACAGAAGTTTCAGCTTGACTCAACTGTTGCAAGTTTGAGTTAAAAATCCATGCTCTCTTATTTTGCAAGGCATGGAATGGGGGCAATAATCTGGATCCTTTCTGTGGTATCTCATCTTGAAAAATATCTCTTGGTTTTCATAAAGAAAGTTCTTGGTTCATTTGTATCATACACATAATAACCATTTGGGATTAAAAAAATCCTTATGCTCACATCCATCACAGTTGTATTTTGATGAGGTACTCATGTTTACATTTACTTCTTCATTGTAGGCCACTCTGCCATTGACCTACCAAATTGCCCATGAACCTGACGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTAAGGCGACTTCTTCTGTTGTTCTTCTTGCTTTTATATATATATATTTGTATTTTTAATTTTATATACATATATATATAATTCTTAAAAACAATAATGTATAATGTATTGAATAAAAATATATCAAAGTTCATGGGTTGGTAGGAAAGAATCCTTGTGTCCAGCCAAACAAGCAAGAAGATGCAATTGGAGTAAGCAACACTAGAGGGTGGTTAAAAATTTCTTAGGAATGGACACCCCAATATGAAACTTGAATTGTAGTACAATTCGAGATCTCCCGGAAAAATTCCTGTCTATGAATTGCTCCACTTTTTTCTTCTCCCAAATCTCCAAAGTACTGCAAGGACTATAGTAATCCGAAGAATCTTTTCTTGGGAGGAGGAGGAGGAGGGGGAAGGGGGAGTTCAGACAGCCTAAATGCAGGTTACTTTCTGTTTGCTTTTTGTAGAAAAGGTAGTTATTATTAAGAATTTTAGGTAATAATTATTAGGTTCATTATTTGGAGCATTGGGGCATTACTTAGGGAATCGAGTCCTTGCCATTTTCTCGAGTAGAAAATTATCATAGATGCACCTGACTCTTACGGATTAGGAAGTGCGCAGGTTTATGGCCTAGGATCGTAAGGGCAACCAATTCCATCGTTTAGTGTTCTTCTAGAGTCCCAATCTTCTCGATTTTCTGGTTATAACAGCTTGTCATATTTGTGATAACTCTTAAGGGTTAGGTATATAAGTAAATGTTTGTGGCTTAACCTTTGTGGTCCTCTTAAAATCTTCAAAATTAGGCGTACTGGTAGTGATCTTGGCTTCAACCTGAGTGGTCCTGGCTATAAAGTCCTTTGGGGTTATGGTAAATCTCAGATTAAATTTAAAACCTACCGAGTATCAAGGACTCGAGAATTCTTGTTGTCGAAAGAAGTTTTAGCTTTCCATCTGACTTTTCCTGATGATTACTGTAGTTCATTAAGTTTTACCAATAGCATATGAGAGAACTATATTAATACAAGTAGGGAATAGCCATAGAAAAAGAATATACTAAAATTATATTTGTTATAGCTAATTGTATGGTACCATGTATTTTTGGGAGGAAAACTTGTGTCATGTCGTGTGATCTAAAATAAGGAGATTCGTTTATGTTCTATAATTACGCTTTTTAGACTGTCAGAGAAAAGTTAACTAAAAGTCTGAAAATTATGCTATTTTTCTACCATATCAGGTATGATAAATATTACCAGACACCACGCGTTTGGCTTACAGGATATGACGAGGTTTGTGTTTGTATTCTTCTTCAATTCTTAGTTTCTGGGGGAACTTTGGATCTTATACATCAAATCACTATGCATTCATTTACTAAGACGTTTGAATTAAGGCCAGTATCTTAAGTTTGGGTGTCTATTTTTCTAGTAATGAATGGCATATCAACCAACAATCCATGTTGTAAGATACCTTCGGTATAAACAGACTTCCTTTATATCTTCAGATTTATTCTTTTATCTTGTTCCTTAATTATTTATGTGTCTGTCTCTTGGTATTGAAGTATTGATATACTGTACTGCTCCCTATGATCAACTCGACATTGCTGACACTGCTTCGATTTCTTAGAGTTTTCTTGCTATGTAAACAATAGAATATAACTTTTTTACAATAGGCAGCATTTTTTTTTTTTTTTTTTTTCTATTACTATGCAACTTCTTTTAATGCTTGTTTACTCAACTTCTATTAGCACACGCATATTTAAATCATTGTTGTACTATTTCAGTCAAGGATGCTCTTACAGCCAGAATTTGTACTTGAAGATGTTAGTCAAGATCATGCACGAAAAACGGTATGTTGTGAATATGTAATAGTGTAGTTGTGCCATCTGCAATAGATTGATCCTGTTATGAGGCCCATCATTTATTCTATATTATTTTCAGTTGAACCGTATGCTTAGGATTGATTCGTTGTACCTTTTGTTATGCCACGCTGTTCAAAGAAAAGAGGTAAAAGAACATTAAAAATCGAGAATTAGCTCTTACATCCAAATTCGAGACTTTATGAAATCTGAGAACTTGAACATAACGAACACACACAAAAGGAAGAAGGAAAGCAACTTCTTTGTTAGCACTAAGCTTTGCCTTTGCCCTCTTTATACAAGTTCCTCAACTTCATCTTCGTTATCCTATGAAACGTATCTCAAGTTCTGCAGCTAAAAAATCAAAATGACGACGACTGTAAACAATAGTAACTCACATCATATCCAGAAAGGAAGGCTCGGCAATTAAAACATAATATTTTCACGATACTTTTTAGGTGAAGTGAGAGTTCGAAAGAATAACCAACACCCAACACCCAATCTATAACACAAATGTATGGTTGGATTAGGTTCATCAACTGGATCGTCATTTTAAGTTCAAGTTCTCATATTTTATGAATTGTCGAATCTGGATCCTTTTGTTTACGATAATACAAAATTTTGATGCTTTAGATGACCAACAAGAATCTCTTTTAGATGTCGTATGTTGAACTCATATCAGGGAGTCTGGAGGACCCATGCATTTGTTTTGTTGTCTACATATTTGTTCATCCAAAAGTGTCATGTGGAACATGATTTTCCAATTATGCTTTAAATTCAATCTCTGGGATACAGGTGACAATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACATGGGGCTGTGATGAAAAAGATCATTGATGTGTTAATGTCTCGAGGCGTAGAACCCGAAGTTCACAAGTACGTTAAACTTTATTTAGAACAGCAGATCTAGTTTTGGAGACCGGCTATGGTAGTTCCTGACCAAGCATCTCAAGCTCTTCTACTTATTAATTTATTTCTTCCATTTTTTTTGTAGGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCAACTATCGAATATGATTACACTATGGACTTCGATCTTGGCGGCCCTAGCAGTCGATAACTGGGATTGATAAGCATTGTGAGCACATCCGGGTCATAGTTCCTTTTCAGCTTCCAGCATCCATCTTAAATTCATGCTTGTGTACATCAAAATTGCTGCGGATTCTTCTTTTTAGCATTATTTATTGGAGCTTTATTTTGGGTCAAGTAAATTGCATGTACAGATTATGTAGTCTCTTTTCTTAGTACTATTTTCTATCTTGCCTACATTGGTTTTAGACTGTAAATTTGTTGATTTTTTAGCTATTTCCTCTCGTAGAGACACTGAATTGTTTGCACTCCTTAACTATGTTCTTGCTCATGATAAAGATAATTCGTGTATTAGTAGCACTACTATGAGTAGGAACATTTTGATACATGACTCATTGATATAGCATGCTGGTATAAGTTTCCATTCTACGAACGTCGATAATAGACTGCCATTTCCGTACTGCTCTGATTTTCGTTACTCGAATCCAGCCTGACGTTTTGAACATGTTTGAGCGATGCAGATCGGATTGTACGTAAGTGTGGGATATTTCACATCTGTTGTTTCTGCAAATACAGGCCGACCCTCAGCTTCGTGTACATACACAACCTGGGGTCTAAACGGTACCTCTCTGGATATATATTGTCTTTTGGAAGTGTAGGTCTTGCCCTTGCTTTCTGTCAGTCTTAGTTT

mRNA sequence

TAAAAACAACCATTACGTCTCTTCTCAGTCTTCTCCCCATTGAAGGGAATTTCGTTGGTCGATCATAGTCAAGATTCTGCTGGGGCTTCCCAATTCCTGGTTCAATTTCCGAAATCTTTCATCTTAATTCATCAATTTCAGAGAGCTTGCGATCATGGCTTTGTCGCAGAAGCTCCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACAGGGCCTCGAACCGTCTCCGCCTTCAAAGAGAAAGGCGTTCTCAGTGTCTCTGAGTTCATCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGGAGTCAGGTGATATAAACAAGAGGAAATCTTACTTGCCTCCTGATAAGCAGTTCTTGATTACCAGAAACGTTCCTTGCCTGCGTCGGGCTGCCTCTGTAGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACGCACGGGAAACCAAAGGAAGAAAAAAGTGATGAAGAGGAAAATTTGCCTTCCCTGGAAACTCTTGAAATCAGCAGGCCCAAGGTTGTTAAGTCAATTCCAAACTATTTTGGTGGTGAAGATGAAGAGGATATTCCTGACCTGGCTGATATTGAAGATACTGACAATGTTATTGGAACTGATGCAGCCACTCTGCCATTGACCTACCAAATTGCCCATGAACCTGACGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTACCAGACACCACGCGTTTGGCTTACAGGATATGACGAGTCAAGGATGCTCTTACAGCCAGAATTTGTACTTGAAGATGTTAGTCAAGATCATGCACGAAAAACGGTGACAATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACATGGGGCTGTGATGAAAAAGATCATTGATGTGTTAATGTCTCGAGGCGTAGAACCCGAAGTTCACAAGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCAACTATCGAATATGATTACACTATGGACTTCGATCTTGGCGGCCCTAGCAGTCGATAACTGGGATTGATAAGCATTATCGGATTGTACGTAAGTGTGGGATATTTCACATCTGTTGTTTCTGCAAATACAGGCCGACCCTCAGCTTCGTGTACATACACAACCTGGGGTCTAAACGGTACCTCTCTGGATATATATTGTCTTTTGGAAGTGTAGGTCTTGCCCTTGCTTTCTGTCAGTCTTAGTTT

Coding sequence (CDS)

ATGGCTTTGTCGCAGAAGCTCCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACAGGGCCTCGAACCGTCTCCGCCTTCAAAGAGAAAGGCGTTCTCAGTGTCTCTGAGTTCATCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGGAGTCAGGTGATATAAACAAGAGGAAATCTTACTTGCCTCCTGATAAGCAGTTCTTGATTACCAGAAACGTTCCTTGCCTGCGTCGGGCTGCCTCTGTAGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACGCACGGGAAACCAAAGGAAGAAAAAAGTGATGAAGAGGAAAATTTGCCTTCCCTGGAAACTCTTGAAATCAGCAGGCCCAAGGTTGTTAAGTCAATTCCAAACTATTTTGGTGGTGAAGATGAAGAGGATATTCCTGACCTGGCTGATATTGAAGATACTGACAATGTTATTGGAACTGATGCAGCCACTCTGCCATTGACCTACCAAATTGCCCATGAACCTGACGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTACCAGACACCACGCGTTTGGCTTACAGGATATGACGAGTCAAGGATGCTCTTACAGCCAGAATTTGTACTTGAAGATGTTAGTCAAGATCATGCACGAAAAACGGTGACAATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACATGGGGCTGTGATGAAAAAGATCATTGATGTGTTAATGTCTCGAGGCGTAGAACCCGAAGTTCACAAGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCAACTATCGAATATGATTACACTATGGACTTCGATCTTGGCGGCCCTAGCAGTCGATAA

Protein sequence

MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDINKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKSDEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYDYTMDFDLGGPSSR

Homology

[Close]

BLAST of Carg26729 vs. NCBI nr
Match: KAG7013823.1 (Autophagy-related protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.4 bits (1661), Expect = 5.0e-181
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSSR
Sbjct: 301 YDYTMDFDLGGPSSR 315

[Close]

BLAST of Carg26729 vs. NCBI nr
Match: XP_022959442.1 (autophagy-related protein 3-like [Cucurbita moschata] >XP_022959443.1 autophagy-related protein 3-like [Cucurbita moschata] >XP_022959444.1 autophagy-related protein 3-like [Cucurbita moschata])

HSP 1 Score: 642.1 bits (1655), Expect = 2.5e-180
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSSR
Sbjct: 301 YDYTMDFDLGGPSSR 315

[Close]

BLAST of Carg26729 vs. NCBI nr
Match: XP_022974286.1 (autophagy-related protein 3-like [Cucurbita maxima] >XP_022974287.1 autophagy-related protein 3-like [Cucurbita maxima] >XP_022974288.1 autophagy-related protein 3-like [Cucurbita maxima])

HSP 1 Score: 641.0 bits (1652), Expect = 5.5e-180
Identity = 313/315 (99.37%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGP+SR
Sbjct: 301 YDYTMDFDLGGPTSR 315

[Close]

BLAST of Carg26729 vs. NCBI nr
Match: XP_023521024.1 (autophagy-related protein 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.0 bits (1647), Expect = 2.1e-179
Identity = 312/315 (99.05%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPD+DNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDNDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVH+YLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHRYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSSR
Sbjct: 301 YDYTMDFDLGGPSSR 315

[Close]

BLAST of Carg26729 vs. NCBI nr
Match: XP_008459789.1 (PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED: autophagy-related protein 3 [Cucumis melo] >KAA0039782.1 autophagy-related protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.3e-176
Identity = 303/315 (96.19%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGD+N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLE LEISR KVVKSIPNYFGGEDE+D+PDL DIE+TDNV+GTDAATLPLTYQ
Sbjct: 121 DEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSS+
Sbjct: 301 YDYTMDFDLGGPSSQ 315

[Close]

BLAST of Carg26729 vs. ExPASy Swiss-Prot
Match: Q0WWQ1 (Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2)

HSP 1 Score: 544.3 bits (1401), Expect = 9.2e-154
Identity = 258/314 (82.17%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEF++AGDNLVSKCPTWSWESGD +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRK YLP DKQFLITRNVPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK +K 
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPK-DKG 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
            EE+NLPS++ L+I+    ++SIP YFGGE+++DIPD+ + ++ DNV+  D ATL  TY 
Sbjct: 121 KEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYL 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPE V+EDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKF+ASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE 300

Query: 301 YDYTMDFDLGGPSS 315
           YDYTMDFDLG  S+
Sbjct: 301 YDYTMDFDLGSSST 313

[Close]

BLAST of Carg26729 vs. ExPASy Swiss-Prot
Match: Q550A8 (Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV=3)

HSP 1 Score: 291.2 bits (744), Expect = 1.4e-77
Identity = 154/334 (46.11%), Postives = 210/334 (62.87%), Query Frame = 0


Query: 2   ALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDINK 61
           +  Q +H+A+  TVE++T   + S F E+GVL+  EF+ AGD L  KC TW+WESGD ++
Sbjct: 4   SFQQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSR 63

Query: 62  RKSYLPPDKQFLITRNVPCLRRAASVEEEYEAA-GGEVLLDNEDGDGWLATHGKPKEEKS 121
             SYLP +KQFL+TRNVPC  R  ++E E +A+   E+ ++++  D W+A      ++  
Sbjct: 64  NVSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAPQPVGNQDDI 123

Query: 122 DEE----------ENLPSLETLEISRPKVVKSIPNYFGGEDEE-DIPDLADIEDTDNVIG 181
           ++E          +  P+  T   ++P    +  N    EDE+ DIPDL D +D + +  
Sbjct: 124 EDEKVDISSLKIDDKKPNTTTTTTAKPTNNNNNNNDDEDEDEDGDIPDLDDFQDDNIIEE 183

Query: 182 TDAATL-----PLTYQIAHE----------PDDDNILRTRTYDVSITYDKYYQTPRVWLT 241
            D A L       T   A+            D+DNILRTRTYD+SITYDKYYQTPRVWL 
Sbjct: 184 EDPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDISITYDKYYQTPRVWLF 243

Query: 242 GYDESRMLLQPEFVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMS 301
           GYDE+R  L+PE + ED+S+DHA KTVTI+ HPHL    A +HPCRH AVMKK++D    
Sbjct: 244 GYDENRKPLKPEEIFEDISEDHAHKTVTIDSHPHLGISFAYIHPCRHAAVMKKLVDRQSE 303

Query: 302 RGVEPEVHKYLFLFLKFVASVIPTIEYDYTMDFD 309
            G EP V +YLFLFLKF++ VIPTIEYD+T++FD
Sbjct: 304 NGKEPRVDQYLFLFLKFISVVIPTIEYDFTLEFD 337

[Close]

BLAST of Carg26729 vs. ExPASy Swiss-Prot
Match: Q9CPX6 (Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-66
Identity = 144/307 (46.91%), Postives = 191/307 (62.21%), Query Frame = 0


Query: 16  ERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDINKRKSYLPPDKQFLIT 75
           E +T     S FKE GV++  EF+ AGD+LV  CPTW W +G+  K K+YLP DKQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVT 76

Query: 76  RNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH---GKPKEEKSDEEENLPSLET 135
           +NVPC +R   +E   E    E +++ +DGD GW+ T+   G     ++ +E  L S ++
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDS 136

Query: 136 LEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTD--NVIGTDAATLPLTYQI------AH 195
           +++      +        EDEED  + AD+E+ +   ++ TD ATL     +      A 
Sbjct: 137 IKL------QDCSALCDEEDEEDEGEAADMEEYEESGLLETDEATLDTRKIVEACKAKAD 196

Query: 196 EPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKTVTI 255
              +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  E + ED+SQDH +KTVTI
Sbjct: 197 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTI 256

Query: 256 EDHPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYD 310
           E+HPHL P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEYD
Sbjct: 257 ENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYD 314

[Close]

BLAST of Carg26729 vs. ExPASy Swiss-Prot
Match: Q6PFS7 (Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio OX=7955 GN=atg3 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-66
Identity = 143/307 (46.58%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 13  GTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDINKRKSYLPPDKQF 72
           G  E +T     S FKE GV++  EF+ AGD+LV  CPTW W SG+  K K YLP DKQF
Sbjct: 14  GVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPNDKQF 73

Query: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATHGKPKEEKSDEEENLPSLET 132
           L+TRNVPC +R   +E   E    E +++ +DGD GW+ T          E     SL+ 
Sbjct: 74  LLTRNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTFHNSGVTGVTEAVREISLDN 133

Query: 133 LEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTD--NVIGTDAATL------PLTYQIAH 192
            +     V        G +D+++  + AD+E+ +   ++ TD ATL       L+   A 
Sbjct: 134 KDNMNMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLLETDDATLDTSKMADLSKTKAE 193

Query: 193 EPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKTVTI 252
              +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  + + ED+SQDH +KTVTI
Sbjct: 194 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDHVKKTVTI 253

Query: 253 EDHPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYD 310
           E+HP+L P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEYD
Sbjct: 254 ENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYD 313

[Close]

BLAST of Carg26729 vs. ExPASy Swiss-Prot
Match: Q6AZ50 (Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.6e-65
Identity = 142/307 (46.25%), Postives = 191/307 (62.21%), Query Frame = 0


Query: 16  ERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDINKRKSYLPPDKQFLIT 75
           E +T     S FKE GV++  EF+ AGD+LV  CPTW W +G+  K K+YLP  KQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76

Query: 76  RNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH---GKPKEEKSDEEENLPSLET 135
           +NVPC +R   +E   E    E +++ +DGD GW+ T+   G     ++ +E  L S ++
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDS 136

Query: 136 LEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTD--NVIGTDAATLPLTYQI------AH 195
           +++    V+         E+EE+  + AD+E+ +   ++ TD ATL     +      A 
Sbjct: 137 IKLQDCSVL------CDEEEEEEEGEAADMEEYEESGLLETDEATLDTRRIVEACKAKAD 196

Query: 196 EPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKTVTI 255
              +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  E + ED+SQDH +KTVTI
Sbjct: 197 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTI 256

Query: 256 EDHPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYD 310
           E+HPHL P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEYD
Sbjct: 257 ENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYD 314

[Close]

BLAST of Carg26729 vs. ExPASy TrEMBL
Match: A0A6J1H4I9 (autophagy-related protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460417 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.2e-180
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSSR
Sbjct: 301 YDYTMDFDLGGPSSR 315

[Close]

BLAST of Carg26729 vs. ExPASy TrEMBL
Match: A0A6J1IFS6 (autophagy-related protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472923 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.7e-180
Identity = 313/315 (99.37%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGP+SR
Sbjct: 301 YDYTMDFDLGGPTSR 315

[Close]

BLAST of Carg26729 vs. ExPASy TrEMBL
Match: A0A1S3CAI3 (autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.0e-176
Identity = 303/315 (96.19%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGD+N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLE LEISR KVVKSIPNYFGGEDE+D+PDL DIE+TDNV+GTDAATLPLTYQ
Sbjct: 121 DEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSS+
Sbjct: 301 YDYTMDFDLGGPSSQ 315

[Close]

BLAST of Carg26729 vs. ExPASy TrEMBL
Match: A0A5A7T8K5 (Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00500 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.0e-176
Identity = 303/315 (96.19%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGD+N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLE LEISR KVVKSIPNYFGGEDE+D+PDL DIE+TDNV+GTDAATLPLTYQ
Sbjct: 121 DEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDAATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSS+
Sbjct: 301 YDYTMDFDLGGPSSQ 315

[Close]

BLAST of Carg26729 vs. ExPASy TrEMBL
Match: A0A0A0KDT1 (Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104635 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.5e-175
Identity = 302/315 (95.87%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGD+N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEK 
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
           DEEENLPSLETLEISR KVVKSIPNYFGGEDE+D+PDL DIE+TDNV+GTD ATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPE VLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 301 YDYTMDFDLGGPSSR 316
           YDYTMDFDLGGPSS+
Sbjct: 301 YDYTMDFDLGGPSSQ 315

[Close]

BLAST of Carg26729 vs. TAIR 10
Match: AT5G61500.1 (autophagy 3 (APG3) )

HSP 1 Score: 544.3 bits (1401), Expect = 6.6e-155
Identity = 258/314 (82.17%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60
           M LSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEF++AGDNLVSKCPTWSWESGD +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60

Query: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120
           KRK YLP DKQFLITRNVPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK +K 
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPK-DKG 120

Query: 121 DEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLTYQ 180
            EE+NLPS++ L+I+    ++SIP YFGGE+++DIPD+ + ++ DNV+  D ATL  TY 
Sbjct: 121 KEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYL 180

Query: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPEFVLEDVSQDHARKT 240
           +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPE V+EDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKT 240

Query: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKF+ASVIPTIE
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE 300

Query: 301 YDYTMDFDLGGPSS 315
           YDYTMDFDLG  S+
Sbjct: 301 YDYTMDFDLGSSST 313

The following BLAST results are available for this feature:

BLAST of Carg26729 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013823.1	5.0e-181	100.00	Autophagy-related protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022959442.1	2.5e-180	99.68	autophagy-related protein 3-like [Cucurbita moschata] >XP_022959443.1 autophagy-...	[more]
XP_022974286.1	5.5e-180	99.37	autophagy-related protein 3-like [Cucurbita maxima] >XP_022974287.1 autophagy-re...	[more]
XP_023521024.1	2.1e-179	99.05	autophagy-related protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_008459789.1	8.3e-176	96.19	PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED:...	[more]

BLAST of Carg26729 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWQ1	9.2e-154	82.17	Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2	[more]
Q550A8	1.4e-77	46.11	Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV...	[more]
Q9CPX6	1.5e-66	46.91	Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=...	[more]
Q6PFS7	3.3e-66	46.58	Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio OX=7955 GN=atg3 PE=2 SV=1	[more]
Q6AZ50	3.6e-65	46.25	Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=...	[more]

BLAST of Carg26729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4I9	1.2e-180	99.68	autophagy-related protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460417 P...	[more]
A0A6J1IFS6	2.7e-180	99.37	autophagy-related protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472923 PE=...	[more]
A0A1S3CAI3	4.0e-176	96.19	autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=4 SV=1	[more]
A0A5A7T8K5	4.0e-176	96.19	Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0KDT1	1.5e-175	95.87	Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G10...	[more]

BLAST of Carg26729 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61500.1	6.6e-155	82.17	autophagy 3 (APG3)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PFAM	PF03987	Autophagy_act_C	coord: 37..303 e-value: 8.5E-65 score: 218.6
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PANTHER	PTHR12866	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 2..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..126
None	No IPR available	PANTHER	PTHR12866:SF2	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 2..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26729-RA	Carg26729-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0000422	autophagy of mitochondrion
biological_process	GO:0044804	autophagy of nucleus
cellular_component	GO:0000153	cytoplasmic ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0019776	Atg8 ligase activity
molecular_function	GO:0019787	ubiquitin-like protein transferase activity