Carg26702 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26702
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PLATZ transcription factor family protein
Location	Carg_Chr17: 2965165 .. 2966109 (+)
RNA-Seq Expression	Carg26702
Synteny	Carg26702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGTTCATTAATACTTCTTCTTCTTCTTCTTCTTCTTCACCAATTAATCACTTCTAAACCCTATACTCTGTTTCTTCTTCTTGCAGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGGTCAATTCTCAACCCATTTTCTTCAATACCCATTTCCCTCTTCTTTCTTTCTTAATTCCTTTTTCGTTGTTCTTCAGATTAGGCGTTATGTGTACCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAAGTATGTTCTTGATTGAGTTTGCAGAAACAGAGTGATTTTATTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTAGTTTTATTCTTTATCTTAATTGGGTTTGCAGAAACAGAGTGATCTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGATTTGCAGAAACAGAGTAATTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTTGAAGAAACAGAGTAATTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTGTTGTTTTTGGTTGGTTGATTTAGTCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAG

mRNA sequence

ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTACCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAG

Coding sequence (CDS)

ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTACCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAACCAAAGGCCACAGACCAGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAG

Protein sequence

MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDPYLFCSLSCK

Homology

[Close]

BLAST of Carg26702 vs. NCBI nr
Match: XP_022959264.1 (uncharacterized protein LOC111460295 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 1.7e-71
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. NCBI nr
Match: KAG7013781.1 (hypothetical protein SDJN02_23948, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 1.7e-71
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. NCBI nr
Match: KAG6575216.1 (Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.3 bits (713), Expect = 1.7e-71
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. NCBI nr
Match: XP_023548824.1 (uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.9 bits (707), Expect = 8.7e-71
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. NCBI nr
Match: XP_023006650.1 (uncharacterized protein LOC111499311 [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 7.3e-70
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-45
Identity = 79/126 (62.70%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+ +RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 125 CSLSCK 131
           CSL CK
Sbjct: 126 CSLGCK 130

[Close]

BLAST of Carg26702 vs. ExPASy TrEMBL
Match: A0A6J1H7K0 (uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC111460295 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.4e-72
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. ExPASy TrEMBL
Match: A0A6J1L0Q7 (uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-70
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCSLSCK
Sbjct: 121 PYLFCSLSCK 130

[Close]

BLAST of Carg26702 vs. ExPASy TrEMBL
Match: A0A0A0KCM1 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCS+SCK
Sbjct: 121 PYLFCSVSCK 130

[Close]

BLAST of Carg26702 vs. ExPASy TrEMBL
Match: A0A1S3C8E3 (uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PYLFCS+SCK
Sbjct: 121 PYLFCSVSCK 130

[Close]

BLAST of Carg26702 vs. ExPASy TrEMBL
Match: A0A6J1KHE0 (uncharacterized protein LOC111494393 OS=Cucurbita maxima OX=3661 GN=LOC111494393 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M++LPIWLQALL+ KFFNACVLHE AKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRR
Sbjct: 1   MYALPIWLQALLSEKFFNACVLHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDA KLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCK 131
           PY FCSLSCK
Sbjct: 121 PYHFCSLSCK 130

[Close]

BLAST of Carg26702 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 201.8 bits (512), Expect = 3.3e-52
Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL+ LL  KFFNAC+ HE  KKNEKNI C DC L ICPHCLSSH+SH+LLQIRRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+R++D +KL+DC+ +Q YTTNS+KVVF+N+RPQ+R FRG SGN+C TCDRSLQ PYLF
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRG-SGNICITCDRSLQSPYLF 126

Query: 125 CSLSCK 131
           C LSCK
Sbjct: 127 CCLSCK 131

[Close]

BLAST of Carg26702 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.5e-46
Identity = 79/126 (62.70%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+ +RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 125 CSLSCK 131
           CSL CK
Sbjct: 126 CSLGCK 130

[Close]

BLAST of Carg26702 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 174.9 bits (442), Expect = 4.3e-44
Identity = 78/130 (60.00%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M + P WL+ L+   FF++C +HE  +K+EKN+FC  C L +CPHCL SH SH LLQ+RR
Sbjct: 15  MATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRR 74

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDV+RL D  KLIDC++VQ YT N AKV+FLNQR Q+R     S N+C TCDR LQ+
Sbjct: 75  YVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR--AKVSSNVCFTCDRILQE 134

Query: 121 PYLFCSLSCK 131
           P+ FCSLSCK
Sbjct: 135 PFHFCSLSCK 142

[Close]

BLAST of Carg26702 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31
Identity = 66/127 (51.97%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLG-ICPHCLSSHSSHKLLQIRRYVY 64
           P WL+ LL  KFF  C LH  + K+E N++C DC+ G +C  CLS H  H  +QIRR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 65  HDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDPYL 124
           HDVIR+ +  K +D   VQ+Y  NSAKVVFLN+RPQ R  +G   N C  C RSL D + 
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVI-NTCEVCYRSLVDSFR 131

Query: 125 FCSLSCK 131
           FCSL CK
Sbjct: 132 FCSLGCK 137

[Close]

BLAST of Carg26702 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 62/134 (46.27%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 6   IWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLS----SHSSHKLLQIRRY 65
           +W++ LL  +FF  C+ H++ +KNEKN+FC DC++ IC HC +    SH  H+ LQI +Y
Sbjct: 12  VWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQICKY 71

Query: 66  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGS----SGNLCSTCDRS 125
           VY DVIRL +     DC+ +Q+Y  N  K + LN RPQ ++ R S    +G  C TC R 
Sbjct: 72  VYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTCKRY 131

Query: 126 LQD-PYLFCSLSCK 131
           +QD P LFCS+SCK
Sbjct: 132 IQDHPNLFCSISCK 145

The following BLAST results are available for this feature:

BLAST of Carg26702 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959264.1	1.7e-71	100.00	uncharacterized protein LOC111460295 [Cucurbita moschata]	[more]
KAG7013781.1	1.7e-71	100.00	hypothetical protein SDJN02_23948, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575216.1	1.7e-71	100.00	Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548824.1	8.7e-71	99.23	uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo]	[more]
XP_023006650.1	7.3e-70	98.46	uncharacterized protein LOC111499311 [Cucurbita maxima]	[more]

BLAST of Carg26702 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	5.0e-45	62.70	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg26702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7K0	8.4e-72	100.00	uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1L0Q7	3.5e-70	98.46	uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311...	[more]
A0A0A0KCM1	3.7e-67	95.38	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 ...	[more]
A0A1S3C8E3	3.7e-67	95.38	uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=...	[more]
A0A6J1KHE0	1.2e-65	93.08	uncharacterized protein LOC111494393 OS=Cucurbita maxima OX=3661 GN=LOC111494393...	[more]

BLAST of Carg26702 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60670.1	3.3e-52	71.43	PLATZ transcription factor family protein	[more]
AT2G12646.1	3.5e-46	62.70	PLATZ transcription factor family protein	[more]
AT1G31040.1	4.3e-44	60.00	PLATZ transcription factor family protein	[more]
AT1G32700.1	5.5e-31	51.97	PLATZ transcription factor family protein	[more]
AT2G01818.1	1.2e-30	46.27	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 59..130 e-value: 1.5E-26 score: 92.8
None	No IPR available	PANTHER	PTHR31065:SF78	SUBFAMILY NOT NAMED	coord: 5..130
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 5..130
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 15..61
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 20..58 score: 9.10072

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26702-RA	Carg26702-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding